data_3KVB # _entry.id 3KVB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3KVB pdb_00003kvb 10.2210/pdb3kvb/pdb RCSB RCSB056492 ? ? WWPDB D_1000056492 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3KV9 'Structure of KIAA1718 Jumonji domain' unspecified PDB 3KVA 'Structure of KIAA1718 Jumonji domain in complex with alpha-ketoglutarate' unspecified PDB 3KV4 . unspecified PDB 3KV6 . unspecified PDB 3KV5 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3KVB _pdbx_database_status.recvd_initial_deposition_date 2009-11-29 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Horton, J.R.' 1 'Upadhyay, A.K.' 2 'Qi, H.H.' 3 'Zhang, X.' 4 'Shi, Y.' 5 'Cheng, X.' 6 # _citation.id primary _citation.title 'Enzymatic and structural insights for substrate specificity of a family of jumonji histone lysine demethylases.' _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_volume 17 _citation.page_first 38 _citation.page_last 43 _citation.year 2010 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1545-9993 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20023638 _citation.pdbx_database_id_DOI 10.1038/nsmb.1753 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Horton, J.R.' 1 ? primary 'Upadhyay, A.K.' 2 ? primary 'Qi, H.H.' 3 ? primary 'Zhang, X.' 4 ? primary 'Shi, Y.' 5 ? primary 'Cheng, X.' 6 ? # _cell.entry_id 3KVB _cell.length_a 78.3 _cell.length_b 78.3 _cell.length_c 289.1 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3KVB _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'JmjC domain-containing histone demethylation protein 1D' 46081.043 1 2.-.-.- ? 'Residues 92-488' ? 2 non-polymer syn 'NICKEL (II) ION' 58.693 2 ? ? ? ? 3 non-polymer syn 'OXYGEN MOLECULE' 31.999 1 ? ? ? ? 4 non-polymer syn N-OXALYLGLYCINE 147.086 1 ? ? ? ? 5 water nat water 18.015 38 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SLMKKRRNWHRHDYTEIDDGSKPVQAGTRTFIKELRSRVFPSADEIIIKMHGSQLTQRYLEKHGFDVPIMVPKLDDLGLR LPSPTFSVMDVERYVGGDKVIDVIDVARQADSKMTLHNYVKYFMNPNRPKVLNVISLEFSDTKMSELVEVPDIAKKLSWV ENYWPDDSVFPKPFVQKYCLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDK VDKCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEMEKRLKTPDLFKFPFFEAICWFVAKNLL ETLKELREDGFQPQTYLVQGVKALHTALKLWMKKELVSEHAFEIPDNVRPGHLIKELSKVIRAIEEENGKPVKSQGI ; _entity_poly.pdbx_seq_one_letter_code_can ;SLMKKRRNWHRHDYTEIDDGSKPVQAGTRTFIKELRSRVFPSADEIIIKMHGSQLTQRYLEKHGFDVPIMVPKLDDLGLR LPSPTFSVMDVERYVGGDKVIDVIDVARQADSKMTLHNYVKYFMNPNRPKVLNVISLEFSDTKMSELVEVPDIAKKLSWV ENYWPDDSVFPKPFVQKYCLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDK VDKCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEMEKRLKTPDLFKFPFFEAICWFVAKNLL ETLKELREDGFQPQTYLVQGVKALHTALKLWMKKELVSEHAFEIPDNVRPGHLIKELSKVIRAIEEENGKPVKSQGI ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 LEU n 1 3 MET n 1 4 LYS n 1 5 LYS n 1 6 ARG n 1 7 ARG n 1 8 ASN n 1 9 TRP n 1 10 HIS n 1 11 ARG n 1 12 HIS n 1 13 ASP n 1 14 TYR n 1 15 THR n 1 16 GLU n 1 17 ILE n 1 18 ASP n 1 19 ASP n 1 20 GLY n 1 21 SER n 1 22 LYS n 1 23 PRO n 1 24 VAL n 1 25 GLN n 1 26 ALA n 1 27 GLY n 1 28 THR n 1 29 ARG n 1 30 THR n 1 31 PHE n 1 32 ILE n 1 33 LYS n 1 34 GLU n 1 35 LEU n 1 36 ARG n 1 37 SER n 1 38 ARG n 1 39 VAL n 1 40 PHE n 1 41 PRO n 1 42 SER n 1 43 ALA n 1 44 ASP n 1 45 GLU n 1 46 ILE n 1 47 ILE n 1 48 ILE n 1 49 LYS n 1 50 MET n 1 51 HIS n 1 52 GLY n 1 53 SER n 1 54 GLN n 1 55 LEU n 1 56 THR n 1 57 GLN n 1 58 ARG n 1 59 TYR n 1 60 LEU n 1 61 GLU n 1 62 LYS n 1 63 HIS n 1 64 GLY n 1 65 PHE n 1 66 ASP n 1 67 VAL n 1 68 PRO n 1 69 ILE n 1 70 MET n 1 71 VAL n 1 72 PRO n 1 73 LYS n 1 74 LEU n 1 75 ASP n 1 76 ASP n 1 77 LEU n 1 78 GLY n 1 79 LEU n 1 80 ARG n 1 81 LEU n 1 82 PRO n 1 83 SER n 1 84 PRO n 1 85 THR n 1 86 PHE n 1 87 SER n 1 88 VAL n 1 89 MET n 1 90 ASP n 1 91 VAL n 1 92 GLU n 1 93 ARG n 1 94 TYR n 1 95 VAL n 1 96 GLY n 1 97 GLY n 1 98 ASP n 1 99 LYS n 1 100 VAL n 1 101 ILE n 1 102 ASP n 1 103 VAL n 1 104 ILE n 1 105 ASP n 1 106 VAL n 1 107 ALA n 1 108 ARG n 1 109 GLN n 1 110 ALA n 1 111 ASP n 1 112 SER n 1 113 LYS n 1 114 MET n 1 115 THR n 1 116 LEU n 1 117 HIS n 1 118 ASN n 1 119 TYR n 1 120 VAL n 1 121 LYS n 1 122 TYR n 1 123 PHE n 1 124 MET n 1 125 ASN n 1 126 PRO n 1 127 ASN n 1 128 ARG n 1 129 PRO n 1 130 LYS n 1 131 VAL n 1 132 LEU n 1 133 ASN n 1 134 VAL n 1 135 ILE n 1 136 SER n 1 137 LEU n 1 138 GLU n 1 139 PHE n 1 140 SER n 1 141 ASP n 1 142 THR n 1 143 LYS n 1 144 MET n 1 145 SER n 1 146 GLU n 1 147 LEU n 1 148 VAL n 1 149 GLU n 1 150 VAL n 1 151 PRO n 1 152 ASP n 1 153 ILE n 1 154 ALA n 1 155 LYS n 1 156 LYS n 1 157 LEU n 1 158 SER n 1 159 TRP n 1 160 VAL n 1 161 GLU n 1 162 ASN n 1 163 TYR n 1 164 TRP n 1 165 PRO n 1 166 ASP n 1 167 ASP n 1 168 SER n 1 169 VAL n 1 170 PHE n 1 171 PRO n 1 172 LYS n 1 173 PRO n 1 174 PHE n 1 175 VAL n 1 176 GLN n 1 177 LYS n 1 178 TYR n 1 179 CYS n 1 180 LEU n 1 181 MET n 1 182 GLY n 1 183 VAL n 1 184 GLN n 1 185 ASP n 1 186 SER n 1 187 TYR n 1 188 THR n 1 189 ASP n 1 190 PHE n 1 191 HIS n 1 192 ILE n 1 193 ASP n 1 194 PHE n 1 195 GLY n 1 196 GLY n 1 197 THR n 1 198 SER n 1 199 VAL n 1 200 TRP n 1 201 TYR n 1 202 HIS n 1 203 VAL n 1 204 LEU n 1 205 TRP n 1 206 GLY n 1 207 GLU n 1 208 LYS n 1 209 ILE n 1 210 PHE n 1 211 TYR n 1 212 LEU n 1 213 ILE n 1 214 LYS n 1 215 PRO n 1 216 THR n 1 217 ASP n 1 218 GLU n 1 219 ASN n 1 220 LEU n 1 221 ALA n 1 222 ARG n 1 223 TYR n 1 224 GLU n 1 225 SER n 1 226 TRP n 1 227 SER n 1 228 SER n 1 229 SER n 1 230 VAL n 1 231 THR n 1 232 GLN n 1 233 SER n 1 234 GLU n 1 235 VAL n 1 236 PHE n 1 237 PHE n 1 238 GLY n 1 239 ASP n 1 240 LYS n 1 241 VAL n 1 242 ASP n 1 243 LYS n 1 244 CYS n 1 245 TYR n 1 246 LYS n 1 247 CYS n 1 248 VAL n 1 249 VAL n 1 250 LYS n 1 251 GLN n 1 252 GLY n 1 253 HIS n 1 254 THR n 1 255 LEU n 1 256 PHE n 1 257 VAL n 1 258 PRO n 1 259 THR n 1 260 GLY n 1 261 TRP n 1 262 ILE n 1 263 HIS n 1 264 ALA n 1 265 VAL n 1 266 LEU n 1 267 THR n 1 268 SER n 1 269 GLN n 1 270 ASP n 1 271 CYS n 1 272 MET n 1 273 ALA n 1 274 PHE n 1 275 GLY n 1 276 GLY n 1 277 ASN n 1 278 PHE n 1 279 LEU n 1 280 HIS n 1 281 ASN n 1 282 LEU n 1 283 ASN n 1 284 ILE n 1 285 GLY n 1 286 MET n 1 287 GLN n 1 288 LEU n 1 289 ARG n 1 290 CYS n 1 291 TYR n 1 292 GLU n 1 293 MET n 1 294 GLU n 1 295 LYS n 1 296 ARG n 1 297 LEU n 1 298 LYS n 1 299 THR n 1 300 PRO n 1 301 ASP n 1 302 LEU n 1 303 PHE n 1 304 LYS n 1 305 PHE n 1 306 PRO n 1 307 PHE n 1 308 PHE n 1 309 GLU n 1 310 ALA n 1 311 ILE n 1 312 CYS n 1 313 TRP n 1 314 PHE n 1 315 VAL n 1 316 ALA n 1 317 LYS n 1 318 ASN n 1 319 LEU n 1 320 LEU n 1 321 GLU n 1 322 THR n 1 323 LEU n 1 324 LYS n 1 325 GLU n 1 326 LEU n 1 327 ARG n 1 328 GLU n 1 329 ASP n 1 330 GLY n 1 331 PHE n 1 332 GLN n 1 333 PRO n 1 334 GLN n 1 335 THR n 1 336 TYR n 1 337 LEU n 1 338 VAL n 1 339 GLN n 1 340 GLY n 1 341 VAL n 1 342 LYS n 1 343 ALA n 1 344 LEU n 1 345 HIS n 1 346 THR n 1 347 ALA n 1 348 LEU n 1 349 LYS n 1 350 LEU n 1 351 TRP n 1 352 MET n 1 353 LYS n 1 354 LYS n 1 355 GLU n 1 356 LEU n 1 357 VAL n 1 358 SER n 1 359 GLU n 1 360 HIS n 1 361 ALA n 1 362 PHE n 1 363 GLU n 1 364 ILE n 1 365 PRO n 1 366 ASP n 1 367 ASN n 1 368 VAL n 1 369 ARG n 1 370 PRO n 1 371 GLY n 1 372 HIS n 1 373 LEU n 1 374 ILE n 1 375 LYS n 1 376 GLU n 1 377 LEU n 1 378 SER n 1 379 LYS n 1 380 VAL n 1 381 ILE n 1 382 ARG n 1 383 ALA n 1 384 ILE n 1 385 GLU n 1 386 GLU n 1 387 GLU n 1 388 ASN n 1 389 GLY n 1 390 LYS n 1 391 PRO n 1 392 VAL n 1 393 LYS n 1 394 SER n 1 395 GLN n 1 396 GLY n 1 397 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'JHDM1D, KIAA1718' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details GST-fusion _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)CodonPlus' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code JHD1D_HUMAN _struct_ref.pdbx_db_accession Q6ZMT4 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SLMKKRRNWHRHDYTEIDDGSKPVQAGTRTFIKELRSRVFPSADEIIIKMHGSQLTQRYLEKHGFDVPIMVPKLDDLGLR LPSPTFSVMDVERYVGGDKVIDVIDVARQADSKMTLHNYVKYFMNPNRPKVLNVISLEFSDTKMSELVEVPDIAKKLSWV ENYWPDDSVFPKPFVQKYCLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDK VDKCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEMEKRLKTPDLFKFPFFEAICWFVAKNLL ETLKELREDGFQPQTYLVQGVKALHTALKLWMKKELVSEHAFEIPDNVRPGHLIKELSKVIRAIEEENGKPVKSQGI ; _struct_ref.pdbx_align_begin 92 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3KVB _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 397 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q6ZMT4 _struct_ref_seq.db_align_beg 92 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 488 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 92 _struct_ref_seq.pdbx_auth_seq_align_end 488 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NI non-polymer . 'NICKEL (II) ION' ? 'Ni 2' 58.693 OGA non-polymer . N-OXALYLGLYCINE ? 'C4 H5 N O5' 147.086 OXY non-polymer . 'OXYGEN MOLECULE' ? O2 31.999 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3KVB _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.78 _exptl_crystal.density_percent_sol 55.69 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.4 _exptl_crystal_grow.pdbx_details '17-20% (v/v) polyethylene glycol 5000 MME, 0.2 M CaCl2, and 0.1 M BisTris pH 6.4, VAPOR DIFFUSION, HANGING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2008-08-06 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-BM' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-BM _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.entry_id 3KVB _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 33.67 _reflns.d_resolution_high 2.69 _reflns.number_obs 15320 _reflns.number_all ? _reflns.percent_possible_obs 98.3 _reflns.pdbx_Rmerge_I_obs 0.085 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.3 _reflns.B_iso_Wilson_estimate 37.7 _reflns.pdbx_redundancy 14.4 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.69 _reflns_shell.d_res_low 2.79 _reflns_shell.percent_possible_all 86.3 _reflns_shell.Rmerge_I_obs 0.394 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.6 _reflns_shell.pdbx_redundancy 8.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1303 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3KVB _refine.ls_number_reflns_obs 14477 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF 358678.44 _refine.pdbx_data_cutoff_low_absF 0.000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 33.67 _refine.ls_d_res_high 2.69 _refine.ls_percent_reflns_obs 93.4 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.216 _refine.ls_R_factor_R_free 0.267 _refine.ls_R_factor_R_free_error 0.010 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 711 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 54.9 _refine.aniso_B[1][1] 10.87 _refine.aniso_B[2][2] 10.87 _refine.aniso_B[3][3] -21.73 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.35 _refine.solvent_model_param_bsol 41.1141 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB entry 3KV6' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 3KVB _refine_analyze.Luzzati_coordinate_error_obs 0.35 _refine_analyze.Luzzati_sigma_a_obs 0.29 _refine_analyze.Luzzati_d_res_low_obs 35.00 _refine_analyze.Luzzati_coordinate_error_free 0.49 _refine_analyze.Luzzati_sigma_a_free 0.40 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2941 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 14 _refine_hist.number_atoms_solvent 38 _refine_hist.number_atoms_total 2993 _refine_hist.d_res_high 2.69 _refine_hist.d_res_low 33.67 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.3 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 22.9 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.78 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.30 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.22 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.98 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.07 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 2.69 _refine_ls_shell.d_res_low 2.79 _refine_ls_shell.number_reflns_R_work 1079 _refine_ls_shell.R_factor_R_work 0.287 _refine_ls_shell.percent_reflns_obs 75.6 _refine_ls_shell.R_factor_R_free 0.279 _refine_ls_shell.R_factor_R_free_error 0.037 _refine_ls_shell.percent_reflns_R_free 5.1 _refine_ls_shell.number_reflns_R_free 58 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1079 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 ion.param ion.top 'X-RAY DIFFRACTION' 3 water.param water.top # _struct.entry_id 3KVB _struct.title 'Structure of KIAA1718 Jumonji domain in complex with N-oxalylglycine' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3KVB _struct_keywords.pdbx_keywords 'H3K4ME3 BINDING PROTEIN, TRANSFERASE' _struct_keywords.text 'Jumonji domain lysine demethylase, Metal-binding, Iron, Nickel ion, H3K4ME3 BINDING PROTEIN, TRANSFERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 28 ? ARG A 38 ? THR A 119 ARG A 129 1 ? 11 HELX_P HELX_P2 2 SER A 42 ? ILE A 46 ? SER A 133 ILE A 137 5 ? 5 HELX_P HELX_P3 3 THR A 56 ? GLY A 64 ? THR A 147 GLY A 155 1 ? 9 HELX_P HELX_P4 4 SER A 87 ? GLY A 96 ? SER A 178 GLY A 187 1 ? 10 HELX_P HELX_P5 5 LEU A 116 ? MET A 124 ? LEU A 207 MET A 215 1 ? 9 HELX_P HELX_P6 6 THR A 142 ? VAL A 148 ? THR A 233 VAL A 239 5 ? 7 HELX_P HELX_P7 7 PRO A 151 ? SER A 158 ? PRO A 242 SER A 249 1 ? 8 HELX_P HELX_P8 8 SER A 158 ? TRP A 164 ? SER A 249 TRP A 255 1 ? 7 HELX_P HELX_P9 9 ASP A 193 ? THR A 197 ? ASP A 284 THR A 288 5 ? 5 HELX_P HELX_P10 10 THR A 216 ? SER A 228 ? THR A 307 SER A 319 1 ? 13 HELX_P HELX_P11 11 SER A 229 ? VAL A 235 ? SER A 320 VAL A 326 5 ? 7 HELX_P HELX_P12 12 PHE A 236 ? VAL A 241 ? PHE A 327 VAL A 332 5 ? 6 HELX_P HELX_P13 13 ASN A 283 ? LYS A 298 ? ASN A 374 LYS A 389 1 ? 16 HELX_P HELX_P14 14 THR A 299 ? LYS A 304 ? THR A 390 LYS A 395 5 ? 6 HELX_P HELX_P15 15 PHE A 307 ? GLU A 328 ? PHE A 398 GLU A 419 1 ? 22 HELX_P HELX_P16 16 GLN A 334 ? LYS A 353 ? GLN A 425 LYS A 444 1 ? 20 HELX_P HELX_P17 17 LEU A 356 ? ILE A 364 ? LEU A 447 ILE A 455 5 ? 9 HELX_P HELX_P18 18 ARG A 369 ? GLU A 387 ? ARG A 460 GLU A 478 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A HIS 191 NE2 ? ? ? 1_555 B NI . NI ? ? A HIS 282 A NI 489 1_555 ? ? ? ? ? ? ? 2.482 ? ? metalc2 metalc ? ? A ASP 193 OD1 ? ? ? 1_555 B NI . NI ? ? A ASP 284 A NI 489 1_555 ? ? ? ? ? ? ? 2.371 ? ? metalc3 metalc ? ? A HIS 263 NE2 ? ? ? 1_555 B NI . NI ? ? A HIS 354 A NI 489 1_555 ? ? ? ? ? ? ? 2.364 ? ? metalc4 metalc ? ? B NI . NI ? ? ? 1_555 E OGA . "O2'" ? ? A NI 489 A OGA 5798 1_555 ? ? ? ? ? ? ? 1.927 ? ? metalc5 metalc ? ? B NI . NI ? ? ? 1_555 E OGA . O2 ? ? A NI 489 A OGA 5798 1_555 ? ? ? ? ? ? ? 2.036 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 48 ? LYS A 49 ? ILE A 139 LYS A 140 A 2 ILE A 69 ? VAL A 71 ? ILE A 160 VAL A 162 A 3 THR A 254 ? VAL A 257 ? THR A 345 VAL A 348 A 4 SER A 198 ? ILE A 213 ? SER A 289 ILE A 304 A 5 ILE A 262 ? PHE A 278 ? ILE A 353 PHE A 369 A 6 TYR A 187 ? HIS A 191 ? TYR A 278 HIS A 282 B 1 ASP A 111 ? THR A 115 ? ASP A 202 THR A 206 B 2 VAL A 100 ? ASP A 105 ? VAL A 191 ASP A 196 B 3 LEU A 132 ? GLU A 138 ? LEU A 223 GLU A 229 B 4 TYR A 178 ? GLY A 182 ? TYR A 269 GLY A 273 B 5 ILE A 262 ? PHE A 278 ? ILE A 353 PHE A 369 B 6 SER A 198 ? ILE A 213 ? SER A 289 ILE A 304 B 7 TYR A 245 ? VAL A 249 ? TYR A 336 VAL A 340 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 48 ? N ILE A 139 O MET A 70 ? O MET A 161 A 2 3 N VAL A 71 ? N VAL A 162 O THR A 254 ? O THR A 345 A 3 4 O LEU A 255 ? O LEU A 346 N TYR A 201 ? N TYR A 292 A 4 5 N HIS A 202 ? N HIS A 293 O PHE A 274 ? O PHE A 365 A 5 6 O VAL A 265 ? O VAL A 356 N THR A 188 ? N THR A 279 B 1 2 O MET A 114 ? O MET A 205 N ILE A 101 ? N ILE A 192 B 2 3 N ILE A 104 ? N ILE A 195 O ASN A 133 ? O ASN A 224 B 3 4 N LEU A 137 ? N LEU A 228 O CYS A 179 ? O CYS A 270 B 4 5 N LEU A 180 ? N LEU A 271 O ALA A 273 ? O ALA A 364 B 5 6 O PHE A 274 ? O PHE A 365 N HIS A 202 ? N HIS A 293 B 6 7 N LYS A 208 ? N LYS A 299 O VAL A 249 ? O VAL A 340 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NI 489 ? 4 'BINDING SITE FOR RESIDUE NI A 489' AC2 Software A NI 490 ? 5 'BINDING SITE FOR RESIDUE NI A 490' AC3 Software A OXY 491 ? 2 'BINDING SITE FOR RESIDUE OXY A 491' AC4 Software A OGA 5798 ? 10 'BINDING SITE FOR RESIDUE OGA A 5798' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 HIS A 191 ? HIS A 282 . ? 1_555 ? 2 AC1 4 ASP A 193 ? ASP A 284 . ? 1_555 ? 3 AC1 4 HIS A 263 ? HIS A 354 . ? 1_555 ? 4 AC1 4 OGA E . ? OGA A 5798 . ? 1_555 ? 5 AC2 5 SER A 158 ? SER A 249 . ? 1_555 ? 6 AC2 5 TRP A 159 ? TRP A 250 . ? 1_555 ? 7 AC2 5 VAL A 160 ? VAL A 251 . ? 1_555 ? 8 AC2 5 PHE A 278 ? PHE A 369 . ? 1_555 ? 9 AC2 5 LEU A 279 ? LEU A 370 . ? 1_555 ? 10 AC3 2 VAL A 199 ? VAL A 290 . ? 1_555 ? 11 AC3 2 ASN A 277 ? ASN A 368 . ? 1_555 ? 12 AC4 10 ASN A 133 ? ASN A 224 . ? 1_555 ? 13 AC4 10 ILE A 135 ? ILE A 226 . ? 1_555 ? 14 AC4 10 THR A 188 ? THR A 279 . ? 1_555 ? 15 AC4 10 HIS A 191 ? HIS A 282 . ? 1_555 ? 16 AC4 10 ASP A 193 ? ASP A 284 . ? 1_555 ? 17 AC4 10 TYR A 201 ? TYR A 292 . ? 1_555 ? 18 AC4 10 LYS A 208 ? LYS A 299 . ? 1_555 ? 19 AC4 10 HIS A 263 ? HIS A 354 . ? 1_555 ? 20 AC4 10 VAL A 265 ? VAL A 356 . ? 1_555 ? 21 AC4 10 NI B . ? NI A 489 . ? 1_555 ? # _database_PDB_matrix.entry_id 3KVB _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3KVB _atom_sites.fract_transf_matrix[1][1] 0.012771 _atom_sites.fract_transf_matrix[1][2] 0.007374 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014747 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003459 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NI O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 92 ? ? ? A . n A 1 2 LEU 2 93 ? ? ? A . n A 1 3 MET 3 94 ? ? ? A . n A 1 4 LYS 4 95 ? ? ? A . n A 1 5 LYS 5 96 ? ? ? A . n A 1 6 ARG 6 97 ? ? ? A . n A 1 7 ARG 7 98 ? ? ? A . n A 1 8 ASN 8 99 ? ? ? A . n A 1 9 TRP 9 100 ? ? ? A . n A 1 10 HIS 10 101 ? ? ? A . n A 1 11 ARG 11 102 ? ? ? A . n A 1 12 HIS 12 103 ? ? ? A . n A 1 13 ASP 13 104 ? ? ? A . n A 1 14 TYR 14 105 ? ? ? A . n A 1 15 THR 15 106 ? ? ? A . n A 1 16 GLU 16 107 ? ? ? A . n A 1 17 ILE 17 108 ? ? ? A . n A 1 18 ASP 18 109 ? ? ? A . n A 1 19 ASP 19 110 ? ? ? A . n A 1 20 GLY 20 111 ? ? ? A . n A 1 21 SER 21 112 ? ? ? A . n A 1 22 LYS 22 113 ? ? ? A . n A 1 23 PRO 23 114 114 PRO PRO A . n A 1 24 VAL 24 115 115 VAL VAL A . n A 1 25 GLN 25 116 116 GLN GLN A . n A 1 26 ALA 26 117 117 ALA ALA A . n A 1 27 GLY 27 118 118 GLY GLY A . n A 1 28 THR 28 119 119 THR THR A . n A 1 29 ARG 29 120 120 ARG ARG A . n A 1 30 THR 30 121 121 THR THR A . n A 1 31 PHE 31 122 122 PHE PHE A . n A 1 32 ILE 32 123 123 ILE ILE A . n A 1 33 LYS 33 124 124 LYS LYS A . n A 1 34 GLU 34 125 125 GLU GLU A . n A 1 35 LEU 35 126 126 LEU LEU A . n A 1 36 ARG 36 127 127 ARG ARG A . n A 1 37 SER 37 128 128 SER SER A . n A 1 38 ARG 38 129 129 ARG ARG A . n A 1 39 VAL 39 130 130 VAL VAL A . n A 1 40 PHE 40 131 131 PHE PHE A . n A 1 41 PRO 41 132 132 PRO PRO A . n A 1 42 SER 42 133 133 SER SER A . n A 1 43 ALA 43 134 134 ALA ALA A . n A 1 44 ASP 44 135 135 ASP ASP A . n A 1 45 GLU 45 136 136 GLU GLU A . n A 1 46 ILE 46 137 137 ILE ILE A . n A 1 47 ILE 47 138 138 ILE ILE A . n A 1 48 ILE 48 139 139 ILE ILE A . n A 1 49 LYS 49 140 140 LYS LYS A . n A 1 50 MET 50 141 141 MET MET A . n A 1 51 HIS 51 142 142 HIS HIS A . n A 1 52 GLY 52 143 143 GLY GLY A . n A 1 53 SER 53 144 144 SER SER A . n A 1 54 GLN 54 145 145 GLN GLN A . n A 1 55 LEU 55 146 146 LEU LEU A . n A 1 56 THR 56 147 147 THR THR A . n A 1 57 GLN 57 148 148 GLN GLN A . n A 1 58 ARG 58 149 149 ARG ARG A . n A 1 59 TYR 59 150 150 TYR TYR A . n A 1 60 LEU 60 151 151 LEU LEU A . n A 1 61 GLU 61 152 152 GLU GLU A . n A 1 62 LYS 62 153 153 LYS ALA A . n A 1 63 HIS 63 154 154 HIS HIS A . n A 1 64 GLY 64 155 155 GLY GLY A . n A 1 65 PHE 65 156 156 PHE PHE A . n A 1 66 ASP 66 157 157 ASP ASP A . n A 1 67 VAL 67 158 158 VAL VAL A . n A 1 68 PRO 68 159 159 PRO PRO A . n A 1 69 ILE 69 160 160 ILE ILE A . n A 1 70 MET 70 161 161 MET MET A . n A 1 71 VAL 71 162 162 VAL VAL A . n A 1 72 PRO 72 163 163 PRO PRO A . n A 1 73 LYS 73 164 164 LYS LYS A . n A 1 74 LEU 74 165 165 LEU LEU A . n A 1 75 ASP 75 166 166 ASP ASP A . n A 1 76 ASP 76 167 167 ASP ASP A . n A 1 77 LEU 77 168 168 LEU LEU A . n A 1 78 GLY 78 169 169 GLY GLY A . n A 1 79 LEU 79 170 170 LEU LEU A . n A 1 80 ARG 80 171 171 ARG ARG A . n A 1 81 LEU 81 172 172 LEU LEU A . n A 1 82 PRO 82 173 173 PRO PRO A . n A 1 83 SER 83 174 174 SER SER A . n A 1 84 PRO 84 175 175 PRO PRO A . n A 1 85 THR 85 176 176 THR THR A . n A 1 86 PHE 86 177 177 PHE PHE A . n A 1 87 SER 87 178 178 SER SER A . n A 1 88 VAL 88 179 179 VAL VAL A . n A 1 89 MET 89 180 180 MET MET A . n A 1 90 ASP 90 181 181 ASP ASP A . n A 1 91 VAL 91 182 182 VAL VAL A . n A 1 92 GLU 92 183 183 GLU GLU A . n A 1 93 ARG 93 184 184 ARG ALA A . n A 1 94 TYR 94 185 185 TYR TYR A . n A 1 95 VAL 95 186 186 VAL VAL A . n A 1 96 GLY 96 187 187 GLY GLY A . n A 1 97 GLY 97 188 188 GLY GLY A . n A 1 98 ASP 98 189 189 ASP ASP A . n A 1 99 LYS 99 190 190 LYS LYS A . n A 1 100 VAL 100 191 191 VAL VAL A . n A 1 101 ILE 101 192 192 ILE ILE A . n A 1 102 ASP 102 193 193 ASP ASP A . n A 1 103 VAL 103 194 194 VAL VAL A . n A 1 104 ILE 104 195 195 ILE ILE A . n A 1 105 ASP 105 196 196 ASP ASP A . n A 1 106 VAL 106 197 197 VAL VAL A . n A 1 107 ALA 107 198 198 ALA ALA A . n A 1 108 ARG 108 199 199 ARG ARG A . n A 1 109 GLN 109 200 200 GLN GLN A . n A 1 110 ALA 110 201 201 ALA ALA A . n A 1 111 ASP 111 202 202 ASP ASP A . n A 1 112 SER 112 203 203 SER SER A . n A 1 113 LYS 113 204 204 LYS LYS A . n A 1 114 MET 114 205 205 MET MET A . n A 1 115 THR 115 206 206 THR THR A . n A 1 116 LEU 116 207 207 LEU LEU A . n A 1 117 HIS 117 208 208 HIS HIS A . n A 1 118 ASN 118 209 209 ASN ASN A . n A 1 119 TYR 119 210 210 TYR TYR A . n A 1 120 VAL 120 211 211 VAL VAL A . n A 1 121 LYS 121 212 212 LYS LYS A . n A 1 122 TYR 122 213 213 TYR TYR A . n A 1 123 PHE 123 214 214 PHE PHE A . n A 1 124 MET 124 215 215 MET MET A . n A 1 125 ASN 125 216 216 ASN ASN A . n A 1 126 PRO 126 217 217 PRO PRO A . n A 1 127 ASN 127 218 218 ASN ALA A . n A 1 128 ARG 128 219 219 ARG ARG A . n A 1 129 PRO 129 220 220 PRO PRO A . n A 1 130 LYS 130 221 221 LYS LYS A . n A 1 131 VAL 131 222 222 VAL VAL A . n A 1 132 LEU 132 223 223 LEU LEU A . n A 1 133 ASN 133 224 224 ASN ASN A . n A 1 134 VAL 134 225 225 VAL VAL A . n A 1 135 ILE 135 226 226 ILE ILE A . n A 1 136 SER 136 227 227 SER SER A . n A 1 137 LEU 137 228 228 LEU LEU A . n A 1 138 GLU 138 229 229 GLU GLU A . n A 1 139 PHE 139 230 230 PHE PHE A . n A 1 140 SER 140 231 231 SER SER A . n A 1 141 ASP 141 232 232 ASP ASP A . n A 1 142 THR 142 233 233 THR THR A . n A 1 143 LYS 143 234 234 LYS ALA A . n A 1 144 MET 144 235 235 MET MET A . n A 1 145 SER 145 236 236 SER SER A . n A 1 146 GLU 146 237 237 GLU GLU A . n A 1 147 LEU 147 238 238 LEU LEU A . n A 1 148 VAL 148 239 239 VAL VAL A . n A 1 149 GLU 149 240 240 GLU ALA A . n A 1 150 VAL 150 241 241 VAL VAL A . n A 1 151 PRO 151 242 242 PRO PRO A . n A 1 152 ASP 152 243 243 ASP ASP A . n A 1 153 ILE 153 244 244 ILE ILE A . n A 1 154 ALA 154 245 245 ALA ALA A . n A 1 155 LYS 155 246 246 LYS LYS A . n A 1 156 LYS 156 247 247 LYS LYS A . n A 1 157 LEU 157 248 248 LEU LEU A . n A 1 158 SER 158 249 249 SER SER A . n A 1 159 TRP 159 250 250 TRP TRP A . n A 1 160 VAL 160 251 251 VAL VAL A . n A 1 161 GLU 161 252 252 GLU GLU A . n A 1 162 ASN 162 253 253 ASN ASN A . n A 1 163 TYR 163 254 254 TYR TYR A . n A 1 164 TRP 164 255 255 TRP TRP A . n A 1 165 PRO 165 256 256 PRO PRO A . n A 1 166 ASP 166 257 257 ASP ASP A . n A 1 167 ASP 167 258 258 ASP ASP A . n A 1 168 SER 168 259 259 SER SER A . n A 1 169 VAL 169 260 260 VAL VAL A . n A 1 170 PHE 170 261 261 PHE PHE A . n A 1 171 PRO 171 262 262 PRO PRO A . n A 1 172 LYS 172 263 263 LYS LYS A . n A 1 173 PRO 173 264 264 PRO PRO A . n A 1 174 PHE 174 265 265 PHE PHE A . n A 1 175 VAL 175 266 266 VAL VAL A . n A 1 176 GLN 176 267 267 GLN GLN A . n A 1 177 LYS 177 268 268 LYS LYS A . n A 1 178 TYR 178 269 269 TYR TYR A . n A 1 179 CYS 179 270 270 CYS CYS A . n A 1 180 LEU 180 271 271 LEU LEU A . n A 1 181 MET 181 272 272 MET MET A . n A 1 182 GLY 182 273 273 GLY GLY A . n A 1 183 VAL 183 274 274 VAL VAL A . n A 1 184 GLN 184 275 275 GLN GLN A . n A 1 185 ASP 185 276 276 ASP ASP A . n A 1 186 SER 186 277 277 SER SER A . n A 1 187 TYR 187 278 278 TYR TYR A . n A 1 188 THR 188 279 279 THR THR A . n A 1 189 ASP 189 280 280 ASP ASP A . n A 1 190 PHE 190 281 281 PHE PHE A . n A 1 191 HIS 191 282 282 HIS HIS A . n A 1 192 ILE 192 283 283 ILE ILE A . n A 1 193 ASP 193 284 284 ASP ASP A . n A 1 194 PHE 194 285 285 PHE PHE A . n A 1 195 GLY 195 286 286 GLY GLY A . n A 1 196 GLY 196 287 287 GLY GLY A . n A 1 197 THR 197 288 288 THR THR A . n A 1 198 SER 198 289 289 SER SER A . n A 1 199 VAL 199 290 290 VAL VAL A . n A 1 200 TRP 200 291 291 TRP TRP A . n A 1 201 TYR 201 292 292 TYR TYR A . n A 1 202 HIS 202 293 293 HIS HIS A . n A 1 203 VAL 203 294 294 VAL VAL A . n A 1 204 LEU 204 295 295 LEU LEU A . n A 1 205 TRP 205 296 296 TRP TRP A . n A 1 206 GLY 206 297 297 GLY GLY A . n A 1 207 GLU 207 298 298 GLU GLU A . n A 1 208 LYS 208 299 299 LYS LYS A . n A 1 209 ILE 209 300 300 ILE ILE A . n A 1 210 PHE 210 301 301 PHE PHE A . n A 1 211 TYR 211 302 302 TYR TYR A . n A 1 212 LEU 212 303 303 LEU LEU A . n A 1 213 ILE 213 304 304 ILE ILE A . n A 1 214 LYS 214 305 305 LYS LYS A . n A 1 215 PRO 215 306 306 PRO PRO A . n A 1 216 THR 216 307 307 THR THR A . n A 1 217 ASP 217 308 308 ASP ASP A . n A 1 218 GLU 218 309 309 GLU GLU A . n A 1 219 ASN 219 310 310 ASN ASN A . n A 1 220 LEU 220 311 311 LEU LEU A . n A 1 221 ALA 221 312 312 ALA ALA A . n A 1 222 ARG 222 313 313 ARG ARG A . n A 1 223 TYR 223 314 314 TYR TYR A . n A 1 224 GLU 224 315 315 GLU GLU A . n A 1 225 SER 225 316 316 SER SER A . n A 1 226 TRP 226 317 317 TRP TRP A . n A 1 227 SER 227 318 318 SER SER A . n A 1 228 SER 228 319 319 SER SER A . n A 1 229 SER 229 320 320 SER SER A . n A 1 230 VAL 230 321 321 VAL VAL A . n A 1 231 THR 231 322 322 THR THR A . n A 1 232 GLN 232 323 323 GLN GLN A . n A 1 233 SER 233 324 324 SER SER A . n A 1 234 GLU 234 325 325 GLU GLU A . n A 1 235 VAL 235 326 326 VAL VAL A . n A 1 236 PHE 236 327 327 PHE PHE A . n A 1 237 PHE 237 328 328 PHE PHE A . n A 1 238 GLY 238 329 329 GLY GLY A . n A 1 239 ASP 239 330 330 ASP ASP A . n A 1 240 LYS 240 331 331 LYS LYS A . n A 1 241 VAL 241 332 332 VAL VAL A . n A 1 242 ASP 242 333 333 ASP ASP A . n A 1 243 LYS 243 334 334 LYS LYS A . n A 1 244 CYS 244 335 335 CYS CYS A . n A 1 245 TYR 245 336 336 TYR TYR A . n A 1 246 LYS 246 337 337 LYS LYS A . n A 1 247 CYS 247 338 338 CYS CYS A . n A 1 248 VAL 248 339 339 VAL VAL A . n A 1 249 VAL 249 340 340 VAL VAL A . n A 1 250 LYS 250 341 341 LYS LYS A . n A 1 251 GLN 251 342 342 GLN GLN A . n A 1 252 GLY 252 343 343 GLY GLY A . n A 1 253 HIS 253 344 344 HIS HIS A . n A 1 254 THR 254 345 345 THR THR A . n A 1 255 LEU 255 346 346 LEU LEU A . n A 1 256 PHE 256 347 347 PHE PHE A . n A 1 257 VAL 257 348 348 VAL VAL A . n A 1 258 PRO 258 349 349 PRO PRO A . n A 1 259 THR 259 350 350 THR THR A . n A 1 260 GLY 260 351 351 GLY GLY A . n A 1 261 TRP 261 352 352 TRP TRP A . n A 1 262 ILE 262 353 353 ILE ILE A . n A 1 263 HIS 263 354 354 HIS HIS A . n A 1 264 ALA 264 355 355 ALA ALA A . n A 1 265 VAL 265 356 356 VAL VAL A . n A 1 266 LEU 266 357 357 LEU LEU A . n A 1 267 THR 267 358 358 THR THR A . n A 1 268 SER 268 359 359 SER SER A . n A 1 269 GLN 269 360 360 GLN GLN A . n A 1 270 ASP 270 361 361 ASP ASP A . n A 1 271 CYS 271 362 362 CYS CYS A . n A 1 272 MET 272 363 363 MET MET A . n A 1 273 ALA 273 364 364 ALA ALA A . n A 1 274 PHE 274 365 365 PHE PHE A . n A 1 275 GLY 275 366 366 GLY GLY A . n A 1 276 GLY 276 367 367 GLY GLY A . n A 1 277 ASN 277 368 368 ASN ASN A . n A 1 278 PHE 278 369 369 PHE PHE A . n A 1 279 LEU 279 370 370 LEU LEU A . n A 1 280 HIS 280 371 371 HIS HIS A . n A 1 281 ASN 281 372 372 ASN ASN A . n A 1 282 LEU 282 373 373 LEU LEU A . n A 1 283 ASN 283 374 374 ASN ASN A . n A 1 284 ILE 284 375 375 ILE ILE A . n A 1 285 GLY 285 376 376 GLY GLY A . n A 1 286 MET 286 377 377 MET MET A . n A 1 287 GLN 287 378 378 GLN GLN A . n A 1 288 LEU 288 379 379 LEU LEU A . n A 1 289 ARG 289 380 380 ARG ARG A . n A 1 290 CYS 290 381 381 CYS CYS A . n A 1 291 TYR 291 382 382 TYR TYR A . n A 1 292 GLU 292 383 383 GLU GLU A . n A 1 293 MET 293 384 384 MET MET A . n A 1 294 GLU 294 385 385 GLU GLU A . n A 1 295 LYS 295 386 386 LYS LYS A . n A 1 296 ARG 296 387 387 ARG ARG A . n A 1 297 LEU 297 388 388 LEU LEU A . n A 1 298 LYS 298 389 389 LYS LYS A . n A 1 299 THR 299 390 390 THR THR A . n A 1 300 PRO 300 391 391 PRO PRO A . n A 1 301 ASP 301 392 392 ASP ASP A . n A 1 302 LEU 302 393 393 LEU LEU A . n A 1 303 PHE 303 394 394 PHE PHE A . n A 1 304 LYS 304 395 395 LYS LYS A . n A 1 305 PHE 305 396 396 PHE PHE A . n A 1 306 PRO 306 397 397 PRO PRO A . n A 1 307 PHE 307 398 398 PHE PHE A . n A 1 308 PHE 308 399 399 PHE PHE A . n A 1 309 GLU 309 400 400 GLU GLU A . n A 1 310 ALA 310 401 401 ALA ALA A . n A 1 311 ILE 311 402 402 ILE ILE A . n A 1 312 CYS 312 403 403 CYS CYS A . n A 1 313 TRP 313 404 404 TRP TRP A . n A 1 314 PHE 314 405 405 PHE PHE A . n A 1 315 VAL 315 406 406 VAL VAL A . n A 1 316 ALA 316 407 407 ALA ALA A . n A 1 317 LYS 317 408 408 LYS LYS A . n A 1 318 ASN 318 409 409 ASN ASN A . n A 1 319 LEU 319 410 410 LEU LEU A . n A 1 320 LEU 320 411 411 LEU LEU A . n A 1 321 GLU 321 412 412 GLU GLU A . n A 1 322 THR 322 413 413 THR THR A . n A 1 323 LEU 323 414 414 LEU LEU A . n A 1 324 LYS 324 415 415 LYS LYS A . n A 1 325 GLU 325 416 416 GLU GLU A . n A 1 326 LEU 326 417 417 LEU LEU A . n A 1 327 ARG 327 418 418 ARG ALA A . n A 1 328 GLU 328 419 419 GLU GLU A . n A 1 329 ASP 329 420 420 ASP ASP A . n A 1 330 GLY 330 421 421 GLY GLY A . n A 1 331 PHE 331 422 422 PHE PHE A . n A 1 332 GLN 332 423 423 GLN GLN A . n A 1 333 PRO 333 424 424 PRO PRO A . n A 1 334 GLN 334 425 425 GLN GLN A . n A 1 335 THR 335 426 426 THR THR A . n A 1 336 TYR 336 427 427 TYR TYR A . n A 1 337 LEU 337 428 428 LEU LEU A . n A 1 338 VAL 338 429 429 VAL VAL A . n A 1 339 GLN 339 430 430 GLN GLN A . n A 1 340 GLY 340 431 431 GLY GLY A . n A 1 341 VAL 341 432 432 VAL VAL A . n A 1 342 LYS 342 433 433 LYS LYS A . n A 1 343 ALA 343 434 434 ALA ALA A . n A 1 344 LEU 344 435 435 LEU LEU A . n A 1 345 HIS 345 436 436 HIS HIS A . n A 1 346 THR 346 437 437 THR THR A . n A 1 347 ALA 347 438 438 ALA ALA A . n A 1 348 LEU 348 439 439 LEU LEU A . n A 1 349 LYS 349 440 440 LYS LYS A . n A 1 350 LEU 350 441 441 LEU LEU A . n A 1 351 TRP 351 442 442 TRP TRP A . n A 1 352 MET 352 443 443 MET MET A . n A 1 353 LYS 353 444 444 LYS LYS A . n A 1 354 LYS 354 445 445 LYS ALA A . n A 1 355 GLU 355 446 446 GLU GLU A . n A 1 356 LEU 356 447 447 LEU LEU A . n A 1 357 VAL 357 448 448 VAL VAL A . n A 1 358 SER 358 449 449 SER SER A . n A 1 359 GLU 359 450 450 GLU GLU A . n A 1 360 HIS 360 451 451 HIS HIS A . n A 1 361 ALA 361 452 452 ALA ALA A . n A 1 362 PHE 362 453 453 PHE PHE A . n A 1 363 GLU 363 454 454 GLU GLU A . n A 1 364 ILE 364 455 455 ILE ILE A . n A 1 365 PRO 365 456 456 PRO PRO A . n A 1 366 ASP 366 457 457 ASP ALA A . n A 1 367 ASN 367 458 458 ASN ASN A . n A 1 368 VAL 368 459 459 VAL VAL A . n A 1 369 ARG 369 460 460 ARG ARG A . n A 1 370 PRO 370 461 461 PRO PRO A . n A 1 371 GLY 371 462 462 GLY GLY A . n A 1 372 HIS 372 463 463 HIS HIS A . n A 1 373 LEU 373 464 464 LEU LEU A . n A 1 374 ILE 374 465 465 ILE ILE A . n A 1 375 LYS 375 466 466 LYS ALA A . n A 1 376 GLU 376 467 467 GLU GLU A . n A 1 377 LEU 377 468 468 LEU LEU A . n A 1 378 SER 378 469 469 SER ALA A . n A 1 379 LYS 379 470 470 LYS LYS A . n A 1 380 VAL 380 471 471 VAL VAL A . n A 1 381 ILE 381 472 472 ILE ILE A . n A 1 382 ARG 382 473 473 ARG ALA A . n A 1 383 ALA 383 474 474 ALA ALA A . n A 1 384 ILE 384 475 475 ILE ILE A . n A 1 385 GLU 385 476 476 GLU ALA A . n A 1 386 GLU 386 477 477 GLU ALA A . n A 1 387 GLU 387 478 478 GLU ALA A . n A 1 388 ASN 388 479 479 ASN ASN A . n A 1 389 GLY 389 480 ? ? ? A . n A 1 390 LYS 390 481 ? ? ? A . n A 1 391 PRO 391 482 ? ? ? A . n A 1 392 VAL 392 483 ? ? ? A . n A 1 393 LYS 393 484 ? ? ? A . n A 1 394 SER 394 485 ? ? ? A . n A 1 395 GLN 395 486 ? ? ? A . n A 1 396 GLY 396 487 ? ? ? A . n A 1 397 ILE 397 488 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NI 1 489 480 NI NI A . C 2 NI 1 490 481 NI NI A . D 3 OXY 1 491 482 OXY OXY A . E 4 OGA 1 5798 5798 OGA OGA A . F 5 HOH 1 1 1 HOH TIP A . F 5 HOH 2 2 2 HOH TIP A . F 5 HOH 3 3 3 HOH TIP A . F 5 HOH 4 4 4 HOH TIP A . F 5 HOH 5 5 5 HOH TIP A . F 5 HOH 6 6 6 HOH TIP A . F 5 HOH 7 7 7 HOH TIP A . F 5 HOH 8 8 8 HOH TIP A . F 5 HOH 9 9 9 HOH TIP A . F 5 HOH 10 10 10 HOH TIP A . F 5 HOH 11 11 11 HOH TIP A . F 5 HOH 12 12 12 HOH TIP A . F 5 HOH 13 13 13 HOH TIP A . F 5 HOH 14 14 14 HOH TIP A . F 5 HOH 15 15 15 HOH TIP A . F 5 HOH 16 16 16 HOH TIP A . F 5 HOH 17 17 17 HOH TIP A . F 5 HOH 18 18 18 HOH TIP A . F 5 HOH 19 19 19 HOH TIP A . F 5 HOH 20 20 20 HOH TIP A . F 5 HOH 21 21 21 HOH TIP A . F 5 HOH 22 22 22 HOH TIP A . F 5 HOH 23 23 23 HOH TIP A . F 5 HOH 24 24 24 HOH TIP A . F 5 HOH 25 25 25 HOH TIP A . F 5 HOH 26 26 26 HOH TIP A . F 5 HOH 27 27 27 HOH TIP A . F 5 HOH 28 28 28 HOH TIP A . F 5 HOH 29 29 29 HOH TIP A . F 5 HOH 30 30 30 HOH TIP A . F 5 HOH 31 31 31 HOH TIP A . F 5 HOH 32 33 33 HOH TIP A . F 5 HOH 33 34 34 HOH TIP A . F 5 HOH 34 35 35 HOH TIP A . F 5 HOH 35 36 36 HOH TIP A . F 5 HOH 36 38 38 HOH TIP A . F 5 HOH 37 39 39 HOH TIP A . F 5 HOH 38 40 40 HOH TIP A . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F 2 1,2 A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 4290 ? 2 MORE -55 ? 2 'SSA (A^2)' 30270 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 12_565 x,x-y+1,-z+1/6 0.5000000000 0.8660254038 0.0000000000 -39.1500000000 0.8660254038 -0.5000000000 0.0000000000 67.8097891163 0.0000000000 0.0000000000 -1.0000000000 48.1833333333 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 191 ? A HIS 282 ? 1_555 NI ? B NI . ? A NI 489 ? 1_555 OD1 ? A ASP 193 ? A ASP 284 ? 1_555 92.0 ? 2 NE2 ? A HIS 191 ? A HIS 282 ? 1_555 NI ? B NI . ? A NI 489 ? 1_555 NE2 ? A HIS 263 ? A HIS 354 ? 1_555 83.0 ? 3 OD1 ? A ASP 193 ? A ASP 284 ? 1_555 NI ? B NI . ? A NI 489 ? 1_555 NE2 ? A HIS 263 ? A HIS 354 ? 1_555 94.0 ? 4 NE2 ? A HIS 191 ? A HIS 282 ? 1_555 NI ? B NI . ? A NI 489 ? 1_555 "O2'" ? E OGA . ? A OGA 5798 ? 1_555 101.3 ? 5 OD1 ? A ASP 193 ? A ASP 284 ? 1_555 NI ? B NI . ? A NI 489 ? 1_555 "O2'" ? E OGA . ? A OGA 5798 ? 1_555 161.7 ? 6 NE2 ? A HIS 263 ? A HIS 354 ? 1_555 NI ? B NI . ? A NI 489 ? 1_555 "O2'" ? E OGA . ? A OGA 5798 ? 1_555 100.2 ? 7 NE2 ? A HIS 191 ? A HIS 282 ? 1_555 NI ? B NI . ? A NI 489 ? 1_555 O2 ? E OGA . ? A OGA 5798 ? 1_555 74.5 ? 8 OD1 ? A ASP 193 ? A ASP 284 ? 1_555 NI ? B NI . ? A NI 489 ? 1_555 O2 ? E OGA . ? A OGA 5798 ? 1_555 80.7 ? 9 NE2 ? A HIS 263 ? A HIS 354 ? 1_555 NI ? B NI . ? A NI 489 ? 1_555 O2 ? E OGA . ? A OGA 5798 ? 1_555 156.5 ? 10 "O2'" ? E OGA . ? A OGA 5798 ? 1_555 NI ? B NI . ? A NI 489 ? 1_555 O2 ? E OGA . ? A OGA 5798 ? 1_555 90.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-12-22 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' pdbx_struct_conn_angle 6 3 'Structure model' struct_conn 7 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.value' 16 3 'Structure model' '_struct_conn.pdbx_dist_value' 17 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 18 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 19 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 20 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 21 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 22 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 23 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 24 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 25 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 26 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 27 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 28 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 29 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 30 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHASER phasing . ? 2 CNS refinement 1.2 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 175 ? ? -52.14 -1.93 2 1 ASP A 232 ? ? -94.77 31.48 3 1 ASP A 276 ? ? 86.59 1.01 4 1 ASP A 361 ? ? -36.00 121.55 5 1 LYS A 389 ? ? 63.00 68.87 6 1 LEU A 393 ? ? -69.18 12.99 7 1 GLU A 478 ? ? -70.19 34.13 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 153 ? CG ? A LYS 62 CG 2 1 Y 1 A LYS 153 ? CD ? A LYS 62 CD 3 1 Y 1 A LYS 153 ? CE ? A LYS 62 CE 4 1 Y 1 A LYS 153 ? NZ ? A LYS 62 NZ 5 1 Y 1 A ARG 184 ? CG ? A ARG 93 CG 6 1 Y 1 A ARG 184 ? CD ? A ARG 93 CD 7 1 Y 1 A ARG 184 ? NE ? A ARG 93 NE 8 1 Y 1 A ARG 184 ? CZ ? A ARG 93 CZ 9 1 Y 1 A ARG 184 ? NH1 ? A ARG 93 NH1 10 1 Y 1 A ARG 184 ? NH2 ? A ARG 93 NH2 11 1 Y 1 A ASN 218 ? CG ? A ASN 127 CG 12 1 Y 1 A ASN 218 ? OD1 ? A ASN 127 OD1 13 1 Y 1 A ASN 218 ? ND2 ? A ASN 127 ND2 14 1 Y 1 A LYS 234 ? CG ? A LYS 143 CG 15 1 Y 1 A LYS 234 ? CD ? A LYS 143 CD 16 1 Y 1 A LYS 234 ? CE ? A LYS 143 CE 17 1 Y 1 A LYS 234 ? NZ ? A LYS 143 NZ 18 1 Y 1 A GLU 240 ? CG ? A GLU 149 CG 19 1 Y 1 A GLU 240 ? CD ? A GLU 149 CD 20 1 Y 1 A GLU 240 ? OE1 ? A GLU 149 OE1 21 1 Y 1 A GLU 240 ? OE2 ? A GLU 149 OE2 22 1 Y 1 A ARG 418 ? CG ? A ARG 327 CG 23 1 Y 1 A ARG 418 ? CD ? A ARG 327 CD 24 1 Y 1 A ARG 418 ? NE ? A ARG 327 NE 25 1 Y 1 A ARG 418 ? CZ ? A ARG 327 CZ 26 1 Y 1 A ARG 418 ? NH1 ? A ARG 327 NH1 27 1 Y 1 A ARG 418 ? NH2 ? A ARG 327 NH2 28 1 Y 1 A LYS 445 ? CG ? A LYS 354 CG 29 1 Y 1 A LYS 445 ? CD ? A LYS 354 CD 30 1 Y 1 A LYS 445 ? CE ? A LYS 354 CE 31 1 Y 1 A LYS 445 ? NZ ? A LYS 354 NZ 32 1 Y 1 A ASP 457 ? CG ? A ASP 366 CG 33 1 Y 1 A ASP 457 ? OD1 ? A ASP 366 OD1 34 1 Y 1 A ASP 457 ? OD2 ? A ASP 366 OD2 35 1 Y 1 A LYS 466 ? CG ? A LYS 375 CG 36 1 Y 1 A LYS 466 ? CD ? A LYS 375 CD 37 1 Y 1 A LYS 466 ? CE ? A LYS 375 CE 38 1 Y 1 A LYS 466 ? NZ ? A LYS 375 NZ 39 1 Y 1 A SER 469 ? OG ? A SER 378 OG 40 1 Y 1 A ARG 473 ? CG ? A ARG 382 CG 41 1 Y 1 A ARG 473 ? CD ? A ARG 382 CD 42 1 Y 1 A ARG 473 ? NE ? A ARG 382 NE 43 1 Y 1 A ARG 473 ? CZ ? A ARG 382 CZ 44 1 Y 1 A ARG 473 ? NH1 ? A ARG 382 NH1 45 1 Y 1 A ARG 473 ? NH2 ? A ARG 382 NH2 46 1 Y 1 A GLU 476 ? CG ? A GLU 385 CG 47 1 Y 1 A GLU 476 ? CD ? A GLU 385 CD 48 1 Y 1 A GLU 476 ? OE1 ? A GLU 385 OE1 49 1 Y 1 A GLU 476 ? OE2 ? A GLU 385 OE2 50 1 Y 1 A GLU 477 ? CG ? A GLU 386 CG 51 1 Y 1 A GLU 477 ? CD ? A GLU 386 CD 52 1 Y 1 A GLU 477 ? OE1 ? A GLU 386 OE1 53 1 Y 1 A GLU 477 ? OE2 ? A GLU 386 OE2 54 1 Y 1 A GLU 478 ? CG ? A GLU 387 CG 55 1 Y 1 A GLU 478 ? CD ? A GLU 387 CD 56 1 Y 1 A GLU 478 ? OE1 ? A GLU 387 OE1 57 1 Y 1 A GLU 478 ? OE2 ? A GLU 387 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 92 ? A SER 1 2 1 Y 1 A LEU 93 ? A LEU 2 3 1 Y 1 A MET 94 ? A MET 3 4 1 Y 1 A LYS 95 ? A LYS 4 5 1 Y 1 A LYS 96 ? A LYS 5 6 1 Y 1 A ARG 97 ? A ARG 6 7 1 Y 1 A ARG 98 ? A ARG 7 8 1 Y 1 A ASN 99 ? A ASN 8 9 1 Y 1 A TRP 100 ? A TRP 9 10 1 Y 1 A HIS 101 ? A HIS 10 11 1 Y 1 A ARG 102 ? A ARG 11 12 1 Y 1 A HIS 103 ? A HIS 12 13 1 Y 1 A ASP 104 ? A ASP 13 14 1 Y 1 A TYR 105 ? A TYR 14 15 1 Y 1 A THR 106 ? A THR 15 16 1 Y 1 A GLU 107 ? A GLU 16 17 1 Y 1 A ILE 108 ? A ILE 17 18 1 Y 1 A ASP 109 ? A ASP 18 19 1 Y 1 A ASP 110 ? A ASP 19 20 1 Y 1 A GLY 111 ? A GLY 20 21 1 Y 1 A SER 112 ? A SER 21 22 1 Y 1 A LYS 113 ? A LYS 22 23 1 Y 1 A GLY 480 ? A GLY 389 24 1 Y 1 A LYS 481 ? A LYS 390 25 1 Y 1 A PRO 482 ? A PRO 391 26 1 Y 1 A VAL 483 ? A VAL 392 27 1 Y 1 A LYS 484 ? A LYS 393 28 1 Y 1 A SER 485 ? A SER 394 29 1 Y 1 A GLN 486 ? A GLN 395 30 1 Y 1 A GLY 487 ? A GLY 396 31 1 Y 1 A ILE 488 ? A ILE 397 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 NI NI NI N N 250 OGA C1 C N N 251 OGA C2 C N N 252 OGA C4 C N N 253 OGA C5 C N N 254 OGA O1 O N N 255 OGA O2 O N N 256 OGA "O2'" O N N 257 OGA O3 O N N 258 OGA N1 N N N 259 OGA O4 O N N 260 OGA H4C1 H N N 261 OGA H4C2 H N N 262 OGA H2 H N N 263 OGA H3 H N N 264 OGA H1 H N N 265 OXY O1 O N N 266 OXY O2 O N N 267 PHE N N N N 268 PHE CA C N S 269 PHE C C N N 270 PHE O O N N 271 PHE CB C N N 272 PHE CG C Y N 273 PHE CD1 C Y N 274 PHE CD2 C Y N 275 PHE CE1 C Y N 276 PHE CE2 C Y N 277 PHE CZ C Y N 278 PHE OXT O N N 279 PHE H H N N 280 PHE H2 H N N 281 PHE HA H N N 282 PHE HB2 H N N 283 PHE HB3 H N N 284 PHE HD1 H N N 285 PHE HD2 H N N 286 PHE HE1 H N N 287 PHE HE2 H N N 288 PHE HZ H N N 289 PHE HXT H N N 290 PRO N N N N 291 PRO CA C N S 292 PRO C C N N 293 PRO O O N N 294 PRO CB C N N 295 PRO CG C N N 296 PRO CD C N N 297 PRO OXT O N N 298 PRO H H N N 299 PRO HA H N N 300 PRO HB2 H N N 301 PRO HB3 H N N 302 PRO HG2 H N N 303 PRO HG3 H N N 304 PRO HD2 H N N 305 PRO HD3 H N N 306 PRO HXT H N N 307 SER N N N N 308 SER CA C N S 309 SER C C N N 310 SER O O N N 311 SER CB C N N 312 SER OG O N N 313 SER OXT O N N 314 SER H H N N 315 SER H2 H N N 316 SER HA H N N 317 SER HB2 H N N 318 SER HB3 H N N 319 SER HG H N N 320 SER HXT H N N 321 THR N N N N 322 THR CA C N S 323 THR C C N N 324 THR O O N N 325 THR CB C N R 326 THR OG1 O N N 327 THR CG2 C N N 328 THR OXT O N N 329 THR H H N N 330 THR H2 H N N 331 THR HA H N N 332 THR HB H N N 333 THR HG1 H N N 334 THR HG21 H N N 335 THR HG22 H N N 336 THR HG23 H N N 337 THR HXT H N N 338 TRP N N N N 339 TRP CA C N S 340 TRP C C N N 341 TRP O O N N 342 TRP CB C N N 343 TRP CG C Y N 344 TRP CD1 C Y N 345 TRP CD2 C Y N 346 TRP NE1 N Y N 347 TRP CE2 C Y N 348 TRP CE3 C Y N 349 TRP CZ2 C Y N 350 TRP CZ3 C Y N 351 TRP CH2 C Y N 352 TRP OXT O N N 353 TRP H H N N 354 TRP H2 H N N 355 TRP HA H N N 356 TRP HB2 H N N 357 TRP HB3 H N N 358 TRP HD1 H N N 359 TRP HE1 H N N 360 TRP HE3 H N N 361 TRP HZ2 H N N 362 TRP HZ3 H N N 363 TRP HH2 H N N 364 TRP HXT H N N 365 TYR N N N N 366 TYR CA C N S 367 TYR C C N N 368 TYR O O N N 369 TYR CB C N N 370 TYR CG C Y N 371 TYR CD1 C Y N 372 TYR CD2 C Y N 373 TYR CE1 C Y N 374 TYR CE2 C Y N 375 TYR CZ C Y N 376 TYR OH O N N 377 TYR OXT O N N 378 TYR H H N N 379 TYR H2 H N N 380 TYR HA H N N 381 TYR HB2 H N N 382 TYR HB3 H N N 383 TYR HD1 H N N 384 TYR HD2 H N N 385 TYR HE1 H N N 386 TYR HE2 H N N 387 TYR HH H N N 388 TYR HXT H N N 389 VAL N N N N 390 VAL CA C N S 391 VAL C C N N 392 VAL O O N N 393 VAL CB C N N 394 VAL CG1 C N N 395 VAL CG2 C N N 396 VAL OXT O N N 397 VAL H H N N 398 VAL H2 H N N 399 VAL HA H N N 400 VAL HB H N N 401 VAL HG11 H N N 402 VAL HG12 H N N 403 VAL HG13 H N N 404 VAL HG21 H N N 405 VAL HG22 H N N 406 VAL HG23 H N N 407 VAL HXT H N N 408 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 OGA C1 C2 sing N N 237 OGA C1 O1 doub N N 238 OGA C1 O2 sing N N 239 OGA C2 "O2'" doub N N 240 OGA C2 N1 sing N N 241 OGA C4 C5 sing N N 242 OGA C4 N1 sing N N 243 OGA C4 H4C1 sing N N 244 OGA C4 H4C2 sing N N 245 OGA C5 O3 sing N N 246 OGA C5 O4 doub N N 247 OGA O2 H2 sing N N 248 OGA O3 H3 sing N N 249 OGA N1 H1 sing N N 250 OXY O1 O2 doub N N 251 PHE N CA sing N N 252 PHE N H sing N N 253 PHE N H2 sing N N 254 PHE CA C sing N N 255 PHE CA CB sing N N 256 PHE CA HA sing N N 257 PHE C O doub N N 258 PHE C OXT sing N N 259 PHE CB CG sing N N 260 PHE CB HB2 sing N N 261 PHE CB HB3 sing N N 262 PHE CG CD1 doub Y N 263 PHE CG CD2 sing Y N 264 PHE CD1 CE1 sing Y N 265 PHE CD1 HD1 sing N N 266 PHE CD2 CE2 doub Y N 267 PHE CD2 HD2 sing N N 268 PHE CE1 CZ doub Y N 269 PHE CE1 HE1 sing N N 270 PHE CE2 CZ sing Y N 271 PHE CE2 HE2 sing N N 272 PHE CZ HZ sing N N 273 PHE OXT HXT sing N N 274 PRO N CA sing N N 275 PRO N CD sing N N 276 PRO N H sing N N 277 PRO CA C sing N N 278 PRO CA CB sing N N 279 PRO CA HA sing N N 280 PRO C O doub N N 281 PRO C OXT sing N N 282 PRO CB CG sing N N 283 PRO CB HB2 sing N N 284 PRO CB HB3 sing N N 285 PRO CG CD sing N N 286 PRO CG HG2 sing N N 287 PRO CG HG3 sing N N 288 PRO CD HD2 sing N N 289 PRO CD HD3 sing N N 290 PRO OXT HXT sing N N 291 SER N CA sing N N 292 SER N H sing N N 293 SER N H2 sing N N 294 SER CA C sing N N 295 SER CA CB sing N N 296 SER CA HA sing N N 297 SER C O doub N N 298 SER C OXT sing N N 299 SER CB OG sing N N 300 SER CB HB2 sing N N 301 SER CB HB3 sing N N 302 SER OG HG sing N N 303 SER OXT HXT sing N N 304 THR N CA sing N N 305 THR N H sing N N 306 THR N H2 sing N N 307 THR CA C sing N N 308 THR CA CB sing N N 309 THR CA HA sing N N 310 THR C O doub N N 311 THR C OXT sing N N 312 THR CB OG1 sing N N 313 THR CB CG2 sing N N 314 THR CB HB sing N N 315 THR OG1 HG1 sing N N 316 THR CG2 HG21 sing N N 317 THR CG2 HG22 sing N N 318 THR CG2 HG23 sing N N 319 THR OXT HXT sing N N 320 TRP N CA sing N N 321 TRP N H sing N N 322 TRP N H2 sing N N 323 TRP CA C sing N N 324 TRP CA CB sing N N 325 TRP CA HA sing N N 326 TRP C O doub N N 327 TRP C OXT sing N N 328 TRP CB CG sing N N 329 TRP CB HB2 sing N N 330 TRP CB HB3 sing N N 331 TRP CG CD1 doub Y N 332 TRP CG CD2 sing Y N 333 TRP CD1 NE1 sing Y N 334 TRP CD1 HD1 sing N N 335 TRP CD2 CE2 doub Y N 336 TRP CD2 CE3 sing Y N 337 TRP NE1 CE2 sing Y N 338 TRP NE1 HE1 sing N N 339 TRP CE2 CZ2 sing Y N 340 TRP CE3 CZ3 doub Y N 341 TRP CE3 HE3 sing N N 342 TRP CZ2 CH2 doub Y N 343 TRP CZ2 HZ2 sing N N 344 TRP CZ3 CH2 sing Y N 345 TRP CZ3 HZ3 sing N N 346 TRP CH2 HH2 sing N N 347 TRP OXT HXT sing N N 348 TYR N CA sing N N 349 TYR N H sing N N 350 TYR N H2 sing N N 351 TYR CA C sing N N 352 TYR CA CB sing N N 353 TYR CA HA sing N N 354 TYR C O doub N N 355 TYR C OXT sing N N 356 TYR CB CG sing N N 357 TYR CB HB2 sing N N 358 TYR CB HB3 sing N N 359 TYR CG CD1 doub Y N 360 TYR CG CD2 sing Y N 361 TYR CD1 CE1 sing Y N 362 TYR CD1 HD1 sing N N 363 TYR CD2 CE2 doub Y N 364 TYR CD2 HD2 sing N N 365 TYR CE1 CZ doub Y N 366 TYR CE1 HE1 sing N N 367 TYR CE2 CZ sing Y N 368 TYR CE2 HE2 sing N N 369 TYR CZ OH sing N N 370 TYR OH HH sing N N 371 TYR OXT HXT sing N N 372 VAL N CA sing N N 373 VAL N H sing N N 374 VAL N H2 sing N N 375 VAL CA C sing N N 376 VAL CA CB sing N N 377 VAL CA HA sing N N 378 VAL C O doub N N 379 VAL C OXT sing N N 380 VAL CB CG1 sing N N 381 VAL CB CG2 sing N N 382 VAL CB HB sing N N 383 VAL CG1 HG11 sing N N 384 VAL CG1 HG12 sing N N 385 VAL CG1 HG13 sing N N 386 VAL CG2 HG21 sing N N 387 VAL CG2 HG22 sing N N 388 VAL CG2 HG23 sing N N 389 VAL OXT HXT sing N N 390 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'NICKEL (II) ION' NI 3 'OXYGEN MOLECULE' OXY 4 N-OXALYLGLYCINE OGA 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3KV6 _pdbx_initial_refinement_model.details 'PDB entry 3KV6' #