HEADER OXIDOREDUCTASE 30-NOV-09 3KVE TITLE STRUCTURE OF NATIVE L-AMINO ACID OXIDASE FROM VIPERA AMMODYTES TITLE 2 AMMODYTES: STABILIZATION OF THE QUATERNARY STRUCTURE BY DIVALENT IONS TITLE 3 AND STRUCTURAL CHANGES IN THE DYNAMIC ACTIVE SITE CAVEAT 3KVE NAG A 488 HAS WRONG CHIRALITY AT ATOM C1 NAG B 488 HAS WRONG CAVEAT 2 3KVE CHIRALITY AT ATOM C1 NAG C 488 HAS WRONG CHIRALITY AT ATOM CAVEAT 3 3KVE C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: L-AMINO ACID OXIDASE; COMPND 3 CHAIN: A, B, C, D SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIPERA AMMODYTES AMMODYTES; SOURCE 3 ORGANISM_TAXID: 8705 KEYWDS LAAO, SNAKE VENOM, VIPERA AMMODYTES AMMODYTES, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR D.GERGIOVA,M.T.MURAKAMI,M.PERBANDT,R.K.ARNI,C.BETZEL REVDAT 3 06-SEP-23 3KVE 1 HETSYN REVDAT 2 29-JUL-20 3KVE 1 CAVEAT COMPND REMARK HETNAM REVDAT 2 2 1 LINK SITE REVDAT 1 13-OCT-10 3KVE 0 JRNL AUTH D.GERGIOVA,M.T.MURAKAMI,M.PERBANDT,R.K.ARNI,C.BETZEL JRNL TITL STRUCTURE OF NATIVE L-AMINO ACID OXIDASE FROM VIPERA JRNL TITL 2 AMMODYTES AMMODYTES: STABILIZATION OF THE QUATERNARY JRNL TITL 3 STRUCTURE BY DIVALENT IONS AND STRUCTURAL CHANGES IN THE JRNL TITL 4 DYNAMIC ACTIVE SITE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.57 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.57 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 60346 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3212 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.57 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.63 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3624 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 80.27 REMARK 3 BIN R VALUE (WORKING SET) : 0.2380 REMARK 3 BIN FREE R VALUE SET COUNT : 197 REMARK 3 BIN FREE R VALUE : 0.3610 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 15456 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 272 REMARK 3 SOLVENT ATOMS : 554 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.00000 REMARK 3 B22 (A**2) : -0.74000 REMARK 3 B33 (A**2) : -0.25000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.11000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.377 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.258 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 22.231 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.928 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.851 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 16119 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 21831 ; 1.523 ; 1.970 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1934 ; 7.474 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 777 ;38.410 ;23.874 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2730 ;20.380 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 108 ;20.408 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 2309 ; 0.111 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 12300 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 8897 ; 0.227 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 10951 ; 0.319 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 1029 ; 0.190 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 3 ; 0.164 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 38 ; 0.173 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.138 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 9795 ; 0.573 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 15510 ; 1.018 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 7293 ; 1.467 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 6320 ; 2.395 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 4 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 486 REMARK 3 RESIDUE RANGE : B 3 B 486 REMARK 3 RESIDUE RANGE : C 3 C 486 REMARK 3 RESIDUE RANGE : D 3 D 486 REMARK 3 ORIGIN FOR THE GROUP (A): 46.5768 -16.0397 27.1996 REMARK 3 T TENSOR REMARK 3 T11: 0.0020 T22: -0.0348 REMARK 3 T33: -0.0218 T12: 0.0028 REMARK 3 T13: -0.0006 T23: -0.0010 REMARK 3 L TENSOR REMARK 3 L11: 0.1216 L22: 0.0676 REMARK 3 L33: 0.0855 L12: 0.0055 REMARK 3 L13: -0.0027 L23: -0.0091 REMARK 3 S TENSOR REMARK 3 S11: -0.0038 S12: -0.0024 S13: -0.0042 REMARK 3 S21: -0.0043 S22: 0.0034 S23: -0.0037 REMARK 3 S31: 0.0013 S32: 0.0023 S33: 0.0004 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3KVE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-JAN-10. REMARK 100 THE DEPOSITION ID IS D_1000056495. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUL-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X13 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8 REMARK 200 MONOCHROMATOR : SI REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62717 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.570 REMARK 200 RESOLUTION RANGE LOW (A) : 27.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.17200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.57 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 74.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.44800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1F8R REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 98.48900 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.91950 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 98.48900 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 47.91950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 18130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 67790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -172.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 495 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 ASN A 2 REMARK 465 ALA B 1 REMARK 465 ASN B 2 REMARK 465 ALA C 1 REMARK 465 ASN C 2 REMARK 465 ALA D 1 REMARK 465 ASN D 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG C 440 OD1 ASP D 201 2.04 REMARK 500 CZ ARG C 440 OD1 ASP D 201 2.08 REMARK 500 OD1 ASP A 201 NH2 ARG B 440 2.10 REMARK 500 OD1 ASP A 201 CZ ARG B 440 2.12 REMARK 500 NZ LYS D 124 O LEU D 140 2.15 REMARK 500 OD1 ASP A 201 NH1 ARG B 440 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 440 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 ARG B 440 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 LYS D 280 N - CA - C ANGL. DEV. = 19.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 4 130.89 58.65 REMARK 500 ALA A 41 42.45 -101.62 REMARK 500 ASP A 136 89.30 -153.08 REMARK 500 THR A 171 -125.36 -129.50 REMARK 500 ILE A 226 -61.93 -91.39 REMARK 500 ASN A 267 -162.99 -121.50 REMARK 500 GLU A 279 42.36 88.38 REMARK 500 LYS A 280 82.11 118.89 REMARK 500 THR A 282 134.47 -34.91 REMARK 500 ARG A 353 -57.90 59.37 REMARK 500 LYS A 385 151.89 -48.48 REMARK 500 ALA A 429 -72.30 -81.19 REMARK 500 TYR A 436 -17.91 78.47 REMARK 500 ARG B 4 97.19 59.32 REMARK 500 ASN B 32 76.41 -114.29 REMARK 500 MET B 89 -29.66 -140.19 REMARK 500 SER B 147 -2.01 -57.79 REMARK 500 LYS B 169 -166.72 -62.77 REMARK 500 ARG B 170 -45.91 63.57 REMARK 500 THR B 171 -139.29 -133.34 REMARK 500 ASN B 194 33.82 76.79 REMARK 500 SER B 216 126.62 -35.42 REMARK 500 GLU B 279 44.97 81.30 REMARK 500 LYS B 280 90.78 118.44 REMARK 500 LYS B 334 55.84 -64.26 REMARK 500 ARG B 353 -64.09 56.22 REMARK 500 GLN B 402 58.24 38.14 REMARK 500 PRO B 414 98.34 -67.35 REMARK 500 MET B 416 144.58 -179.72 REMARK 500 TYR B 436 -14.27 85.69 REMARK 500 GLN B 449 93.77 -167.71 REMARK 500 ARG C 4 113.54 64.89 REMARK 500 GLU C 115 123.60 -172.96 REMARK 500 THR C 171 -131.68 -144.90 REMARK 500 GLU C 192 -65.15 -104.83 REMARK 500 ASN C 258 26.64 49.56 REMARK 500 GLN C 270 140.73 -170.10 REMARK 500 GLU C 279 52.00 85.19 REMARK 500 LYS C 280 85.00 122.98 REMARK 500 ARG C 353 -60.58 63.80 REMARK 500 GLN C 402 48.56 36.89 REMARK 500 MET C 416 136.89 178.48 REMARK 500 MET C 427 -6.49 74.99 REMARK 500 TYR C 436 -19.83 78.09 REMARK 500 GLN C 449 90.46 -170.97 REMARK 500 GLU C 485 -123.33 -108.47 REMARK 500 ARG D 4 125.13 60.03 REMARK 500 GLU D 9 -43.85 -27.65 REMARK 500 ALA D 41 38.88 -99.11 REMARK 500 PRO D 88 139.50 -37.78 REMARK 500 REMARK 500 THIS ENTRY HAS 59 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 279 LYS A 280 -44.27 REMARK 500 GLN A 449 GLY A 450 -50.59 REMARK 500 GLU B 279 LYS B 280 -50.76 REMARK 500 GLN B 449 GLY B 450 -48.47 REMARK 500 PRO C 278 GLU C 279 145.22 REMARK 500 GLU C 279 LYS C 280 -51.02 REMARK 500 GLN C 449 GLY C 450 -40.64 REMARK 500 GLU D 279 LYS D 280 61.94 REMARK 500 GLN D 449 GLY D 450 -36.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 489 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 75 ND1 REMARK 620 2 GLU D 279 OE2 83.6 REMARK 620 3 GLU D 279 OE1 90.2 51.5 REMARK 620 4 HOH D 490 O 115.8 129.3 80.5 REMARK 620 5 HOH D 491 O 117.3 103.7 142.4 106.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 489 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 279 OE2 REMARK 620 2 GLU A 279 OE1 53.4 REMARK 620 3 HOH A 493 O 127.8 90.6 REMARK 620 4 HIS D 75 ND1 102.3 96.0 119.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 489 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 75 ND1 REMARK 620 2 GLU C 279 OE2 95.2 REMARK 620 3 HOH C 490 O 116.0 123.6 REMARK 620 4 HOH C 491 O 117.2 94.7 108.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 489 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 279 OE2 REMARK 620 2 HIS C 75 ND1 103.7 REMARK 620 3 HOH C 492 O 129.3 111.0 REMARK 620 N 1 2 DBREF 3KVE A 1 486 PDB 3KVE 3KVE 1 486 DBREF 3KVE B 1 486 PDB 3KVE 3KVE 1 486 DBREF 3KVE C 1 486 PDB 3KVE 3KVE 1 486 DBREF 3KVE D 1 486 PDB 3KVE 3KVE 1 486 SEQRES 1 A 486 ALA ASN ASP ARG ASN PRO LEU GLU GLU CYS PHE ARG GLU SEQRES 2 A 486 THR ASP TYR GLU GLU PHE LEU GLU ILE ALA ARG ASN GLY SEQRES 3 A 486 LEU LYS LYS THR SER ASN PRO LYS HIS VAL VAL VAL VAL SEQRES 4 A 486 GLY ALA GLY MET SER GLY LEU SER ALA ALA TYR VAL LEU SEQRES 5 A 486 ALA GLY ALA GLY HIS LYS VAL THR VAL LEU GLU ALA SER SEQRES 6 A 486 GLU ARG ALA GLY GLY ARG VAL ARG THR HIS ARG ASN SER SEQRES 7 A 486 LYS GLU GLY TRP TYR ALA ASN LEU GLY PRO MET ARG ILE SEQRES 8 A 486 PRO GLU LYS HIS ARG ILE VAL ARG GLU TYR ILE ARG LYS SEQRES 9 A 486 PHE GLY LEU ASN LEU ASN GLU PHE SER GLN GLU ASN ASP SEQRES 10 A 486 ASN ALA TRP TYR PHE ILE LYS ASN ILE ARG LYS ARG VAL SEQRES 11 A 486 GLY GLU VAL ASN LYS ASP PRO GLY LEU LEU LYS TYR PRO SEQRES 12 A 486 VAL LYS PRO SER GLU GLU GLY LYS SER ALA GLY GLN LEU SEQRES 13 A 486 TYR GLU GLU SER LEU GLY SER ALA VAL LYS ASP LEU LYS SEQRES 14 A 486 ARG THR ASN CYS SER TYR ILE LEU ASN LYS TYR ASP THR SEQRES 15 A 486 TYR SER THR LYS GLU TYR LEU ILE LYS GLU GLY ASN LEU SEQRES 16 A 486 SER PRO GLY ALA VAL ASP MET ILE GLY ASP LEU LEU ASN SEQRES 17 A 486 GLU ASP SER GLY TYR TYR VAL SER PHE ILE GLU SER LEU SEQRES 18 A 486 LYS HIS ASP ASP ILE PHE ALA TYR GLU LYS ARG PHE ASP SEQRES 19 A 486 GLU ILE VAL GLY GLY MET ASP GLN LEU PRO THR SER MET SEQRES 20 A 486 TYR ARG ALA ILE GLU GLU LYS VAL LYS PHE ASN ALA ARG SEQRES 21 A 486 VAL ILE LYS ILE GLN GLN ASN ALA ASN GLN VAL THR VAL SEQRES 22 A 486 THR TYR GLN THR PRO GLU LYS ASP THR SER SER ASN THR SEQRES 23 A 486 ALA ASP TYR VAL ILE VAL CYS THR THR SER ARG ALA ALA SEQRES 24 A 486 ARG ARG ILE GLN PHE GLU PRO PRO LEU PRO PRO LYS LYS SEQRES 25 A 486 GLN HIS ALA LEU ARG SER VAL HIS TYR ARG SER GLY THR SEQRES 26 A 486 LYS ILE PHE LEU THR CYS SER SER LYS PHE TRP GLU ASP SEQRES 27 A 486 ASP GLY ILE HIS GLY GLY LYS SER THR THR ASP LEU PRO SEQRES 28 A 486 SER ARG PHE ILE TYR TYR PRO ASN HIS ASN PHE SER THR SEQRES 29 A 486 GLY VAL GLY VAL ILE ILE ALA TYR GLY ILE GLY ASP ASP SEQRES 30 A 486 ALA ASN PHE PHE GLN ALA LEU LYS PHE LYS ASP CYS ALA SEQRES 31 A 486 ASP ILE VAL PHE ASN ASP LEU SER LEU ILE HIS GLN LEU SEQRES 32 A 486 PRO LYS GLU GLU ILE GLN SER PHE CYS TYR PRO SER MET SEQRES 33 A 486 ILE GLN LYS TRP SER LEU ASP LYS TYR ALA MET GLY ALA SEQRES 34 A 486 ILE THR THR PHE THR PRO TYR GLN PHE GLN ARG PHE SER SEQRES 35 A 486 GLU ALA LEU THR ALA PRO GLN GLY ARG ILE PHE PHE ALA SEQRES 36 A 486 GLY GLU TYR THR ALA GLU ALA HIS GLY TRP ILE ASP SER SEQRES 37 A 486 THR ILE LYS SER GLY LEU THR ALA ALA ARG ASP VAL ASN SEQRES 38 A 486 ARG ALA SER GLU GLN SEQRES 1 B 486 ALA ASN ASP ARG ASN PRO LEU GLU GLU CYS PHE ARG GLU SEQRES 2 B 486 THR ASP TYR GLU GLU PHE LEU GLU ILE ALA ARG ASN GLY SEQRES 3 B 486 LEU LYS LYS THR SER ASN PRO LYS HIS VAL VAL VAL VAL SEQRES 4 B 486 GLY ALA GLY MET SER GLY LEU SER ALA ALA TYR VAL LEU SEQRES 5 B 486 ALA GLY ALA GLY HIS LYS VAL THR VAL LEU GLU ALA SER SEQRES 6 B 486 GLU ARG ALA GLY GLY ARG VAL ARG THR HIS ARG ASN SER SEQRES 7 B 486 LYS GLU GLY TRP TYR ALA ASN LEU GLY PRO MET ARG ILE SEQRES 8 B 486 PRO GLU LYS HIS ARG ILE VAL ARG GLU TYR ILE ARG LYS SEQRES 9 B 486 PHE GLY LEU ASN LEU ASN GLU PHE SER GLN GLU ASN ASP SEQRES 10 B 486 ASN ALA TRP TYR PHE ILE LYS ASN ILE ARG LYS ARG VAL SEQRES 11 B 486 GLY GLU VAL ASN LYS ASP PRO GLY LEU LEU LYS TYR PRO SEQRES 12 B 486 VAL LYS PRO SER GLU GLU GLY LYS SER ALA GLY GLN LEU SEQRES 13 B 486 TYR GLU GLU SER LEU GLY SER ALA VAL LYS ASP LEU LYS SEQRES 14 B 486 ARG THR ASN CYS SER TYR ILE LEU ASN LYS TYR ASP THR SEQRES 15 B 486 TYR SER THR LYS GLU TYR LEU ILE LYS GLU GLY ASN LEU SEQRES 16 B 486 SER PRO GLY ALA VAL ASP MET ILE GLY ASP LEU LEU ASN SEQRES 17 B 486 GLU ASP SER GLY TYR TYR VAL SER PHE ILE GLU SER LEU SEQRES 18 B 486 LYS HIS ASP ASP ILE PHE ALA TYR GLU LYS ARG PHE ASP SEQRES 19 B 486 GLU ILE VAL GLY GLY MET ASP GLN LEU PRO THR SER MET SEQRES 20 B 486 TYR ARG ALA ILE GLU GLU LYS VAL LYS PHE ASN ALA ARG SEQRES 21 B 486 VAL ILE LYS ILE GLN GLN ASN ALA ASN GLN VAL THR VAL SEQRES 22 B 486 THR TYR GLN THR PRO GLU LYS ASP THR SER SER ASN THR SEQRES 23 B 486 ALA ASP TYR VAL ILE VAL CYS THR THR SER ARG ALA ALA SEQRES 24 B 486 ARG ARG ILE GLN PHE GLU PRO PRO LEU PRO PRO LYS LYS SEQRES 25 B 486 GLN HIS ALA LEU ARG SER VAL HIS TYR ARG SER GLY THR SEQRES 26 B 486 LYS ILE PHE LEU THR CYS SER SER LYS PHE TRP GLU ASP SEQRES 27 B 486 ASP GLY ILE HIS GLY GLY LYS SER THR THR ASP LEU PRO SEQRES 28 B 486 SER ARG PHE ILE TYR TYR PRO ASN HIS ASN PHE SER THR SEQRES 29 B 486 GLY VAL GLY VAL ILE ILE ALA TYR GLY ILE GLY ASP ASP SEQRES 30 B 486 ALA ASN PHE PHE GLN ALA LEU LYS PHE LYS ASP CYS ALA SEQRES 31 B 486 ASP ILE VAL PHE ASN ASP LEU SER LEU ILE HIS GLN LEU SEQRES 32 B 486 PRO LYS GLU GLU ILE GLN SER PHE CYS TYR PRO SER MET SEQRES 33 B 486 ILE GLN LYS TRP SER LEU ASP LYS TYR ALA MET GLY ALA SEQRES 34 B 486 ILE THR THR PHE THR PRO TYR GLN PHE GLN ARG PHE SER SEQRES 35 B 486 GLU ALA LEU THR ALA PRO GLN GLY ARG ILE PHE PHE ALA SEQRES 36 B 486 GLY GLU TYR THR ALA GLU ALA HIS GLY TRP ILE ASP SER SEQRES 37 B 486 THR ILE LYS SER GLY LEU THR ALA ALA ARG ASP VAL ASN SEQRES 38 B 486 ARG ALA SER GLU GLN SEQRES 1 C 486 ALA ASN ASP ARG ASN PRO LEU GLU GLU CYS PHE ARG GLU SEQRES 2 C 486 THR ASP TYR GLU GLU PHE LEU GLU ILE ALA ARG ASN GLY SEQRES 3 C 486 LEU LYS LYS THR SER ASN PRO LYS HIS VAL VAL VAL VAL SEQRES 4 C 486 GLY ALA GLY MET SER GLY LEU SER ALA ALA TYR VAL LEU SEQRES 5 C 486 ALA GLY ALA GLY HIS LYS VAL THR VAL LEU GLU ALA SER SEQRES 6 C 486 GLU ARG ALA GLY GLY ARG VAL ARG THR HIS ARG ASN SER SEQRES 7 C 486 LYS GLU GLY TRP TYR ALA ASN LEU GLY PRO MET ARG ILE SEQRES 8 C 486 PRO GLU LYS HIS ARG ILE VAL ARG GLU TYR ILE ARG LYS SEQRES 9 C 486 PHE GLY LEU ASN LEU ASN GLU PHE SER GLN GLU ASN ASP SEQRES 10 C 486 ASN ALA TRP TYR PHE ILE LYS ASN ILE ARG LYS ARG VAL SEQRES 11 C 486 GLY GLU VAL ASN LYS ASP PRO GLY LEU LEU LYS TYR PRO SEQRES 12 C 486 VAL LYS PRO SER GLU GLU GLY LYS SER ALA GLY GLN LEU SEQRES 13 C 486 TYR GLU GLU SER LEU GLY SER ALA VAL LYS ASP LEU LYS SEQRES 14 C 486 ARG THR ASN CYS SER TYR ILE LEU ASN LYS TYR ASP THR SEQRES 15 C 486 TYR SER THR LYS GLU TYR LEU ILE LYS GLU GLY ASN LEU SEQRES 16 C 486 SER PRO GLY ALA VAL ASP MET ILE GLY ASP LEU LEU ASN SEQRES 17 C 486 GLU ASP SER GLY TYR TYR VAL SER PHE ILE GLU SER LEU SEQRES 18 C 486 LYS HIS ASP ASP ILE PHE ALA TYR GLU LYS ARG PHE ASP SEQRES 19 C 486 GLU ILE VAL GLY GLY MET ASP GLN LEU PRO THR SER MET SEQRES 20 C 486 TYR ARG ALA ILE GLU GLU LYS VAL LYS PHE ASN ALA ARG SEQRES 21 C 486 VAL ILE LYS ILE GLN GLN ASN ALA ASN GLN VAL THR VAL SEQRES 22 C 486 THR TYR GLN THR PRO GLU LYS ASP THR SER SER ASN THR SEQRES 23 C 486 ALA ASP TYR VAL ILE VAL CYS THR THR SER ARG ALA ALA SEQRES 24 C 486 ARG ARG ILE GLN PHE GLU PRO PRO LEU PRO PRO LYS LYS SEQRES 25 C 486 GLN HIS ALA LEU ARG SER VAL HIS TYR ARG SER GLY THR SEQRES 26 C 486 LYS ILE PHE LEU THR CYS SER SER LYS PHE TRP GLU ASP SEQRES 27 C 486 ASP GLY ILE HIS GLY GLY LYS SER THR THR ASP LEU PRO SEQRES 28 C 486 SER ARG PHE ILE TYR TYR PRO ASN HIS ASN PHE SER THR SEQRES 29 C 486 GLY VAL GLY VAL ILE ILE ALA TYR GLY ILE GLY ASP ASP SEQRES 30 C 486 ALA ASN PHE PHE GLN ALA LEU LYS PHE LYS ASP CYS ALA SEQRES 31 C 486 ASP ILE VAL PHE ASN ASP LEU SER LEU ILE HIS GLN LEU SEQRES 32 C 486 PRO LYS GLU GLU ILE GLN SER PHE CYS TYR PRO SER MET SEQRES 33 C 486 ILE GLN LYS TRP SER LEU ASP LYS TYR ALA MET GLY ALA SEQRES 34 C 486 ILE THR THR PHE THR PRO TYR GLN PHE GLN ARG PHE SER SEQRES 35 C 486 GLU ALA LEU THR ALA PRO GLN GLY ARG ILE PHE PHE ALA SEQRES 36 C 486 GLY GLU TYR THR ALA GLU ALA HIS GLY TRP ILE ASP SER SEQRES 37 C 486 THR ILE LYS SER GLY LEU THR ALA ALA ARG ASP VAL ASN SEQRES 38 C 486 ARG ALA SER GLU GLN SEQRES 1 D 486 ALA ASN ASP ARG ASN PRO LEU GLU GLU CYS PHE ARG GLU SEQRES 2 D 486 THR ASP TYR GLU GLU PHE LEU GLU ILE ALA ARG ASN GLY SEQRES 3 D 486 LEU LYS LYS THR SER ASN PRO LYS HIS VAL VAL VAL VAL SEQRES 4 D 486 GLY ALA GLY MET SER GLY LEU SER ALA ALA TYR VAL LEU SEQRES 5 D 486 ALA GLY ALA GLY HIS LYS VAL THR VAL LEU GLU ALA SER SEQRES 6 D 486 GLU ARG ALA GLY GLY ARG VAL ARG THR HIS ARG ASN SER SEQRES 7 D 486 LYS GLU GLY TRP TYR ALA ASN LEU GLY PRO MET ARG ILE SEQRES 8 D 486 PRO GLU LYS HIS ARG ILE VAL ARG GLU TYR ILE ARG LYS SEQRES 9 D 486 PHE GLY LEU ASN LEU ASN GLU PHE SER GLN GLU ASN ASP SEQRES 10 D 486 ASN ALA TRP TYR PHE ILE LYS ASN ILE ARG LYS ARG VAL SEQRES 11 D 486 GLY GLU VAL ASN LYS ASP PRO GLY LEU LEU LYS TYR PRO SEQRES 12 D 486 VAL LYS PRO SER GLU GLU GLY LYS SER ALA GLY GLN LEU SEQRES 13 D 486 TYR GLU GLU SER LEU GLY SER ALA VAL LYS ASP LEU LYS SEQRES 14 D 486 ARG THR ASN CYS SER TYR ILE LEU ASN LYS TYR ASP THR SEQRES 15 D 486 TYR SER THR LYS GLU TYR LEU ILE LYS GLU GLY ASN LEU SEQRES 16 D 486 SER PRO GLY ALA VAL ASP MET ILE GLY ASP LEU LEU ASN SEQRES 17 D 486 GLU ASP SER GLY TYR TYR VAL SER PHE ILE GLU SER LEU SEQRES 18 D 486 LYS HIS ASP ASP ILE PHE ALA TYR GLU LYS ARG PHE ASP SEQRES 19 D 486 GLU ILE VAL GLY GLY MET ASP GLN LEU PRO THR SER MET SEQRES 20 D 486 TYR ARG ALA ILE GLU GLU LYS VAL LYS PHE ASN ALA ARG SEQRES 21 D 486 VAL ILE LYS ILE GLN GLN ASN ALA ASN GLN VAL THR VAL SEQRES 22 D 486 THR TYR GLN THR PRO GLU LYS ASP THR SER SER ASN THR SEQRES 23 D 486 ALA ASP TYR VAL ILE VAL CYS THR THR SER ARG ALA ALA SEQRES 24 D 486 ARG ARG ILE GLN PHE GLU PRO PRO LEU PRO PRO LYS LYS SEQRES 25 D 486 GLN HIS ALA LEU ARG SER VAL HIS TYR ARG SER GLY THR SEQRES 26 D 486 LYS ILE PHE LEU THR CYS SER SER LYS PHE TRP GLU ASP SEQRES 27 D 486 ASP GLY ILE HIS GLY GLY LYS SER THR THR ASP LEU PRO SEQRES 28 D 486 SER ARG PHE ILE TYR TYR PRO ASN HIS ASN PHE SER THR SEQRES 29 D 486 GLY VAL GLY VAL ILE ILE ALA TYR GLY ILE GLY ASP ASP SEQRES 30 D 486 ALA ASN PHE PHE GLN ALA LEU LYS PHE LYS ASP CYS ALA SEQRES 31 D 486 ASP ILE VAL PHE ASN ASP LEU SER LEU ILE HIS GLN LEU SEQRES 32 D 486 PRO LYS GLU GLU ILE GLN SER PHE CYS TYR PRO SER MET SEQRES 33 D 486 ILE GLN LYS TRP SER LEU ASP LYS TYR ALA MET GLY ALA SEQRES 34 D 486 ILE THR THR PHE THR PRO TYR GLN PHE GLN ARG PHE SER SEQRES 35 D 486 GLU ALA LEU THR ALA PRO GLN GLY ARG ILE PHE PHE ALA SEQRES 36 D 486 GLY GLU TYR THR ALA GLU ALA HIS GLY TRP ILE ASP SER SEQRES 37 D 486 THR ILE LYS SER GLY LEU THR ALA ALA ARG ASP VAL ASN SEQRES 38 D 486 ARG ALA SER GLU GLN MODRES 3KVE ASN C 172 ASN GLYCOSYLATION SITE MODRES 3KVE ASN B 172 ASN GLYCOSYLATION SITE MODRES 3KVE ASN A 172 ASN GLYCOSYLATION SITE MODRES 3KVE ASN D 172 ASN GLYCOSYLATION SITE HET FAD A 487 53 HET NAG A 488 14 HET ZN A 489 1 HET FAD B 487 53 HET NAG B 488 14 HET ZN B 489 1 HET FAD C 487 53 HET NAG C 488 14 HET ZN C 489 1 HET FAD D 487 53 HET NAG D 488 14 HET ZN D 489 1 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM ZN ZINC ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 5 FAD 4(C27 H33 N9 O15 P2) FORMUL 6 NAG 4(C8 H15 N O6) FORMUL 7 ZN 4(ZN 2+) FORMUL 17 HOH *554(H2 O) HELIX 1 1 LEU A 7 ARG A 12 1 6 HELIX 2 2 ASP A 15 GLY A 26 1 12 HELIX 3 3 GLY A 42 ALA A 55 1 14 HELIX 4 4 HIS A 95 PHE A 105 1 11 HELIX 5 5 VAL A 130 ASP A 136 1 7 HELIX 6 6 PRO A 137 LYS A 141 5 5 HELIX 7 7 LYS A 145 GLU A 149 5 5 HELIX 8 8 SER A 152 LEU A 161 1 10 HELIX 9 9 LEU A 161 LYS A 169 1 9 HELIX 10 10 ASN A 172 TYR A 180 1 9 HELIX 11 11 ASP A 181 TYR A 183 5 3 HELIX 12 12 SER A 184 GLU A 192 1 9 HELIX 13 13 SER A 196 LEU A 207 1 12 HELIX 14 14 GLU A 209 TYR A 213 5 5 HELIX 15 15 SER A 216 ALA A 228 1 13 HELIX 16 16 ASP A 241 ILE A 251 1 11 HELIX 17 17 THR A 295 ARG A 300 1 6 HELIX 18 18 PRO A 309 VAL A 319 1 11 HELIX 19 19 LYS A 334 GLY A 340 5 7 HELIX 20 20 GLY A 375 ALA A 383 1 9 HELIX 21 21 LYS A 385 GLN A 402 1 18 HELIX 22 22 PRO A 404 PHE A 411 1 8 HELIX 23 23 SER A 421 ASP A 423 5 3 HELIX 24 24 TYR A 436 ALA A 447 1 12 HELIX 25 25 GLY A 456 ALA A 460 5 5 HELIX 26 26 TRP A 465 SER A 484 1 20 HELIX 27 27 LEU B 7 ARG B 12 1 6 HELIX 28 28 ASP B 15 GLY B 26 1 12 HELIX 29 29 GLY B 42 GLY B 56 1 15 HELIX 30 30 HIS B 95 PHE B 105 1 11 HELIX 31 31 VAL B 130 ASP B 136 1 7 HELIX 32 32 PRO B 137 LYS B 141 5 5 HELIX 33 33 LYS B 145 GLU B 149 5 5 HELIX 34 34 SER B 152 LEU B 161 1 10 HELIX 35 35 LEU B 161 LYS B 169 1 9 HELIX 36 36 ASN B 172 THR B 182 1 11 HELIX 37 37 SER B 184 GLU B 192 1 9 HELIX 38 38 SER B 196 LEU B 207 1 12 HELIX 39 39 GLU B 209 TYR B 213 5 5 HELIX 40 40 SER B 216 ALA B 228 1 13 HELIX 41 41 ASP B 241 ILE B 251 1 11 HELIX 42 42 THR B 295 ILE B 302 1 8 HELIX 43 43 PRO B 309 VAL B 319 1 11 HELIX 44 44 LYS B 334 GLY B 340 5 7 HELIX 45 45 GLY B 375 GLN B 382 1 8 HELIX 46 46 LYS B 385 HIS B 401 1 17 HELIX 47 47 PRO B 404 PHE B 411 1 8 HELIX 48 48 SER B 421 ASP B 423 5 3 HELIX 49 49 TYR B 436 ALA B 447 1 12 HELIX 50 50 GLY B 456 ALA B 460 5 5 HELIX 51 51 TRP B 465 SER B 484 1 20 HELIX 52 52 LEU C 7 ARG C 12 1 6 HELIX 53 53 ASP C 15 GLY C 26 1 12 HELIX 54 54 GLY C 42 ALA C 55 1 14 HELIX 55 55 HIS C 95 PHE C 105 1 11 HELIX 56 56 VAL C 130 ASP C 136 1 7 HELIX 57 57 PRO C 137 LYS C 141 5 5 HELIX 58 58 SER C 152 SER C 160 1 9 HELIX 59 59 LEU C 161 ARG C 170 1 10 HELIX 60 60 ASN C 172 ASP C 181 1 10 HELIX 61 61 SER C 184 GLU C 192 1 9 HELIX 62 62 SER C 196 LEU C 207 1 12 HELIX 63 63 GLU C 209 TYR C 213 5 5 HELIX 64 64 SER C 216 GLU C 230 1 15 HELIX 65 65 ASP C 241 ILE C 251 1 11 HELIX 66 66 THR C 295 ARG C 301 1 7 HELIX 67 67 PRO C 309 VAL C 319 1 11 HELIX 68 68 LYS C 334 GLY C 340 5 7 HELIX 69 69 GLY C 375 ALA C 383 1 9 HELIX 70 70 LYS C 385 GLN C 402 1 18 HELIX 71 71 PRO C 404 PHE C 411 1 8 HELIX 72 72 SER C 421 ASP C 423 5 3 HELIX 73 73 TYR C 436 ALA C 447 1 12 HELIX 74 74 GLY C 456 ALA C 460 5 5 HELIX 75 75 TRP C 465 SER C 484 1 20 HELIX 76 76 LEU D 7 ARG D 12 5 6 HELIX 77 77 ASP D 15 GLY D 26 1 12 HELIX 78 78 GLY D 42 ALA D 55 1 14 HELIX 79 79 HIS D 95 PHE D 105 1 11 HELIX 80 80 VAL D 130 ASP D 136 1 7 HELIX 81 81 PRO D 137 LYS D 141 5 5 HELIX 82 82 LYS D 145 GLU D 149 5 5 HELIX 83 83 SER D 152 SER D 160 1 9 HELIX 84 84 LEU D 161 ARG D 170 1 10 HELIX 85 85 ASN D 172 TYR D 180 1 9 HELIX 86 86 SER D 184 GLU D 192 1 9 HELIX 87 87 SER D 196 LEU D 207 1 12 HELIX 88 88 GLU D 209 TYR D 213 5 5 HELIX 89 89 SER D 216 ALA D 228 1 13 HELIX 90 90 ASP D 241 ALA D 250 1 10 HELIX 91 91 ILE D 251 GLU D 253 5 3 HELIX 92 92 THR D 295 ARG D 301 1 7 HELIX 93 93 PRO D 309 VAL D 319 1 11 HELIX 94 94 LYS D 334 GLY D 340 5 7 HELIX 95 95 GLY D 375 PHE D 381 1 7 HELIX 96 96 LYS D 385 HIS D 401 1 17 HELIX 97 97 PRO D 404 PHE D 411 1 8 HELIX 98 98 SER D 421 ASP D 423 5 3 HELIX 99 99 TYR D 436 ALA D 447 1 12 HELIX 100 100 GLY D 456 ALA D 460 5 5 HELIX 101 101 TRP D 465 GLU D 485 1 21 SHEET 1 A 5 VAL A 255 LYS A 256 0 SHEET 2 A 5 LYS A 58 LEU A 62 1 N VAL A 61 O LYS A 256 SHEET 3 A 5 HIS A 35 VAL A 39 1 N VAL A 38 O THR A 60 SHEET 4 A 5 TYR A 289 VAL A 292 1 O ILE A 291 N VAL A 39 SHEET 5 A 5 ILE A 452 PHE A 454 1 O PHE A 453 N VAL A 290 SHEET 1 B 2 THR A 74 ASN A 77 0 SHEET 2 B 2 TRP A 82 ASN A 85 -1 O ALA A 84 N HIS A 75 SHEET 1 C 3 ILE A 91 PRO A 92 0 SHEET 2 C 3 PHE A 233 ILE A 236 -1 O ASP A 234 N ILE A 91 SHEET 3 C 3 LEU A 109 PHE A 112 -1 N PHE A 112 O PHE A 233 SHEET 1 D 7 ILE A 126 ARG A 129 0 SHEET 2 D 7 TRP A 120 ILE A 123 -1 N ILE A 123 O ILE A 126 SHEET 3 D 7 LYS A 345 THR A 348 1 O THR A 347 N PHE A 122 SHEET 4 D 7 PHE A 354 TYR A 356 -1 O ILE A 355 N SER A 346 SHEET 5 D 7 GLY A 367 ILE A 374 -1 O ILE A 370 N TYR A 356 SHEET 6 D 7 GLY A 324 CYS A 331 -1 N CYS A 331 O GLY A 367 SHEET 7 D 7 CYS A 412 LYS A 419 -1 O MET A 416 N PHE A 328 SHEET 1 E 4 SER A 283 ALA A 287 0 SHEET 2 E 4 VAL A 271 GLN A 276 -1 N TYR A 275 O SER A 283 SHEET 3 E 4 ARG A 260 GLN A 266 -1 N GLN A 265 O THR A 272 SHEET 4 E 4 GLN A 303 GLU A 305 1 O GLU A 305 N ILE A 264 SHEET 1 F 2 TYR A 321 ARG A 322 0 SHEET 2 F 2 ILE A 430 THR A 431 -1 O ILE A 430 N ARG A 322 SHEET 1 G 5 VAL B 255 PHE B 257 0 SHEET 2 G 5 LYS B 58 GLU B 63 1 N GLU B 63 O LYS B 256 SHEET 3 G 5 HIS B 35 VAL B 39 1 N VAL B 38 O THR B 60 SHEET 4 G 5 TYR B 289 VAL B 292 1 O TYR B 289 N VAL B 37 SHEET 5 G 5 ILE B 452 PHE B 454 1 O PHE B 453 N VAL B 290 SHEET 1 H 2 THR B 74 ASN B 77 0 SHEET 2 H 2 TRP B 82 ASN B 85 -1 O TRP B 82 N ASN B 77 SHEET 1 I 3 ILE B 91 PRO B 92 0 SHEET 2 I 3 PHE B 233 ILE B 236 -1 O ASP B 234 N ILE B 91 SHEET 3 I 3 LEU B 109 PHE B 112 -1 N ASN B 110 O GLU B 235 SHEET 1 J 7 ILE B 126 ARG B 129 0 SHEET 2 J 7 TRP B 120 ILE B 123 -1 N TYR B 121 O LYS B 128 SHEET 3 J 7 LYS B 345 THR B 348 1 O THR B 347 N TRP B 120 SHEET 4 J 7 PHE B 354 TYR B 356 -1 O ILE B 355 N SER B 346 SHEET 5 J 7 GLY B 367 ILE B 374 -1 O ILE B 370 N TYR B 356 SHEET 6 J 7 GLY B 324 CYS B 331 -1 N CYS B 331 O GLY B 367 SHEET 7 J 7 CYS B 412 LYS B 419 -1 O MET B 416 N PHE B 328 SHEET 1 K 4 SER B 283 ALA B 287 0 SHEET 2 K 4 VAL B 271 GLN B 276 -1 N TYR B 275 O SER B 283 SHEET 3 K 4 ARG B 260 GLN B 266 -1 N GLN B 265 O THR B 272 SHEET 4 K 4 GLN B 303 GLU B 305 1 O GLU B 305 N ILE B 264 SHEET 1 L 2 TYR B 321 ARG B 322 0 SHEET 2 L 2 ILE B 430 THR B 431 -1 O ILE B 430 N ARG B 322 SHEET 1 M 5 VAL C 255 LYS C 256 0 SHEET 2 M 5 LYS C 58 LEU C 62 1 N VAL C 61 O LYS C 256 SHEET 3 M 5 HIS C 35 VAL C 39 1 N VAL C 38 O THR C 60 SHEET 4 M 5 TYR C 289 VAL C 292 1 O ILE C 291 N VAL C 39 SHEET 5 M 5 ILE C 452 PHE C 454 1 O PHE C 453 N VAL C 292 SHEET 1 N 2 THR C 74 ASN C 77 0 SHEET 2 N 2 TRP C 82 ASN C 85 -1 O ALA C 84 N HIS C 75 SHEET 1 O 3 ILE C 91 PRO C 92 0 SHEET 2 O 3 PHE C 233 ILE C 236 -1 O ASP C 234 N ILE C 91 SHEET 3 O 3 LEU C 109 PHE C 112 -1 N PHE C 112 O PHE C 233 SHEET 1 P 7 ILE C 126 ARG C 129 0 SHEET 2 P 7 TRP C 120 ILE C 123 -1 N TYR C 121 O LYS C 128 SHEET 3 P 7 LYS C 345 THR C 348 1 O THR C 347 N PHE C 122 SHEET 4 P 7 PHE C 354 TYR C 356 -1 O ILE C 355 N SER C 346 SHEET 5 P 7 GLY C 367 ILE C 374 -1 O ILE C 370 N TYR C 356 SHEET 6 P 7 GLY C 324 CYS C 331 -1 N CYS C 331 O GLY C 367 SHEET 7 P 7 CYS C 412 LYS C 419 -1 O SER C 415 N PHE C 328 SHEET 1 Q 4 SER C 283 ALA C 287 0 SHEET 2 Q 4 VAL C 271 GLN C 276 -1 N VAL C 273 O ASN C 285 SHEET 3 Q 4 ARG C 260 GLN C 266 -1 N LYS C 263 O THR C 274 SHEET 4 Q 4 GLN C 303 GLU C 305 1 O GLN C 303 N ILE C 264 SHEET 1 R 2 TYR C 321 ARG C 322 0 SHEET 2 R 2 ILE C 430 THR C 431 -1 O ILE C 430 N ARG C 322 SHEET 1 S 5 VAL D 255 LYS D 256 0 SHEET 2 S 5 LYS D 58 LEU D 62 1 N VAL D 61 O LYS D 256 SHEET 3 S 5 HIS D 35 VAL D 39 1 N VAL D 36 O LYS D 58 SHEET 4 S 5 TYR D 289 VAL D 292 1 O ILE D 291 N VAL D 39 SHEET 5 S 5 ILE D 452 PHE D 454 1 O PHE D 453 N VAL D 292 SHEET 1 T 2 THR D 74 ASN D 77 0 SHEET 2 T 2 TRP D 82 ASN D 85 -1 O ALA D 84 N HIS D 75 SHEET 1 U 3 ILE D 91 PRO D 92 0 SHEET 2 U 3 PHE D 233 ILE D 236 -1 O ASP D 234 N ILE D 91 SHEET 3 U 3 LEU D 109 PHE D 112 -1 N ASN D 110 O GLU D 235 SHEET 1 V 7 ILE D 126 ARG D 129 0 SHEET 2 V 7 TRP D 120 ILE D 123 -1 N TYR D 121 O LYS D 128 SHEET 3 V 7 LYS D 345 THR D 348 1 O THR D 347 N TRP D 120 SHEET 4 V 7 PHE D 354 TYR D 356 -1 O ILE D 355 N SER D 346 SHEET 5 V 7 GLY D 367 ILE D 374 -1 O ILE D 370 N TYR D 356 SHEET 6 V 7 GLY D 324 CYS D 331 -1 N CYS D 331 O GLY D 367 SHEET 7 V 7 CYS D 412 LYS D 419 -1 O SER D 415 N PHE D 328 SHEET 1 W 4 SER D 283 ALA D 287 0 SHEET 2 W 4 GLN D 270 GLN D 276 -1 N VAL D 273 O ASN D 285 SHEET 3 W 4 ARG D 260 ASN D 267 -1 N LYS D 263 O THR D 274 SHEET 4 W 4 GLN D 303 GLU D 305 1 O GLN D 303 N ILE D 264 SHEET 1 X 2 TYR D 321 ARG D 322 0 SHEET 2 X 2 ILE D 430 THR D 431 -1 O ILE D 430 N ARG D 322 SSBOND 1 CYS A 10 CYS A 173 1555 1555 2.03 SSBOND 2 CYS A 331 CYS A 412 1555 1555 2.03 SSBOND 3 CYS B 10 CYS B 173 1555 1555 2.03 SSBOND 4 CYS B 331 CYS B 412 1555 1555 1.92 SSBOND 5 CYS C 10 CYS C 173 1555 1555 2.04 SSBOND 6 CYS C 331 CYS C 412 1555 1555 2.05 SSBOND 7 CYS D 10 CYS D 173 1555 1555 2.04 SSBOND 8 CYS D 331 CYS D 412 1555 1555 2.03 LINK ND2 ASN A 172 C1 NAG A 488 1555 1555 1.46 LINK ND2 ASN B 172 C1 NAG B 488 1555 1555 1.46 LINK ND2 ASN C 172 C1 NAG C 488 1555 1555 1.46 LINK ND2 ASN D 172 C1 NAG D 488 1555 1555 1.46 LINK ND1 HIS A 75 ZN ZN A 489 1555 1555 2.20 LINK OE2 GLU A 279 ZN ZN D 489 1555 1555 2.25 LINK OE1 GLU A 279 ZN ZN D 489 1555 1555 2.55 LINK ZN ZN A 489 OE2 GLU D 279 1555 1555 2.39 LINK ZN ZN A 489 OE1 GLU D 279 1555 1555 2.59 LINK ZN ZN A 489 O HOH D 490 1555 1555 2.28 LINK ZN ZN A 489 O HOH D 491 1555 1555 2.60 LINK O HOH A 493 ZN ZN D 489 1555 1555 2.36 LINK ND1 HIS B 75 ZN ZN B 489 1555 1555 2.16 LINK OE2 GLU B 279 ZN ZN C 489 1555 1555 1.85 LINK ZN ZN B 489 OE2 GLU C 279 1555 1555 2.11 LINK ZN ZN B 489 O HOH C 490 1555 1555 2.24 LINK ZN ZN B 489 O HOH C 491 1555 1555 2.40 LINK ND1 HIS C 75 ZN ZN C 489 1555 1555 1.88 LINK ZN ZN C 489 O HOH C 492 1555 1555 2.16 LINK ND1 HIS D 75 ZN ZN D 489 1555 1555 1.92 CISPEP 1 GLU A 305 PRO A 306 0 0.05 CISPEP 2 GLU B 305 PRO B 306 0 -10.68 CISPEP 3 GLU C 305 PRO C 306 0 -8.38 CISPEP 4 GLU D 305 PRO D 306 0 -7.19 CRYST1 196.978 95.839 108.442 90.00 92.53 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005077 0.000000 0.000224 0.00000 SCALE2 0.000000 0.010434 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009231 0.00000