data_3KTN # _entry.id 3KTN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.338 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3KTN RCSB RCSB056433 WWPDB D_1000056433 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id NYSGXRC-11206j _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3KTN _pdbx_database_status.recvd_initial_deposition_date 2009-11-25 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Satyanarayana, L.' 1 ? 'Burley, S.K.' 2 0000-0002-2487-9713 'Swaminathan, S.' 3 ? 'New York SGX Research Center for Structural Genomics (NYSGXRC)' 4 ? # _citation.id primary _citation.title 'Crystal Structure of a putative 2-Keto-3-deoxygluconate Kinase from Enterococcus faecalis' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Satyanarayana, L.' 1 ? primary 'Burley, S.K.' 2 0000-0002-2487-9713 primary 'Swaminathan, S.' 3 ? # _cell.entry_id 3KTN _cell.length_a 145.564 _cell.length_b 145.564 _cell.length_c 126.401 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3KTN _symmetry.space_group_name_H-M 'P 63 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Carbohydrate kinase, pfkB family' 39682.512 1 2.7.1.45 ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 water nat water 18.015 163 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)SLKIAAFGEV(MSE)LRFTPPEYL(MSE)LEQTEQLR(MSE)NFVGTGVNLLANLAHFQLETALITKLPANRLGE AGKAALRKLGISDQWVGEKGDHIGSFFAE(MSE)GYGIRPTQVTYQNRHQSAFGISEAKDYDFEAFLAEVD(MSE)VHIC GISLSLTEKTRDAALILAQKAHAYQKKVCFDFNYRPSLNTANSALF(MSE)RQQYERILPYCDIVFGSRRDLVELLGFIP REDLEGEAQETELIQRF(MSE)SQYNLEWFAGTTRSHSQNQNYLSGYLYTQNEYQQSEKRPLLNLDRIGAGDAYAAGILY GYSQNWSLEKAVTFATVNGVLAHTIQGDIPLTTVKQVNHVLEHPNIDLIREGHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MSLKIAAFGEVMLRFTPPEYLMLEQTEQLRMNFVGTGVNLLANLAHFQLETALITKLPANRLGEAGKAALRKLGISDQWV GEKGDHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYDFEAFLAEVDMVHICGISLSLTEKTRDAALILAQKAHAY QKKVCFDFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRRDLVELLGFIPREDLEGEAQETELIQRFMSQYNLEWFAG TTRSHSQNQNYLSGYLYTQNEYQQSEKRPLLNLDRIGAGDAYAAGILYGYSQNWSLEKAVTFATVNGVLAHTIQGDIPLT TVKQVNHVLEHPNIDLIREGHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier NYSGXRC-11206j # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 SER n 1 3 LEU n 1 4 LYS n 1 5 ILE n 1 6 ALA n 1 7 ALA n 1 8 PHE n 1 9 GLY n 1 10 GLU n 1 11 VAL n 1 12 MSE n 1 13 LEU n 1 14 ARG n 1 15 PHE n 1 16 THR n 1 17 PRO n 1 18 PRO n 1 19 GLU n 1 20 TYR n 1 21 LEU n 1 22 MSE n 1 23 LEU n 1 24 GLU n 1 25 GLN n 1 26 THR n 1 27 GLU n 1 28 GLN n 1 29 LEU n 1 30 ARG n 1 31 MSE n 1 32 ASN n 1 33 PHE n 1 34 VAL n 1 35 GLY n 1 36 THR n 1 37 GLY n 1 38 VAL n 1 39 ASN n 1 40 LEU n 1 41 LEU n 1 42 ALA n 1 43 ASN n 1 44 LEU n 1 45 ALA n 1 46 HIS n 1 47 PHE n 1 48 GLN n 1 49 LEU n 1 50 GLU n 1 51 THR n 1 52 ALA n 1 53 LEU n 1 54 ILE n 1 55 THR n 1 56 LYS n 1 57 LEU n 1 58 PRO n 1 59 ALA n 1 60 ASN n 1 61 ARG n 1 62 LEU n 1 63 GLY n 1 64 GLU n 1 65 ALA n 1 66 GLY n 1 67 LYS n 1 68 ALA n 1 69 ALA n 1 70 LEU n 1 71 ARG n 1 72 LYS n 1 73 LEU n 1 74 GLY n 1 75 ILE n 1 76 SER n 1 77 ASP n 1 78 GLN n 1 79 TRP n 1 80 VAL n 1 81 GLY n 1 82 GLU n 1 83 LYS n 1 84 GLY n 1 85 ASP n 1 86 HIS n 1 87 ILE n 1 88 GLY n 1 89 SER n 1 90 PHE n 1 91 PHE n 1 92 ALA n 1 93 GLU n 1 94 MSE n 1 95 GLY n 1 96 TYR n 1 97 GLY n 1 98 ILE n 1 99 ARG n 1 100 PRO n 1 101 THR n 1 102 GLN n 1 103 VAL n 1 104 THR n 1 105 TYR n 1 106 GLN n 1 107 ASN n 1 108 ARG n 1 109 HIS n 1 110 GLN n 1 111 SER n 1 112 ALA n 1 113 PHE n 1 114 GLY n 1 115 ILE n 1 116 SER n 1 117 GLU n 1 118 ALA n 1 119 LYS n 1 120 ASP n 1 121 TYR n 1 122 ASP n 1 123 PHE n 1 124 GLU n 1 125 ALA n 1 126 PHE n 1 127 LEU n 1 128 ALA n 1 129 GLU n 1 130 VAL n 1 131 ASP n 1 132 MSE n 1 133 VAL n 1 134 HIS n 1 135 ILE n 1 136 CYS n 1 137 GLY n 1 138 ILE n 1 139 SER n 1 140 LEU n 1 141 SER n 1 142 LEU n 1 143 THR n 1 144 GLU n 1 145 LYS n 1 146 THR n 1 147 ARG n 1 148 ASP n 1 149 ALA n 1 150 ALA n 1 151 LEU n 1 152 ILE n 1 153 LEU n 1 154 ALA n 1 155 GLN n 1 156 LYS n 1 157 ALA n 1 158 HIS n 1 159 ALA n 1 160 TYR n 1 161 GLN n 1 162 LYS n 1 163 LYS n 1 164 VAL n 1 165 CYS n 1 166 PHE n 1 167 ASP n 1 168 PHE n 1 169 ASN n 1 170 TYR n 1 171 ARG n 1 172 PRO n 1 173 SER n 1 174 LEU n 1 175 ASN n 1 176 THR n 1 177 ALA n 1 178 ASN n 1 179 SER n 1 180 ALA n 1 181 LEU n 1 182 PHE n 1 183 MSE n 1 184 ARG n 1 185 GLN n 1 186 GLN n 1 187 TYR n 1 188 GLU n 1 189 ARG n 1 190 ILE n 1 191 LEU n 1 192 PRO n 1 193 TYR n 1 194 CYS n 1 195 ASP n 1 196 ILE n 1 197 VAL n 1 198 PHE n 1 199 GLY n 1 200 SER n 1 201 ARG n 1 202 ARG n 1 203 ASP n 1 204 LEU n 1 205 VAL n 1 206 GLU n 1 207 LEU n 1 208 LEU n 1 209 GLY n 1 210 PHE n 1 211 ILE n 1 212 PRO n 1 213 ARG n 1 214 GLU n 1 215 ASP n 1 216 LEU n 1 217 GLU n 1 218 GLY n 1 219 GLU n 1 220 ALA n 1 221 GLN n 1 222 GLU n 1 223 THR n 1 224 GLU n 1 225 LEU n 1 226 ILE n 1 227 GLN n 1 228 ARG n 1 229 PHE n 1 230 MSE n 1 231 SER n 1 232 GLN n 1 233 TYR n 1 234 ASN n 1 235 LEU n 1 236 GLU n 1 237 TRP n 1 238 PHE n 1 239 ALA n 1 240 GLY n 1 241 THR n 1 242 THR n 1 243 ARG n 1 244 SER n 1 245 HIS n 1 246 SER n 1 247 GLN n 1 248 ASN n 1 249 GLN n 1 250 ASN n 1 251 TYR n 1 252 LEU n 1 253 SER n 1 254 GLY n 1 255 TYR n 1 256 LEU n 1 257 TYR n 1 258 THR n 1 259 GLN n 1 260 ASN n 1 261 GLU n 1 262 TYR n 1 263 GLN n 1 264 GLN n 1 265 SER n 1 266 GLU n 1 267 LYS n 1 268 ARG n 1 269 PRO n 1 270 LEU n 1 271 LEU n 1 272 ASN n 1 273 LEU n 1 274 ASP n 1 275 ARG n 1 276 ILE n 1 277 GLY n 1 278 ALA n 1 279 GLY n 1 280 ASP n 1 281 ALA n 1 282 TYR n 1 283 ALA n 1 284 ALA n 1 285 GLY n 1 286 ILE n 1 287 LEU n 1 288 TYR n 1 289 GLY n 1 290 TYR n 1 291 SER n 1 292 GLN n 1 293 ASN n 1 294 TRP n 1 295 SER n 1 296 LEU n 1 297 GLU n 1 298 LYS n 1 299 ALA n 1 300 VAL n 1 301 THR n 1 302 PHE n 1 303 ALA n 1 304 THR n 1 305 VAL n 1 306 ASN n 1 307 GLY n 1 308 VAL n 1 309 LEU n 1 310 ALA n 1 311 HIS n 1 312 THR n 1 313 ILE n 1 314 GLN n 1 315 GLY n 1 316 ASP n 1 317 ILE n 1 318 PRO n 1 319 LEU n 1 320 THR n 1 321 THR n 1 322 VAL n 1 323 LYS n 1 324 GLN n 1 325 VAL n 1 326 ASN n 1 327 HIS n 1 328 VAL n 1 329 LEU n 1 330 GLU n 1 331 HIS n 1 332 PRO n 1 333 ASN n 1 334 ILE n 1 335 ASP n 1 336 LEU n 1 337 ILE n 1 338 ARG n 1 339 GLU n 1 340 GLY n 1 341 HIS n 1 342 HIS n 1 343 HIS n 1 344 HIS n 1 345 HIS n 1 346 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Streptococcus faecalis' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene '1199733, EF_0840' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details 'TOP10 (Invitrogen)' _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Enterococcus faecalis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1351 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3) CODON+RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pSGX3 (BC)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q837J7_ENTFA _struct_ref.pdbx_db_accession Q837J7 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KIAAFGEVMLRFTPPEYLMLEQTEQLRMNFVGTGVNLLANLAHFQLETALITKLPANRLGEAGKAALRKLGISDQWVGEK GDHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYDFEAFLAEVDMVHICGISLSLTEKTRDAALILAQKAHAYQKK VCFDFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRRDLVELLGFIPREDLEGEAQETELIQRFMSQYNLEWFAGTTR SHSQNQNYLSGYLYTQNEYQQSEKRPLLNLDRIGAGDAYAAGILYGYSQNWSLEKAVTFATVNGVLAHTIQGDIPLTTVK QVNHVLEHPNIDLIR ; _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3KTN _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 338 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q837J7 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 336 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 336 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3KTN MSE A 1 ? UNP Q837J7 ? ? 'expression tag' -3 1 1 3KTN SER A 2 ? UNP Q837J7 ? ? 'expression tag' -2 2 1 3KTN LEU A 3 ? UNP Q837J7 ? ? 'expression tag' -1 3 1 3KTN GLU A 339 ? UNP Q837J7 ? ? 'expression tag' 337 4 1 3KTN GLY A 340 ? UNP Q837J7 ? ? 'expression tag' 338 5 1 3KTN HIS A 341 ? UNP Q837J7 ? ? 'expression tag' 339 6 1 3KTN HIS A 342 ? UNP Q837J7 ? ? 'expression tag' 340 7 1 3KTN HIS A 343 ? UNP Q837J7 ? ? 'expression tag' 341 8 1 3KTN HIS A 344 ? UNP Q837J7 ? ? 'expression tag' 342 9 1 3KTN HIS A 345 ? UNP Q837J7 ? ? 'expression tag' 343 10 1 3KTN HIS A 346 ? UNP Q837J7 ? ? 'expression tag' 344 11 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3KTN _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.87 _exptl_crystal.density_percent_sol 74.75 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 292 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details ;0.2M Ammonium Citrate pH 7.0 8% W/V Trimethylamine N-oxide dihydrate 20% W/V PEG 3,350, VAPOR DIFFUSION, SITTING DROP, temperature 292K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2000-10-16 _diffrn_detector.details Mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X25' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X25 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9792 # _reflns.entry_id 3KTN _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 2.18 _reflns.number_obs 41573 _reflns.number_all 41573 _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.084 _reflns.pdbx_netI_over_sigmaI 13.5 _reflns.B_iso_Wilson_estimate 32.2 _reflns.pdbx_redundancy 42.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.18 _reflns_shell.d_res_low 2.26 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.70 _reflns_shell.meanI_over_sigI_obs 11.1 _reflns_shell.pdbx_redundancy 41.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 4078 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3KTN _refine.ls_number_reflns_obs 36708 _refine.ls_number_reflns_all 36708 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 44.59 _refine.ls_d_res_high 2.26 _refine.ls_percent_reflns_obs 97.9 _refine.ls_R_factor_obs 0.223 _refine.ls_R_factor_all 0.242 _refine.ls_R_factor_R_work 0.223 _refine.ls_R_factor_R_free 0.238 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 1494 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 44.3 _refine.aniso_B[1][1] 3.28 _refine.aniso_B[2][2] 3.28 _refine.aniso_B[3][3] -6.55 _refine.aniso_B[1][2] 2.37 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model Overall _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3KTN _refine_analyze.Luzzati_coordinate_error_obs 0.27 _refine_analyze.Luzzati_sigma_a_obs 0.20 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.30 _refine_analyze.Luzzati_sigma_a_free 0.19 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2712 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 163 _refine_hist.number_atoms_total 2881 _refine_hist.d_res_high 2.26 _refine_hist.d_res_low 44.59 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_degree 22.6 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_deg 0.70 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 2.26 _refine_ls_shell.d_res_low 2.40 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.237 _refine_ls_shell.percent_reflns_obs 93.7 _refine_ls_shell.R_factor_R_free 0.241 _refine_ls_shell.R_factor_R_free_error 0.015 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 255 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 5473 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3KTN _struct.title 'Crystal Structure of a putative 2-Keto-3-deoxygluconate Kinase from Enterococcus faecalis' _struct.pdbx_descriptor 'Carbohydrate kinase, pfkB family (E.C.2.7.1.45)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3KTN _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text ;KINASE, PFKB FAMILY, RIBOKIANSE, 2-Keto-3-deoxygluconate Kinase, PSI-II, NYSGXRC, Structural Genomics, Protein Structure Initiative, New York SGX Research Center for Structural Genomics, TRANSFERASE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details 'Trimer of dimers' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 35 ? PHE A 47 ? GLY A 33 PHE A 45 1 ? 13 HELX_P HELX_P2 2 ASN A 60 ? LEU A 73 ? ASN A 58 LEU A 71 1 ? 14 HELX_P HELX_P3 3 GLU A 117 ? TYR A 121 ? GLU A 115 TYR A 119 5 ? 5 HELX_P HELX_P4 4 ASP A 122 ? ALA A 128 ? ASP A 120 ALA A 126 1 ? 7 HELX_P HELX_P5 5 GLY A 137 ? THR A 143 ? GLY A 135 THR A 141 1 ? 7 HELX_P HELX_P6 6 THR A 143 ? TYR A 160 ? THR A 141 TYR A 158 1 ? 18 HELX_P HELX_P7 7 ARG A 171 ? ASN A 175 ? ARG A 169 ASN A 173 5 ? 5 HELX_P HELX_P8 8 THR A 176 ? LEU A 191 ? THR A 174 LEU A 189 1 ? 16 HELX_P HELX_P9 9 PRO A 192 ? CYS A 194 ? PRO A 190 CYS A 192 5 ? 3 HELX_P HELX_P10 10 SER A 200 ? LEU A 207 ? SER A 198 LEU A 205 1 ? 8 HELX_P HELX_P11 11 GLU A 217 ? ASN A 234 ? GLU A 215 ASN A 232 1 ? 18 HELX_P HELX_P12 12 GLY A 277 ? GLN A 292 ? GLY A 275 GLN A 290 1 ? 16 HELX_P HELX_P13 13 SER A 295 ? HIS A 311 ? SER A 293 HIS A 309 1 ? 17 HELX_P HELX_P14 14 THR A 321 ? HIS A 331 ? THR A 319 HIS A 329 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 12 C ? ? ? 1_555 A LEU 13 N ? ? A MSE 10 A LEU 11 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale2 covale both ? A MSE 22 C ? ? ? 1_555 A LEU 23 N ? ? A MSE 20 A LEU 21 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale3 covale both ? A MSE 31 C ? ? ? 1_555 A ASN 32 N ? ? A MSE 29 A ASN 30 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale4 covale both ? A MSE 94 C ? ? ? 1_555 A GLY 95 N ? ? A MSE 92 A GLY 93 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale5 covale both ? A MSE 132 C ? ? ? 1_555 A VAL 133 N ? ? A MSE 130 A VAL 131 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale6 covale both ? A MSE 183 C ? ? ? 1_555 A ARG 184 N ? ? A MSE 181 A ARG 182 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale7 covale both ? A MSE 230 C ? ? ? 1_555 A SER 231 N ? ? A MSE 228 A SER 229 1_555 ? ? ? ? ? ? ? 1.331 ? ? metalc1 metalc ? ? D HOH . O ? ? ? 1_555 C MG . MG ? ? A HOH 1 A MG 601 1_555 ? ? ? ? ? ? ? 2.277 ? ? metalc2 metalc ? ? A ASP 274 O ? ? ? 1_555 C MG . MG ? ? A ASP 272 A MG 601 1_555 ? ? ? ? ? ? ? 2.876 ? ? metalc3 metalc ? ? A ILE 276 O ? ? ? 1_555 C MG . MG ? ? A ILE 274 A MG 601 1_555 ? ? ? ? ? ? ? 2.712 ? ? metalc4 metalc ? ? D HOH . O ? ? ? 1_555 C MG . MG ? ? A HOH 357 A MG 601 1_555 ? ? ? ? ? ? ? 2.622 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 9 ? B ? 9 ? C ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel B 6 7 ? parallel B 7 8 ? anti-parallel B 8 9 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? parallel C 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 80 ? GLU A 82 ? VAL A 78 GLU A 80 A 2 GLU A 50 ? LEU A 57 ? GLU A 48 LEU A 55 A 3 LYS A 4 ? PHE A 8 ? LYS A 2 PHE A 6 A 4 MSE A 132 ? ILE A 135 ? MSE A 130 ILE A 133 A 5 LYS A 163 ? ASP A 167 ? LYS A 161 ASP A 165 A 6 ILE A 196 ? PHE A 198 ? ILE A 194 PHE A 196 A 7 TRP A 237 ? HIS A 245 ? TRP A 235 HIS A 243 A 8 ASN A 250 ? TYR A 257 ? ASN A 248 TYR A 255 A 9 TYR A 262 ? GLN A 264 ? TYR A 260 GLN A 262 B 1 VAL A 80 ? GLU A 82 ? VAL A 78 GLU A 80 B 2 GLU A 50 ? LEU A 57 ? GLU A 48 LEU A 55 B 3 LYS A 4 ? PHE A 8 ? LYS A 2 PHE A 6 B 4 MSE A 132 ? ILE A 135 ? MSE A 130 ILE A 133 B 5 LYS A 163 ? ASP A 167 ? LYS A 161 ASP A 165 B 6 ILE A 196 ? PHE A 198 ? ILE A 194 PHE A 196 B 7 TRP A 237 ? HIS A 245 ? TRP A 235 HIS A 243 B 8 ASN A 250 ? TYR A 257 ? ASN A 248 TYR A 255 B 9 ARG A 268 ? PRO A 269 ? ARG A 266 PRO A 267 C 1 ARG A 30 ? VAL A 34 ? ARG A 28 VAL A 32 C 2 MSE A 12 ? THR A 16 ? MSE A 10 THR A 14 C 3 GLY A 88 ? GLU A 93 ? GLY A 86 GLU A 91 C 4 GLN A 102 ? TYR A 105 ? GLN A 100 TYR A 103 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLY A 81 ? O GLY A 79 N LEU A 57 ? N LEU A 55 A 2 3 O ILE A 54 ? O ILE A 52 N ALA A 7 ? N ALA A 5 A 3 4 N PHE A 8 ? N PHE A 6 O HIS A 134 ? O HIS A 132 A 4 5 N ILE A 135 ? N ILE A 133 O CYS A 165 ? O CYS A 163 A 5 6 N PHE A 166 ? N PHE A 164 O PHE A 198 ? O PHE A 196 A 6 7 N VAL A 197 ? N VAL A 195 O TRP A 237 ? O TRP A 235 A 7 8 N PHE A 238 ? N PHE A 236 O TYR A 257 ? O TYR A 255 A 8 9 N LEU A 256 ? N LEU A 254 O GLN A 263 ? O GLN A 261 B 1 2 O GLY A 81 ? O GLY A 79 N LEU A 57 ? N LEU A 55 B 2 3 O ILE A 54 ? O ILE A 52 N ALA A 7 ? N ALA A 5 B 3 4 N PHE A 8 ? N PHE A 6 O HIS A 134 ? O HIS A 132 B 4 5 N ILE A 135 ? N ILE A 133 O CYS A 165 ? O CYS A 163 B 5 6 N PHE A 166 ? N PHE A 164 O PHE A 198 ? O PHE A 196 B 6 7 N VAL A 197 ? N VAL A 195 O TRP A 237 ? O TRP A 235 B 7 8 N PHE A 238 ? N PHE A 236 O TYR A 257 ? O TYR A 255 B 8 9 N LEU A 252 ? N LEU A 250 O ARG A 268 ? O ARG A 266 C 1 2 O VAL A 34 ? O VAL A 32 N MSE A 12 ? N MSE A 10 C 2 3 N PHE A 15 ? N PHE A 13 O ALA A 92 ? O ALA A 90 C 3 4 N GLU A 93 ? N GLU A 91 O GLN A 102 ? O GLN A 100 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 401 ? 4 'BINDING SITE FOR RESIDUE SO4 A 401' AC2 Software A MG 601 ? 8 'BINDING SITE FOR RESIDUE MG A 601' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 TYR A 105 ? TYR A 103 . ? 1_555 ? 2 AC1 4 ARG A 108 ? ARG A 106 . ? 1_555 ? 3 AC1 4 ASN A 169 ? ASN A 167 . ? 1_555 ? 4 AC1 4 ARG A 171 ? ARG A 169 . ? 1_555 ? 5 AC2 8 HOH D . ? HOH A 1 . ? 1_555 ? 6 AC2 8 ASP A 274 ? ASP A 272 . ? 1_555 ? 7 AC2 8 ARG A 275 ? ARG A 273 . ? 1_555 ? 8 AC2 8 ILE A 276 ? ILE A 274 . ? 1_555 ? 9 AC2 8 ALA A 278 ? ALA A 276 . ? 1_555 ? 10 AC2 8 ALA A 310 ? ALA A 308 . ? 1_555 ? 11 AC2 8 GLY A 315 ? GLY A 313 . ? 1_555 ? 12 AC2 8 HOH D . ? HOH A 357 . ? 1_555 ? # _database_PDB_matrix.entry_id 3KTN _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3KTN _atom_sites.fract_transf_matrix[1][1] 0.006870 _atom_sites.fract_transf_matrix[1][2] 0.003966 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007933 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007911 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -3 ? ? ? A . n A 1 2 SER 2 -2 -2 SER SER A . n A 1 3 LEU 3 -1 -1 LEU LEU A . n A 1 4 LYS 4 2 2 LYS LYS A . n A 1 5 ILE 5 3 3 ILE ILE A . n A 1 6 ALA 6 4 4 ALA ALA A . n A 1 7 ALA 7 5 5 ALA ALA A . n A 1 8 PHE 8 6 6 PHE PHE A . n A 1 9 GLY 9 7 7 GLY GLY A . n A 1 10 GLU 10 8 8 GLU GLU A . n A 1 11 VAL 11 9 9 VAL VAL A . n A 1 12 MSE 12 10 10 MSE MSE A . n A 1 13 LEU 13 11 11 LEU LEU A . n A 1 14 ARG 14 12 12 ARG ARG A . n A 1 15 PHE 15 13 13 PHE PHE A . n A 1 16 THR 16 14 14 THR THR A . n A 1 17 PRO 17 15 15 PRO PRO A . n A 1 18 PRO 18 16 16 PRO PRO A . n A 1 19 GLU 19 17 17 GLU GLU A . n A 1 20 TYR 20 18 18 TYR TYR A . n A 1 21 LEU 21 19 19 LEU LEU A . n A 1 22 MSE 22 20 20 MSE MSE A . n A 1 23 LEU 23 21 21 LEU LEU A . n A 1 24 GLU 24 22 22 GLU GLU A . n A 1 25 GLN 25 23 23 GLN GLN A . n A 1 26 THR 26 24 24 THR THR A . n A 1 27 GLU 27 25 25 GLU GLU A . n A 1 28 GLN 28 26 26 GLN GLN A . n A 1 29 LEU 29 27 27 LEU LEU A . n A 1 30 ARG 30 28 28 ARG ARG A . n A 1 31 MSE 31 29 29 MSE MSE A . n A 1 32 ASN 32 30 30 ASN ASN A . n A 1 33 PHE 33 31 31 PHE PHE A . n A 1 34 VAL 34 32 32 VAL VAL A . n A 1 35 GLY 35 33 33 GLY GLY A . n A 1 36 THR 36 34 34 THR THR A . n A 1 37 GLY 37 35 35 GLY GLY A . n A 1 38 VAL 38 36 36 VAL VAL A . n A 1 39 ASN 39 37 37 ASN ASN A . n A 1 40 LEU 40 38 38 LEU LEU A . n A 1 41 LEU 41 39 39 LEU LEU A . n A 1 42 ALA 42 40 40 ALA ALA A . n A 1 43 ASN 43 41 41 ASN ASN A . n A 1 44 LEU 44 42 42 LEU LEU A . n A 1 45 ALA 45 43 43 ALA ALA A . n A 1 46 HIS 46 44 44 HIS HIS A . n A 1 47 PHE 47 45 45 PHE PHE A . n A 1 48 GLN 48 46 46 GLN GLN A . n A 1 49 LEU 49 47 47 LEU LEU A . n A 1 50 GLU 50 48 48 GLU GLU A . n A 1 51 THR 51 49 49 THR THR A . n A 1 52 ALA 52 50 50 ALA ALA A . n A 1 53 LEU 53 51 51 LEU LEU A . n A 1 54 ILE 54 52 52 ILE ILE A . n A 1 55 THR 55 53 53 THR THR A . n A 1 56 LYS 56 54 54 LYS LYS A . n A 1 57 LEU 57 55 55 LEU LEU A . n A 1 58 PRO 58 56 56 PRO PRO A . n A 1 59 ALA 59 57 57 ALA ALA A . n A 1 60 ASN 60 58 58 ASN ASN A . n A 1 61 ARG 61 59 59 ARG ARG A . n A 1 62 LEU 62 60 60 LEU LEU A . n A 1 63 GLY 63 61 61 GLY GLY A . n A 1 64 GLU 64 62 62 GLU GLU A . n A 1 65 ALA 65 63 63 ALA ALA A . n A 1 66 GLY 66 64 64 GLY GLY A . n A 1 67 LYS 67 65 65 LYS LYS A . n A 1 68 ALA 68 66 66 ALA ALA A . n A 1 69 ALA 69 67 67 ALA ALA A . n A 1 70 LEU 70 68 68 LEU LEU A . n A 1 71 ARG 71 69 69 ARG ARG A . n A 1 72 LYS 72 70 70 LYS LYS A . n A 1 73 LEU 73 71 71 LEU LEU A . n A 1 74 GLY 74 72 72 GLY GLY A . n A 1 75 ILE 75 73 73 ILE ILE A . n A 1 76 SER 76 74 74 SER SER A . n A 1 77 ASP 77 75 75 ASP ASP A . n A 1 78 GLN 78 76 76 GLN GLN A . n A 1 79 TRP 79 77 77 TRP TRP A . n A 1 80 VAL 80 78 78 VAL VAL A . n A 1 81 GLY 81 79 79 GLY GLY A . n A 1 82 GLU 82 80 80 GLU GLU A . n A 1 83 LYS 83 81 81 LYS LYS A . n A 1 84 GLY 84 82 82 GLY GLY A . n A 1 85 ASP 85 83 83 ASP ASP A . n A 1 86 HIS 86 84 84 HIS HIS A . n A 1 87 ILE 87 85 85 ILE ILE A . n A 1 88 GLY 88 86 86 GLY GLY A . n A 1 89 SER 89 87 87 SER SER A . n A 1 90 PHE 90 88 88 PHE PHE A . n A 1 91 PHE 91 89 89 PHE PHE A . n A 1 92 ALA 92 90 90 ALA ALA A . n A 1 93 GLU 93 91 91 GLU GLU A . n A 1 94 MSE 94 92 92 MSE MSE A . n A 1 95 GLY 95 93 93 GLY GLY A . n A 1 96 TYR 96 94 94 TYR TYR A . n A 1 97 GLY 97 95 95 GLY GLY A . n A 1 98 ILE 98 96 96 ILE ILE A . n A 1 99 ARG 99 97 97 ARG ARG A . n A 1 100 PRO 100 98 98 PRO PRO A . n A 1 101 THR 101 99 99 THR THR A . n A 1 102 GLN 102 100 100 GLN GLN A . n A 1 103 VAL 103 101 101 VAL VAL A . n A 1 104 THR 104 102 102 THR THR A . n A 1 105 TYR 105 103 103 TYR TYR A . n A 1 106 GLN 106 104 104 GLN GLN A . n A 1 107 ASN 107 105 105 ASN ASN A . n A 1 108 ARG 108 106 106 ARG ARG A . n A 1 109 HIS 109 107 107 HIS HIS A . n A 1 110 GLN 110 108 108 GLN GLN A . n A 1 111 SER 111 109 109 SER SER A . n A 1 112 ALA 112 110 110 ALA ALA A . n A 1 113 PHE 113 111 111 PHE PHE A . n A 1 114 GLY 114 112 112 GLY GLY A . n A 1 115 ILE 115 113 113 ILE ILE A . n A 1 116 SER 116 114 114 SER SER A . n A 1 117 GLU 117 115 115 GLU GLU A . n A 1 118 ALA 118 116 116 ALA ALA A . n A 1 119 LYS 119 117 117 LYS LYS A . n A 1 120 ASP 120 118 118 ASP ASP A . n A 1 121 TYR 121 119 119 TYR TYR A . n A 1 122 ASP 122 120 120 ASP ASP A . n A 1 123 PHE 123 121 121 PHE PHE A . n A 1 124 GLU 124 122 122 GLU GLU A . n A 1 125 ALA 125 123 123 ALA ALA A . n A 1 126 PHE 126 124 124 PHE PHE A . n A 1 127 LEU 127 125 125 LEU LEU A . n A 1 128 ALA 128 126 126 ALA ALA A . n A 1 129 GLU 129 127 127 GLU GLU A . n A 1 130 VAL 130 128 128 VAL VAL A . n A 1 131 ASP 131 129 129 ASP ASP A . n A 1 132 MSE 132 130 130 MSE MSE A . n A 1 133 VAL 133 131 131 VAL VAL A . n A 1 134 HIS 134 132 132 HIS HIS A . n A 1 135 ILE 135 133 133 ILE ILE A . n A 1 136 CYS 136 134 134 CYS CYS A . n A 1 137 GLY 137 135 135 GLY GLY A . n A 1 138 ILE 138 136 136 ILE ILE A . n A 1 139 SER 139 137 137 SER SER A . n A 1 140 LEU 140 138 138 LEU LEU A . n A 1 141 SER 141 139 139 SER SER A . n A 1 142 LEU 142 140 140 LEU LEU A . n A 1 143 THR 143 141 141 THR THR A . n A 1 144 GLU 144 142 142 GLU GLU A . n A 1 145 LYS 145 143 143 LYS LYS A . n A 1 146 THR 146 144 144 THR THR A . n A 1 147 ARG 147 145 145 ARG ARG A . n A 1 148 ASP 148 146 146 ASP ASP A . n A 1 149 ALA 149 147 147 ALA ALA A . n A 1 150 ALA 150 148 148 ALA ALA A . n A 1 151 LEU 151 149 149 LEU LEU A . n A 1 152 ILE 152 150 150 ILE ILE A . n A 1 153 LEU 153 151 151 LEU LEU A . n A 1 154 ALA 154 152 152 ALA ALA A . n A 1 155 GLN 155 153 153 GLN GLN A . n A 1 156 LYS 156 154 154 LYS LYS A . n A 1 157 ALA 157 155 155 ALA ALA A . n A 1 158 HIS 158 156 156 HIS HIS A . n A 1 159 ALA 159 157 157 ALA ALA A . n A 1 160 TYR 160 158 158 TYR TYR A . n A 1 161 GLN 161 159 159 GLN GLN A . n A 1 162 LYS 162 160 160 LYS LYS A . n A 1 163 LYS 163 161 161 LYS LYS A . n A 1 164 VAL 164 162 162 VAL VAL A . n A 1 165 CYS 165 163 163 CYS CYS A . n A 1 166 PHE 166 164 164 PHE PHE A . n A 1 167 ASP 167 165 165 ASP ASP A . n A 1 168 PHE 168 166 166 PHE PHE A . n A 1 169 ASN 169 167 167 ASN ASN A . n A 1 170 TYR 170 168 168 TYR TYR A . n A 1 171 ARG 171 169 169 ARG ARG A . n A 1 172 PRO 172 170 170 PRO PRO A . n A 1 173 SER 173 171 171 SER SER A . n A 1 174 LEU 174 172 172 LEU LEU A . n A 1 175 ASN 175 173 173 ASN ASN A . n A 1 176 THR 176 174 174 THR THR A . n A 1 177 ALA 177 175 175 ALA ALA A . n A 1 178 ASN 178 176 176 ASN ASN A . n A 1 179 SER 179 177 177 SER SER A . n A 1 180 ALA 180 178 178 ALA ALA A . n A 1 181 LEU 181 179 179 LEU LEU A . n A 1 182 PHE 182 180 180 PHE PHE A . n A 1 183 MSE 183 181 181 MSE MSE A . n A 1 184 ARG 184 182 182 ARG ARG A . n A 1 185 GLN 185 183 183 GLN GLN A . n A 1 186 GLN 186 184 184 GLN GLN A . n A 1 187 TYR 187 185 185 TYR TYR A . n A 1 188 GLU 188 186 186 GLU GLU A . n A 1 189 ARG 189 187 187 ARG ARG A . n A 1 190 ILE 190 188 188 ILE ILE A . n A 1 191 LEU 191 189 189 LEU LEU A . n A 1 192 PRO 192 190 190 PRO PRO A . n A 1 193 TYR 193 191 191 TYR TYR A . n A 1 194 CYS 194 192 192 CYS CYS A . n A 1 195 ASP 195 193 193 ASP ASP A . n A 1 196 ILE 196 194 194 ILE ILE A . n A 1 197 VAL 197 195 195 VAL VAL A . n A 1 198 PHE 198 196 196 PHE PHE A . n A 1 199 GLY 199 197 197 GLY GLY A . n A 1 200 SER 200 198 198 SER SER A . n A 1 201 ARG 201 199 199 ARG ARG A . n A 1 202 ARG 202 200 200 ARG ARG A . n A 1 203 ASP 203 201 201 ASP ASP A . n A 1 204 LEU 204 202 202 LEU LEU A . n A 1 205 VAL 205 203 203 VAL VAL A . n A 1 206 GLU 206 204 204 GLU GLU A . n A 1 207 LEU 207 205 205 LEU LEU A . n A 1 208 LEU 208 206 206 LEU LEU A . n A 1 209 GLY 209 207 207 GLY GLY A . n A 1 210 PHE 210 208 208 PHE PHE A . n A 1 211 ILE 211 209 209 ILE ILE A . n A 1 212 PRO 212 210 210 PRO PRO A . n A 1 213 ARG 213 211 211 ARG ARG A . n A 1 214 GLU 214 212 212 GLU GLU A . n A 1 215 ASP 215 213 213 ASP ASP A . n A 1 216 LEU 216 214 214 LEU LEU A . n A 1 217 GLU 217 215 215 GLU GLU A . n A 1 218 GLY 218 216 216 GLY GLY A . n A 1 219 GLU 219 217 217 GLU GLU A . n A 1 220 ALA 220 218 218 ALA ALA A . n A 1 221 GLN 221 219 219 GLN GLN A . n A 1 222 GLU 222 220 220 GLU GLU A . n A 1 223 THR 223 221 221 THR THR A . n A 1 224 GLU 224 222 222 GLU GLU A . n A 1 225 LEU 225 223 223 LEU LEU A . n A 1 226 ILE 226 224 224 ILE ILE A . n A 1 227 GLN 227 225 225 GLN GLN A . n A 1 228 ARG 228 226 226 ARG ARG A . n A 1 229 PHE 229 227 227 PHE PHE A . n A 1 230 MSE 230 228 228 MSE MSE A . n A 1 231 SER 231 229 229 SER SER A . n A 1 232 GLN 232 230 230 GLN GLN A . n A 1 233 TYR 233 231 231 TYR TYR A . n A 1 234 ASN 234 232 232 ASN ASN A . n A 1 235 LEU 235 233 233 LEU LEU A . n A 1 236 GLU 236 234 234 GLU GLU A . n A 1 237 TRP 237 235 235 TRP TRP A . n A 1 238 PHE 238 236 236 PHE PHE A . n A 1 239 ALA 239 237 237 ALA ALA A . n A 1 240 GLY 240 238 238 GLY GLY A . n A 1 241 THR 241 239 239 THR THR A . n A 1 242 THR 242 240 240 THR THR A . n A 1 243 ARG 243 241 241 ARG ARG A . n A 1 244 SER 244 242 242 SER SER A . n A 1 245 HIS 245 243 243 HIS HIS A . n A 1 246 SER 246 244 244 SER SER A . n A 1 247 GLN 247 245 245 GLN GLN A . n A 1 248 ASN 248 246 246 ASN ASN A . n A 1 249 GLN 249 247 247 GLN GLN A . n A 1 250 ASN 250 248 248 ASN ASN A . n A 1 251 TYR 251 249 249 TYR TYR A . n A 1 252 LEU 252 250 250 LEU LEU A . n A 1 253 SER 253 251 251 SER SER A . n A 1 254 GLY 254 252 252 GLY GLY A . n A 1 255 TYR 255 253 253 TYR TYR A . n A 1 256 LEU 256 254 254 LEU LEU A . n A 1 257 TYR 257 255 255 TYR TYR A . n A 1 258 THR 258 256 256 THR THR A . n A 1 259 GLN 259 257 257 GLN GLN A . n A 1 260 ASN 260 258 258 ASN ASN A . n A 1 261 GLU 261 259 259 GLU GLU A . n A 1 262 TYR 262 260 260 TYR TYR A . n A 1 263 GLN 263 261 261 GLN GLN A . n A 1 264 GLN 264 262 262 GLN GLN A . n A 1 265 SER 265 263 263 SER SER A . n A 1 266 GLU 266 264 264 GLU GLU A . n A 1 267 LYS 267 265 265 LYS LYS A . n A 1 268 ARG 268 266 266 ARG ARG A . n A 1 269 PRO 269 267 267 PRO PRO A . n A 1 270 LEU 270 268 268 LEU LEU A . n A 1 271 LEU 271 269 269 LEU LEU A . n A 1 272 ASN 272 270 270 ASN ASN A . n A 1 273 LEU 273 271 271 LEU LEU A . n A 1 274 ASP 274 272 272 ASP ASP A . n A 1 275 ARG 275 273 273 ARG ARG A . n A 1 276 ILE 276 274 274 ILE ILE A . n A 1 277 GLY 277 275 275 GLY GLY A . n A 1 278 ALA 278 276 276 ALA ALA A . n A 1 279 GLY 279 277 277 GLY GLY A . n A 1 280 ASP 280 278 278 ASP ASP A . n A 1 281 ALA 281 279 279 ALA ALA A . n A 1 282 TYR 282 280 280 TYR TYR A . n A 1 283 ALA 283 281 281 ALA ALA A . n A 1 284 ALA 284 282 282 ALA ALA A . n A 1 285 GLY 285 283 283 GLY GLY A . n A 1 286 ILE 286 284 284 ILE ILE A . n A 1 287 LEU 287 285 285 LEU LEU A . n A 1 288 TYR 288 286 286 TYR TYR A . n A 1 289 GLY 289 287 287 GLY GLY A . n A 1 290 TYR 290 288 288 TYR TYR A . n A 1 291 SER 291 289 289 SER SER A . n A 1 292 GLN 292 290 290 GLN GLN A . n A 1 293 ASN 293 291 291 ASN ASN A . n A 1 294 TRP 294 292 292 TRP TRP A . n A 1 295 SER 295 293 293 SER SER A . n A 1 296 LEU 296 294 294 LEU LEU A . n A 1 297 GLU 297 295 295 GLU GLU A . n A 1 298 LYS 298 296 296 LYS LYS A . n A 1 299 ALA 299 297 297 ALA ALA A . n A 1 300 VAL 300 298 298 VAL VAL A . n A 1 301 THR 301 299 299 THR THR A . n A 1 302 PHE 302 300 300 PHE PHE A . n A 1 303 ALA 303 301 301 ALA ALA A . n A 1 304 THR 304 302 302 THR THR A . n A 1 305 VAL 305 303 303 VAL VAL A . n A 1 306 ASN 306 304 304 ASN ASN A . n A 1 307 GLY 307 305 305 GLY GLY A . n A 1 308 VAL 308 306 306 VAL VAL A . n A 1 309 LEU 309 307 307 LEU LEU A . n A 1 310 ALA 310 308 308 ALA ALA A . n A 1 311 HIS 311 309 309 HIS HIS A . n A 1 312 THR 312 310 310 THR THR A . n A 1 313 ILE 313 311 311 ILE ILE A . n A 1 314 GLN 314 312 312 GLN GLN A . n A 1 315 GLY 315 313 313 GLY GLY A . n A 1 316 ASP 316 314 314 ASP ASP A . n A 1 317 ILE 317 315 315 ILE ILE A . n A 1 318 PRO 318 316 316 PRO PRO A . n A 1 319 LEU 319 317 317 LEU LEU A . n A 1 320 THR 320 318 318 THR THR A . n A 1 321 THR 321 319 319 THR THR A . n A 1 322 VAL 322 320 320 VAL VAL A . n A 1 323 LYS 323 321 321 LYS LYS A . n A 1 324 GLN 324 322 322 GLN GLN A . n A 1 325 VAL 325 323 323 VAL VAL A . n A 1 326 ASN 326 324 324 ASN ASN A . n A 1 327 HIS 327 325 325 HIS HIS A . n A 1 328 VAL 328 326 326 VAL VAL A . n A 1 329 LEU 329 327 327 LEU LEU A . n A 1 330 GLU 330 328 328 GLU GLU A . n A 1 331 HIS 331 329 329 HIS HIS A . n A 1 332 PRO 332 330 330 PRO PRO A . n A 1 333 ASN 333 331 331 ASN ASN A . n A 1 334 ILE 334 332 332 ILE ILE A . n A 1 335 ASP 335 333 333 ASP ASP A . n A 1 336 LEU 336 334 334 LEU LEU A . n A 1 337 ILE 337 335 335 ILE ILE A . n A 1 338 ARG 338 336 336 ARG ARG A . n A 1 339 GLU 339 337 337 GLU GLU A . n A 1 340 GLY 340 338 338 GLY GLY A . n A 1 341 HIS 341 339 339 HIS HIS A . n A 1 342 HIS 342 340 ? ? ? A . n A 1 343 HIS 343 341 ? ? ? A . n A 1 344 HIS 344 342 ? ? ? A . n A 1 345 HIS 345 343 ? ? ? A . n A 1 346 HIS 346 344 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'New York SGX Research Center for Structural Genomics' _pdbx_SG_project.initial_of_center NYSGXRC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 401 401 SO4 SO4 A . C 3 MG 1 601 601 MG MG2 A . D 4 HOH 1 1 1 HOH TIP A . D 4 HOH 2 345 2 HOH TIP A . D 4 HOH 3 346 4 HOH TIP A . D 4 HOH 4 347 5 HOH TIP A . D 4 HOH 5 348 6 HOH TIP A . D 4 HOH 6 349 7 HOH TIP A . D 4 HOH 7 350 8 HOH TIP A . D 4 HOH 8 351 9 HOH TIP A . D 4 HOH 9 352 10 HOH TIP A . D 4 HOH 10 353 11 HOH TIP A . D 4 HOH 11 354 12 HOH TIP A . D 4 HOH 12 355 14 HOH TIP A . D 4 HOH 13 356 15 HOH TIP A . D 4 HOH 14 357 16 HOH TIP A . D 4 HOH 15 358 17 HOH TIP A . D 4 HOH 16 359 18 HOH TIP A . D 4 HOH 17 360 19 HOH TIP A . D 4 HOH 18 361 20 HOH TIP A . D 4 HOH 19 362 21 HOH TIP A . D 4 HOH 20 363 22 HOH TIP A . D 4 HOH 21 364 23 HOH TIP A . D 4 HOH 22 365 24 HOH TIP A . D 4 HOH 23 366 25 HOH TIP A . D 4 HOH 24 367 26 HOH TIP A . D 4 HOH 25 368 27 HOH TIP A . D 4 HOH 26 369 28 HOH TIP A . D 4 HOH 27 370 29 HOH TIP A . D 4 HOH 28 371 30 HOH TIP A . D 4 HOH 29 372 31 HOH TIP A . D 4 HOH 30 373 32 HOH TIP A . D 4 HOH 31 374 33 HOH TIP A . D 4 HOH 32 375 34 HOH TIP A . D 4 HOH 33 376 35 HOH TIP A . D 4 HOH 34 377 37 HOH TIP A . D 4 HOH 35 378 38 HOH TIP A . D 4 HOH 36 379 39 HOH TIP A . D 4 HOH 37 380 41 HOH TIP A . D 4 HOH 38 381 42 HOH TIP A . D 4 HOH 39 382 43 HOH TIP A . D 4 HOH 40 383 44 HOH TIP A . D 4 HOH 41 384 45 HOH TIP A . D 4 HOH 42 385 46 HOH TIP A . D 4 HOH 43 386 47 HOH TIP A . D 4 HOH 44 387 48 HOH TIP A . D 4 HOH 45 388 49 HOH TIP A . D 4 HOH 46 389 50 HOH TIP A . D 4 HOH 47 390 51 HOH TIP A . D 4 HOH 48 391 52 HOH TIP A . D 4 HOH 49 392 54 HOH TIP A . D 4 HOH 50 393 55 HOH TIP A . D 4 HOH 51 394 56 HOH TIP A . D 4 HOH 52 395 57 HOH TIP A . D 4 HOH 53 396 58 HOH TIP A . D 4 HOH 54 397 59 HOH TIP A . D 4 HOH 55 398 60 HOH TIP A . D 4 HOH 56 399 61 HOH TIP A . D 4 HOH 57 400 62 HOH TIP A . D 4 HOH 58 402 63 HOH TIP A . D 4 HOH 59 403 64 HOH TIP A . D 4 HOH 60 404 65 HOH TIP A . D 4 HOH 61 405 66 HOH TIP A . D 4 HOH 62 406 67 HOH TIP A . D 4 HOH 63 407 68 HOH TIP A . D 4 HOH 64 408 69 HOH TIP A . D 4 HOH 65 409 70 HOH TIP A . D 4 HOH 66 410 71 HOH TIP A . D 4 HOH 67 411 72 HOH TIP A . D 4 HOH 68 412 73 HOH TIP A . D 4 HOH 69 413 74 HOH TIP A . D 4 HOH 70 414 75 HOH TIP A . D 4 HOH 71 415 76 HOH TIP A . D 4 HOH 72 416 78 HOH TIP A . D 4 HOH 73 417 79 HOH TIP A . D 4 HOH 74 418 80 HOH TIP A . D 4 HOH 75 419 81 HOH TIP A . D 4 HOH 76 420 82 HOH TIP A . D 4 HOH 77 421 83 HOH TIP A . D 4 HOH 78 422 84 HOH TIP A . D 4 HOH 79 423 85 HOH TIP A . D 4 HOH 80 424 88 HOH TIP A . D 4 HOH 81 425 89 HOH TIP A . D 4 HOH 82 426 90 HOH TIP A . D 4 HOH 83 427 91 HOH TIP A . D 4 HOH 84 428 92 HOH TIP A . D 4 HOH 85 429 93 HOH TIP A . D 4 HOH 86 430 95 HOH TIP A . D 4 HOH 87 431 97 HOH TIP A . D 4 HOH 88 432 98 HOH TIP A . D 4 HOH 89 433 99 HOH TIP A . D 4 HOH 90 434 100 HOH TIP A . D 4 HOH 91 435 102 HOH TIP A . D 4 HOH 92 436 105 HOH TIP A . D 4 HOH 93 437 107 HOH TIP A . D 4 HOH 94 438 109 HOH TIP A . D 4 HOH 95 439 110 HOH TIP A . D 4 HOH 96 440 111 HOH TIP A . D 4 HOH 97 441 112 HOH TIP A . D 4 HOH 98 442 113 HOH TIP A . D 4 HOH 99 443 114 HOH TIP A . D 4 HOH 100 444 115 HOH TIP A . D 4 HOH 101 445 117 HOH TIP A . D 4 HOH 102 446 118 HOH TIP A . D 4 HOH 103 447 119 HOH TIP A . D 4 HOH 104 448 121 HOH TIP A . D 4 HOH 105 449 122 HOH TIP A . D 4 HOH 106 450 123 HOH TIP A . D 4 HOH 107 451 124 HOH TIP A . D 4 HOH 108 452 125 HOH TIP A . D 4 HOH 109 453 126 HOH TIP A . D 4 HOH 110 454 127 HOH TIP A . D 4 HOH 111 455 129 HOH TIP A . D 4 HOH 112 456 131 HOH TIP A . D 4 HOH 113 457 132 HOH TIP A . D 4 HOH 114 458 133 HOH TIP A . D 4 HOH 115 459 134 HOH TIP A . D 4 HOH 116 460 136 HOH TIP A . D 4 HOH 117 461 137 HOH TIP A . D 4 HOH 118 462 139 HOH TIP A . D 4 HOH 119 463 140 HOH TIP A . D 4 HOH 120 464 141 HOH TIP A . D 4 HOH 121 465 144 HOH TIP A . D 4 HOH 122 466 145 HOH TIP A . D 4 HOH 123 467 146 HOH TIP A . D 4 HOH 124 468 147 HOH TIP A . D 4 HOH 125 469 148 HOH TIP A . D 4 HOH 126 470 149 HOH TIP A . D 4 HOH 127 471 151 HOH TIP A . D 4 HOH 128 472 152 HOH TIP A . D 4 HOH 129 473 154 HOH TIP A . D 4 HOH 130 474 155 HOH TIP A . D 4 HOH 131 475 156 HOH TIP A . D 4 HOH 132 476 157 HOH TIP A . D 4 HOH 133 477 159 HOH TIP A . D 4 HOH 134 478 162 HOH TIP A . D 4 HOH 135 479 163 HOH TIP A . D 4 HOH 136 480 165 HOH TIP A . D 4 HOH 137 481 166 HOH TIP A . D 4 HOH 138 482 167 HOH TIP A . D 4 HOH 139 483 168 HOH TIP A . D 4 HOH 140 484 169 HOH TIP A . D 4 HOH 141 485 170 HOH TIP A . D 4 HOH 142 486 171 HOH TIP A . D 4 HOH 143 487 175 HOH TIP A . D 4 HOH 144 488 176 HOH TIP A . D 4 HOH 145 489 177 HOH TIP A . D 4 HOH 146 490 178 HOH TIP A . D 4 HOH 147 491 182 HOH TIP A . D 4 HOH 148 492 183 HOH TIP A . D 4 HOH 149 493 184 HOH TIP A . D 4 HOH 150 494 187 HOH TIP A . D 4 HOH 151 495 190 HOH TIP A . D 4 HOH 152 496 191 HOH TIP A . D 4 HOH 153 497 192 HOH TIP A . D 4 HOH 154 498 193 HOH TIP A . D 4 HOH 155 499 195 HOH TIP A . D 4 HOH 156 500 196 HOH TIP A . D 4 HOH 157 501 198 HOH TIP A . D 4 HOH 158 502 199 HOH TIP A . D 4 HOH 159 503 201 HOH TIP A . D 4 HOH 160 504 202 HOH TIP A . D 4 HOH 161 505 203 HOH TIP A . D 4 HOH 162 506 204 HOH TIP A . D 4 HOH 163 507 205 HOH TIP A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 12 A MSE 10 ? MET SELENOMETHIONINE 2 A MSE 22 A MSE 20 ? MET SELENOMETHIONINE 3 A MSE 31 A MSE 29 ? MET SELENOMETHIONINE 4 A MSE 94 A MSE 92 ? MET SELENOMETHIONINE 5 A MSE 132 A MSE 130 ? MET SELENOMETHIONINE 6 A MSE 183 A MSE 181 ? MET SELENOMETHIONINE 7 A MSE 230 A MSE 228 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 29210 ? 1 MORE -260 ? 1 'SSA (A^2)' 72480 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5000000000 -0.8660254038 0.0000000000 145.5640000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5000000000 0.8660254038 0.0000000000 72.7820000000 -0.8660254038 -0.5000000000 0.0000000000 126.0621218765 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/2 0.5000000000 -0.8660254038 0.0000000000 72.7820000000 -0.8660254038 -0.5000000000 0.0000000000 126.0621218765 0.0000000000 0.0000000000 -1.0000000000 63.2005000000 5 'crystal symmetry operation' 11_655 -x+y+1,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 145.5640000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 63.2005000000 6 'crystal symmetry operation' 12_555 x,x-y,-z+1/2 0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 63.2005000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 499 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? D HOH . ? A HOH 1 ? 1_555 MG ? C MG . ? A MG 601 ? 1_555 O ? A ASP 274 ? A ASP 272 ? 1_555 80.8 ? 2 O ? D HOH . ? A HOH 1 ? 1_555 MG ? C MG . ? A MG 601 ? 1_555 O ? A ILE 276 ? A ILE 274 ? 1_555 121.0 ? 3 O ? A ASP 274 ? A ASP 272 ? 1_555 MG ? C MG . ? A MG 601 ? 1_555 O ? A ILE 276 ? A ILE 274 ? 1_555 116.6 ? 4 O ? D HOH . ? A HOH 1 ? 1_555 MG ? C MG . ? A MG 601 ? 1_555 O ? D HOH . ? A HOH 357 ? 1_555 87.2 ? 5 O ? A ASP 274 ? A ASP 272 ? 1_555 MG ? C MG . ? A MG 601 ? 1_555 O ? D HOH . ? A HOH 357 ? 1_555 159.1 ? 6 O ? A ILE 276 ? A ILE 274 ? 1_555 MG ? C MG . ? A MG 601 ? 1_555 O ? D HOH . ? A HOH 357 ? 1_555 84.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-12-15 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2021-02-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' audit_author 2 3 'Structure model' citation_author 3 3 'Structure model' pdbx_struct_conn_angle 4 3 'Structure model' struct_conn 5 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_audit_author.identifier_ORCID' 2 3 'Structure model' '_citation_author.identifier_ORCID' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.value' 14 3 'Structure model' '_struct_conn.pdbx_dist_value' 15 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 16 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 17 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 18 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 19 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 20 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 21 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 22 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 23 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 24 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 25 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 26 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 27 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 28 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 29 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CBASS 'data collection' . ? 1 SHELXCD phasing . ? 2 SHARP phasing . ? 3 CNS refinement 1.1 ? 4 DENZO 'data reduction' . ? 5 HKL-2000 'data scaling' . ? 6 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 17 ? ? 52.99 -126.02 2 1 GLN A 46 ? ? 73.67 33.64 3 1 THR A 53 ? ? -171.15 -172.32 4 1 ASP A 83 ? ? -142.99 -21.43 5 1 ARG A 211 ? ? -64.80 96.69 6 1 ASN A 246 ? ? 89.23 -42.36 7 1 ASP A 272 ? ? -160.78 110.79 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -3 ? A MSE 1 2 1 Y 1 A HIS 340 ? A HIS 342 3 1 Y 1 A HIS 341 ? A HIS 343 4 1 Y 1 A HIS 342 ? A HIS 344 5 1 Y 1 A HIS 343 ? A HIS 345 6 1 Y 1 A HIS 344 ? A HIS 346 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 'MAGNESIUM ION' MG 4 water HOH #