HEADER OXIDOREDUCTASE,HYDROLASE 09-DEC-09 3L07 TITLE METHYLENETETRAHYDROFOLATE DEHYDROGENASE/METHENYLTETRAHYDROFOLATE TITLE 2 CYCLOHYDROLASE, PUTATIVE BIFUNCTIONAL PROTEIN FOLD FROM FRANCISELLA TITLE 3 TULARENSIS. COMPND MOL_ID: 1; COMPND 2 MOLECULE: BIFUNCTIONAL PROTEIN FOLD; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: METHYLENETETRAHYDROFOLATE DEHYDROGENASE, COMPND 5 METHENYLTETRAHYDROFOLATE CYCLOHYDROLASE; COMPND 6 EC: 1.5.1.5, 3.5.4.9; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: FRANCISELLA TULARENSIS; SOURCE 3 ORGANISM_TAXID: 177416; SOURCE 4 STRAIN: SUBSP. TULARENSIS SCHU S4; SOURCE 5 GENE: FOLD, FTW_1287; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS STRUCTURAL GENOMICS, IDP01849, METHYLENETETRAHYDROFOLATE KEYWDS 2 DEHYDROGENASE, METHENYLTETRAHYDROFOLATE CYCLOHYDROLASE, BIFUNCTIONAL KEYWDS 3 PROTEIN, AMINO-ACID BIOSYNTHESIS, HISTIDINE BIOSYNTHESIS, HYDROLASE, KEYWDS 4 METHIONINE BIOSYNTHESIS, MULTIFUNCTIONAL ENZYME, NADP, ONE-CARBON KEYWDS 5 METABOLISM, OXIDOREDUCTASE, PURINE BIOSYNTHESIS, CENTER FOR KEYWDS 6 STRUCTURAL GENOMICS OF INFECTIOUS DISEASES, CSGID EXPDTA X-RAY DIFFRACTION AUTHOR J.OSIPIUK,N.MALTSEVA,R.MULLIGAN,J.HASSEMAN,W.F.ANDERSON,A.JOACHIMIAK, AUTHOR 2 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 4 06-SEP-23 3L07 1 REMARK SEQADV REVDAT 3 01-NOV-17 3L07 1 REMARK REVDAT 2 13-JUL-11 3L07 1 VERSN REVDAT 1 22-DEC-09 3L07 0 JRNL AUTH J.OSIPIUK,N.MALTSEVA,R.MULLIGAN,J.HASSEMAN,W.F.ANDERSON, JRNL AUTH 2 A.JOACHIMIAK JRNL TITL X-RAY CRYSTAL STRUCTURE OF METHYLENETETRAHYDROFOLATE JRNL TITL 2 DEHYDROGENASE/METHENYLTETRAHYDROFOLATE CYCLOHYDROLASE, JRNL TITL 3 PUTATIVE BIFUNCTIONAL PROTEIN FOLD FROM FRANCISELLA JRNL TITL 4 TULARENSIS. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.88 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.88 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.20 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 45643 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2302 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.88 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.93 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3019 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.19 REMARK 3 BIN R VALUE (WORKING SET) : 0.2240 REMARK 3 BIN FREE R VALUE SET COUNT : 164 REMARK 3 BIN FREE R VALUE : 0.2800 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4284 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 35 REMARK 3 SOLVENT ATOMS : 437 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 35.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.00000 REMARK 3 B22 (A**2) : -0.79000 REMARK 3 B33 (A**2) : -0.21000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.144 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.134 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.089 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.578 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4559 ; 0.020 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 3014 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6228 ; 1.663 ; 1.984 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7545 ; 0.982 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 622 ; 5.792 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 171 ;40.179 ;26.140 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 844 ;15.282 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;19.386 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 772 ; 0.105 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5020 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 765 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2917 ; 1.010 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1172 ; 0.322 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4794 ; 1.733 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1642 ; 2.821 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1404 ; 4.670 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 281 REMARK 3 RESIDUE RANGE : A 501 A 507 REMARK 3 RESIDUE RANGE : A 283 A 494 REMARK 3 ORIGIN FOR THE GROUP (A): 29.0392 -18.2313 -36.8087 REMARK 3 T TENSOR REMARK 3 T11: 0.0236 T22: 0.0239 REMARK 3 T33: 0.0496 T12: 0.0023 REMARK 3 T13: 0.0155 T23: -0.0195 REMARK 3 L TENSOR REMARK 3 L11: 1.1158 L22: 0.4036 REMARK 3 L33: 1.7860 L12: -0.1227 REMARK 3 L13: -0.1535 L23: -0.0008 REMARK 3 S TENSOR REMARK 3 S11: 0.0100 S12: 0.0569 S13: -0.0244 REMARK 3 S21: -0.0417 S22: 0.0278 S23: -0.0897 REMARK 3 S31: -0.0927 S32: 0.0926 S33: -0.0378 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -2 B 282 REMARK 3 RESIDUE RANGE : B 502 B 508 REMARK 3 RESIDUE RANGE : B 283 B 511 REMARK 3 ORIGIN FOR THE GROUP (A): 2.6880 -16.5807 -19.9750 REMARK 3 T TENSOR REMARK 3 T11: 0.0699 T22: 0.0139 REMARK 3 T33: 0.0636 T12: 0.0170 REMARK 3 T13: 0.0427 T23: 0.0124 REMARK 3 L TENSOR REMARK 3 L11: 1.1295 L22: 0.6327 REMARK 3 L33: 1.3245 L12: -0.0269 REMARK 3 L13: 0.3526 L23: 0.2648 REMARK 3 S TENSOR REMARK 3 S11: -0.0361 S12: -0.0612 S13: -0.0334 REMARK 3 S21: 0.0532 S22: -0.0131 S23: 0.1297 REMARK 3 S31: 0.1061 S32: 0.0517 S33: 0.0492 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 3L07 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-DEC-09. REMARK 100 THE DEPOSITION ID IS D_1000056667. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-NOV-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45729 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.880 REMARK 200 RESOLUTION RANGE LOW (A) : 43.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.88 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.91 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.1 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 0.80500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.780 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP, HKL-3000 REMARK 200 STARTING MODEL: PDB ENTRY 1A4I REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM ACETATE, 0.1 M HEPES REMARK 280 BUFFRE, 25% PEG-3350, 10 MM NADP, PH 7.5, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.14950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.45800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.69250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.45800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.14950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.69250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ARG A 282 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU B 79 O HOH B 380 1.94 REMARK 500 O HOH A 320 O HOH A 434 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS B 136 CB CYS B 136 SG -0.169 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 5 CB - CG - OD1 ANGL. DEV. = 6.3 DEGREES REMARK 500 LEU A 94 CA - CB - CG ANGL. DEV. = 18.9 DEGREES REMARK 500 ARG B 150 NE - CZ - NH1 ANGL. DEV. = 4.7 DEGREES REMARK 500 ARG B 150 NE - CZ - NH2 ANGL. DEV. = -5.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 170 -58.79 -134.40 REMARK 500 HIS A 189 -169.82 -161.56 REMARK 500 VAL B 170 -60.98 -133.92 REMARK 500 HIS B 189 -165.03 -164.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IMD B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IMD A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 508 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: IDP01849 RELATED DB: TARGETDB DBREF 3L07 A 1 282 UNP A4IYR4 FOLD_FRATW 1 282 DBREF 3L07 B 1 282 UNP A4IYR4 FOLD_FRATW 1 282 SEQADV 3L07 SER A -2 UNP A4IYR4 EXPRESSION TAG SEQADV 3L07 ASN A -1 UNP A4IYR4 EXPRESSION TAG SEQADV 3L07 ALA A 0 UNP A4IYR4 EXPRESSION TAG SEQADV 3L07 SER B -2 UNP A4IYR4 EXPRESSION TAG SEQADV 3L07 ASN B -1 UNP A4IYR4 EXPRESSION TAG SEQADV 3L07 ALA B 0 UNP A4IYR4 EXPRESSION TAG SEQRES 1 A 285 SER ASN ALA MET ILE LEU ILE ASP GLY LYS SER LEU SER SEQRES 2 A 285 LYS ASP LEU LYS GLU ARG LEU ALA THR GLN VAL GLN GLU SEQRES 3 A 285 TYR LYS HIS HIS THR ALA ILE THR PRO LYS LEU VAL ALA SEQRES 4 A 285 ILE ILE VAL GLY ASN ASP PRO ALA SER LYS THR TYR VAL SEQRES 5 A 285 ALA SER LYS GLU LYS ALA CYS ALA GLN VAL GLY ILE ASP SEQRES 6 A 285 SER GLN VAL ILE THR LEU PRO GLU HIS THR THR GLU SER SEQRES 7 A 285 GLU LEU LEU GLU LEU ILE ASP GLN LEU ASN ASN ASP SER SEQRES 8 A 285 SER VAL HIS ALA ILE LEU VAL GLN LEU PRO LEU PRO ALA SEQRES 9 A 285 HIS ILE ASN LYS ASN ASN VAL ILE TYR SER ILE LYS PRO SEQRES 10 A 285 GLU LYS ASP VAL ASP GLY PHE HIS PRO THR ASN VAL GLY SEQRES 11 A 285 ARG LEU GLN LEU ARG ASP LYS LYS CYS LEU GLU SER CYS SEQRES 12 A 285 THR PRO LYS GLY ILE MET THR MET LEU ARG GLU TYR GLY SEQRES 13 A 285 ILE LYS THR GLU GLY ALA TYR ALA VAL VAL VAL GLY ALA SEQRES 14 A 285 SER ASN VAL VAL GLY LYS PRO VAL SER GLN LEU LEU LEU SEQRES 15 A 285 ASN ALA LYS ALA THR VAL THR THR CYS HIS ARG PHE THR SEQRES 16 A 285 THR ASP LEU LYS SER HIS THR THR LYS ALA ASP ILE LEU SEQRES 17 A 285 ILE VAL ALA VAL GLY LYS PRO ASN PHE ILE THR ALA ASP SEQRES 18 A 285 MET VAL LYS GLU GLY ALA VAL VAL ILE ASP VAL GLY ILE SEQRES 19 A 285 ASN HIS VAL ASP GLY LYS ILE VAL GLY ASP VAL ASP PHE SEQRES 20 A 285 ALA ALA VAL LYS ASP LYS VAL ALA ALA ILE THR PRO VAL SEQRES 21 A 285 PRO GLY GLY VAL GLY PRO MET THR ILE THR GLU LEU LEU SEQRES 22 A 285 TYR ASN THR PHE GLN CYS ALA GLN GLU LEU ASN ARG SEQRES 1 B 285 SER ASN ALA MET ILE LEU ILE ASP GLY LYS SER LEU SER SEQRES 2 B 285 LYS ASP LEU LYS GLU ARG LEU ALA THR GLN VAL GLN GLU SEQRES 3 B 285 TYR LYS HIS HIS THR ALA ILE THR PRO LYS LEU VAL ALA SEQRES 4 B 285 ILE ILE VAL GLY ASN ASP PRO ALA SER LYS THR TYR VAL SEQRES 5 B 285 ALA SER LYS GLU LYS ALA CYS ALA GLN VAL GLY ILE ASP SEQRES 6 B 285 SER GLN VAL ILE THR LEU PRO GLU HIS THR THR GLU SER SEQRES 7 B 285 GLU LEU LEU GLU LEU ILE ASP GLN LEU ASN ASN ASP SER SEQRES 8 B 285 SER VAL HIS ALA ILE LEU VAL GLN LEU PRO LEU PRO ALA SEQRES 9 B 285 HIS ILE ASN LYS ASN ASN VAL ILE TYR SER ILE LYS PRO SEQRES 10 B 285 GLU LYS ASP VAL ASP GLY PHE HIS PRO THR ASN VAL GLY SEQRES 11 B 285 ARG LEU GLN LEU ARG ASP LYS LYS CYS LEU GLU SER CYS SEQRES 12 B 285 THR PRO LYS GLY ILE MET THR MET LEU ARG GLU TYR GLY SEQRES 13 B 285 ILE LYS THR GLU GLY ALA TYR ALA VAL VAL VAL GLY ALA SEQRES 14 B 285 SER ASN VAL VAL GLY LYS PRO VAL SER GLN LEU LEU LEU SEQRES 15 B 285 ASN ALA LYS ALA THR VAL THR THR CYS HIS ARG PHE THR SEQRES 16 B 285 THR ASP LEU LYS SER HIS THR THR LYS ALA ASP ILE LEU SEQRES 17 B 285 ILE VAL ALA VAL GLY LYS PRO ASN PHE ILE THR ALA ASP SEQRES 18 B 285 MET VAL LYS GLU GLY ALA VAL VAL ILE ASP VAL GLY ILE SEQRES 19 B 285 ASN HIS VAL ASP GLY LYS ILE VAL GLY ASP VAL ASP PHE SEQRES 20 B 285 ALA ALA VAL LYS ASP LYS VAL ALA ALA ILE THR PRO VAL SEQRES 21 B 285 PRO GLY GLY VAL GLY PRO MET THR ILE THR GLU LEU LEU SEQRES 22 B 285 TYR ASN THR PHE GLN CYS ALA GLN GLU LEU ASN ARG HET PO4 A 501 5 HET IMD A 503 5 HET EDO A 506 4 HET EDO A 507 4 HET IMD B 502 5 HET EDO B 504 4 HET EDO B 505 4 HET ACT B 508 4 HETNAM PO4 PHOSPHATE ION HETNAM IMD IMIDAZOLE HETNAM EDO 1,2-ETHANEDIOL HETNAM ACT ACETATE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 3 PO4 O4 P 3- FORMUL 4 IMD 2(C3 H5 N2 1+) FORMUL 5 EDO 4(C2 H6 O2) FORMUL 10 ACT C2 H3 O2 1- FORMUL 11 HOH *437(H2 O) HELIX 1 1 ASP A 5 ALA A 29 1 25 HELIX 2 2 ASP A 42 VAL A 59 1 18 HELIX 3 3 THR A 73 ASN A 86 1 14 HELIX 4 4 ASN A 104 ILE A 112 1 9 HELIX 5 5 LYS A 113 ASP A 117 5 5 HELIX 6 6 HIS A 122 ARG A 132 1 11 HELIX 7 7 SER A 139 TYR A 152 1 14 HELIX 8 8 VAL A 170 ALA A 181 1 12 HELIX 9 9 ASP A 194 THR A 200 1 7 HELIX 10 10 THR A 216 VAL A 220 5 5 HELIX 11 11 ASP A 243 LYS A 248 1 6 HELIX 12 12 PRO A 263 LEU A 280 1 18 HELIX 13 13 ASP B 5 ALA B 29 1 25 HELIX 14 14 ASP B 42 VAL B 59 1 18 HELIX 15 15 THR B 73 ASN B 86 1 14 HELIX 16 16 ASN B 104 ILE B 112 1 9 HELIX 17 17 LYS B 113 ASP B 117 5 5 HELIX 18 18 HIS B 122 LEU B 131 1 10 HELIX 19 19 SER B 139 TYR B 152 1 14 HELIX 20 20 VAL B 170 ALA B 181 1 12 HELIX 21 21 ASP B 194 THR B 200 1 7 HELIX 22 22 THR B 216 VAL B 220 5 5 HELIX 23 23 ASP B 243 LYS B 248 1 6 HELIX 24 24 GLY B 260 ASN B 281 1 22 SHEET 1 A12 ILE A 2 LEU A 3 0 SHEET 2 A12 ALA A 253 ILE A 254 1 O ILE A 254 N ILE A 2 SHEET 3 A12 VAL A 225 ASP A 228 1 N VAL A 226 O ALA A 253 SHEET 4 A12 ILE A 204 VAL A 207 1 N VAL A 207 O ILE A 227 SHEET 5 A12 TYR A 160 VAL A 164 1 N VAL A 164 O ILE A 206 SHEET 6 A12 THR A 184 CYS A 188 1 O THR A 184 N ALA A 161 SHEET 7 A12 THR B 184 CYS B 188 -1 O VAL B 185 N THR A 187 SHEET 8 A12 TYR B 160 VAL B 164 1 N ALA B 161 O THR B 184 SHEET 9 A12 ILE B 204 VAL B 207 1 O ILE B 206 N VAL B 164 SHEET 10 A12 VAL B 225 ASP B 228 1 O ILE B 227 N LEU B 205 SHEET 11 A12 ALA B 253 ILE B 254 1 O ALA B 253 N VAL B 226 SHEET 12 A12 ILE B 2 LEU B 3 1 N ILE B 2 O ILE B 254 SHEET 1 B 3 ASP A 62 LEU A 68 0 SHEET 2 B 3 LYS A 33 VAL A 39 1 N ILE A 38 O LEU A 68 SHEET 3 B 3 ALA A 92 VAL A 95 1 O ALA A 92 N VAL A 35 SHEET 1 C 2 ASN A 232 VAL A 234 0 SHEET 2 C 2 LYS A 237 VAL A 239 -1 O VAL A 239 N ASN A 232 SHEET 1 D 3 ASP B 62 LEU B 68 0 SHEET 2 D 3 LYS B 33 VAL B 39 1 N ILE B 38 O LEU B 68 SHEET 3 D 3 ALA B 92 VAL B 95 1 O LEU B 94 N ILE B 37 SHEET 1 E 2 ASN B 232 VAL B 234 0 SHEET 2 E 2 LYS B 237 VAL B 239 -1 O VAL B 239 N ASN B 232 CISPEP 1 LEU A 97 PRO A 98 0 -3.87 CISPEP 2 VAL A 257 PRO A 258 0 -3.74 CISPEP 3 LEU B 97 PRO B 98 0 3.80 CISPEP 4 VAL B 257 PRO B 258 0 -3.88 SITE 1 AC1 5 GLY A 165 ALA A 166 HIS A 189 ARG A 190 SITE 2 AC1 5 HOH A 353 SITE 1 AC2 5 ILE B 231 PRO B 258 GLY B 259 HOH B 327 SITE 2 AC2 5 HOH B 438 SITE 1 AC3 4 PRO A 258 GLY A 259 PRO A 263 HOH A 317 SITE 1 AC4 7 LYS B 143 THR B 147 ARG B 150 GLU B 268 SITE 2 AC4 7 TYR B 271 HOH B 355 HOH B 389 SITE 1 AC5 9 ARG B 16 GLN B 20 ALA B 101 HIS B 102 SITE 2 AC5 9 ILE B 103 ASN B 104 TYR B 271 HOH B 332 SITE 3 AC5 9 HOH B 344 SITE 1 AC6 5 LYS A 143 GLU A 268 TYR A 271 HOH A 437 SITE 2 AC6 5 HOH A 461 SITE 1 AC7 5 LEU A 94 VAL A 95 ASP A 119 PHE A 121 SITE 2 AC7 5 HOH A 296 SITE 1 AC8 6 GLY B 165 ALA B 166 HIS B 189 ARG B 190 SITE 2 AC8 6 HOH B 406 HOH B 475 CRYST1 70.299 73.385 106.916 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014225 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013627 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009353 0.00000