HEADER CELL ADHESION 07-NOV-09 3KLD TITLE PTPRG CNTN4 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: CONTACTIN 4; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: IG DOMAINS 1-4 (UNP RESIDUES 25-404); COMPND 5 SYNONYM: AXCAM, BIG-2; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE GAMMA; COMPND 9 CHAIN: B; COMPND 10 FRAGMENT: CARBONIC ANHYDRASE-LIKE DOMAIN (UNP RESIDUES 55-320); COMPND 11 SYNONYM: PROTEIN-TYROSINE PHOSPHATASE GAMMA, R-PTP-GAMMA; COMPND 12 EC: 3.1.3.48; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: CNTN4; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PSGHP1; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 13 ORGANISM_COMMON: MOUSE; SOURCE 14 ORGANISM_TAXID: 10090; SOURCE 15 GENE: PTPRG; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: ORIGAMI2(DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET32 KEYWDS CELL ADHESION, PROTEIN COMPLEX, RECEPTOR PROTEIN TYROSINE KEYWDS 2 PHOSPHATASE, NEURAL RECOGNITION MOLECULE, GLYCOPROTEIN, MEMBRANE, KEYWDS 3 PHOSPHOPROTEIN, PROTEIN PHOSPHATASE, TRANSMEMBRANE EXPDTA X-RAY DIFFRACTION AUTHOR S.BOUYAIN REVDAT 6 31-MAR-21 3KLD 1 SOURCE HETSYN REVDAT 5 29-JUL-20 3KLD 1 COMPND REMARK SEQADV HETNAM REVDAT 5 2 1 LINK SITE REVDAT 4 01-NOV-17 3KLD 1 REMARK REVDAT 3 13-JUL-11 3KLD 1 VERSN REVDAT 2 16-FEB-10 3KLD 1 JRNL REVDAT 1 22-DEC-09 3KLD 0 JRNL AUTH S.BOUYAIN,D.J.WATKINS JRNL TITL THE PROTEIN TYROSINE PHOSPHATASES PTPRZ AND PTPRG BIND TO JRNL TITL 2 DISTINCT MEMBERS OF THE CONTACTIN FAMILY OF NEURAL JRNL TITL 3 RECOGNITION MOLECULES. JRNL REF PROC.NATL.ACAD.SCI.USA V. 107 2443 2010 JRNL REFN ISSN 0027-8424 JRNL PMID 20133774 JRNL DOI 10.1073/PNAS.0911235107 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.87 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.080 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.9 REMARK 3 NUMBER OF REFLECTIONS : 44869 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 2254 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.8730 - 5.0330 1.00 3110 165 0.1650 0.1920 REMARK 3 2 5.0330 - 3.9960 1.00 2966 156 0.1390 0.1780 REMARK 3 3 3.9960 - 3.4910 1.00 2932 155 0.1660 0.2080 REMARK 3 4 3.4910 - 3.1720 1.00 2890 152 0.1860 0.2230 REMARK 3 5 3.1720 - 2.9450 0.99 2886 152 0.1950 0.2540 REMARK 3 6 2.9450 - 2.7720 0.98 2833 150 0.1920 0.2610 REMARK 3 7 2.7720 - 2.6330 0.97 2796 148 0.1940 0.2670 REMARK 3 8 2.6330 - 2.5180 0.96 2747 144 0.1820 0.2670 REMARK 3 9 2.5180 - 2.4210 0.96 2762 148 0.1850 0.2360 REMARK 3 10 2.4210 - 2.3380 0.94 2724 142 0.1850 0.2780 REMARK 3 11 2.3380 - 2.2650 0.91 2614 139 0.1880 0.2720 REMARK 3 12 2.2650 - 2.2000 0.87 2461 128 0.1920 0.2300 REMARK 3 13 2.2000 - 2.1420 0.84 2396 127 0.1820 0.2860 REMARK 3 14 2.1420 - 2.0900 0.81 2335 120 0.1930 0.2400 REMARK 3 15 2.0900 - 2.0420 0.76 2179 113 0.2020 0.3230 REMARK 3 16 2.0420 - 1.9990 0.70 1984 115 0.2200 0.3120 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.31 REMARK 3 B_SOL : 44.87 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 13.78300 REMARK 3 B22 (A**2) : -7.85000 REMARK 3 B33 (A**2) : -5.93300 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 5263 REMARK 3 ANGLE : 1.354 7141 REMARK 3 CHIRALITY : 0.093 771 REMARK 3 PLANARITY : 0.006 930 REMARK 3 DIHEDRAL : 17.152 1918 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESID 25:121 REMARK 3 ORIGIN FOR THE GROUP (A): 11.9597 51.0811 21.5854 REMARK 3 T TENSOR REMARK 3 T11: 0.3088 T22: 0.1135 REMARK 3 T33: 0.2424 T12: 0.0457 REMARK 3 T13: -0.0207 T23: 0.0223 REMARK 3 L TENSOR REMARK 3 L11: -0.1003 L22: 0.5138 REMARK 3 L33: 0.8705 L12: 0.7175 REMARK 3 L13: -0.3049 L23: -0.4065 REMARK 3 S TENSOR REMARK 3 S11: 0.1114 S12: -0.0065 S13: 0.1305 REMARK 3 S21: 0.1020 S22: 0.0136 S23: 0.5074 REMARK 3 S31: -0.2853 S32: -0.0311 S33: -0.0886 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND RESID 122:224 REMARK 3 ORIGIN FOR THE GROUP (A): 12.0772 75.2566 -11.4419 REMARK 3 T TENSOR REMARK 3 T11: 0.1877 T22: 0.1664 REMARK 3 T33: 0.3919 T12: -0.0147 REMARK 3 T13: -0.0410 T23: 0.0575 REMARK 3 L TENSOR REMARK 3 L11: 0.6367 L22: 2.4752 REMARK 3 L33: 0.1703 L12: -0.0520 REMARK 3 L13: -0.4240 L23: -0.5711 REMARK 3 S TENSOR REMARK 3 S11: 0.0466 S12: -0.0149 S13: 0.0466 REMARK 3 S21: -0.3502 S22: 0.1382 S23: 0.7652 REMARK 3 S31: 0.0664 S32: 0.0071 S33: -0.1779 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND RESID 225:314 REMARK 3 ORIGIN FOR THE GROUP (A): 29.2520 60.7374 -12.7690 REMARK 3 T TENSOR REMARK 3 T11: 0.2454 T22: 0.1180 REMARK 3 T33: 0.1281 T12: 0.0379 REMARK 3 T13: 0.0303 T23: 0.0138 REMARK 3 L TENSOR REMARK 3 L11: 0.5460 L22: 1.7064 REMARK 3 L33: 0.3145 L12: 0.0416 REMARK 3 L13: -0.2823 L23: 0.0156 REMARK 3 S TENSOR REMARK 3 S11: 0.0729 S12: -0.0301 S13: 0.0538 REMARK 3 S21: -0.4668 S22: -0.0994 S23: -0.0076 REMARK 3 S31: -0.0456 S32: 0.0429 S33: 0.0069 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND RESID 315:402 REMARK 3 ORIGIN FOR THE GROUP (A): 32.9288 35.9592 22.2690 REMARK 3 T TENSOR REMARK 3 T11: 0.1909 T22: 0.1671 REMARK 3 T33: 0.1167 T12: -0.0222 REMARK 3 T13: 0.0002 T23: -0.0000 REMARK 3 L TENSOR REMARK 3 L11: 0.5271 L22: 0.6621 REMARK 3 L33: -0.0985 L12: -0.0443 REMARK 3 L13: 0.0078 L23: -0.1092 REMARK 3 S TENSOR REMARK 3 S11: -0.0219 S12: 0.0147 S13: 0.0089 REMARK 3 S21: 0.1044 S22: 0.0384 S23: -0.0615 REMARK 3 S31: 0.0910 S32: -0.0495 S33: -0.0120 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 40.8489 96.5695 -3.6802 REMARK 3 T TENSOR REMARK 3 T11: 0.1559 T22: 0.1932 REMARK 3 T33: 0.1233 T12: -0.0030 REMARK 3 T13: 0.0045 T23: 0.0098 REMARK 3 L TENSOR REMARK 3 L11: 0.7408 L22: 0.9715 REMARK 3 L33: 1.1705 L12: 0.0055 REMARK 3 L13: 0.0497 L23: 0.1267 REMARK 3 S TENSOR REMARK 3 S11: -0.0370 S12: -0.0625 S13: -0.0128 REMARK 3 S21: 0.1526 S22: 0.0156 S23: -0.0672 REMARK 3 S31: -0.0479 S32: 0.2501 S33: 0.0162 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3KLD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-NOV-09. REMARK 100 THE DEPOSITION ID IS D_1000056136. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-OCT-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : ROSENBAUM-ROCK MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46797 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 200 DATA REDUNDANCY : 12.50 REMARK 200 R MERGE (I) : 0.15600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.3 REMARK 200 DATA REDUNDANCY IN SHELL : 8.80 REMARK 200 R MERGE FOR SHELL (I) : 0.47500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.1.4 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG 1500 - 50 MM SODIUM CACODYLATE REMARK 280 PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 50.21600 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 69.47850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 50.21600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 69.47850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 21 REMARK 465 PRO A 22 REMARK 465 GLY A 72 REMARK 465 MET A 73 REMARK 465 ASP A 74 REMARK 465 PHE A 75 REMARK 465 ALA A 403 REMARK 465 GLU A 404 REMARK 465 GLY B 52 REMARK 465 PRO B 53 REMARK 465 GLY B 54 REMARK 465 SER B 55 REMARK 465 GLY B 96 REMARK 465 ASP B 97 REMARK 465 GLU B 98 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN A 90 C2 NAG A 1004 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O ASP A 217 O HOH A 461 3555 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 40 42.15 -94.08 REMARK 500 SER A 41 -169.08 -76.26 REMARK 500 CYS A 50 75.41 -156.90 REMARK 500 LYS A 125 -75.57 -69.10 REMARK 500 ASN A 160 44.78 38.91 REMARK 500 GLU A 161 9.19 82.62 REMARK 500 ASP A 167 -162.06 -174.34 REMARK 500 ASN A 216 49.11 -93.85 REMARK 500 ASP A 217 -141.38 -92.29 REMARK 500 GLU A 224 150.59 -48.36 REMARK 500 CYS A 247 118.65 -161.53 REMARK 500 GLU A 330 -7.37 73.13 REMARK 500 ARG A 361 -17.26 84.01 REMARK 500 GLN A 366 -127.98 50.06 REMARK 500 ASP B 57 85.45 -150.14 REMARK 500 GLU B 228 -11.65 85.67 REMARK 500 GLU B 263 57.92 -93.63 REMARK 500 ASP B 294 109.09 -54.78 REMARK 500 ASN B 313 -125.26 52.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3JXA RELATED DB: PDB REMARK 900 RELATED ID: 3JXG RELATED DB: PDB DBREF 3KLD A 25 404 UNP Q14BL8 Q14BL8_MOUSE 25 404 DBREF 3KLD B 55 320 UNP Q05909 PTPRG_MOUSE 55 320 SEQADV 3KLD GLY A 21 UNP Q14BL8 EXPRESSION TAG SEQADV 3KLD PRO A 22 UNP Q14BL8 EXPRESSION TAG SEQADV 3KLD GLY A 23 UNP Q14BL8 EXPRESSION TAG SEQADV 3KLD SER A 24 UNP Q14BL8 EXPRESSION TAG SEQADV 3KLD GLY B 52 UNP Q05909 EXPRESSION TAG SEQADV 3KLD PRO B 53 UNP Q05909 EXPRESSION TAG SEQADV 3KLD GLY B 54 UNP Q05909 EXPRESSION TAG SEQRES 1 A 384 GLY PRO GLY SER GLY PRO VAL PHE VAL GLN GLU PRO SER SEQRES 2 A 384 HIS VAL MET PHE PRO LEU ASP SER GLU GLU LYS LYS VAL SEQRES 3 A 384 LYS LEU SER CYS GLU VAL LYS GLY ASN PRO LYS PRO HIS SEQRES 4 A 384 ILE ARG TRP LYS LEU ASN GLY THR ASP VAL ASP ILE GLY SEQRES 5 A 384 MET ASP PHE ARG TYR SER VAL VAL ASP GLY SER LEU LEU SEQRES 6 A 384 ILE ASN ASN PRO ASN LYS THR GLN ASP ALA GLY THR TYR SEQRES 7 A 384 GLN CYS ILE ALA THR ASN SER PHE GLY THR ILE VAL SER SEQRES 8 A 384 ARG GLU ALA LYS LEU GLN PHE ALA TYR LEU GLU ASN PHE SEQRES 9 A 384 LYS THR ARG THR ARG SER THR VAL SER VAL ARG ARG GLY SEQRES 10 A 384 GLN GLY MET VAL LEU LEU CYS GLY PRO PRO PRO HIS SER SEQRES 11 A 384 GLY GLU LEU SER TYR ALA TRP ILE PHE ASN GLU TYR PRO SEQRES 12 A 384 SER TYR GLN ASP ASN ARG ARG PHE VAL SER GLN GLU THR SEQRES 13 A 384 GLY ASN LEU TYR ILE ALA LYS VAL GLU LYS SER ASP VAL SEQRES 14 A 384 GLY ASN TYR THR CYS VAL VAL THR ASN THR VAL THR ASN SEQRES 15 A 384 HIS LYS VAL LEU GLY PRO PRO THR PRO LEU ILE LEU ARG SEQRES 16 A 384 ASN ASP GLY VAL MET GLY GLU TYR GLU PRO LYS ILE GLU SEQRES 17 A 384 VAL GLN PHE PRO GLU THR VAL PRO ALA GLU LYS GLY THR SEQRES 18 A 384 THR VAL LYS LEU GLU CYS PHE ALA LEU GLY ASN PRO VAL SEQRES 19 A 384 PRO THR ILE LEU TRP ARG ARG ALA ASP GLY LYS PRO ILE SEQRES 20 A 384 ALA ARG LYS ALA ARG ARG HIS LYS SER ASN GLY ILE LEU SEQRES 21 A 384 GLU ILE PRO ASN PHE GLN GLN GLU ASP ALA GLY SER TYR SEQRES 22 A 384 GLU CYS VAL ALA GLU ASN SER ARG GLY LYS ASN VAL ALA SEQRES 23 A 384 LYS GLY GLN LEU THR PHE TYR ALA GLN PRO ASN TRP VAL SEQRES 24 A 384 GLN ILE ILE ASN ASP ILE HIS VAL ALA MET GLU GLU SER SEQRES 25 A 384 VAL PHE TRP GLU CYS LYS ALA ASN GLY ARG PRO LYS PRO SEQRES 26 A 384 THR TYR ARG TRP LEU LYS ASN GLY ASP PRO LEU LEU THR SEQRES 27 A 384 ARG ASP ARG ILE GLN ILE GLU GLN GLY THR LEU ASN ILE SEQRES 28 A 384 THR ILE VAL ASN LEU SER ASP ALA GLY MET TYR GLN CYS SEQRES 29 A 384 VAL ALA GLU ASN LYS HIS GLY VAL ILE PHE SER SER ALA SEQRES 30 A 384 GLU LEU SER VAL ILE ALA GLU SEQRES 1 B 269 GLY PRO GLY SER GLY ASP PRO TYR TRP ALA TYR SER GLY SEQRES 2 B 269 ALA TYR GLY PRO GLU HIS TRP VAL THR SER SER VAL SER SEQRES 3 B 269 CYS GLY GLY SER HIS GLN SER PRO ILE ASP ILE LEU ASP SEQRES 4 B 269 HIS HIS ALA ARG VAL GLY ASP GLU TYR GLN GLU LEU GLN SEQRES 5 B 269 LEU ASP GLY PHE ASP ASN GLU SER SER ASN LYS THR TRP SEQRES 6 B 269 MET LYS ASN THR GLY LYS THR VAL ALA ILE LEU LEU LYS SEQRES 7 B 269 ASP ASP TYR PHE VAL SER GLY ALA GLY LEU PRO GLY ARG SEQRES 8 B 269 PHE LYS ALA GLU LYS VAL GLU PHE HIS TRP GLY HIS SER SEQRES 9 B 269 ASN GLY SER ALA GLY SER GLU HIS SER VAL ASN GLY ARG SEQRES 10 B 269 ARG PHE PRO VAL GLU MET GLN ILE PHE PHE TYR ASN PRO SEQRES 11 B 269 ASP ASP PHE ASP SER PHE GLN THR ALA ILE SER GLU ASN SEQRES 12 B 269 ARG ILE ILE GLY ALA MET ALA ILE PHE PHE GLN VAL SER SEQRES 13 B 269 PRO ARG ASP ASN SER ALA LEU ASP PRO ILE ILE HIS GLY SEQRES 14 B 269 LEU LYS GLY VAL VAL HIS HIS GLU LYS GLU THR PHE LEU SEQRES 15 B 269 ASP PRO PHE ILE LEU ARG ASP LEU LEU PRO ALA SER LEU SEQRES 16 B 269 GLY SER TYR TYR ARG TYR THR GLY SER LEU THR THR PRO SEQRES 17 B 269 PRO CYS SER GLU ILE VAL GLU TRP ILE VAL PHE ARG ARG SEQRES 18 B 269 PRO VAL PRO ILE SER TYR HIS GLN LEU GLU ALA PHE TYR SEQRES 19 B 269 SER ILE PHE THR THR GLU GLN GLN ASP HIS VAL LYS SER SEQRES 20 B 269 VAL GLU TYR LEU ARG ASN ASN PHE ARG PRO GLN GLN ALA SEQRES 21 B 269 LEU ASN ASP ARG VAL VAL SER LYS SER MODRES 3KLD ASN A 65 ASN GLYCOSYLATION SITE MODRES 3KLD ASN A 90 ASN GLYCOSYLATION SITE MODRES 3KLD ASN A 191 ASN GLYCOSYLATION SITE MODRES 3KLD ASN A 370 ASN GLYCOSYLATION SITE HET NAG A1001 14 HET NAG A1002 14 HET NAG A1003 14 HET NAG A1004 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 NAG 4(C8 H15 N O6) FORMUL 7 HOH *415(H2 O) HELIX 1 1 ASN A 90 ALA A 95 1 6 HELIX 2 2 GLU A 185 VAL A 189 5 5 HELIX 3 3 GLN A 286 ALA A 290 5 5 HELIX 4 4 ASN A 375 ALA A 379 5 5 HELIX 5 5 GLY B 67 GLU B 69 5 3 HELIX 6 6 HIS B 70 SER B 75 1 6 HELIX 7 7 VAL B 76 GLY B 80 5 5 HELIX 8 8 LEU B 89 ALA B 93 5 5 HELIX 9 9 SER B 186 GLU B 193 1 8 HELIX 10 10 ASN B 211 ALA B 213 5 3 HELIX 11 11 LEU B 214 GLY B 223 1 10 HELIX 12 12 ILE B 237 LEU B 242 5 6 HELIX 13 13 TYR B 278 SER B 286 1 9 SHEET 1 A 2 SER A 24 GLN A 30 0 SHEET 2 A 2 GLU A 51 ASN A 55 -1 O LYS A 53 N VAL A 27 SHEET 1 B 4 VAL A 35 PRO A 38 0 SHEET 2 B 4 ALA A 114 LEU A 121 1 O GLN A 117 N PHE A 37 SHEET 3 B 4 GLY A 96 ASN A 104 -1 N TYR A 98 O ALA A 114 SHEET 4 B 4 GLY A 107 VAL A 110 -1 O ILE A 109 N ALA A 102 SHEET 1 C 5 THR A 67 ASP A 68 0 SHEET 2 C 5 HIS A 59 LEU A 64 -1 N LEU A 64 O THR A 67 SHEET 3 C 5 GLY A 96 ASN A 104 -1 O THR A 103 N HIS A 59 SHEET 4 C 5 ALA A 114 LEU A 121 -1 O ALA A 114 N TYR A 98 SHEET 5 C 5 HIS A 149 SER A 150 -1 O SER A 150 N TYR A 120 SHEET 1 D 3 LYS A 45 LEU A 48 0 SHEET 2 D 3 SER A 83 ASN A 87 -1 O LEU A 84 N LEU A 48 SHEET 3 D 3 TYR A 77 VAL A 80 -1 N SER A 78 O LEU A 85 SHEET 1 E 5 VAL A 132 ARG A 136 0 SHEET 2 E 5 THR A 210 VAL A 219 1 O ILE A 213 N VAL A 132 SHEET 3 E 5 GLY A 190 ASN A 198 -1 N GLY A 190 O LEU A 212 SHEET 4 E 5 LEU A 153 PHE A 159 -1 N ALA A 156 O VAL A 195 SHEET 5 E 5 TYR A 162 PRO A 163 -1 O TYR A 162 N PHE A 159 SHEET 1 F 4 VAL A 132 ARG A 136 0 SHEET 2 F 4 THR A 210 VAL A 219 1 O ILE A 213 N VAL A 132 SHEET 3 F 4 GLY A 190 ASN A 198 -1 N GLY A 190 O LEU A 212 SHEET 4 F 4 HIS A 203 LEU A 206 -1 O HIS A 203 N ASN A 198 SHEET 1 G 5 ARG A 170 VAL A 172 0 SHEET 2 G 5 LEU A 179 ILE A 181 -1 O TYR A 180 N PHE A 171 SHEET 3 G 5 MET A 140 LEU A 142 -1 N MET A 140 O ILE A 181 SHEET 4 G 5 VAL B 296 TYR B 301 -1 O LYS B 297 N VAL A 141 SHEET 5 G 5 PHE B 288 GLN B 293 -1 N THR B 289 O GLU B 300 SHEET 1 H 4 TYR A 223 GLN A 230 0 SHEET 2 H 4 VAL A 243 ASN A 252 -1 O LEU A 250 N LYS A 226 SHEET 3 H 4 ILE A 279 ILE A 282 -1 O LEU A 280 N LEU A 245 SHEET 4 H 4 ARG A 272 ARG A 273 -1 N ARG A 272 O GLU A 281 SHEET 1 I 4 THR A 234 GLU A 238 0 SHEET 2 I 4 GLY A 302 GLN A 320 1 O GLN A 309 N VAL A 235 SHEET 3 I 4 GLY A 291 ASN A 299 -1 N CYS A 295 O ALA A 306 SHEET 4 I 4 THR A 256 ARG A 261 -1 N ARG A 260 O GLU A 294 SHEET 1 J 3 THR A 234 GLU A 238 0 SHEET 2 J 3 GLY A 302 GLN A 320 1 O GLN A 309 N VAL A 235 SHEET 3 J 3 LYS A 338 ARG A 342 -1 O LYS A 338 N VAL A 319 SHEET 1 K 5 ILE A 325 ALA A 328 0 SHEET 2 K 5 GLY A 391 ILE A 402 1 O SER A 400 N ILE A 325 SHEET 3 K 5 GLY A 380 ASN A 388 -1 N ALA A 386 O ILE A 393 SHEET 4 K 5 THR A 346 LYS A 351 -1 N ARG A 348 O VAL A 385 SHEET 5 K 5 ASP A 354 PRO A 355 -1 O ASP A 354 N LYS A 351 SHEET 1 L 3 VAL A 333 GLU A 336 0 SHEET 2 L 3 THR A 368 ILE A 371 -1 O ILE A 371 N VAL A 333 SHEET 3 L 3 ILE A 362 GLU A 365 -1 N GLN A 363 O ASN A 370 SHEET 1 M 2 ASP B 87 ILE B 88 0 SHEET 2 M 2 SER B 164 VAL B 165 1 O SER B 164 N ILE B 88 SHEET 1 N 6 GLN B 103 ASP B 105 0 SHEET 2 N 6 PHE B 133 SER B 135 -1 O PHE B 133 N ASP B 105 SHEET 3 N 6 PHE B 143 TRP B 152 -1 O PHE B 143 N VAL B 134 SHEET 4 N 6 VAL B 172 TYR B 179 -1 O PHE B 177 N GLU B 146 SHEET 5 N 6 ILE B 197 SER B 207 -1 O ILE B 202 N MET B 174 SHEET 6 N 6 VAL B 274 SER B 277 1 O VAL B 274 N PHE B 203 SHEET 1 O 9 GLU B 230 PHE B 232 0 SHEET 2 O 9 TRP B 116 ASN B 119 -1 N MET B 117 O THR B 231 SHEET 3 O 9 VAL B 124 LEU B 127 -1 O ALA B 125 N LYS B 118 SHEET 4 O 9 PHE B 143 TRP B 152 -1 O VAL B 148 N ILE B 126 SHEET 5 O 9 VAL B 172 TYR B 179 -1 O PHE B 177 N GLU B 146 SHEET 6 O 9 ILE B 197 SER B 207 -1 O ILE B 202 N MET B 174 SHEET 7 O 9 VAL B 265 PHE B 270 1 O ILE B 268 N ALA B 201 SHEET 8 O 9 TYR B 249 GLY B 254 -1 N GLY B 254 O VAL B 265 SHEET 9 O 9 SER B 318 LYS B 319 -1 O SER B 318 N ARG B 251 SSBOND 1 CYS A 50 CYS A 100 1555 1555 2.08 SSBOND 2 CYS A 144 CYS A 194 1555 1555 2.04 SSBOND 3 CYS A 247 CYS A 295 1555 1555 2.04 SSBOND 4 CYS A 337 CYS A 384 1555 1555 1.99 SSBOND 5 CYS B 78 CYS B 261 1555 1555 2.08 LINK ND2 ASN A 65 C1 NAG A1001 1555 1555 1.43 LINK ND2 ASN A 90 C1 NAG A1004 1555 1555 1.44 LINK ND2 ASN A 191 C1 NAG A1002 1555 1555 1.44 LINK ND2 ASN A 370 C1 NAG A1003 1555 1555 1.43 CISPEP 1 ASN A 55 PRO A 56 0 7.44 CISPEP 2 ASN A 252 PRO A 253 0 -2.38 CISPEP 3 ARG A 342 PRO A 343 0 2.82 CISPEP 4 SER B 84 PRO B 85 0 3.13 CISPEP 5 PRO B 259 PRO B 260 0 6.81 CRYST1 100.432 138.957 50.565 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009957 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007196 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019777 0.00000