HEADER HYDROLASE 09-DEC-09 3L0B TITLE CRYSTAL STRUCTURE OF SCP1 PHOSPHATASE D206A MUTANT PHOSPHORYL- TITLE 2 INTERMEDIATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CARBOXY-TERMINAL DOMAIN RNA POLYMERASE II POLYPEPTIDE A COMPND 3 SMALL PHOSPHATASE 1; COMPND 4 CHAIN: A, B; COMPND 5 FRAGMENT: C-TERMINAL DOMAIN; COMPND 6 SYNONYM: NUCLEAR LIM INTERACTOR-INTERACTING FACTOR 3, NLI-INTERACTING COMPND 7 FACTOR 3, NLI-IF; COMPND 8 EC: 3.1.3.16; COMPND 9 ENGINEERED: YES; COMPND 10 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CTDSP1, NIF3, NLIIF, SCP1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS HAD SUPERFAMILY, PHOSPHORYL-ASPARTATE INTERMEDIATE, SMALL C-TERMINAL KEYWDS 2 DOMAIN PHOSPHATASE, PROTEIN PHOSPHATASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.ZHANG,Y.ZHANG REVDAT 4 06-SEP-23 3L0B 1 REMARK REVDAT 3 13-OCT-21 3L0B 1 REMARK SEQADV LINK REVDAT 2 19-MAY-10 3L0B 1 JRNL REVDAT 1 23-MAR-10 3L0B 0 JRNL AUTH M.ZHANG,J.LIU,Y.KIM,J.E.DIXON,S.L.PFAFF,G.N.GILL,J.P.NOEL, JRNL AUTH 2 Y.ZHANG JRNL TITL STRUCTURAL AND FUNCTIONAL ANALYSIS OF THE PHOSPHORYL JRNL TITL 2 TRANSFER REACTION MEDIATED BY THE HUMAN SMALL C-TERMINAL JRNL TITL 3 DOMAIN PHOSPHATASE, SCP1. JRNL REF PROTEIN SCI. V. 19 974 2010 JRNL REFN ISSN 0961-8368 JRNL PMID 20222012 JRNL DOI 10.1002/PRO.375 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 64.68 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 91.2 REMARK 3 NUMBER OF REFLECTIONS : 20222 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1109 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.41 REMARK 3 REFLECTION IN BIN (WORKING SET) : 951 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 58.44 REMARK 3 BIN R VALUE (WORKING SET) : 0.2590 REMARK 3 BIN FREE R VALUE SET COUNT : 56 REMARK 3 BIN FREE R VALUE : 0.3450 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2926 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 18 REMARK 3 SOLVENT ATOMS : 96 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.36000 REMARK 3 B22 (A**2) : 1.14000 REMARK 3 B33 (A**2) : -0.06000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.94000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.287 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.238 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.158 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.685 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.941 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.907 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3014 ; 0.022 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4094 ; 1.982 ; 1.964 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 358 ; 6.872 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 153 ;37.376 ;23.464 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 489 ;18.729 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;22.458 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 454 ; 0.125 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2320 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1253 ; 0.206 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1997 ; 0.308 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 160 ; 0.171 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 2 ; 0.236 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 41 ; 0.185 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 5 ; 0.286 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1808 ; 1.037 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2936 ; 1.962 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1206 ; 3.043 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1158 ; 4.779 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3L0B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-JAN-10. REMARK 100 THE DEPOSITION ID IS D_1000056671. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-MAY-06 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21278 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 64.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.4 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07100 REMARK 200 FOR THE DATA SET : 16.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.43 REMARK 200 COMPLETENESS FOR SHELL (%) : 59.1 REMARK 200 DATA REDUNDANCY IN SHELL : 2.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.20400 REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 2GHQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.5M AMMONIUM SULFATE, 0.2M LITHIUM REMARK 280 SULFATE, 100MM HEPES, PH 7.0. CRYSTAL TRANSFERRED TO 100MM REMARK 280 SODIUM CITRATE, PH 5.5, 30% PEG8000, 20MM PNPP, AND 10MM REMARK 280 MAGNESIUM CHLORIDE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 62.33300 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.09350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 62.33300 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 39.09350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 73 REMARK 465 SER A 74 REMARK 465 HIS A 75 REMARK 465 GLY A 76 REMARK 465 GLY B 73 REMARK 465 SER B 74 REMARK 465 HIS B 75 REMARK 465 GLY B 76 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHD B 96 P OP1 OP2 OP3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 200 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 VAL A 213 CB - CA - C ANGL. DEV. = -11.7 DEGREES REMARK 500 ASP A 227 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG B 175 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ARG B 197 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG B 200 NE - CZ - NH2 ANGL. DEV. = -4.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 99 -1.49 63.97 REMARK 500 PHE A 177 -162.95 -121.98 REMARK 500 HIS A 215 55.05 -143.60 REMARK 500 PHE A 226 -58.74 -124.92 REMARK 500 ASP A 227 8.76 -158.19 REMARK 500 ARG A 255 77.61 100.80 REMARK 500 ALA B 85 -58.24 -26.47 REMARK 500 LEU B 97 -68.07 -94.86 REMARK 500 GLU B 99 -14.20 78.20 REMARK 500 THR B 100 -64.96 -97.17 REMARK 500 ASP B 121 74.53 43.49 REMARK 500 HIS B 215 55.95 -155.64 REMARK 500 PHE B 226 -60.52 -125.95 REMARK 500 ASP B 227 6.99 -155.59 REMARK 500 ARG B 255 155.08 72.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 257 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 1 O REMARK 620 2 HOH A 2 O 56.5 REMARK 620 3 PHD A 96 OP2 116.9 82.3 REMARK 620 4 ASP A 98 O 83.8 139.1 111.1 REMARK 620 5 ASN A 207 OD1 75.3 99.6 165.3 77.0 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 257 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PG A 300 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3L0C RELATED DB: PDB REMARK 900 RELATED ID: 1TA0 RELATED DB: PDB REMARK 900 SCP1 APO STRUCTURE REMARK 900 RELATED ID: 2GHQ RELATED DB: PDB REMARK 900 SCP1-CTD COMPLEX WITH PHOSPHORYLATION AT BOTH SER2 AND SER5 REMARK 900 RELATED ID: 2GHT RELATED DB: PDB REMARK 900 SCP1-CTD COMPLEX WITH PHOSPHORYLATION AT SER5 DBREF 3L0B A 77 256 UNP Q9GZU7 CTDS1_HUMAN 77 256 DBREF 3L0B B 77 256 UNP Q9GZU7 CTDS1_HUMAN 77 256 SEQADV 3L0B GLY A 73 UNP Q9GZU7 EXPRESSION TAG SEQADV 3L0B SER A 74 UNP Q9GZU7 EXPRESSION TAG SEQADV 3L0B HIS A 75 UNP Q9GZU7 EXPRESSION TAG SEQADV 3L0B GLY A 76 UNP Q9GZU7 EXPRESSION TAG SEQADV 3L0B ALA A 206 UNP Q9GZU7 ASP 206 ENGINEERED MUTATION SEQADV 3L0B GLY B 73 UNP Q9GZU7 EXPRESSION TAG SEQADV 3L0B SER B 74 UNP Q9GZU7 EXPRESSION TAG SEQADV 3L0B HIS B 75 UNP Q9GZU7 EXPRESSION TAG SEQADV 3L0B GLY B 76 UNP Q9GZU7 EXPRESSION TAG SEQADV 3L0B ALA B 206 UNP Q9GZU7 ASP 206 ENGINEERED MUTATION SEQRES 1 A 184 GLY SER HIS GLY GLN TYR LEU LEU PRO GLU ALA LYS ALA SEQRES 2 A 184 GLN ASP SER ASP LYS ILE CYS VAL VAL ILE PHD LEU ASP SEQRES 3 A 184 GLU THR LEU VAL HIS SER SER PHE LYS PRO VAL ASN ASN SEQRES 4 A 184 ALA ASP PHE ILE ILE PRO VAL GLU ILE ASP GLY VAL VAL SEQRES 5 A 184 HIS GLN VAL TYR VAL LEU LYS ARG PRO HIS VAL ASP GLU SEQRES 6 A 184 PHE LEU GLN ARG MET GLY GLU LEU PHE GLU CYS VAL LEU SEQRES 7 A 184 PHE THR ALA SER LEU ALA LYS TYR ALA ASP PRO VAL ALA SEQRES 8 A 184 ASP LEU LEU ASP LYS TRP GLY ALA PHE ARG ALA ARG LEU SEQRES 9 A 184 PHE ARG GLU SER CYS VAL PHE HIS ARG GLY ASN TYR VAL SEQRES 10 A 184 LYS ASP LEU SER ARG LEU GLY ARG ASP LEU ARG ARG VAL SEQRES 11 A 184 LEU ILE LEU ALA ASN SER PRO ALA SER TYR VAL PHE HIS SEQRES 12 A 184 PRO ASP ASN ALA VAL PRO VAL ALA SER TRP PHE ASP ASN SEQRES 13 A 184 MET SER ASP THR GLU LEU HIS ASP LEU LEU PRO PHE PHE SEQRES 14 A 184 GLU GLN LEU SER ARG VAL ASP ASP VAL TYR SER VAL LEU SEQRES 15 A 184 ARG GLN SEQRES 1 B 184 GLY SER HIS GLY GLN TYR LEU LEU PRO GLU ALA LYS ALA SEQRES 2 B 184 GLN ASP SER ASP LYS ILE CYS VAL VAL ILE PHD LEU ASP SEQRES 3 B 184 GLU THR LEU VAL HIS SER SER PHE LYS PRO VAL ASN ASN SEQRES 4 B 184 ALA ASP PHE ILE ILE PRO VAL GLU ILE ASP GLY VAL VAL SEQRES 5 B 184 HIS GLN VAL TYR VAL LEU LYS ARG PRO HIS VAL ASP GLU SEQRES 6 B 184 PHE LEU GLN ARG MET GLY GLU LEU PHE GLU CYS VAL LEU SEQRES 7 B 184 PHE THR ALA SER LEU ALA LYS TYR ALA ASP PRO VAL ALA SEQRES 8 B 184 ASP LEU LEU ASP LYS TRP GLY ALA PHE ARG ALA ARG LEU SEQRES 9 B 184 PHE ARG GLU SER CYS VAL PHE HIS ARG GLY ASN TYR VAL SEQRES 10 B 184 LYS ASP LEU SER ARG LEU GLY ARG ASP LEU ARG ARG VAL SEQRES 11 B 184 LEU ILE LEU ALA ASN SER PRO ALA SER TYR VAL PHE HIS SEQRES 12 B 184 PRO ASP ASN ALA VAL PRO VAL ALA SER TRP PHE ASP ASN SEQRES 13 B 184 MET SER ASP THR GLU LEU HIS ASP LEU LEU PRO PHE PHE SEQRES 14 B 184 GLU GLN LEU SER ARG VAL ASP ASP VAL TYR SER VAL LEU SEQRES 15 B 184 ARG GLN MODRES 3L0B PHD A 96 ASP ASPARTYL PHOSPHATE MODRES 3L0B PHD B 96 ASP ASPARTYL PHOSPHATE HET PHD A 96 12 HET PHD B 96 8 HET MG A 257 1 HET 1PG A 300 17 HETNAM PHD ASPARTYL PHOSPHATE HETNAM MG MAGNESIUM ION HETNAM 1PG 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)- HETNAM 2 1PG ETHANOL FORMUL 1 PHD 2(C4 H8 N O7 P) FORMUL 3 MG MG 2+ FORMUL 4 1PG C11 H24 O6 FORMUL 5 HOH *96(H2 O) HELIX 1 1 HIS A 134 LEU A 145 1 12 HELIX 2 2 LEU A 155 ASP A 167 1 13 HELIX 3 3 PHE A 177 CYS A 181 5 5 HELIX 4 4 ASP A 191 LEU A 195 5 5 HELIX 5 5 ASP A 198 ARG A 200 5 3 HELIX 6 6 SER A 208 VAL A 213 5 6 HELIX 7 7 HIS A 215 ASP A 217 5 3 HELIX 8 8 THR A 232 SER A 245 1 14 HELIX 9 9 VAL A 250 ARG A 255 1 6 HELIX 10 10 LYS B 84 SER B 88 5 5 HELIX 11 11 HIS B 134 PHE B 146 1 13 HELIX 12 12 LEU B 155 ASP B 167 1 13 HELIX 13 13 PHE B 177 CYS B 181 5 5 HELIX 14 14 ASP B 191 LEU B 195 5 5 HELIX 15 15 ASP B 198 ARG B 200 5 3 HELIX 16 16 SER B 208 VAL B 213 5 6 HELIX 17 17 HIS B 215 ASP B 217 5 3 HELIX 18 18 LEU B 237 SER B 245 1 9 HELIX 19 19 VAL B 250 ARG B 255 1 6 SHEET 1 A 5 PHE A 172 LEU A 176 0 SHEET 2 A 5 PHE A 146 PHE A 151 1 N CYS A 148 O ARG A 173 SHEET 3 A 5 ILE A 91 ILE A 95 1 N ILE A 95 O VAL A 149 SHEET 4 A 5 VAL A 202 ALA A 206 1 O LEU A 203 N VAL A 94 SHEET 5 A 5 ALA A 219 PRO A 221 1 O VAL A 220 N ILE A 204 SHEET 1 B 3 VAL A 102 SER A 105 0 SHEET 2 B 3 VAL A 123 LYS A 131 -1 O LEU A 130 N HIS A 103 SHEET 3 B 3 PHE A 114 ILE A 120 -1 N VAL A 118 O HIS A 125 SHEET 1 C 2 VAL A 182 HIS A 184 0 SHEET 2 C 2 ASN A 187 VAL A 189 -1 O ASN A 187 N HIS A 184 SHEET 1 D 5 PHE B 172 LEU B 176 0 SHEET 2 D 5 GLU B 147 PHE B 151 1 N LEU B 150 O LEU B 176 SHEET 3 D 5 CYS B 92 ILE B 95 1 N ILE B 95 O VAL B 149 SHEET 4 D 5 VAL B 202 ALA B 206 1 O LEU B 203 N VAL B 94 SHEET 5 D 5 ALA B 219 PRO B 221 1 O VAL B 220 N ILE B 204 SHEET 1 E 3 VAL B 102 SER B 105 0 SHEET 2 E 3 VAL B 123 LYS B 131 -1 O TYR B 128 N SER B 105 SHEET 3 E 3 PHE B 114 ILE B 120 -1 N VAL B 118 O HIS B 125 SHEET 1 F 2 VAL B 182 HIS B 184 0 SHEET 2 F 2 ASN B 187 VAL B 189 -1 O VAL B 189 N VAL B 182 LINK C ILE A 95 N PHD A 96 1555 1555 1.33 LINK C PHD A 96 N LEU A 97 1555 1555 1.31 LINK C ILE B 95 N PHD B 96 1555 1555 1.34 LINK C PHD B 96 N LEU B 97 1555 1555 1.32 LINK O HOH A 1 MG MG A 257 1555 1555 2.75 LINK O HOH A 2 MG MG A 257 1555 1555 2.07 LINK OP2 PHD A 96 MG MG A 257 1555 1555 1.77 LINK O ASP A 98 MG MG A 257 1555 1555 2.16 LINK OD1 ASN A 207 MG MG A 257 1555 1555 2.68 SITE 1 AC1 5 HOH A 1 HOH A 2 PHD A 96 ASP A 98 SITE 2 AC1 5 ASN A 207 SITE 1 AC2 6 HOH A 23 SER A 105 PHE A 106 TYR A 158 SITE 2 AC2 6 ARG A 178 GLY A 186 CRYST1 124.666 78.187 62.585 90.00 112.34 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008021 0.000000 0.003296 0.00000 SCALE2 0.000000 0.012790 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017275 0.00000