HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 08-DEC-09 3KZT TITLE CRYSTAL STRUCTURE OF PROTEIN OF UNKNOWN FUNCTION (NP_812423.1) FROM TITLE 2 BACTEROIDES THETAIOTAOMICRON VPI-5482 AT 2.10 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES THETAIOTAOMICRON; SOURCE 3 ORGANISM_TAXID: 226186; SOURCE 4 STRAIN: VPI-5482; SOURCE 5 GENE: BT_3511; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS PROTEIN OF UNKNOWN FUNCTION, STRUCTURAL GENOMICS, JOINT CENTER FOR KEYWDS 2 STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-2, KEYWDS 3 UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 5 01-FEB-23 3KZT 1 REMARK SEQADV LINK REVDAT 4 17-JUL-19 3KZT 1 REMARK LINK REVDAT 3 01-NOV-17 3KZT 1 REMARK REVDAT 2 13-JUL-11 3KZT 1 VERSN REVDAT 1 02-FEB-10 3KZT 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF PROTEIN OF UNKNOWN FUNCTION JRNL TITL 2 (NP_812423.1) FROM BACTEROIDES THETAIOTAOMICRON VPI-5482 AT JRNL TITL 3 2.10 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0053 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.56 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 16067 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.224 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 805 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1059 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2980 REMARK 3 BIN FREE R VALUE SET COUNT : 66 REMARK 3 BIN FREE R VALUE : 0.3140 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2044 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 118 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 30.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.48000 REMARK 3 B22 (A**2) : 1.62000 REMARK 3 B33 (A**2) : -1.14000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.299 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.224 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.170 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.661 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.907 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2264 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1522 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3089 ; 1.289 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3757 ; 1.188 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 306 ; 4.127 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 119 ;31.422 ;25.798 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 417 ;12.491 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;10.635 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 349 ; 0.100 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2573 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 427 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1379 ; 0.282 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 554 ; 0.057 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2251 ; 0.526 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 885 ; 0.856 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 816 ; 1.344 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 36 A 165 5 REMARK 3 1 B 36 B 165 5 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 744 ; 0.240 ; 0.500 REMARK 3 LOOSE POSITIONAL 1 A (A): 851 ; 0.470 ; 5.000 REMARK 3 MEDIUM THERMAL 1 A (A**2): 744 ; 0.300 ; 2.000 REMARK 3 LOOSE THERMAL 1 A (A**2): 851 ; 0.290 ;10.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 35 A 74 REMARK 3 ORIGIN FOR THE GROUP (A): 30.8360 15.1990 12.8930 REMARK 3 T TENSOR REMARK 3 T11: 0.2593 T22: 0.2108 REMARK 3 T33: 0.0513 T12: -0.0279 REMARK 3 T13: 0.0162 T23: -0.0229 REMARK 3 L TENSOR REMARK 3 L11: 6.1699 L22: 0.9896 REMARK 3 L33: 5.5955 L12: 0.9820 REMARK 3 L13: 4.4853 L23: 0.4254 REMARK 3 S TENSOR REMARK 3 S11: -0.0798 S12: 0.1761 S13: 0.0690 REMARK 3 S21: -0.0228 S22: 0.0768 S23: -0.1154 REMARK 3 S31: -0.1014 S32: 0.2357 S33: 0.0030 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 75 A 100 REMARK 3 ORIGIN FOR THE GROUP (A): 36.2890 27.2180 19.8190 REMARK 3 T TENSOR REMARK 3 T11: 0.3756 T22: 0.2019 REMARK 3 T33: 0.2315 T12: -0.0887 REMARK 3 T13: -0.0678 T23: -0.0344 REMARK 3 L TENSOR REMARK 3 L11: 11.3219 L22: 2.7397 REMARK 3 L33: 1.7702 L12: -1.8755 REMARK 3 L13: 2.0792 L23: -1.1606 REMARK 3 S TENSOR REMARK 3 S11: -0.4919 S12: 0.2625 S13: 1.4672 REMARK 3 S21: -0.2333 S22: 0.1395 S23: -0.4355 REMARK 3 S31: -0.5440 S32: 0.1950 S33: 0.3524 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 101 A 116 REMARK 3 ORIGIN FOR THE GROUP (A): 36.8260 15.4040 27.6160 REMARK 3 T TENSOR REMARK 3 T11: 0.2625 T22: 0.4784 REMARK 3 T33: 0.0712 T12: -0.0719 REMARK 3 T13: 0.0059 T23: 0.0786 REMARK 3 L TENSOR REMARK 3 L11: 1.8241 L22: 9.0289 REMARK 3 L33: 10.5043 L12: 0.2390 REMARK 3 L13: 4.3431 L23: 0.2495 REMARK 3 S TENSOR REMARK 3 S11: 0.0227 S12: -0.0581 S13: -0.1059 REMARK 3 S21: -0.0828 S22: 0.1458 S23: -0.2164 REMARK 3 S31: -0.0206 S32: 0.1100 S33: -0.1686 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 117 A 166 REMARK 3 ORIGIN FOR THE GROUP (A): 26.8910 16.3440 21.0550 REMARK 3 T TENSOR REMARK 3 T11: 0.2657 T22: 0.2181 REMARK 3 T33: 0.0341 T12: 0.0177 REMARK 3 T13: 0.0231 T23: -0.0270 REMARK 3 L TENSOR REMARK 3 L11: 3.4734 L22: 2.0385 REMARK 3 L33: 6.0771 L12: -1.8329 REMARK 3 L13: 3.9434 L23: -3.0746 REMARK 3 S TENSOR REMARK 3 S11: -0.0907 S12: -0.2570 S13: -0.1067 REMARK 3 S21: 0.0257 S22: 0.1634 S23: 0.1104 REMARK 3 S31: -0.1430 S32: -0.2722 S33: -0.0727 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 36 B 62 REMARK 3 ORIGIN FOR THE GROUP (A): 45.5410 -9.4320 24.0440 REMARK 3 T TENSOR REMARK 3 T11: 0.3041 T22: 0.1725 REMARK 3 T33: 0.0710 T12: -0.0254 REMARK 3 T13: 0.0009 T23: 0.0052 REMARK 3 L TENSOR REMARK 3 L11: 0.5391 L22: 6.5258 REMARK 3 L33: 2.5106 L12: 0.2986 REMARK 3 L13: -0.2251 L23: -3.0160 REMARK 3 S TENSOR REMARK 3 S11: -0.0156 S12: 0.0082 S13: -0.0708 REMARK 3 S21: 0.0484 S22: 0.2385 S23: 0.1026 REMARK 3 S31: 0.0580 S32: -0.3442 S33: -0.2229 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 63 B 87 REMARK 3 ORIGIN FOR THE GROUP (A): 50.9680 10.8040 14.9230 REMARK 3 T TENSOR REMARK 3 T11: 0.3542 T22: 0.2634 REMARK 3 T33: 0.1963 T12: -0.0562 REMARK 3 T13: 0.1336 T23: -0.0461 REMARK 3 L TENSOR REMARK 3 L11: 1.2486 L22: 4.5375 REMARK 3 L33: 3.6900 L12: 1.2875 REMARK 3 L13: -1.2673 L23: 1.3972 REMARK 3 S TENSOR REMARK 3 S11: 0.4319 S12: -0.1805 S13: 0.2053 REMARK 3 S21: 0.2349 S22: -0.1615 S23: -0.0524 REMARK 3 S31: -0.4484 S32: 0.1671 S33: -0.2704 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 88 B 109 REMARK 3 ORIGIN FOR THE GROUP (A): 57.9490 2.6220 6.7730 REMARK 3 T TENSOR REMARK 3 T11: 0.3063 T22: 0.3011 REMARK 3 T33: 0.1105 T12: 0.0316 REMARK 3 T13: 0.0767 T23: 0.0310 REMARK 3 L TENSOR REMARK 3 L11: 1.8162 L22: 4.2229 REMARK 3 L33: 3.9242 L12: -0.1845 REMARK 3 L13: 0.8469 L23: -1.9368 REMARK 3 S TENSOR REMARK 3 S11: -0.0498 S12: 0.0576 S13: -0.1325 REMARK 3 S21: -0.2299 S22: -0.2320 S23: -0.5184 REMARK 3 S31: 0.2940 S32: 0.6699 S33: 0.2819 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 110 B 165 REMARK 3 ORIGIN FOR THE GROUP (A): 46.3930 -4.0030 11.5280 REMARK 3 T TENSOR REMARK 3 T11: 0.2524 T22: 0.1959 REMARK 3 T33: 0.0258 T12: -0.0053 REMARK 3 T13: 0.0206 T23: 0.0042 REMARK 3 L TENSOR REMARK 3 L11: 1.4565 L22: 2.1542 REMARK 3 L33: 5.3480 L12: -1.3293 REMARK 3 L13: 1.9547 L23: -2.8645 REMARK 3 S TENSOR REMARK 3 S11: 0.1081 S12: 0.0141 S13: -0.0391 REMARK 3 S21: -0.1413 S22: 0.0012 S23: 0.1099 REMARK 3 S31: 0.3121 S32: 0.1187 S33: -0.1094 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. ATOM RECORDS CONTAIN RESIDUAL B FACTORS REMARK 3 ONLY. 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE REMARK 3 ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REMARK 3 REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. REMARK 3 ETHYLENE GLYCOL (EDO) AND SULFATE IONS (SO4) FROM THE REMARK 3 CRYSTALLIZATION/CRYOPROTECTANT SOLUTIONS HAVE BEEN MODELED INTO REMARK 3 THE SOLVENT STRUCTURE. 5. TLS GROUPS WERE ASSIGNED WITH THE AID REMARK 3 OF THE TLSMD SERVER. REMARK 4 REMARK 4 3KZT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-DEC-09. REMARK 100 THE DEPOSITION ID IS D_1000056653. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUN-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91837,0.97916 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR (HORIZONTAL REMARK 200 FOCUSING) REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.5 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16114 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 28.560 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.10800 REMARK 200 R SYM (I) : 0.10800 REMARK 200 FOR THE DATA SET : 9.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.62900 REMARK 200 R SYM FOR SHELL (I) : 0.62900 REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHELXD, AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.97 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.0000M AMMONIUM SULFATE, 0.1M MES PH REMARK 280 5.8, NANODROP, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.84900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.26650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 23.13050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 65.26650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.84900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 23.13050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 LYS A 26 REMARK 465 ASN A 27 REMARK 465 MSE A 28 REMARK 465 ASP A 29 REMARK 465 THR A 30 REMARK 465 SER A 31 REMARK 465 ALA A 32 REMARK 465 GLU A 33 REMARK 465 PRO A 34 REMARK 465 ASN A 167 REMARK 465 GLY B 0 REMARK 465 LYS B 26 REMARK 465 ASN B 27 REMARK 465 MSE B 28 REMARK 465 ASP B 29 REMARK 465 THR B 30 REMARK 465 SER B 31 REMARK 465 ALA B 32 REMARK 465 GLU B 33 REMARK 465 PRO B 34 REMARK 465 ALA B 35 REMARK 465 GLU B 166 REMARK 465 ASN B 167 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 68 OG REMARK 470 THR A 69 OG1 CG2 REMARK 470 LYS A 71 CE NZ REMARK 470 LYS A 87 CG CD CE NZ REMARK 470 GLU A 98 CD OE1 OE2 REMARK 470 LYS B 117 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 36 76.60 52.51 REMARK 500 LEU A 124 -75.51 -99.96 REMARK 500 ASP A 126 -126.17 53.36 REMARK 500 PRO A 165 132.75 -34.14 REMARK 500 LEU B 124 -69.48 -102.56 REMARK 500 ASP B 126 -123.16 52.76 REMARK 500 THR B 164 70.15 53.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 203 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 392985 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 SEQUENCE THIS CONSTRUCT (RESIDUES 26-167) WAS EXPRESSED WITH THE REMARK 999 PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV REMARK 999 PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 3KZT A 26 167 UNP Q8A1Z7 Q8A1Z7_BACTN 26 167 DBREF 3KZT B 26 167 UNP Q8A1Z7 Q8A1Z7_BACTN 26 167 SEQADV 3KZT GLY A 0 UNP Q8A1Z7 EXPRESSION TAG SEQADV 3KZT GLY B 0 UNP Q8A1Z7 EXPRESSION TAG SEQRES 1 A 143 GLY LYS ASN MSE ASP THR SER ALA GLU PRO ALA ASP VAL SEQRES 2 A 143 GLN ALA ASN VAL SER ASP SER SER ARG ILE GLU GLN GLU SEQRES 3 A 143 ALA ILE GLY MSE ILE GLU ASP PHE TYR GLU ALA TYR ALA SEQRES 4 A 143 ALA SER PHE MSE SER THR GLY LYS GLU ALA LEU ALA LEU SEQRES 5 A 143 GLY ASP SER ILE LYS GLN LYS PHE LEU THR LYS GLU LEU SEQRES 6 A 143 ILE GLU LYS VAL ASP ARG LEU ILE GLU ALA THR ASP ALA SEQRES 7 A 143 ASP PRO ILE ILE ARG ALA GLN ASP LEU GLY GLU ASN ASP SEQRES 8 A 143 MSE LYS THR LEU SER VAL LYS HIS LEU ASN ASP ASN TRP SEQRES 9 A 143 TYR GLU VAL ASN TYR THR SER ALA LYS GLY SER GLN TYR SEQRES 10 A 143 GLU ARG ALA VAL SER ILE PRO VAL ARG VAL VAL ASN VAL SEQRES 11 A 143 ASP GLY GLN TYR LEU ILE ASP ASP ILE THR PRO GLU ASN SEQRES 1 B 143 GLY LYS ASN MSE ASP THR SER ALA GLU PRO ALA ASP VAL SEQRES 2 B 143 GLN ALA ASN VAL SER ASP SER SER ARG ILE GLU GLN GLU SEQRES 3 B 143 ALA ILE GLY MSE ILE GLU ASP PHE TYR GLU ALA TYR ALA SEQRES 4 B 143 ALA SER PHE MSE SER THR GLY LYS GLU ALA LEU ALA LEU SEQRES 5 B 143 GLY ASP SER ILE LYS GLN LYS PHE LEU THR LYS GLU LEU SEQRES 6 B 143 ILE GLU LYS VAL ASP ARG LEU ILE GLU ALA THR ASP ALA SEQRES 7 B 143 ASP PRO ILE ILE ARG ALA GLN ASP LEU GLY GLU ASN ASP SEQRES 8 B 143 MSE LYS THR LEU SER VAL LYS HIS LEU ASN ASP ASN TRP SEQRES 9 B 143 TYR GLU VAL ASN TYR THR SER ALA LYS GLY SER GLN TYR SEQRES 10 B 143 GLU ARG ALA VAL SER ILE PRO VAL ARG VAL VAL ASN VAL SEQRES 11 B 143 ASP GLY GLN TYR LEU ILE ASP ASP ILE THR PRO GLU ASN MODRES 3KZT MSE A 54 MET SELENOMETHIONINE MODRES 3KZT MSE A 67 MET SELENOMETHIONINE MODRES 3KZT MSE A 116 MET SELENOMETHIONINE MODRES 3KZT MSE B 54 MET SELENOMETHIONINE MODRES 3KZT MSE B 67 MET SELENOMETHIONINE MODRES 3KZT MSE B 116 MET SELENOMETHIONINE HET MSE A 54 8 HET MSE A 67 13 HET MSE A 116 8 HET MSE B 54 8 HET MSE B 67 13 HET MSE B 116 8 HET EDO A 201 4 HET EDO A 202 4 HET SO4 A 203 5 HET SO4 A 204 5 HET EDO B 201 4 HET EDO B 202 4 HET EDO B 203 4 HETNAM MSE SELENOMETHIONINE HETNAM EDO 1,2-ETHANEDIOL HETNAM SO4 SULFATE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 EDO 5(C2 H6 O2) FORMUL 5 SO4 2(O4 S 2-) FORMUL 10 HOH *118(H2 O) HELIX 1 1 ASP A 36 PHE A 66 1 31 HELIX 2 2 GLY A 70 LEU A 85 1 16 HELIX 3 3 THR A 86 THR A 100 1 15 HELIX 4 4 ASP A 115 LEU A 119 5 5 HELIX 5 5 ASP B 36 PHE B 66 1 31 HELIX 6 6 GLY B 70 LEU B 85 1 16 HELIX 7 7 THR B 86 THR B 100 1 15 HELIX 8 8 ASP B 115 LEU B 119 5 5 SHEET 1 A 4 SER A 120 ASN A 125 0 SHEET 2 A 4 TRP A 128 SER A 135 -1 O ASN A 132 N SER A 120 SHEET 3 A 4 ARG A 143 VAL A 154 -1 O ARG A 143 N SER A 135 SHEET 4 A 4 GLN A 157 ILE A 163 -1 O LEU A 159 N VAL A 152 SHEET 1 B 4 SER B 120 ASN B 125 0 SHEET 2 B 4 TRP B 128 SER B 135 -1 O GLU B 130 N LYS B 122 SHEET 3 B 4 ARG B 143 VAL B 154 -1 O VAL B 149 N TYR B 129 SHEET 4 B 4 GLN B 157 ILE B 163 -1 O ASP B 162 N ARG B 150 LINK C GLY A 53 N MSE A 54 1555 1555 1.32 LINK C MSE A 54 N ILE A 55 1555 1555 1.34 LINK C PHE A 66 N MSE A 67 1555 1555 1.36 LINK C MSE A 67 N SER A 68 1555 1555 1.34 LINK C ASP A 115 N MSE A 116 1555 1555 1.34 LINK C MSE A 116 N LYS A 117 1555 1555 1.35 LINK C GLY B 53 N MSE B 54 1555 1555 1.33 LINK C MSE B 54 N ILE B 55 1555 1555 1.33 LINK C PHE B 66 N MSE B 67 1555 1555 1.35 LINK C MSE B 67 N SER B 68 1555 1555 1.35 LINK C ASP B 115 N MSE B 116 1555 1555 1.33 LINK C MSE B 116 N LYS B 117 1555 1555 1.35 SITE 1 AC1 5 ASN A 127 TYR A 129 VAL A 151 HOH A 240 SITE 2 AC1 5 TYR B 141 SITE 1 AC2 7 SER A 135 ALA A 136 TYR A 141 ARG A 143 SITE 2 AC2 7 ILE B 47 ASN B 153 TYR B 158 SITE 1 AC3 4 TRP A 128 ARG A 150 HOH A 250 EDO B 202 SITE 1 AC4 4 ARG A 107 SER A 146 PRO A 148 THR A 164 SITE 1 AC5 1 ARG B 107 SITE 1 AC6 3 SO4 A 203 TRP B 128 ARG B 150 SITE 1 AC7 5 ILE A 47 ASN A 153 SER B 135 TYR B 141 SITE 2 AC7 5 ARG B 143 CRYST1 43.698 46.261 130.533 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022884 0.000000 0.000000 0.00000 SCALE2 0.000000 0.021616 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007661 0.00000