HEADER TRANSPORT PROTEIN 28-NOV-09 3KV0 TITLE CRYSTAL STRUCTURE OF HET-C2: A FUNGAL GLYCOLIPID TRANSFER PROTEIN TITLE 2 (GLTP) COMPND MOL_ID: 1; COMPND 2 MOLECULE: HET-C2; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PODOSPORA ANSERINA; SOURCE 3 ORGANISM_TAXID: 5145; SOURCE 4 GENE: HET-C2; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-SUMO KEYWDS HET-C2, GLTP, GLYCOLIPID TRANSFER PROTEIN, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.K.SIMANSHU,R.KENOTH,R.E.BROWN,D.J.PATEL REVDAT 4 06-SEP-23 3KV0 1 SEQADV LINK REVDAT 3 26-MAY-10 3KV0 1 JRNL REVDAT 2 02-MAR-10 3KV0 1 JRNL REVDAT 1 23-FEB-10 3KV0 0 JRNL AUTH R.KENOTH,D.K.SIMANSHU,R.K.KAMLEKAR,H.M.PIKE,J.G.MOLOTKOVSKY, JRNL AUTH 2 L.M.BENSON,H.R.BERGEN,F.G.PRENDERGAST,L.MALININA, JRNL AUTH 3 S.Y.VENYAMINOV,D.J.PATEL,R.E.BROWN JRNL TITL STRUCTURAL DETERMINATION AND TRYPTOPHAN FLUORESCENCE OF JRNL TITL 2 HETEROKARYON INCOMPATIBILITY C2 PROTEIN (HET-C2), A FUNGAL JRNL TITL 3 GLYCOLIPID TRANSFER PROTEIN (GLTP), PROVIDE NOVEL INSIGHTS JRNL TITL 4 INTO GLYCOLIPID SPECIFICITY AND MEMBRANE INTERACTION BY THE JRNL TITL 5 GLTP FOLD. JRNL REF J.BIOL.CHEM. V. 285 13066 2010 JRNL REFN ISSN 0021-9258 JRNL PMID 20164530 JRNL DOI 10.1074/JBC.M109.093203 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0070 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 20958 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.218 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1132 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1465 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.75 REMARK 3 BIN R VALUE (WORKING SET) : 0.2880 REMARK 3 BIN FREE R VALUE SET COUNT : 65 REMARK 3 BIN FREE R VALUE : 0.2990 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1564 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 118 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.88000 REMARK 3 B22 (A**2) : -0.88000 REMARK 3 B33 (A**2) : 1.77000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.145 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.137 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.096 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.229 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1606 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1105 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2169 ; 1.512 ; 2.020 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2700 ; 0.924 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 196 ; 4.996 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 69 ;34.970 ;24.058 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 252 ;15.222 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;21.171 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 256 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1724 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 320 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 973 ; 1.019 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 391 ; 0.219 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1569 ; 1.860 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 633 ; 2.653 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 598 ; 4.387 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3KV0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-DEC-09. REMARK 100 THE DEPOSITION ID IS D_1000056481. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-MAY-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5-6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : CRYOGENICALLY-COOLED SINGLE REMARK 200 CRYSTAL SI(111) SIDE BOUNCE REMARK 200 MONOCHROMATOR. OPTIONAL SI(311) REMARK 200 TO ACHIVE 13.474 KEV REMARK 200 OPTICS : CRYOGENICALLY-COOLED SINGLE REMARK 200 CRYSTAL SI(111) SIDE BOUNCE REMARK 200 MONOCHROMATOR. OPTIONAL SI(311) REMARK 200 TO ACHIVE 13.474 KEV. VERTICAL REMARK 200 AND HORIZANTAL FOCUSSING MIRRORS REMARK 200 IN KIRKPATRICK-BAEZ GEOMETRY. REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22551 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 8.700 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 36.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.00 REMARK 200 R MERGE FOR SHELL (I) : 0.35900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.950 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: HUMAN APO-GLTP (PDB: 1SWX) REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS (PH 5.5-6.5) AND 25 % REMARK 280 PEG 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 28.95700 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 48.46300 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 48.46300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 14.47850 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 48.46300 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 48.46300 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 43.43550 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 48.46300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.46300 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 14.47850 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 48.46300 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.46300 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 43.43550 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 28.95700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 57.91400 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 ALA A 4 REMARK 465 ALA A 5 REMARK 465 VAL A 6 REMARK 465 VAL A 7 REMARK 465 GLN A 8 REMARK 465 ILE A 9 REMARK 465 PRO A 10 REMARK 465 ALA A 11 REMARK 465 GLY A 12 REMARK 465 ALA A 13 REMARK 465 MLY A 99 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MLY A 20 CH1 CH2 REMARK 470 MLY A 32 CH1 CH2 REMARK 470 MLY A 97 CH1 CH2 REMARK 470 THR A 98 OG1 CG2 REMARK 470 MLY A 166 CH1 CH2 REMARK 470 MLY A 178 CH1 CH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 96 7.41 -68.25 REMARK 500 GLU A 129 152.30 -44.95 REMARK 500 THR A 142 -74.58 -120.39 REMARK 500 GLU A 205 -38.47 -38.82 REMARK 500 REMARK 500 REMARK: NULL DBREF 3KV0 A 1 208 UNP Q01494 Q01494_PODAN 1 208 SEQADV 3KV0 SER A 0 UNP Q01494 EXPRESSION TAG SEQRES 1 A 209 SER MET ALA ALA ALA ALA VAL VAL GLN ILE PRO ALA GLY SEQRES 2 A 209 ALA THR PHE LEU GLU THR PHE MLY MLY SER PHE VAL ASP SEQRES 3 A 209 VAL PRO ILE ASP ALA GLU MLY GLY ASN ALA ILE SER THR SEQRES 4 A 209 ALA GLU PHE LEU GLU ALA ALA GLU SER LEU THR THR MET SEQRES 5 A 209 PHE ASP VAL LEU GLY SER ILE ALA PHE SER PRO VAL MLY SEQRES 6 A 209 THR ASP MET LEU GLY ASN VAL GLU MLY ILE ARG MLY ARG SEQRES 7 A 209 MET LEU ALA ALA PRO LEU GLU SER GLN ASN ILE GLN ASP SEQRES 8 A 209 LEU VAL ARG ASN GLU LEU MLY THR MLY SER HIS THR ALA SEQRES 9 A 209 THR GLU GLY LEU LEU TRP LEU VAL ARG GLY LEU GLU PHE SEQRES 10 A 209 THR CYS ILE ALA LEU SER MLY ASN ILE GLY SER THR GLU SEQRES 11 A 209 GLU LEU ALA ASP SER PHE ARG GLY SER TYR ARG VAL THR SEQRES 12 A 209 LEU MLY PRO HIS HIS SER PHE LEU VAL MLY PRO ILE PHE SEQRES 13 A 209 SER ALA ALA MET SER ALA CYS PRO TYR ARG MLY ASP PHE SEQRES 14 A 209 TYR ALA MLY LEU GLY ASP ASP GLU GLN MLY VAL GLN GLU SEQRES 15 A 209 GLU LEU ARG GLU TYR LEU VAL ALA LEU ASP MLY ILE VAL SEQRES 16 A 209 ASN ILE LEU MLY ARG PHE LEU GLU SER MLY GLU ALA MLY SEQRES 17 A 209 TRP MODRES 3KV0 MLY A 20 LYS N-DIMETHYL-LYSINE MODRES 3KV0 MLY A 21 LYS N-DIMETHYL-LYSINE MODRES 3KV0 MLY A 32 LYS N-DIMETHYL-LYSINE MODRES 3KV0 MLY A 64 LYS N-DIMETHYL-LYSINE MODRES 3KV0 MLY A 73 LYS N-DIMETHYL-LYSINE MODRES 3KV0 MLY A 76 LYS N-DIMETHYL-LYSINE MODRES 3KV0 MLY A 97 LYS N-DIMETHYL-LYSINE MODRES 3KV0 MLY A 123 LYS N-DIMETHYL-LYSINE MODRES 3KV0 MLY A 144 LYS N-DIMETHYL-LYSINE MODRES 3KV0 MLY A 152 LYS N-DIMETHYL-LYSINE MODRES 3KV0 MLY A 166 LYS N-DIMETHYL-LYSINE MODRES 3KV0 MLY A 171 LYS N-DIMETHYL-LYSINE MODRES 3KV0 MLY A 178 LYS N-DIMETHYL-LYSINE MODRES 3KV0 MLY A 192 LYS N-DIMETHYL-LYSINE MODRES 3KV0 MLY A 198 LYS N-DIMETHYL-LYSINE MODRES 3KV0 MLY A 204 LYS N-DIMETHYL-LYSINE MODRES 3KV0 MLY A 207 LYS N-DIMETHYL-LYSINE HET MLY A 20 9 HET MLY A 21 11 HET MLY A 32 9 HET MLY A 64 11 HET MLY A 73 11 HET MLY A 76 11 HET MLY A 97 9 HET MLY A 123 11 HET MLY A 144 11 HET MLY A 152 11 HET MLY A 166 9 HET MLY A 171 11 HET MLY A 178 9 HET MLY A 192 11 HET MLY A 198 11 HET MLY A 204 11 HET MLY A 207 11 HETNAM MLY N-DIMETHYL-LYSINE FORMUL 1 MLY 17(C8 H18 N2 O2) FORMUL 2 HOH *118(H2 O) HELIX 1 1 THR A 14 PHE A 19 5 6 HELIX 2 2 SER A 22 VAL A 26 5 5 HELIX 3 3 ALA A 30 GLY A 33 5 4 HELIX 4 4 SER A 37 SER A 57 1 21 HELIX 5 5 PHE A 60 ALA A 81 1 22 HELIX 6 6 PRO A 82 SER A 85 5 4 HELIX 7 7 ASN A 87 LEU A 96 1 10 HELIX 8 8 HIS A 101 GLY A 126 1 26 HELIX 9 9 GLU A 130 THR A 142 1 13 HELIX 10 10 LEU A 143 HIS A 147 5 5 HELIX 11 11 VAL A 151 ALA A 161 1 11 HELIX 12 12 TYR A 164 GLY A 173 1 10 HELIX 13 13 ASP A 175 SER A 203 1 29 HELIX 14 14 MLY A 204 MLY A 207 5 4 SHEET 1 A 2 ILE A 28 ASP A 29 0 SHEET 2 A 2 ALA A 35 ILE A 36 -1 O ALA A 35 N ASP A 29 LINK C PHE A 19 N MLY A 20 1555 1555 1.33 LINK C MLY A 20 N MLY A 21 1555 1555 1.35 LINK C MLY A 21 N SER A 22 1555 1555 1.33 LINK C GLU A 31 N MLY A 32 1555 1555 1.33 LINK C MLY A 32 N GLY A 33 1555 1555 1.33 LINK C VAL A 63 N MLY A 64 1555 1555 1.33 LINK C MLY A 64 N THR A 65 1555 1555 1.34 LINK C GLU A 72 N MLY A 73 1555 1555 1.32 LINK C MLY A 73 N ILE A 74 1555 1555 1.34 LINK C ARG A 75 N MLY A 76 1555 1555 1.33 LINK C MLY A 76 N ARG A 77 1555 1555 1.32 LINK C LEU A 96 N MLY A 97 1555 1555 1.33 LINK C MLY A 97 N THR A 98 1555 1555 1.32 LINK C SER A 122 N MLY A 123 1555 1555 1.34 LINK C MLY A 123 N ASN A 124 1555 1555 1.33 LINK C LEU A 143 N MLY A 144 1555 1555 1.32 LINK C MLY A 144 N PRO A 145 1555 1555 1.35 LINK C VAL A 151 N MLY A 152 1555 1555 1.34 LINK C MLY A 152 N PRO A 153 1555 1555 1.36 LINK C ARG A 165 N MLY A 166 1555 1555 1.34 LINK C MLY A 166 N ASP A 167 1555 1555 1.33 LINK C ALA A 170 N MLY A 171 1555 1555 1.34 LINK C MLY A 171 N LEU A 172 1555 1555 1.34 LINK C GLN A 177 N MLY A 178 1555 1555 1.33 LINK C MLY A 178 N VAL A 179 1555 1555 1.33 LINK C ASP A 191 N MLY A 192 1555 1555 1.33 LINK C MLY A 192 N ILE A 193 1555 1555 1.34 LINK C LEU A 197 N MLY A 198 1555 1555 1.33 LINK C MLY A 198 N ARG A 199 1555 1555 1.33 LINK C SER A 203 N MLY A 204 1555 1555 1.34 LINK C MLY A 204 N GLU A 205 1555 1555 1.32 LINK C ALA A 206 N MLY A 207 1555 1555 1.33 LINK C MLY A 207 N TRP A 208 1555 1555 1.33 CRYST1 96.926 96.926 57.914 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010317 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010317 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017267 0.00000