data_3L1B # _entry.id 3L1B # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3L1B pdb_00003l1b 10.2210/pdb3l1b/pdb RCSB RCSB056707 ? ? WWPDB D_1000056707 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-03-02 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2024-02-21 4 'Structure model' 1 3 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' struct_ref_seq_dif 5 3 'Structure model' struct_site 6 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3L1B _pdbx_database_status.recvd_initial_deposition_date 2009-12-11 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1OSH _pdbx_database_related.details 'A Chemical, Genetic, and Structural Analysis of the nuclear bile acid receptor FXR' _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Xu, W.' 1 'Lundquist, J.T.' 2 # _citation.id primary _citation.title ;Improvement of Physiochemical Properties of the Tetrahydroazepinoindole Series of Farnesoid X Receptor (FXR) Agonists: Beneficial Modulation of Lipids in Primates. ; _citation.journal_abbrev J.Med.Chem. _citation.journal_volume 53 _citation.page_first 1774 _citation.page_last 1787 _citation.year 2010 _citation.journal_id_ASTM JMCMAR _citation.country US _citation.journal_id_ISSN 0022-2623 _citation.journal_id_CSD 0151 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20095622 _citation.pdbx_database_id_DOI 10.1021/jm901650u # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lundquist, J.T.' 1 ? primary 'Harnish, D.C.' 2 ? primary 'Kim, C.Y.' 3 ? primary 'Mehlmann, J.F.' 4 ? primary 'Unwalla, R.J.' 5 ? primary 'Phipps, K.M.' 6 ? primary 'Crawley, M.L.' 7 ? primary 'Commons, T.' 8 ? primary 'Green, D.M.' 9 ? primary 'Xu, W.' 10 ? primary 'Hum, W.T.' 11 ? primary 'Eta, J.E.' 12 ? primary 'Feingold, I.' 13 ? primary 'Patel, V.' 14 ? primary 'Evans, M.J.' 15 ? primary 'Lai, K.' 16 ? primary 'Borges-Marcucci, L.' 17 ? primary 'Mahaney, P.E.' 18 ? primary 'Wrobel, J.E.' 19 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Farnesoid X receptor' 27142.119 1 ? ? 'Ligand-binding domain, residues 248-476' ? 2 non-polymer syn ;1-methylethyl 8-fluoro-1,1-dimethyl-3-{[4-(3-morpholin-4-ylpropoxy)phenyl]carbonyl}-1,2,3,6-tetrahydroazepino[4,5-b]indole-5-carboxylate ; 563.660 1 ? ? ? ? 3 water nat water 18.015 30 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'NR1H4 protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHGELTPDQQTLLHFIMDSYNKQRMPQEITNKILKEEFSAEENFLILTEMATNHVQVLVEFTKKLPGFQTLDHEDQIAL LKGSAVEAMFLRSAEIFNKKLPSGHSDLLEERIRNSGISDEYITPMFSFYKSIGELKMTQEEYALLTAIVILSPDRQYIK DREAVEKLQEPLLDVLQKLCKIHQPENPQHFACLLGRLTELRTFNHHHAEMLMSWRVNDHKFTPLLCEIWDVQ ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHGELTPDQQTLLHFIMDSYNKQRMPQEITNKILKEEFSAEENFLILTEMATNHVQVLVEFTKKLPGFQTLDHEDQIAL LKGSAVEAMFLRSAEIFNKKLPSGHSDLLEERIRNSGISDEYITPMFSFYKSIGELKMTQEEYALLTAIVILSPDRQYIK DREAVEKLQEPLLDVLQKLCKIHQPENPQHFACLLGRLTELRTFNHHHAEMLMSWRVNDHKFTPLLCEIWDVQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;1-methylethyl 8-fluoro-1,1-dimethyl-3-{[4-(3-morpholin-4-ylpropoxy)phenyl]carbonyl}-1,2,3,6-tetrahydroazepino[4,5-b]indole-5-carboxylate ; 635 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 GLY n 1 5 GLU n 1 6 LEU n 1 7 THR n 1 8 PRO n 1 9 ASP n 1 10 GLN n 1 11 GLN n 1 12 THR n 1 13 LEU n 1 14 LEU n 1 15 HIS n 1 16 PHE n 1 17 ILE n 1 18 MET n 1 19 ASP n 1 20 SER n 1 21 TYR n 1 22 ASN n 1 23 LYS n 1 24 GLN n 1 25 ARG n 1 26 MET n 1 27 PRO n 1 28 GLN n 1 29 GLU n 1 30 ILE n 1 31 THR n 1 32 ASN n 1 33 LYS n 1 34 ILE n 1 35 LEU n 1 36 LYS n 1 37 GLU n 1 38 GLU n 1 39 PHE n 1 40 SER n 1 41 ALA n 1 42 GLU n 1 43 GLU n 1 44 ASN n 1 45 PHE n 1 46 LEU n 1 47 ILE n 1 48 LEU n 1 49 THR n 1 50 GLU n 1 51 MET n 1 52 ALA n 1 53 THR n 1 54 ASN n 1 55 HIS n 1 56 VAL n 1 57 GLN n 1 58 VAL n 1 59 LEU n 1 60 VAL n 1 61 GLU n 1 62 PHE n 1 63 THR n 1 64 LYS n 1 65 LYS n 1 66 LEU n 1 67 PRO n 1 68 GLY n 1 69 PHE n 1 70 GLN n 1 71 THR n 1 72 LEU n 1 73 ASP n 1 74 HIS n 1 75 GLU n 1 76 ASP n 1 77 GLN n 1 78 ILE n 1 79 ALA n 1 80 LEU n 1 81 LEU n 1 82 LYS n 1 83 GLY n 1 84 SER n 1 85 ALA n 1 86 VAL n 1 87 GLU n 1 88 ALA n 1 89 MET n 1 90 PHE n 1 91 LEU n 1 92 ARG n 1 93 SER n 1 94 ALA n 1 95 GLU n 1 96 ILE n 1 97 PHE n 1 98 ASN n 1 99 LYS n 1 100 LYS n 1 101 LEU n 1 102 PRO n 1 103 SER n 1 104 GLY n 1 105 HIS n 1 106 SER n 1 107 ASP n 1 108 LEU n 1 109 LEU n 1 110 GLU n 1 111 GLU n 1 112 ARG n 1 113 ILE n 1 114 ARG n 1 115 ASN n 1 116 SER n 1 117 GLY n 1 118 ILE n 1 119 SER n 1 120 ASP n 1 121 GLU n 1 122 TYR n 1 123 ILE n 1 124 THR n 1 125 PRO n 1 126 MET n 1 127 PHE n 1 128 SER n 1 129 PHE n 1 130 TYR n 1 131 LYS n 1 132 SER n 1 133 ILE n 1 134 GLY n 1 135 GLU n 1 136 LEU n 1 137 LYS n 1 138 MET n 1 139 THR n 1 140 GLN n 1 141 GLU n 1 142 GLU n 1 143 TYR n 1 144 ALA n 1 145 LEU n 1 146 LEU n 1 147 THR n 1 148 ALA n 1 149 ILE n 1 150 VAL n 1 151 ILE n 1 152 LEU n 1 153 SER n 1 154 PRO n 1 155 ASP n 1 156 ARG n 1 157 GLN n 1 158 TYR n 1 159 ILE n 1 160 LYS n 1 161 ASP n 1 162 ARG n 1 163 GLU n 1 164 ALA n 1 165 VAL n 1 166 GLU n 1 167 LYS n 1 168 LEU n 1 169 GLN n 1 170 GLU n 1 171 PRO n 1 172 LEU n 1 173 LEU n 1 174 ASP n 1 175 VAL n 1 176 LEU n 1 177 GLN n 1 178 LYS n 1 179 LEU n 1 180 CYS n 1 181 LYS n 1 182 ILE n 1 183 HIS n 1 184 GLN n 1 185 PRO n 1 186 GLU n 1 187 ASN n 1 188 PRO n 1 189 GLN n 1 190 HIS n 1 191 PHE n 1 192 ALA n 1 193 CYS n 1 194 LEU n 1 195 LEU n 1 196 GLY n 1 197 ARG n 1 198 LEU n 1 199 THR n 1 200 GLU n 1 201 LEU n 1 202 ARG n 1 203 THR n 1 204 PHE n 1 205 ASN n 1 206 HIS n 1 207 HIS n 1 208 HIS n 1 209 ALA n 1 210 GLU n 1 211 MET n 1 212 LEU n 1 213 MET n 1 214 SER n 1 215 TRP n 1 216 ARG n 1 217 VAL n 1 218 ASN n 1 219 ASP n 1 220 HIS n 1 221 LYS n 1 222 PHE n 1 223 THR n 1 224 PRO n 1 225 LEU n 1 226 LEU n 1 227 CYS n 1 228 GLU n 1 229 ILE n 1 230 TRP n 1 231 ASP n 1 232 VAL n 1 233 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene NR1H4 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 635 non-polymer . ;1-methylethyl 8-fluoro-1,1-dimethyl-3-{[4-(3-morpholin-4-ylpropoxy)phenyl]carbonyl}-1,2,3,6-tetrahydroazepino[4,5-b]indole-5-carboxylate ; ? 'C32 H38 F N3 O5' 563.660 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 244 ? ? ? A . n A 1 2 SER 2 245 245 SER SER A . n A 1 3 HIS 3 246 246 HIS HIS A . n A 1 4 GLY 4 247 247 GLY GLY A . n A 1 5 GLU 5 248 248 GLU GLU A . n A 1 6 LEU 6 249 249 LEU LEU A . n A 1 7 THR 7 250 250 THR THR A . n A 1 8 PRO 8 251 251 PRO PRO A . n A 1 9 ASP 9 252 252 ASP ASP A . n A 1 10 GLN 10 253 253 GLN GLN A . n A 1 11 GLN 11 254 254 GLN GLN A . n A 1 12 THR 12 255 255 THR THR A . n A 1 13 LEU 13 256 256 LEU LEU A . n A 1 14 LEU 14 257 257 LEU LEU A . n A 1 15 HIS 15 258 258 HIS HIS A . n A 1 16 PHE 16 259 259 PHE PHE A . n A 1 17 ILE 17 260 260 ILE ILE A . n A 1 18 MET 18 261 261 MET MET A . n A 1 19 ASP 19 262 262 ASP ASP A . n A 1 20 SER 20 263 263 SER SER A . n A 1 21 TYR 21 264 264 TYR TYR A . n A 1 22 ASN 22 265 265 ASN ASN A . n A 1 23 LYS 23 266 266 LYS LYS A . n A 1 24 GLN 24 267 267 GLN GLN A . n A 1 25 ARG 25 268 ? ? ? A . n A 1 26 MET 26 269 ? ? ? A . n A 1 27 PRO 27 270 ? ? ? A . n A 1 28 GLN 28 271 ? ? ? A . n A 1 29 GLU 29 272 ? ? ? A . n A 1 30 ILE 30 273 ? ? ? A . n A 1 31 THR 31 274 ? ? ? A . n A 1 32 ASN 32 275 ? ? ? A . n A 1 33 LYS 33 276 ? ? ? A . n A 1 34 ILE 34 277 ? ? ? A . n A 1 35 LEU 35 278 ? ? ? A . n A 1 36 LYS 36 279 ? ? ? A . n A 1 37 GLU 37 280 ? ? ? A . n A 1 38 GLU 38 281 ? ? ? A . n A 1 39 PHE 39 282 ? ? ? A . n A 1 40 SER 40 283 283 SER SER A . n A 1 41 ALA 41 284 284 ALA ALA A . n A 1 42 GLU 42 285 285 GLU GLU A . n A 1 43 GLU 43 286 286 GLU GLU A . n A 1 44 ASN 44 287 287 ASN ASN A . n A 1 45 PHE 45 288 288 PHE PHE A . n A 1 46 LEU 46 289 289 LEU LEU A . n A 1 47 ILE 47 290 290 ILE ILE A . n A 1 48 LEU 48 291 291 LEU LEU A . n A 1 49 THR 49 292 292 THR THR A . n A 1 50 GLU 50 293 293 GLU GLU A . n A 1 51 MET 51 294 294 MET MET A . n A 1 52 ALA 52 295 295 ALA ALA A . n A 1 53 THR 53 296 296 THR THR A . n A 1 54 ASN 54 297 297 ASN ASN A . n A 1 55 HIS 55 298 298 HIS HIS A . n A 1 56 VAL 56 299 299 VAL VAL A . n A 1 57 GLN 57 300 300 GLN GLN A . n A 1 58 VAL 58 301 301 VAL VAL A . n A 1 59 LEU 59 302 302 LEU LEU A . n A 1 60 VAL 60 303 303 VAL VAL A . n A 1 61 GLU 61 304 304 GLU GLU A . n A 1 62 PHE 62 305 305 PHE PHE A . n A 1 63 THR 63 306 306 THR THR A . n A 1 64 LYS 64 307 307 LYS LYS A . n A 1 65 LYS 65 308 308 LYS LYS A . n A 1 66 LEU 66 309 309 LEU LEU A . n A 1 67 PRO 67 310 310 PRO PRO A . n A 1 68 GLY 68 311 311 GLY GLY A . n A 1 69 PHE 69 312 312 PHE PHE A . n A 1 70 GLN 70 313 313 GLN GLN A . n A 1 71 THR 71 314 314 THR THR A . n A 1 72 LEU 72 315 315 LEU LEU A . n A 1 73 ASP 73 316 316 ASP ASP A . n A 1 74 HIS 74 317 317 HIS HIS A . n A 1 75 GLU 75 318 318 GLU GLU A . n A 1 76 ASP 76 319 319 ASP ASP A . n A 1 77 GLN 77 320 320 GLN GLN A . n A 1 78 ILE 78 321 321 ILE ILE A . n A 1 79 ALA 79 322 322 ALA ALA A . n A 1 80 LEU 80 323 323 LEU LEU A . n A 1 81 LEU 81 324 324 LEU LEU A . n A 1 82 LYS 82 325 325 LYS LYS A . n A 1 83 GLY 83 326 326 GLY GLY A . n A 1 84 SER 84 327 327 SER SER A . n A 1 85 ALA 85 328 328 ALA ALA A . n A 1 86 VAL 86 329 329 VAL VAL A . n A 1 87 GLU 87 330 330 GLU GLU A . n A 1 88 ALA 88 331 331 ALA ALA A . n A 1 89 MET 89 332 332 MET MET A . n A 1 90 PHE 90 333 333 PHE PHE A . n A 1 91 LEU 91 334 334 LEU LEU A . n A 1 92 ARG 92 335 335 ARG ARG A . n A 1 93 SER 93 336 336 SER SER A . n A 1 94 ALA 94 337 337 ALA ALA A . n A 1 95 GLU 95 338 338 GLU GLU A . n A 1 96 ILE 96 339 339 ILE ILE A . n A 1 97 PHE 97 340 340 PHE PHE A . n A 1 98 ASN 98 341 341 ASN ASN A . n A 1 99 LYS 99 342 342 LYS LYS A . n A 1 100 LYS 100 343 343 LYS LYS A . n A 1 101 LEU 101 344 344 LEU LEU A . n A 1 102 PRO 102 345 345 PRO PRO A . n A 1 103 SER 103 346 346 SER SER A . n A 1 104 GLY 104 347 347 GLY GLY A . n A 1 105 HIS 105 348 348 HIS HIS A . n A 1 106 SER 106 349 349 SER SER A . n A 1 107 ASP 107 350 350 ASP ASP A . n A 1 108 LEU 108 351 351 LEU LEU A . n A 1 109 LEU 109 352 352 LEU LEU A . n A 1 110 GLU 110 353 353 GLU GLU A . n A 1 111 GLU 111 354 354 GLU GLU A . n A 1 112 ARG 112 355 355 ARG ARG A . n A 1 113 ILE 113 356 356 ILE ILE A . n A 1 114 ARG 114 357 357 ARG ARG A . n A 1 115 ASN 115 358 358 ASN ASN A . n A 1 116 SER 116 359 359 SER SER A . n A 1 117 GLY 117 360 360 GLY GLY A . n A 1 118 ILE 118 361 361 ILE ILE A . n A 1 119 SER 119 362 362 SER SER A . n A 1 120 ASP 120 363 363 ASP ASP A . n A 1 121 GLU 121 364 364 GLU GLU A . n A 1 122 TYR 122 365 365 TYR TYR A . n A 1 123 ILE 123 366 366 ILE ILE A . n A 1 124 THR 124 367 367 THR THR A . n A 1 125 PRO 125 368 368 PRO PRO A . n A 1 126 MET 126 369 369 MET MET A . n A 1 127 PHE 127 370 370 PHE PHE A . n A 1 128 SER 128 371 371 SER SER A . n A 1 129 PHE 129 372 372 PHE PHE A . n A 1 130 TYR 130 373 373 TYR TYR A . n A 1 131 LYS 131 374 374 LYS LYS A . n A 1 132 SER 132 375 375 SER SER A . n A 1 133 ILE 133 376 376 ILE ILE A . n A 1 134 GLY 134 377 377 GLY GLY A . n A 1 135 GLU 135 378 378 GLU GLU A . n A 1 136 LEU 136 379 379 LEU LEU A . n A 1 137 LYS 137 380 380 LYS LYS A . n A 1 138 MET 138 381 381 MET MET A . n A 1 139 THR 139 382 382 THR THR A . n A 1 140 GLN 140 383 383 GLN GLN A . n A 1 141 GLU 141 384 384 GLU GLU A . n A 1 142 GLU 142 385 385 GLU GLU A . n A 1 143 TYR 143 386 386 TYR TYR A . n A 1 144 ALA 144 387 387 ALA ALA A . n A 1 145 LEU 145 388 388 LEU LEU A . n A 1 146 LEU 146 389 389 LEU LEU A . n A 1 147 THR 147 390 390 THR THR A . n A 1 148 ALA 148 391 391 ALA ALA A . n A 1 149 ILE 149 392 392 ILE ILE A . n A 1 150 VAL 150 393 393 VAL VAL A . n A 1 151 ILE 151 394 394 ILE ILE A . n A 1 152 LEU 152 395 395 LEU LEU A . n A 1 153 SER 153 396 396 SER SER A . n A 1 154 PRO 154 397 397 PRO PRO A . n A 1 155 ASP 155 398 398 ASP ASP A . n A 1 156 ARG 156 399 399 ARG ARG A . n A 1 157 GLN 157 400 400 GLN GLN A . n A 1 158 TYR 158 401 401 TYR TYR A . n A 1 159 ILE 159 402 402 ILE ILE A . n A 1 160 LYS 160 403 403 LYS LYS A . n A 1 161 ASP 161 404 404 ASP ASP A . n A 1 162 ARG 162 405 405 ARG ARG A . n A 1 163 GLU 163 406 406 GLU GLU A . n A 1 164 ALA 164 407 407 ALA ALA A . n A 1 165 VAL 165 408 408 VAL VAL A . n A 1 166 GLU 166 409 409 GLU GLU A . n A 1 167 LYS 167 410 410 LYS LYS A . n A 1 168 LEU 168 411 411 LEU LEU A . n A 1 169 GLN 169 412 412 GLN GLN A . n A 1 170 GLU 170 413 413 GLU GLU A . n A 1 171 PRO 171 414 414 PRO PRO A . n A 1 172 LEU 172 415 415 LEU LEU A . n A 1 173 LEU 173 416 416 LEU LEU A . n A 1 174 ASP 174 417 417 ASP ASP A . n A 1 175 VAL 175 418 418 VAL VAL A . n A 1 176 LEU 176 419 419 LEU LEU A . n A 1 177 GLN 177 420 420 GLN GLN A . n A 1 178 LYS 178 421 421 LYS LYS A . n A 1 179 LEU 179 422 422 LEU LEU A . n A 1 180 CYS 180 423 423 CYS CYS A . n A 1 181 LYS 181 424 424 LYS LYS A . n A 1 182 ILE 182 425 425 ILE ILE A . n A 1 183 HIS 183 426 426 HIS HIS A . n A 1 184 GLN 184 427 427 GLN GLN A . n A 1 185 PRO 185 428 428 PRO PRO A . n A 1 186 GLU 186 429 429 GLU GLU A . n A 1 187 ASN 187 430 430 ASN ASN A . n A 1 188 PRO 188 431 431 PRO PRO A . n A 1 189 GLN 189 432 432 GLN GLN A . n A 1 190 HIS 190 433 433 HIS HIS A . n A 1 191 PHE 191 434 434 PHE PHE A . n A 1 192 ALA 192 435 435 ALA ALA A . n A 1 193 CYS 193 436 436 CYS CYS A . n A 1 194 LEU 194 437 437 LEU LEU A . n A 1 195 LEU 195 438 438 LEU LEU A . n A 1 196 GLY 196 439 439 GLY GLY A . n A 1 197 ARG 197 440 440 ARG ARG A . n A 1 198 LEU 198 441 441 LEU LEU A . n A 1 199 THR 199 442 442 THR THR A . n A 1 200 GLU 200 443 443 GLU GLU A . n A 1 201 LEU 201 444 444 LEU LEU A . n A 1 202 ARG 202 445 445 ARG ARG A . n A 1 203 THR 203 446 446 THR THR A . n A 1 204 PHE 204 447 447 PHE PHE A . n A 1 205 ASN 205 448 448 ASN ASN A . n A 1 206 HIS 206 449 449 HIS HIS A . n A 1 207 HIS 207 450 450 HIS HIS A . n A 1 208 HIS 208 451 451 HIS HIS A . n A 1 209 ALA 209 452 452 ALA ALA A . n A 1 210 GLU 210 453 453 GLU GLU A . n A 1 211 MET 211 454 454 MET MET A . n A 1 212 LEU 212 455 455 LEU LEU A . n A 1 213 MET 213 456 456 MET MET A . n A 1 214 SER 214 457 457 SER SER A . n A 1 215 TRP 215 458 458 TRP TRP A . n A 1 216 ARG 216 459 459 ARG ARG A . n A 1 217 VAL 217 460 460 VAL VAL A . n A 1 218 ASN 218 461 461 ASN ASN A . n A 1 219 ASP 219 462 462 ASP ASP A . n A 1 220 HIS 220 463 463 HIS HIS A . n A 1 221 LYS 221 464 464 LYS LYS A . n A 1 222 PHE 222 465 465 PHE PHE A . n A 1 223 THR 223 466 466 THR THR A . n A 1 224 PRO 224 467 467 PRO PRO A . n A 1 225 LEU 225 468 468 LEU LEU A . n A 1 226 LEU 226 469 469 LEU LEU A . n A 1 227 CYS 227 470 470 CYS CYS A . n A 1 228 GLU 228 471 471 GLU GLU A . n A 1 229 ILE 229 472 472 ILE ILE A . n A 1 230 TRP 230 473 473 TRP TRP A . n A 1 231 ASP 231 474 474 ASP ASP A . n A 1 232 VAL 232 475 475 VAL VAL A . n A 1 233 GLN 233 476 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 635 1 1 1 635 635 A . C 3 HOH 1 2 2 HOH HOH A . C 3 HOH 2 4 4 HOH HOH A . C 3 HOH 3 5 5 HOH HOH A . C 3 HOH 4 6 6 HOH HOH A . C 3 HOH 5 7 7 HOH HOH A . C 3 HOH 6 8 8 HOH HOH A . C 3 HOH 7 9 9 HOH HOH A . C 3 HOH 8 10 10 HOH HOH A . C 3 HOH 9 11 11 HOH HOH A . C 3 HOH 10 12 12 HOH HOH A . C 3 HOH 11 14 14 HOH HOH A . C 3 HOH 12 16 16 HOH HOH A . C 3 HOH 13 17 17 HOH HOH A . C 3 HOH 14 19 19 HOH HOH A . C 3 HOH 15 20 20 HOH HOH A . C 3 HOH 16 21 21 HOH HOH A . C 3 HOH 17 23 23 HOH HOH A . C 3 HOH 18 24 24 HOH HOH A . C 3 HOH 19 26 26 HOH HOH A . C 3 HOH 20 30 30 HOH HOH A . C 3 HOH 21 33 33 HOH HOH A . C 3 HOH 22 35 35 HOH HOH A . C 3 HOH 23 36 36 HOH HOH A . C 3 HOH 24 37 37 HOH HOH A . C 3 HOH 25 38 38 HOH HOH A . C 3 HOH 26 39 39 HOH HOH A . C 3 HOH 27 40 40 HOH HOH A . C 3 HOH 28 41 41 HOH HOH A . C 3 HOH 29 42 42 HOH HOH A . C 3 HOH 30 477 1 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal AMoRE phasing . ? 1 PHENIX refinement '(phenix.refine)' ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # _cell.entry_id 3L1B _cell.length_a 33.845 _cell.length_b 55.365 _cell.length_c 118.569 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3L1B _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3L1B _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.05 _exptl_crystal.density_percent_sol 39.89 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '0.1mM Hepes, 27%PEG3350, 400mM MgCl2, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU SATURN 92' _diffrn_detector.pdbx_collection_date 2008-05-14 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'YALE MIRRORS' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU FR-E+ SUPERBRIGHT' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 3L1B _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.9 _reflns.number_obs 17343 _reflns.number_all 17343 _reflns.percent_possible_obs 93.9 _reflns.pdbx_Rmerge_I_obs 0.038 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.9 _reflns_shell.d_res_low 1.97 _reflns_shell.percent_possible_all 87.9 _reflns_shell.Rmerge_I_obs 0.435 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.1 _reflns_shell.pdbx_redundancy 3.3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1569 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3L1B _refine.ls_number_reflns_obs 17343 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.33 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 32.168 _refine.ls_d_res_high 1.9 _refine.ls_percent_reflns_obs 93.29 _refine.ls_R_factor_obs 0.2471 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2458 _refine.ls_R_factor_R_free 0.2705 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.09 _refine.ls_number_reflns_R_free 882 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.369 _refine.solvent_model_param_bsol 57.492 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'in-house FXR ligand-binding domain structure' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.33 _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1762 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 41 _refine_hist.number_atoms_solvent 30 _refine_hist.number_atoms_total 1833 _refine_hist.d_res_high 1.9 _refine_hist.d_res_low 32.168 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.006 ? ? 1846 'X-RAY DIFFRACTION' ? f_angle_d 0.908 ? ? 2499 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 16.921 ? ? 690 'X-RAY DIFFRACTION' ? f_chiral_restr 0.058 ? ? 273 'X-RAY DIFFRACTION' ? f_plane_restr 0.004 ? ? 317 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.9000 2.0078 2433 0.3214 85.00 0.3834 . . 126 . . . . 'X-RAY DIFFRACTION' . 2.0078 2.1628 2687 0.2777 93.00 0.3114 . . 147 . . . . 'X-RAY DIFFRACTION' . 2.1628 2.3803 2741 0.2617 94.00 0.3461 . . 145 . . . . 'X-RAY DIFFRACTION' . 2.3803 2.7246 2748 0.2614 95.00 0.3266 . . 159 . . . . 'X-RAY DIFFRACTION' . 2.7246 3.4321 2783 0.2524 94.00 0.2622 . . 162 . . . . 'X-RAY DIFFRACTION' . 3.4321 32.1723 3069 0.2236 98.00 0.2268 . . 143 . . . . 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3L1B _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3L1B _struct.title 'Complex Structure of FXR Ligand-binding domain with a tetrahydroazepinoindole compound' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3L1B _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text 'Nuclear receptor, FXR agonist, FXR ligand-binding domain, Nucleus, Receptor, Transcription regulation, TRANSCRIPTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code B7ZM06_HUMAN _struct_ref.pdbx_db_accession B7ZM06 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ELTPDQQTLLHFIMDSYNKQRMPQEITNKILKEEFSAEENFLILTEMATNHVQVLVEFTKKLPGFQTLDHEDQIALLKGS AVEAMFLRSAEIFNKKLPSGHSDLLEERIRNSGISDEYITPMFSFYKSIGELKMTQEEYALLTAIVILSPDRQYIKDREA VEKLQEPLLDVLQKLCKIHQPENPQHFACLLGRLTELRTFNHHHAEMLMSWRVNDHKFTPLLCEIWDVQ ; _struct_ref.pdbx_align_begin 248 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3L1B _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 233 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession B7ZM06 _struct_ref_seq.db_align_beg 248 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 476 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 248 _struct_ref_seq.pdbx_auth_seq_align_end 476 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3L1B GLY A 1 ? UNP B7ZM06 ? ? 'expression tag' 244 1 1 3L1B SER A 2 ? UNP B7ZM06 ? ? 'expression tag' 245 2 1 3L1B HIS A 3 ? UNP B7ZM06 ? ? 'expression tag' 246 3 1 3L1B GLY A 4 ? UNP B7ZM06 ? ? 'expression tag' 247 4 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 2 ? LEU A 6 ? SER A 245 LEU A 249 5 ? 5 HELX_P HELX_P2 2 THR A 7 ? ASN A 22 ? THR A 250 ASN A 265 1 ? 16 HELX_P HELX_P3 3 ALA A 41 ? LEU A 66 ? ALA A 284 LEU A 309 1 ? 26 HELX_P HELX_P4 4 GLY A 68 ? LEU A 72 ? GLY A 311 LEU A 315 5 ? 5 HELX_P HELX_P5 5 ASP A 73 ? LYS A 100 ? ASP A 316 LYS A 343 1 ? 28 HELX_P HELX_P6 6 PRO A 102 ? GLY A 104 ? PRO A 345 GLY A 347 5 ? 3 HELX_P HELX_P7 7 HIS A 105 ? ASN A 115 ? HIS A 348 ASN A 358 1 ? 11 HELX_P HELX_P8 8 SER A 119 ? LEU A 136 ? SER A 362 LEU A 379 1 ? 18 HELX_P HELX_P9 9 THR A 139 ? LEU A 152 ? THR A 382 LEU A 395 1 ? 14 HELX_P HELX_P10 10 ASP A 161 ? GLN A 184 ? ASP A 404 GLN A 427 1 ? 24 HELX_P HELX_P11 11 GLN A 189 ? THR A 203 ? GLN A 432 THR A 446 1 ? 15 HELX_P HELX_P12 12 THR A 203 ? ASN A 218 ? THR A 446 ASN A 461 1 ? 16 HELX_P HELX_P13 13 THR A 223 ? TRP A 230 ? THR A 466 TRP A 473 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id 635 _struct_site.pdbx_auth_seq_id 1 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 14 _struct_site.details 'BINDING SITE FOR RESIDUE 635 A 1' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 14 PHE A 45 ? PHE A 288 . ? 1_555 ? 2 AC1 14 LEU A 48 ? LEU A 291 . ? 1_555 ? 3 AC1 14 THR A 49 ? THR A 292 . ? 1_555 ? 4 AC1 14 MET A 51 ? MET A 294 . ? 1_555 ? 5 AC1 14 ALA A 52 ? ALA A 295 . ? 1_555 ? 6 AC1 14 MET A 89 ? MET A 332 . ? 1_555 ? 7 AC1 14 SER A 93 ? SER A 336 . ? 1_555 ? 8 AC1 14 ILE A 96 ? ILE A 339 . ? 1_555 ? 9 AC1 14 LYS A 100 ? LYS A 343 . ? 1_555 ? 10 AC1 14 LEU A 109 ? LEU A 352 . ? 1_555 ? 11 AC1 14 ILE A 113 ? ILE A 356 . ? 1_555 ? 12 AC1 14 TYR A 130 ? TYR A 373 . ? 1_555 ? 13 AC1 14 TRP A 215 ? TRP A 458 . ? 1_555 ? 14 AC1 14 TRP A 230 ? TRP A 473 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 284 ? ? 84.40 -98.09 2 1 LYS A 380 ? ? 26.30 64.98 3 1 TYR A 401 ? ? 84.69 0.68 4 1 LYS A 464 ? ? 51.78 150.27 # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -5.0697 _pdbx_refine_tls.origin_y -7.6295 _pdbx_refine_tls.origin_z 14.7957 _pdbx_refine_tls.T[1][1] 0.1655 _pdbx_refine_tls.T[2][2] 0.2682 _pdbx_refine_tls.T[3][3] 0.2721 _pdbx_refine_tls.T[1][2] -0.0177 _pdbx_refine_tls.T[1][3] -0.0074 _pdbx_refine_tls.T[2][3] -0.0135 _pdbx_refine_tls.L[1][1] 0.5460 _pdbx_refine_tls.L[2][2] 1.8917 _pdbx_refine_tls.L[3][3] 3.3808 _pdbx_refine_tls.L[1][2] 0.2935 _pdbx_refine_tls.L[1][3] -0.0116 _pdbx_refine_tls.L[2][3] -0.2020 _pdbx_refine_tls.S[1][1] 0.0376 _pdbx_refine_tls.S[1][2] -0.0311 _pdbx_refine_tls.S[1][3] -0.0561 _pdbx_refine_tls.S[2][1] 0.0105 _pdbx_refine_tls.S[2][2] -0.0032 _pdbx_refine_tls.S[2][3] 0.1316 _pdbx_refine_tls.S[3][1] 0.0261 _pdbx_refine_tls.S[3][2] -0.2820 _pdbx_refine_tls.S[3][3] -0.0001 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 245 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 475 _pdbx_refine_tls_group.selection_details 'chain A' _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 244 ? A GLY 1 2 1 Y 1 A ARG 268 ? A ARG 25 3 1 Y 1 A MET 269 ? A MET 26 4 1 Y 1 A PRO 270 ? A PRO 27 5 1 Y 1 A GLN 271 ? A GLN 28 6 1 Y 1 A GLU 272 ? A GLU 29 7 1 Y 1 A ILE 273 ? A ILE 30 8 1 Y 1 A THR 274 ? A THR 31 9 1 Y 1 A ASN 275 ? A ASN 32 10 1 Y 1 A LYS 276 ? A LYS 33 11 1 Y 1 A ILE 277 ? A ILE 34 12 1 Y 1 A LEU 278 ? A LEU 35 13 1 Y 1 A LYS 279 ? A LYS 36 14 1 Y 1 A GLU 280 ? A GLU 37 15 1 Y 1 A GLU 281 ? A GLU 38 16 1 Y 1 A PHE 282 ? A PHE 39 17 1 Y 1 A GLN 476 ? A GLN 233 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 635 C1 C N N 1 635 F1 F N N 2 635 N1 N N N 3 635 O1 O N N 4 635 C2 C N N 5 635 N2 N Y N 6 635 O2 O N N 7 635 C3 C N N 8 635 N3 N N N 9 635 O3 O N N 10 635 C4 C N N 11 635 O4 O N N 12 635 C5 C N N 13 635 O5 O N N 14 635 C6 C N N 15 635 C7 C N N 16 635 C8 C N N 17 635 C9 C Y N 18 635 C10 C Y N 19 635 C11 C Y N 20 635 C12 C Y N 21 635 C13 C Y N 22 635 C14 C Y N 23 635 C15 C Y N 24 635 C16 C Y N 25 635 C17 C N N 26 635 C18 C N N 27 635 C19 C N N 28 635 C20 C Y N 29 635 C21 C Y N 30 635 C22 C Y N 31 635 C23 C Y N 32 635 C24 C Y N 33 635 C25 C Y N 34 635 C26 C N N 35 635 C27 C N N 36 635 C28 C N N 37 635 C29 C N N 38 635 C30 C N N 39 635 C31 C N N 40 635 C32 C N N 41 635 H1 H N N 42 635 H1A H N N 43 635 H1B H N N 44 635 H2 H N N 45 635 HN2 H N N 46 635 H3 H N N 47 635 H3A H N N 48 635 H3B H N N 49 635 H6 H N N 50 635 H7 H N N 51 635 H7A H N N 52 635 H13 H N N 53 635 H14 H N N 54 635 H16 H N N 55 635 H17 H N N 56 635 H17A H N N 57 635 H17B H N N 58 635 H18 H N N 59 635 H18A H N N 60 635 H18B H N N 61 635 H21 H N N 62 635 H22 H N N 63 635 H24 H N N 64 635 H25 H N N 65 635 H26 H N N 66 635 H26A H N N 67 635 H27 H N N 68 635 H27A H N N 69 635 H28 H N N 70 635 H28A H N N 71 635 H29 H N N 72 635 H29A H N N 73 635 H30 H N N 74 635 H30A H N N 75 635 H31 H N N 76 635 H31A H N N 77 635 H32 H N N 78 635 H32A H N N 79 ALA N N N N 80 ALA CA C N S 81 ALA C C N N 82 ALA O O N N 83 ALA CB C N N 84 ALA OXT O N N 85 ALA H H N N 86 ALA H2 H N N 87 ALA HA H N N 88 ALA HB1 H N N 89 ALA HB2 H N N 90 ALA HB3 H N N 91 ALA HXT H N N 92 ARG N N N N 93 ARG CA C N S 94 ARG C C N N 95 ARG O O N N 96 ARG CB C N N 97 ARG CG C N N 98 ARG CD C N N 99 ARG NE N N N 100 ARG CZ C N N 101 ARG NH1 N N N 102 ARG NH2 N N N 103 ARG OXT O N N 104 ARG H H N N 105 ARG H2 H N N 106 ARG HA H N N 107 ARG HB2 H N N 108 ARG HB3 H N N 109 ARG HG2 H N N 110 ARG HG3 H N N 111 ARG HD2 H N N 112 ARG HD3 H N N 113 ARG HE H N N 114 ARG HH11 H N N 115 ARG HH12 H N N 116 ARG HH21 H N N 117 ARG HH22 H N N 118 ARG HXT H N N 119 ASN N N N N 120 ASN CA C N S 121 ASN C C N N 122 ASN O O N N 123 ASN CB C N N 124 ASN CG C N N 125 ASN OD1 O N N 126 ASN ND2 N N N 127 ASN OXT O N N 128 ASN H H N N 129 ASN H2 H N N 130 ASN HA H N N 131 ASN HB2 H N N 132 ASN HB3 H N N 133 ASN HD21 H N N 134 ASN HD22 H N N 135 ASN HXT H N N 136 ASP N N N N 137 ASP CA C N S 138 ASP C C N N 139 ASP O O N N 140 ASP CB C N N 141 ASP CG C N N 142 ASP OD1 O N N 143 ASP OD2 O N N 144 ASP OXT O N N 145 ASP H H N N 146 ASP H2 H N N 147 ASP HA H N N 148 ASP HB2 H N N 149 ASP HB3 H N N 150 ASP HD2 H N N 151 ASP HXT H N N 152 CYS N N N N 153 CYS CA C N R 154 CYS C C N N 155 CYS O O N N 156 CYS CB C N N 157 CYS SG S N N 158 CYS OXT O N N 159 CYS H H N N 160 CYS H2 H N N 161 CYS HA H N N 162 CYS HB2 H N N 163 CYS HB3 H N N 164 CYS HG H N N 165 CYS HXT H N N 166 GLN N N N N 167 GLN CA C N S 168 GLN C C N N 169 GLN O O N N 170 GLN CB C N N 171 GLN CG C N N 172 GLN CD C N N 173 GLN OE1 O N N 174 GLN NE2 N N N 175 GLN OXT O N N 176 GLN H H N N 177 GLN H2 H N N 178 GLN HA H N N 179 GLN HB2 H N N 180 GLN HB3 H N N 181 GLN HG2 H N N 182 GLN HG3 H N N 183 GLN HE21 H N N 184 GLN HE22 H N N 185 GLN HXT H N N 186 GLU N N N N 187 GLU CA C N S 188 GLU C C N N 189 GLU O O N N 190 GLU CB C N N 191 GLU CG C N N 192 GLU CD C N N 193 GLU OE1 O N N 194 GLU OE2 O N N 195 GLU OXT O N N 196 GLU H H N N 197 GLU H2 H N N 198 GLU HA H N N 199 GLU HB2 H N N 200 GLU HB3 H N N 201 GLU HG2 H N N 202 GLU HG3 H N N 203 GLU HE2 H N N 204 GLU HXT H N N 205 GLY N N N N 206 GLY CA C N N 207 GLY C C N N 208 GLY O O N N 209 GLY OXT O N N 210 GLY H H N N 211 GLY H2 H N N 212 GLY HA2 H N N 213 GLY HA3 H N N 214 GLY HXT H N N 215 HIS N N N N 216 HIS CA C N S 217 HIS C C N N 218 HIS O O N N 219 HIS CB C N N 220 HIS CG C Y N 221 HIS ND1 N Y N 222 HIS CD2 C Y N 223 HIS CE1 C Y N 224 HIS NE2 N Y N 225 HIS OXT O N N 226 HIS H H N N 227 HIS H2 H N N 228 HIS HA H N N 229 HIS HB2 H N N 230 HIS HB3 H N N 231 HIS HD1 H N N 232 HIS HD2 H N N 233 HIS HE1 H N N 234 HIS HE2 H N N 235 HIS HXT H N N 236 HOH O O N N 237 HOH H1 H N N 238 HOH H2 H N N 239 ILE N N N N 240 ILE CA C N S 241 ILE C C N N 242 ILE O O N N 243 ILE CB C N S 244 ILE CG1 C N N 245 ILE CG2 C N N 246 ILE CD1 C N N 247 ILE OXT O N N 248 ILE H H N N 249 ILE H2 H N N 250 ILE HA H N N 251 ILE HB H N N 252 ILE HG12 H N N 253 ILE HG13 H N N 254 ILE HG21 H N N 255 ILE HG22 H N N 256 ILE HG23 H N N 257 ILE HD11 H N N 258 ILE HD12 H N N 259 ILE HD13 H N N 260 ILE HXT H N N 261 LEU N N N N 262 LEU CA C N S 263 LEU C C N N 264 LEU O O N N 265 LEU CB C N N 266 LEU CG C N N 267 LEU CD1 C N N 268 LEU CD2 C N N 269 LEU OXT O N N 270 LEU H H N N 271 LEU H2 H N N 272 LEU HA H N N 273 LEU HB2 H N N 274 LEU HB3 H N N 275 LEU HG H N N 276 LEU HD11 H N N 277 LEU HD12 H N N 278 LEU HD13 H N N 279 LEU HD21 H N N 280 LEU HD22 H N N 281 LEU HD23 H N N 282 LEU HXT H N N 283 LYS N N N N 284 LYS CA C N S 285 LYS C C N N 286 LYS O O N N 287 LYS CB C N N 288 LYS CG C N N 289 LYS CD C N N 290 LYS CE C N N 291 LYS NZ N N N 292 LYS OXT O N N 293 LYS H H N N 294 LYS H2 H N N 295 LYS HA H N N 296 LYS HB2 H N N 297 LYS HB3 H N N 298 LYS HG2 H N N 299 LYS HG3 H N N 300 LYS HD2 H N N 301 LYS HD3 H N N 302 LYS HE2 H N N 303 LYS HE3 H N N 304 LYS HZ1 H N N 305 LYS HZ2 H N N 306 LYS HZ3 H N N 307 LYS HXT H N N 308 MET N N N N 309 MET CA C N S 310 MET C C N N 311 MET O O N N 312 MET CB C N N 313 MET CG C N N 314 MET SD S N N 315 MET CE C N N 316 MET OXT O N N 317 MET H H N N 318 MET H2 H N N 319 MET HA H N N 320 MET HB2 H N N 321 MET HB3 H N N 322 MET HG2 H N N 323 MET HG3 H N N 324 MET HE1 H N N 325 MET HE2 H N N 326 MET HE3 H N N 327 MET HXT H N N 328 PHE N N N N 329 PHE CA C N S 330 PHE C C N N 331 PHE O O N N 332 PHE CB C N N 333 PHE CG C Y N 334 PHE CD1 C Y N 335 PHE CD2 C Y N 336 PHE CE1 C Y N 337 PHE CE2 C Y N 338 PHE CZ C Y N 339 PHE OXT O N N 340 PHE H H N N 341 PHE H2 H N N 342 PHE HA H N N 343 PHE HB2 H N N 344 PHE HB3 H N N 345 PHE HD1 H N N 346 PHE HD2 H N N 347 PHE HE1 H N N 348 PHE HE2 H N N 349 PHE HZ H N N 350 PHE HXT H N N 351 PRO N N N N 352 PRO CA C N S 353 PRO C C N N 354 PRO O O N N 355 PRO CB C N N 356 PRO CG C N N 357 PRO CD C N N 358 PRO OXT O N N 359 PRO H H N N 360 PRO HA H N N 361 PRO HB2 H N N 362 PRO HB3 H N N 363 PRO HG2 H N N 364 PRO HG3 H N N 365 PRO HD2 H N N 366 PRO HD3 H N N 367 PRO HXT H N N 368 SER N N N N 369 SER CA C N S 370 SER C C N N 371 SER O O N N 372 SER CB C N N 373 SER OG O N N 374 SER OXT O N N 375 SER H H N N 376 SER H2 H N N 377 SER HA H N N 378 SER HB2 H N N 379 SER HB3 H N N 380 SER HG H N N 381 SER HXT H N N 382 THR N N N N 383 THR CA C N S 384 THR C C N N 385 THR O O N N 386 THR CB C N R 387 THR OG1 O N N 388 THR CG2 C N N 389 THR OXT O N N 390 THR H H N N 391 THR H2 H N N 392 THR HA H N N 393 THR HB H N N 394 THR HG1 H N N 395 THR HG21 H N N 396 THR HG22 H N N 397 THR HG23 H N N 398 THR HXT H N N 399 TRP N N N N 400 TRP CA C N S 401 TRP C C N N 402 TRP O O N N 403 TRP CB C N N 404 TRP CG C Y N 405 TRP CD1 C Y N 406 TRP CD2 C Y N 407 TRP NE1 N Y N 408 TRP CE2 C Y N 409 TRP CE3 C Y N 410 TRP CZ2 C Y N 411 TRP CZ3 C Y N 412 TRP CH2 C Y N 413 TRP OXT O N N 414 TRP H H N N 415 TRP H2 H N N 416 TRP HA H N N 417 TRP HB2 H N N 418 TRP HB3 H N N 419 TRP HD1 H N N 420 TRP HE1 H N N 421 TRP HE3 H N N 422 TRP HZ2 H N N 423 TRP HZ3 H N N 424 TRP HH2 H N N 425 TRP HXT H N N 426 TYR N N N N 427 TYR CA C N S 428 TYR C C N N 429 TYR O O N N 430 TYR CB C N N 431 TYR CG C Y N 432 TYR CD1 C Y N 433 TYR CD2 C Y N 434 TYR CE1 C Y N 435 TYR CE2 C Y N 436 TYR CZ C Y N 437 TYR OH O N N 438 TYR OXT O N N 439 TYR H H N N 440 TYR H2 H N N 441 TYR HA H N N 442 TYR HB2 H N N 443 TYR HB3 H N N 444 TYR HD1 H N N 445 TYR HD2 H N N 446 TYR HE1 H N N 447 TYR HE2 H N N 448 TYR HH H N N 449 TYR HXT H N N 450 VAL N N N N 451 VAL CA C N S 452 VAL C C N N 453 VAL O O N N 454 VAL CB C N N 455 VAL CG1 C N N 456 VAL CG2 C N N 457 VAL OXT O N N 458 VAL H H N N 459 VAL H2 H N N 460 VAL HA H N N 461 VAL HB H N N 462 VAL HG11 H N N 463 VAL HG12 H N N 464 VAL HG13 H N N 465 VAL HG21 H N N 466 VAL HG22 H N N 467 VAL HG23 H N N 468 VAL HXT H N N 469 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 635 C1 C2 sing N N 1 635 F1 C15 sing N N 2 635 N1 C6 sing N N 3 635 N1 C7 sing N N 4 635 N1 C19 sing N N 5 635 O1 C2 sing N N 6 635 O1 C4 sing N N 7 635 C2 C3 sing N N 8 635 N2 C10 sing Y N 9 635 N2 C11 sing Y N 10 635 O2 C4 doub N N 11 635 N3 C28 sing N N 12 635 N3 C29 sing N N 13 635 N3 C32 sing N N 14 635 O3 C19 doub N N 15 635 C4 C5 sing N N 16 635 O4 C23 sing N N 17 635 O4 C26 sing N N 18 635 C5 C6 doub N N 19 635 C5 C10 sing N N 20 635 O5 C30 sing N N 21 635 O5 C31 sing N N 22 635 C7 C8 sing N N 23 635 C8 C9 sing N N 24 635 C8 C17 sing N N 25 635 C8 C18 sing N N 26 635 C9 C10 doub Y N 27 635 C9 C12 sing Y N 28 635 C11 C12 doub Y N 29 635 C11 C16 sing Y N 30 635 C12 C13 sing Y N 31 635 C13 C14 doub Y N 32 635 C14 C15 sing Y N 33 635 C15 C16 doub Y N 34 635 C19 C20 sing N N 35 635 C20 C21 doub Y N 36 635 C20 C25 sing Y N 37 635 C21 C22 sing Y N 38 635 C22 C23 doub Y N 39 635 C23 C24 sing Y N 40 635 C24 C25 doub Y N 41 635 C26 C27 sing N N 42 635 C27 C28 sing N N 43 635 C29 C30 sing N N 44 635 C31 C32 sing N N 45 635 C1 H1 sing N N 46 635 C1 H1A sing N N 47 635 C1 H1B sing N N 48 635 C2 H2 sing N N 49 635 N2 HN2 sing N N 50 635 C3 H3 sing N N 51 635 C3 H3A sing N N 52 635 C3 H3B sing N N 53 635 C6 H6 sing N N 54 635 C7 H7 sing N N 55 635 C7 H7A sing N N 56 635 C13 H13 sing N N 57 635 C14 H14 sing N N 58 635 C16 H16 sing N N 59 635 C17 H17 sing N N 60 635 C17 H17A sing N N 61 635 C17 H17B sing N N 62 635 C18 H18 sing N N 63 635 C18 H18A sing N N 64 635 C18 H18B sing N N 65 635 C21 H21 sing N N 66 635 C22 H22 sing N N 67 635 C24 H24 sing N N 68 635 C25 H25 sing N N 69 635 C26 H26 sing N N 70 635 C26 H26A sing N N 71 635 C27 H27 sing N N 72 635 C27 H27A sing N N 73 635 C28 H28 sing N N 74 635 C28 H28A sing N N 75 635 C29 H29 sing N N 76 635 C29 H29A sing N N 77 635 C30 H30 sing N N 78 635 C30 H30A sing N N 79 635 C31 H31 sing N N 80 635 C31 H31A sing N N 81 635 C32 H32 sing N N 82 635 C32 H32A sing N N 83 ALA N CA sing N N 84 ALA N H sing N N 85 ALA N H2 sing N N 86 ALA CA C sing N N 87 ALA CA CB sing N N 88 ALA CA HA sing N N 89 ALA C O doub N N 90 ALA C OXT sing N N 91 ALA CB HB1 sing N N 92 ALA CB HB2 sing N N 93 ALA CB HB3 sing N N 94 ALA OXT HXT sing N N 95 ARG N CA sing N N 96 ARG N H sing N N 97 ARG N H2 sing N N 98 ARG CA C sing N N 99 ARG CA CB sing N N 100 ARG CA HA sing N N 101 ARG C O doub N N 102 ARG C OXT sing N N 103 ARG CB CG sing N N 104 ARG CB HB2 sing N N 105 ARG CB HB3 sing N N 106 ARG CG CD sing N N 107 ARG CG HG2 sing N N 108 ARG CG HG3 sing N N 109 ARG CD NE sing N N 110 ARG CD HD2 sing N N 111 ARG CD HD3 sing N N 112 ARG NE CZ sing N N 113 ARG NE HE sing N N 114 ARG CZ NH1 sing N N 115 ARG CZ NH2 doub N N 116 ARG NH1 HH11 sing N N 117 ARG NH1 HH12 sing N N 118 ARG NH2 HH21 sing N N 119 ARG NH2 HH22 sing N N 120 ARG OXT HXT sing N N 121 ASN N CA sing N N 122 ASN N H sing N N 123 ASN N H2 sing N N 124 ASN CA C sing N N 125 ASN CA CB sing N N 126 ASN CA HA sing N N 127 ASN C O doub N N 128 ASN C OXT sing N N 129 ASN CB CG sing N N 130 ASN CB HB2 sing N N 131 ASN CB HB3 sing N N 132 ASN CG OD1 doub N N 133 ASN CG ND2 sing N N 134 ASN ND2 HD21 sing N N 135 ASN ND2 HD22 sing N N 136 ASN OXT HXT sing N N 137 ASP N CA sing N N 138 ASP N H sing N N 139 ASP N H2 sing N N 140 ASP CA C sing N N 141 ASP CA CB sing N N 142 ASP CA HA sing N N 143 ASP C O doub N N 144 ASP C OXT sing N N 145 ASP CB CG sing N N 146 ASP CB HB2 sing N N 147 ASP CB HB3 sing N N 148 ASP CG OD1 doub N N 149 ASP CG OD2 sing N N 150 ASP OD2 HD2 sing N N 151 ASP OXT HXT sing N N 152 CYS N CA sing N N 153 CYS N H sing N N 154 CYS N H2 sing N N 155 CYS CA C sing N N 156 CYS CA CB sing N N 157 CYS CA HA sing N N 158 CYS C O doub N N 159 CYS C OXT sing N N 160 CYS CB SG sing N N 161 CYS CB HB2 sing N N 162 CYS CB HB3 sing N N 163 CYS SG HG sing N N 164 CYS OXT HXT sing N N 165 GLN N CA sing N N 166 GLN N H sing N N 167 GLN N H2 sing N N 168 GLN CA C sing N N 169 GLN CA CB sing N N 170 GLN CA HA sing N N 171 GLN C O doub N N 172 GLN C OXT sing N N 173 GLN CB CG sing N N 174 GLN CB HB2 sing N N 175 GLN CB HB3 sing N N 176 GLN CG CD sing N N 177 GLN CG HG2 sing N N 178 GLN CG HG3 sing N N 179 GLN CD OE1 doub N N 180 GLN CD NE2 sing N N 181 GLN NE2 HE21 sing N N 182 GLN NE2 HE22 sing N N 183 GLN OXT HXT sing N N 184 GLU N CA sing N N 185 GLU N H sing N N 186 GLU N H2 sing N N 187 GLU CA C sing N N 188 GLU CA CB sing N N 189 GLU CA HA sing N N 190 GLU C O doub N N 191 GLU C OXT sing N N 192 GLU CB CG sing N N 193 GLU CB HB2 sing N N 194 GLU CB HB3 sing N N 195 GLU CG CD sing N N 196 GLU CG HG2 sing N N 197 GLU CG HG3 sing N N 198 GLU CD OE1 doub N N 199 GLU CD OE2 sing N N 200 GLU OE2 HE2 sing N N 201 GLU OXT HXT sing N N 202 GLY N CA sing N N 203 GLY N H sing N N 204 GLY N H2 sing N N 205 GLY CA C sing N N 206 GLY CA HA2 sing N N 207 GLY CA HA3 sing N N 208 GLY C O doub N N 209 GLY C OXT sing N N 210 GLY OXT HXT sing N N 211 HIS N CA sing N N 212 HIS N H sing N N 213 HIS N H2 sing N N 214 HIS CA C sing N N 215 HIS CA CB sing N N 216 HIS CA HA sing N N 217 HIS C O doub N N 218 HIS C OXT sing N N 219 HIS CB CG sing N N 220 HIS CB HB2 sing N N 221 HIS CB HB3 sing N N 222 HIS CG ND1 sing Y N 223 HIS CG CD2 doub Y N 224 HIS ND1 CE1 doub Y N 225 HIS ND1 HD1 sing N N 226 HIS CD2 NE2 sing Y N 227 HIS CD2 HD2 sing N N 228 HIS CE1 NE2 sing Y N 229 HIS CE1 HE1 sing N N 230 HIS NE2 HE2 sing N N 231 HIS OXT HXT sing N N 232 HOH O H1 sing N N 233 HOH O H2 sing N N 234 ILE N CA sing N N 235 ILE N H sing N N 236 ILE N H2 sing N N 237 ILE CA C sing N N 238 ILE CA CB sing N N 239 ILE CA HA sing N N 240 ILE C O doub N N 241 ILE C OXT sing N N 242 ILE CB CG1 sing N N 243 ILE CB CG2 sing N N 244 ILE CB HB sing N N 245 ILE CG1 CD1 sing N N 246 ILE CG1 HG12 sing N N 247 ILE CG1 HG13 sing N N 248 ILE CG2 HG21 sing N N 249 ILE CG2 HG22 sing N N 250 ILE CG2 HG23 sing N N 251 ILE CD1 HD11 sing N N 252 ILE CD1 HD12 sing N N 253 ILE CD1 HD13 sing N N 254 ILE OXT HXT sing N N 255 LEU N CA sing N N 256 LEU N H sing N N 257 LEU N H2 sing N N 258 LEU CA C sing N N 259 LEU CA CB sing N N 260 LEU CA HA sing N N 261 LEU C O doub N N 262 LEU C OXT sing N N 263 LEU CB CG sing N N 264 LEU CB HB2 sing N N 265 LEU CB HB3 sing N N 266 LEU CG CD1 sing N N 267 LEU CG CD2 sing N N 268 LEU CG HG sing N N 269 LEU CD1 HD11 sing N N 270 LEU CD1 HD12 sing N N 271 LEU CD1 HD13 sing N N 272 LEU CD2 HD21 sing N N 273 LEU CD2 HD22 sing N N 274 LEU CD2 HD23 sing N N 275 LEU OXT HXT sing N N 276 LYS N CA sing N N 277 LYS N H sing N N 278 LYS N H2 sing N N 279 LYS CA C sing N N 280 LYS CA CB sing N N 281 LYS CA HA sing N N 282 LYS C O doub N N 283 LYS C OXT sing N N 284 LYS CB CG sing N N 285 LYS CB HB2 sing N N 286 LYS CB HB3 sing N N 287 LYS CG CD sing N N 288 LYS CG HG2 sing N N 289 LYS CG HG3 sing N N 290 LYS CD CE sing N N 291 LYS CD HD2 sing N N 292 LYS CD HD3 sing N N 293 LYS CE NZ sing N N 294 LYS CE HE2 sing N N 295 LYS CE HE3 sing N N 296 LYS NZ HZ1 sing N N 297 LYS NZ HZ2 sing N N 298 LYS NZ HZ3 sing N N 299 LYS OXT HXT sing N N 300 MET N CA sing N N 301 MET N H sing N N 302 MET N H2 sing N N 303 MET CA C sing N N 304 MET CA CB sing N N 305 MET CA HA sing N N 306 MET C O doub N N 307 MET C OXT sing N N 308 MET CB CG sing N N 309 MET CB HB2 sing N N 310 MET CB HB3 sing N N 311 MET CG SD sing N N 312 MET CG HG2 sing N N 313 MET CG HG3 sing N N 314 MET SD CE sing N N 315 MET CE HE1 sing N N 316 MET CE HE2 sing N N 317 MET CE HE3 sing N N 318 MET OXT HXT sing N N 319 PHE N CA sing N N 320 PHE N H sing N N 321 PHE N H2 sing N N 322 PHE CA C sing N N 323 PHE CA CB sing N N 324 PHE CA HA sing N N 325 PHE C O doub N N 326 PHE C OXT sing N N 327 PHE CB CG sing N N 328 PHE CB HB2 sing N N 329 PHE CB HB3 sing N N 330 PHE CG CD1 doub Y N 331 PHE CG CD2 sing Y N 332 PHE CD1 CE1 sing Y N 333 PHE CD1 HD1 sing N N 334 PHE CD2 CE2 doub Y N 335 PHE CD2 HD2 sing N N 336 PHE CE1 CZ doub Y N 337 PHE CE1 HE1 sing N N 338 PHE CE2 CZ sing Y N 339 PHE CE2 HE2 sing N N 340 PHE CZ HZ sing N N 341 PHE OXT HXT sing N N 342 PRO N CA sing N N 343 PRO N CD sing N N 344 PRO N H sing N N 345 PRO CA C sing N N 346 PRO CA CB sing N N 347 PRO CA HA sing N N 348 PRO C O doub N N 349 PRO C OXT sing N N 350 PRO CB CG sing N N 351 PRO CB HB2 sing N N 352 PRO CB HB3 sing N N 353 PRO CG CD sing N N 354 PRO CG HG2 sing N N 355 PRO CG HG3 sing N N 356 PRO CD HD2 sing N N 357 PRO CD HD3 sing N N 358 PRO OXT HXT sing N N 359 SER N CA sing N N 360 SER N H sing N N 361 SER N H2 sing N N 362 SER CA C sing N N 363 SER CA CB sing N N 364 SER CA HA sing N N 365 SER C O doub N N 366 SER C OXT sing N N 367 SER CB OG sing N N 368 SER CB HB2 sing N N 369 SER CB HB3 sing N N 370 SER OG HG sing N N 371 SER OXT HXT sing N N 372 THR N CA sing N N 373 THR N H sing N N 374 THR N H2 sing N N 375 THR CA C sing N N 376 THR CA CB sing N N 377 THR CA HA sing N N 378 THR C O doub N N 379 THR C OXT sing N N 380 THR CB OG1 sing N N 381 THR CB CG2 sing N N 382 THR CB HB sing N N 383 THR OG1 HG1 sing N N 384 THR CG2 HG21 sing N N 385 THR CG2 HG22 sing N N 386 THR CG2 HG23 sing N N 387 THR OXT HXT sing N N 388 TRP N CA sing N N 389 TRP N H sing N N 390 TRP N H2 sing N N 391 TRP CA C sing N N 392 TRP CA CB sing N N 393 TRP CA HA sing N N 394 TRP C O doub N N 395 TRP C OXT sing N N 396 TRP CB CG sing N N 397 TRP CB HB2 sing N N 398 TRP CB HB3 sing N N 399 TRP CG CD1 doub Y N 400 TRP CG CD2 sing Y N 401 TRP CD1 NE1 sing Y N 402 TRP CD1 HD1 sing N N 403 TRP CD2 CE2 doub Y N 404 TRP CD2 CE3 sing Y N 405 TRP NE1 CE2 sing Y N 406 TRP NE1 HE1 sing N N 407 TRP CE2 CZ2 sing Y N 408 TRP CE3 CZ3 doub Y N 409 TRP CE3 HE3 sing N N 410 TRP CZ2 CH2 doub Y N 411 TRP CZ2 HZ2 sing N N 412 TRP CZ3 CH2 sing Y N 413 TRP CZ3 HZ3 sing N N 414 TRP CH2 HH2 sing N N 415 TRP OXT HXT sing N N 416 TYR N CA sing N N 417 TYR N H sing N N 418 TYR N H2 sing N N 419 TYR CA C sing N N 420 TYR CA CB sing N N 421 TYR CA HA sing N N 422 TYR C O doub N N 423 TYR C OXT sing N N 424 TYR CB CG sing N N 425 TYR CB HB2 sing N N 426 TYR CB HB3 sing N N 427 TYR CG CD1 doub Y N 428 TYR CG CD2 sing Y N 429 TYR CD1 CE1 sing Y N 430 TYR CD1 HD1 sing N N 431 TYR CD2 CE2 doub Y N 432 TYR CD2 HD2 sing N N 433 TYR CE1 CZ doub Y N 434 TYR CE1 HE1 sing N N 435 TYR CE2 CZ sing Y N 436 TYR CE2 HE2 sing N N 437 TYR CZ OH sing N N 438 TYR OH HH sing N N 439 TYR OXT HXT sing N N 440 VAL N CA sing N N 441 VAL N H sing N N 442 VAL N H2 sing N N 443 VAL CA C sing N N 444 VAL CA CB sing N N 445 VAL CA HA sing N N 446 VAL C O doub N N 447 VAL C OXT sing N N 448 VAL CB CG1 sing N N 449 VAL CB CG2 sing N N 450 VAL CB HB sing N N 451 VAL CG1 HG11 sing N N 452 VAL CG1 HG12 sing N N 453 VAL CG1 HG13 sing N N 454 VAL CG2 HG21 sing N N 455 VAL CG2 HG22 sing N N 456 VAL CG2 HG23 sing N N 457 VAL OXT HXT sing N N 458 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type other _pdbx_initial_refinement_model.source_name ? _pdbx_initial_refinement_model.details 'in-house FXR ligand-binding domain structure' # _atom_sites.entry_id 3L1B _atom_sites.fract_transf_matrix[1][1] 0.029546 _atom_sites.fract_transf_matrix[1][2] -0.000000 _atom_sites.fract_transf_matrix[1][3] -0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018062 _atom_sites.fract_transf_matrix[2][3] -0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008434 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C F N O S # loop_