data_3L23 # _entry.id 3L23 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3L23 pdb_00003l23 10.2210/pdb3l23/pdb RCSB RCSB056735 ? ? WWPDB D_1000056735 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 396634 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3L23 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-12-14 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Crystal structure of Sugar phosphate isomerase/epimerase (YP_001303399.1) from Parabacteroides distasonis ATCC 8503 at 1.70 A resolution ; _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3L23 _cell.length_a 77.657 _cell.length_b 56.634 _cell.length_c 78.188 _cell.angle_alpha 90.000 _cell.angle_beta 102.980 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3L23 _symmetry.Int_Tables_number 5 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Sugar phosphate isomerase/epimerase' 35034.445 1 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 5 ? ? ? ? 4 water nat water 18.015 270 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GALGVVDEVHAGKEIGLQIYSLSQELYKGDVAANLRKVKD(MSE)GYSKLELAGYGKGAIGGVP(MSE)(MSE)DFKK (MSE)AEDAGLKIISSHVNPVDTSISDPFKA(MSE)IFKYSKEVTPKI(MSE)EYWKATAADHAKLGCKYLIQP(MSE) (MSE)PTITTHDEAKLVCDIFNQASDVIKAEGIATGFGYHNHN(MSE)EFNRVATKEQQEKVKGNPFAAF(MSE)KVGDQ IYDL(MSE)LKDTDPSKVYFE(MSE)DVYWTV(MSE)GQNDPVEY(MSE)QKHPDRIKVLHIKDRAVFGQSG(MSE) (MSE)NFE(MSE)IFKQ(MSE)YANGIKDYFVELEQ(MSE)PDGRTQFAGVKDCADYLIKAPFVK ; _entity_poly.pdbx_seq_one_letter_code_can ;GALGVVDEVHAGKEIGLQIYSLSQELYKGDVAANLRKVKDMGYSKLELAGYGKGAIGGVPMMDFKKMAEDAGLKIISSHV NPVDTSISDPFKAMIFKYSKEVTPKIMEYWKATAADHAKLGCKYLIQPMMPTITTHDEAKLVCDIFNQASDVIKAEGIAT GFGYHNHNMEFNRVATKEQQEKVKGNPFAAFMKVGDQIYDLMLKDTDPSKVYFEMDVYWTVMGQNDPVEYMQKHPDRIKV LHIKDRAVFGQSGMMNFEMIFKQMYANGIKDYFVELEQMPDGRTQFAGVKDCADYLIKAPFVK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 396634 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 LEU n 1 4 GLY n 1 5 VAL n 1 6 VAL n 1 7 ASP n 1 8 GLU n 1 9 VAL n 1 10 HIS n 1 11 ALA n 1 12 GLY n 1 13 LYS n 1 14 GLU n 1 15 ILE n 1 16 GLY n 1 17 LEU n 1 18 GLN n 1 19 ILE n 1 20 TYR n 1 21 SER n 1 22 LEU n 1 23 SER n 1 24 GLN n 1 25 GLU n 1 26 LEU n 1 27 TYR n 1 28 LYS n 1 29 GLY n 1 30 ASP n 1 31 VAL n 1 32 ALA n 1 33 ALA n 1 34 ASN n 1 35 LEU n 1 36 ARG n 1 37 LYS n 1 38 VAL n 1 39 LYS n 1 40 ASP n 1 41 MSE n 1 42 GLY n 1 43 TYR n 1 44 SER n 1 45 LYS n 1 46 LEU n 1 47 GLU n 1 48 LEU n 1 49 ALA n 1 50 GLY n 1 51 TYR n 1 52 GLY n 1 53 LYS n 1 54 GLY n 1 55 ALA n 1 56 ILE n 1 57 GLY n 1 58 GLY n 1 59 VAL n 1 60 PRO n 1 61 MSE n 1 62 MSE n 1 63 ASP n 1 64 PHE n 1 65 LYS n 1 66 LYS n 1 67 MSE n 1 68 ALA n 1 69 GLU n 1 70 ASP n 1 71 ALA n 1 72 GLY n 1 73 LEU n 1 74 LYS n 1 75 ILE n 1 76 ILE n 1 77 SER n 1 78 SER n 1 79 HIS n 1 80 VAL n 1 81 ASN n 1 82 PRO n 1 83 VAL n 1 84 ASP n 1 85 THR n 1 86 SER n 1 87 ILE n 1 88 SER n 1 89 ASP n 1 90 PRO n 1 91 PHE n 1 92 LYS n 1 93 ALA n 1 94 MSE n 1 95 ILE n 1 96 PHE n 1 97 LYS n 1 98 TYR n 1 99 SER n 1 100 LYS n 1 101 GLU n 1 102 VAL n 1 103 THR n 1 104 PRO n 1 105 LYS n 1 106 ILE n 1 107 MSE n 1 108 GLU n 1 109 TYR n 1 110 TRP n 1 111 LYS n 1 112 ALA n 1 113 THR n 1 114 ALA n 1 115 ALA n 1 116 ASP n 1 117 HIS n 1 118 ALA n 1 119 LYS n 1 120 LEU n 1 121 GLY n 1 122 CYS n 1 123 LYS n 1 124 TYR n 1 125 LEU n 1 126 ILE n 1 127 GLN n 1 128 PRO n 1 129 MSE n 1 130 MSE n 1 131 PRO n 1 132 THR n 1 133 ILE n 1 134 THR n 1 135 THR n 1 136 HIS n 1 137 ASP n 1 138 GLU n 1 139 ALA n 1 140 LYS n 1 141 LEU n 1 142 VAL n 1 143 CYS n 1 144 ASP n 1 145 ILE n 1 146 PHE n 1 147 ASN n 1 148 GLN n 1 149 ALA n 1 150 SER n 1 151 ASP n 1 152 VAL n 1 153 ILE n 1 154 LYS n 1 155 ALA n 1 156 GLU n 1 157 GLY n 1 158 ILE n 1 159 ALA n 1 160 THR n 1 161 GLY n 1 162 PHE n 1 163 GLY n 1 164 TYR n 1 165 HIS n 1 166 ASN n 1 167 HIS n 1 168 ASN n 1 169 MSE n 1 170 GLU n 1 171 PHE n 1 172 ASN n 1 173 ARG n 1 174 VAL n 1 175 ALA n 1 176 THR n 1 177 LYS n 1 178 GLU n 1 179 GLN n 1 180 GLN n 1 181 GLU n 1 182 LYS n 1 183 VAL n 1 184 LYS n 1 185 GLY n 1 186 ASN n 1 187 PRO n 1 188 PHE n 1 189 ALA n 1 190 ALA n 1 191 PHE n 1 192 MSE n 1 193 LYS n 1 194 VAL n 1 195 GLY n 1 196 ASP n 1 197 GLN n 1 198 ILE n 1 199 TYR n 1 200 ASP n 1 201 LEU n 1 202 MSE n 1 203 LEU n 1 204 LYS n 1 205 ASP n 1 206 THR n 1 207 ASP n 1 208 PRO n 1 209 SER n 1 210 LYS n 1 211 VAL n 1 212 TYR n 1 213 PHE n 1 214 GLU n 1 215 MSE n 1 216 ASP n 1 217 VAL n 1 218 TYR n 1 219 TRP n 1 220 THR n 1 221 VAL n 1 222 MSE n 1 223 GLY n 1 224 GLN n 1 225 ASN n 1 226 ASP n 1 227 PRO n 1 228 VAL n 1 229 GLU n 1 230 TYR n 1 231 MSE n 1 232 GLN n 1 233 LYS n 1 234 HIS n 1 235 PRO n 1 236 ASP n 1 237 ARG n 1 238 ILE n 1 239 LYS n 1 240 VAL n 1 241 LEU n 1 242 HIS n 1 243 ILE n 1 244 LYS n 1 245 ASP n 1 246 ARG n 1 247 ALA n 1 248 VAL n 1 249 PHE n 1 250 GLY n 1 251 GLN n 1 252 SER n 1 253 GLY n 1 254 MSE n 1 255 MSE n 1 256 ASN n 1 257 PHE n 1 258 GLU n 1 259 MSE n 1 260 ILE n 1 261 PHE n 1 262 LYS n 1 263 GLN n 1 264 MSE n 1 265 TYR n 1 266 ALA n 1 267 ASN n 1 268 GLY n 1 269 ILE n 1 270 LYS n 1 271 ASP n 1 272 TYR n 1 273 PHE n 1 274 VAL n 1 275 GLU n 1 276 LEU n 1 277 GLU n 1 278 GLN n 1 279 MSE n 1 280 PRO n 1 281 ASP n 1 282 GLY n 1 283 ARG n 1 284 THR n 1 285 GLN n 1 286 PHE n 1 287 ALA n 1 288 GLY n 1 289 VAL n 1 290 LYS n 1 291 ASP n 1 292 CYS n 1 293 ALA n 1 294 ASP n 1 295 TYR n 1 296 LEU n 1 297 ILE n 1 298 LYS n 1 299 ALA n 1 300 PRO n 1 301 PHE n 1 302 VAL n 1 303 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene BDI_2046 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 8503 / DSM 20701 / NCTC 11152' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Parabacteroides distasonis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 435591 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A6LDL3_PARD8 _struct_ref.pdbx_db_accession A6LDL3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ALGVVDEVHAGKEIGLQIYSLSQELYKGDVAANLRKVKDMGYSKLELAGYGKGAIGGVPMMDFKKMAEDAGLKIISSHVN PVDTSISDPFKAMIFKYSKEVTPKIMEYWKATAADHAKLGCKYLIQPMMPTITTHDEAKLVCDIFNQASDVIKAEGIATG FGYHNHNMEFNRVATKEQQEKVKGNPFAAFMKVGDQIYDLMLKDTDPSKVYFEMDVYWTVMGQNDPVEYMQKHPDRIKVL HIKDRAVFGQSGMMNFEMIFKQMYANGIKDYFVELEQMPDGRTQFAGVKDCADYLIKAPFVK ; _struct_ref.pdbx_align_begin 33 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3L23 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 303 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A6LDL3 _struct_ref_seq.db_align_beg 33 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 334 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 33 _struct_ref_seq.pdbx_auth_seq_align_end 334 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3L23 _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code A6LDL3 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3L23 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.39 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 48.56 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.7 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '0.2000M MgAcetate, 20.0000% PEG-3350, No Buffer pH 7.7, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2009-07-08 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97935 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list 0.91837,0.97935 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3L23 _reflns.d_resolution_high 1.70 _reflns.d_resolution_low 28.318 _reflns.number_obs 36149 _reflns.pdbx_Rmerge_I_obs 0.045 _reflns.pdbx_netI_over_sigmaI 9.450 _reflns.percent_possible_obs 96.300 _reflns.B_iso_Wilson_estimate 19.269 _reflns.observed_criterion_sigma_I -3.00 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy 2.81 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.70 1.76 9530 ? 6555 0.339 1.970 ? ? ? ? ? 92.70 1 1 1.76 1.83 10059 ? 6880 0.251 2.6 ? ? ? ? ? 97.10 2 1 1.83 1.91 9815 ? 6730 0.190 3.4 ? ? ? ? ? 96.90 3 1 1.91 2.02 11040 ? 7545 0.141 4.6 ? ? ? ? ? 97.10 4 1 2.02 2.14 9570 ? 6540 0.096 6.4 ? ? ? ? ? 97.10 5 1 2.14 2.31 10510 ? 7144 0.068 8.6 ? ? ? ? ? 97.10 6 1 2.31 2.54 10257 ? 6925 0.054 10.8 ? ? ? ? ? 97.30 7 1 2.54 2.90 10012 ? 6753 0.040 13.8 ? ? ? ? ? 96.70 8 1 2.90 3.66 10392 ? 6951 0.030 18.8 ? ? ? ? ? 96.00 9 1 3.66 28.318 10293 ? 6801 0.025 23.6 ? ? ? ? ? 94.80 10 1 # _refine.entry_id 3L23 _refine.ls_d_res_high 1.700 _refine.ls_d_res_low 28.318 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.070 _refine.ls_number_reflns_obs 36149 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1.HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2.ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. 3.A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4.MAGNESIUM ION FROM CRYSTALLIZATION AND ETHYLENE GLYCOL MOLECULES FROM CRYOPROTECTANT ARE MODELED IN THE STRUCTURE, RESPECTIVELY. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.149 _refine.ls_R_factor_R_work 0.148 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.167 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 1806 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 34.044 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.010 _refine.aniso_B[2][2] 1.510 _refine.aniso_B[3][3] -1.390 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.220 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.972 _refine.correlation_coeff_Fo_to_Fc_free 0.968 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.084 _refine.pdbx_overall_ESU_R_Free 0.079 _refine.overall_SU_ML 0.057 _refine.overall_SU_B 3.520 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 70.29 _refine.B_iso_min 16.51 _refine.occupancy_max 1.00 _refine.occupancy_min 0.20 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2185 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 21 _refine_hist.number_atoms_solvent 270 _refine_hist.number_atoms_total 2476 _refine_hist.d_res_high 1.700 _refine_hist.d_res_low 28.318 # loop_ _refine_ls_restr.type _refine_ls_restr.pdbx_refine_id _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 'X-RAY DIFFRACTION' 2350 0.017 0.022 ? ? r_bond_other_d 'X-RAY DIFFRACTION' 1587 0.002 0.020 ? ? r_angle_refined_deg 'X-RAY DIFFRACTION' 3173 1.557 1.959 ? ? r_angle_other_deg 'X-RAY DIFFRACTION' 3898 1.020 3.000 ? ? r_dihedral_angle_1_deg 'X-RAY DIFFRACTION' 302 5.299 5.000 ? ? r_dihedral_angle_2_deg 'X-RAY DIFFRACTION' 102 36.251 25.294 ? ? r_dihedral_angle_3_deg 'X-RAY DIFFRACTION' 417 12.562 15.000 ? ? r_dihedral_angle_4_deg 'X-RAY DIFFRACTION' 6 12.353 15.000 ? ? r_chiral_restr 'X-RAY DIFFRACTION' 336 0.080 0.200 ? ? r_gen_planes_refined 'X-RAY DIFFRACTION' 2658 0.007 0.020 ? ? r_gen_planes_other 'X-RAY DIFFRACTION' 458 0.002 0.020 ? ? r_nbd_refined 'X-RAY DIFFRACTION' 467 0.211 0.300 ? ? r_nbd_other 'X-RAY DIFFRACTION' 1623 0.175 0.300 ? ? r_nbtor_refined 'X-RAY DIFFRACTION' 1153 0.183 0.500 ? ? r_nbtor_other 'X-RAY DIFFRACTION' 1117 0.088 0.500 ? ? r_xyhbond_nbd_refined 'X-RAY DIFFRACTION' 346 0.187 0.500 ? ? r_metal_ion_refined 'X-RAY DIFFRACTION' 2 0.003 0.500 ? ? r_symmetry_vdw_refined 'X-RAY DIFFRACTION' 2 0.139 0.300 ? ? r_symmetry_vdw_other 'X-RAY DIFFRACTION' 34 0.218 0.300 ? ? r_symmetry_hbond_refined 'X-RAY DIFFRACTION' 25 0.257 0.500 ? ? r_mcbond_it 'X-RAY DIFFRACTION' 1596 1.031 1.500 ? ? r_mcbond_other 'X-RAY DIFFRACTION' 594 0.255 1.500 ? ? r_mcangle_it 'X-RAY DIFFRACTION' 2358 1.385 2.000 ? ? r_scbond_it 'X-RAY DIFFRACTION' 983 2.375 3.000 ? ? r_scangle_it 'X-RAY DIFFRACTION' 814 3.062 4.500 ? ? # _refine_ls_shell.d_res_high 1.700 _refine_ls_shell.d_res_low 1.745 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 96.130 _refine_ls_shell.number_reflns_R_work 2428 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.207 _refine_ls_shell.R_factor_R_free 0.243 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 131 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2559 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3L23 _struct.title ;Crystal structure of Sugar phosphate isomerase/epimerase (YP_001303399.1) from Parabacteroides distasonis ATCC 8503 at 1.70 A resolution ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;Sugar phosphate isomerase/epimerase, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, Isomerase ; _struct_keywords.pdbx_keywords ISOMERASE _struct_keywords.entry_id 3L23 # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 4 ? # _struct_biol.id 1 _struct_biol.details 'ANALYTICAL SIZE EXCLUSION CHROMATOGRAPHY SUPPORTS THE ASSIGNMENT OF A MONOMER AS A SIGNIFICANT OLIGOMERIZATION STATE.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TYR A 20 ? LYS A 28 ? TYR A 51 LYS A 59 5 ? 9 HELX_P HELX_P2 2 ASP A 30 ? MSE A 41 ? ASP A 61 MSE A 72 1 ? 12 HELX_P HELX_P3 3 MSE A 61 ? ALA A 71 ? MSE A 92 ALA A 102 1 ? 11 HELX_P HELX_P4 4 VAL A 102 ? LEU A 120 ? VAL A 133 LEU A 151 1 ? 19 HELX_P HELX_P5 5 THR A 135 ? GLU A 156 ? THR A 166 GLU A 187 1 ? 22 HELX_P HELX_P6 6 ASN A 168 ? PHE A 171 ? ASN A 199 PHE A 202 5 ? 4 HELX_P HELX_P7 7 ILE A 198 ? THR A 206 ? ILE A 229 THR A 237 1 ? 9 HELX_P HELX_P8 8 VAL A 217 ? GLY A 223 ? VAL A 248 GLY A 254 1 ? 7 HELX_P HELX_P9 9 ASP A 226 ? HIS A 234 ? ASP A 257 HIS A 265 1 ? 9 HELX_P HELX_P10 10 ASN A 256 ? GLY A 268 ? ASN A 287 GLY A 299 1 ? 13 HELX_P HELX_P11 11 THR A 284 ? ALA A 299 ? THR A 315 ALA A 330 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ASP 40 C ? ? ? 1_555 A MSE 41 N ? ? A ASP 71 A MSE 72 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale2 covale both ? A MSE 41 C ? ? ? 1_555 A GLY 42 N ? ? A MSE 72 A GLY 73 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale3 covale both ? A PRO 60 C ? ? ? 1_555 A MSE 61 N ? ? A PRO 91 A MSE 92 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale4 covale both ? A MSE 61 C ? ? ? 1_555 A MSE 62 N ? ? A MSE 92 A MSE 93 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale5 covale both ? A MSE 62 C ? ? ? 1_555 A ASP 63 N ? ? A MSE 93 A ASP 94 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale6 covale both ? A LYS 66 C ? ? ? 1_555 A MSE 67 N ? ? A LYS 97 A MSE 98 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale7 covale both ? A MSE 67 C ? ? ? 1_555 A ALA 68 N ? ? A MSE 98 A ALA 99 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale8 covale both ? A ALA 93 C ? ? ? 1_555 A MSE 94 N A ? A ALA 124 A MSE 125 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale9 covale both ? A ALA 93 C ? ? ? 1_555 A MSE 94 N B ? A ALA 124 A MSE 125 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale10 covale both ? A MSE 94 C A ? ? 1_555 A ILE 95 N ? ? A MSE 125 A ILE 126 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale11 covale both ? A MSE 94 C B ? ? 1_555 A ILE 95 N ? ? A MSE 125 A ILE 126 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale12 covale both ? A ILE 106 C ? ? ? 1_555 A MSE 107 N ? ? A ILE 137 A MSE 138 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale13 covale both ? A MSE 107 C ? ? ? 1_555 A GLU 108 N A ? A MSE 138 A GLU 139 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale14 covale both ? A MSE 107 C ? ? ? 1_555 A GLU 108 N B ? A MSE 138 A GLU 139 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale15 covale both ? A PRO 128 C ? ? ? 1_555 A MSE 129 N ? ? A PRO 159 A MSE 160 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale16 covale both ? A MSE 129 C ? ? ? 1_555 A MSE 130 N ? ? A MSE 160 A MSE 161 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale17 covale both ? A MSE 130 C ? ? ? 1_555 A PRO 131 N ? ? A MSE 161 A PRO 162 1_555 ? ? ? ? ? ? ? 1.368 ? ? covale18 covale both ? A ASN 168 C ? ? ? 1_555 A MSE 169 N ? ? A ASN 199 A MSE 200 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale19 covale both ? A MSE 169 C ? ? ? 1_555 A GLU 170 N ? ? A MSE 200 A GLU 201 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale20 covale both ? A PHE 191 C ? ? ? 1_555 A MSE 192 N ? ? A PHE 222 A MSE 223 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale21 covale both ? A MSE 192 C ? ? ? 1_555 A LYS 193 N ? ? A MSE 223 A LYS 224 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale22 covale both ? A LEU 201 C ? ? ? 1_555 A MSE 202 N ? ? A LEU 232 A MSE 233 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale23 covale both ? A MSE 202 C ? ? ? 1_555 A LEU 203 N ? ? A MSE 233 A LEU 234 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale24 covale both ? A GLU 214 C ? ? ? 1_555 A MSE 215 N ? ? A GLU 245 A MSE 246 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale25 covale both ? A MSE 215 C ? ? ? 1_555 A ASP 216 N ? ? A MSE 246 A ASP 247 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale26 covale both ? A VAL 221 C ? ? ? 1_555 A MSE 222 N ? ? A VAL 252 A MSE 253 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale27 covale both ? A MSE 222 C ? ? ? 1_555 A GLY 223 N ? ? A MSE 253 A GLY 254 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale28 covale both ? A TYR 230 C ? ? ? 1_555 A MSE 231 N A ? A TYR 261 A MSE 262 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale29 covale both ? A TYR 230 C ? ? ? 1_555 A MSE 231 N B ? A TYR 261 A MSE 262 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale30 covale both ? A MSE 231 C A ? ? 1_555 A GLN 232 N ? ? A MSE 262 A GLN 263 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale31 covale both ? A MSE 231 C B ? ? 1_555 A GLN 232 N ? ? A MSE 262 A GLN 263 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale32 covale both ? A GLY 253 C ? ? ? 1_555 A MSE 254 N ? ? A GLY 284 A MSE 285 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale33 covale both ? A MSE 254 C ? ? ? 1_555 A MSE 255 N ? ? A MSE 285 A MSE 286 1_555 ? ? ? ? ? ? ? 1.302 ? ? covale34 covale both ? A MSE 255 C ? ? ? 1_555 A ASN 256 N ? ? A MSE 286 A ASN 287 1_555 ? ? ? ? ? ? ? 1.314 ? ? covale35 covale both ? A GLU 258 C ? ? ? 1_555 A MSE 259 N ? ? A GLU 289 A MSE 290 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale36 covale both ? A MSE 259 C ? ? ? 1_555 A ILE 260 N ? ? A MSE 290 A ILE 291 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale37 covale both ? A GLN 263 C ? ? ? 1_555 A MSE 264 N ? ? A GLN 294 A MSE 295 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale38 covale both ? A MSE 264 C ? ? ? 1_555 A TYR 265 N ? ? A MSE 295 A TYR 296 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale39 covale both ? A GLN 278 C ? ? ? 1_555 A MSE 279 N ? ? A GLN 309 A MSE 310 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale40 covale both ? A MSE 279 C ? ? ? 1_555 A PRO 280 N ? ? A MSE 310 A PRO 311 1_555 ? ? ? ? ? ? ? 1.341 ? ? metalc1 metalc ? ? B MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 1 A HOH 14 1_555 ? ? ? ? ? ? ? 2.129 ? ? metalc2 metalc ? ? B MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 1 A HOH 15 1_555 ? ? ? ? ? ? ? 2.366 ? ? metalc3 metalc ? ? B MG . MG ? ? ? 1_555 A ASP 216 OD2 ? ? A MG 1 A ASP 247 1_555 ? ? ? ? ? ? ? 1.986 ? ? metalc4 metalc ? ? B MG . MG ? ? ? 1_555 A GLU 275 OE1 ? ? A MG 1 A GLU 306 1_555 ? ? ? ? ? ? ? 1.990 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 9 ? B ? 3 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel A 7 8 ? parallel A 8 9 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 16 ? GLN A 18 ? GLY A 47 GLN A 49 A 2 LYS A 45 ? LEU A 48 ? LYS A 76 LEU A 79 A 3 LYS A 74 ? HIS A 79 ? LYS A 105 HIS A 110 A 4 TYR A 124 ? GLN A 127 ? TYR A 155 GLN A 158 A 5 PHE A 162 ? HIS A 165 ? PHE A 193 HIS A 196 A 6 VAL A 211 ? ASP A 216 ? VAL A 242 ASP A 247 A 7 ILE A 238 ? ILE A 243 ? ILE A 269 ILE A 274 A 8 TYR A 272 ? VAL A 274 ? TYR A 303 VAL A 305 A 9 GLY A 16 ? GLN A 18 ? GLY A 47 GLN A 49 B 1 TYR A 51 ? GLY A 52 ? TYR A 82 GLY A 83 B 2 ALA A 55 ? ILE A 56 ? ALA A 86 ILE A 87 B 3 VAL A 59 ? PRO A 60 ? VAL A 90 PRO A 91 C 1 ARG A 173 ? VAL A 174 ? ARG A 204 VAL A 205 C 2 ASP A 196 ? GLN A 197 ? ASP A 227 GLN A 228 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 17 ? N LEU A 48 O LYS A 45 ? O LYS A 76 A 2 3 N LEU A 46 ? N LEU A 77 O LYS A 74 ? O LYS A 105 A 3 4 N SER A 78 ? N SER A 109 O ILE A 126 ? O ILE A 157 A 4 5 N GLN A 127 ? N GLN A 158 O HIS A 165 ? O HIS A 196 A 5 6 N TYR A 164 ? N TYR A 195 O GLU A 214 ? O GLU A 245 A 6 7 N MSE A 215 ? N MSE A 246 O HIS A 242 ? O HIS A 273 A 7 8 N ILE A 243 ? N ILE A 274 O PHE A 273 ? O PHE A 304 A 8 9 O VAL A 274 ? O VAL A 305 N GLN A 18 ? N GLN A 49 B 1 2 N GLY A 52 ? N GLY A 83 O ALA A 55 ? O ALA A 86 B 2 3 N ILE A 56 ? N ILE A 87 O VAL A 59 ? O VAL A 90 C 1 2 N VAL A 174 ? N VAL A 205 O ASP A 196 ? O ASP A 227 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 1 ? 6 'BINDING SITE FOR RESIDUE MG A 1' AC2 Software A EDO 2 ? 2 'BINDING SITE FOR RESIDUE EDO A 2' AC3 Software A EDO 3 ? 3 'BINDING SITE FOR RESIDUE EDO A 3' AC4 Software A EDO 4 ? 5 'BINDING SITE FOR RESIDUE EDO A 4' AC5 Software A EDO 5 ? 5 'BINDING SITE FOR RESIDUE EDO A 5' AC6 Software A EDO 6 ? 5 'BINDING SITE FOR RESIDUE EDO A 6' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 HOH H . ? HOH A 14 . ? 1_555 ? 2 AC1 6 HOH H . ? HOH A 15 . ? 1_555 ? 3 AC1 6 HIS A 165 ? HIS A 196 . ? 1_555 ? 4 AC1 6 ASP A 216 ? ASP A 247 . ? 1_555 ? 5 AC1 6 HIS A 242 ? HIS A 273 . ? 1_555 ? 6 AC1 6 GLU A 275 ? GLU A 306 . ? 1_555 ? 7 AC2 2 ASP A 40 ? ASP A 71 . ? 1_555 ? 8 AC2 2 MSE A 41 ? MSE A 72 . ? 1_555 ? 9 AC3 3 EDO G . ? EDO A 6 . ? 3_445 ? 10 AC3 3 LYS A 210 ? LYS A 241 . ? 3_445 ? 11 AC3 3 LYS A 290 ? LYS A 321 . ? 1_555 ? 12 AC4 5 TYR A 51 ? TYR A 82 . ? 1_555 ? 13 AC4 5 GLY A 52 ? GLY A 83 . ? 1_555 ? 14 AC4 5 LYS A 53 ? LYS A 84 . ? 1_555 ? 15 AC4 5 TYR A 109 ? TYR A 140 . ? 1_555 ? 16 AC4 5 THR A 113 ? THR A 144 . ? 1_555 ? 17 AC5 5 GLU A 14 ? GLU A 45 . ? 1_555 ? 18 AC5 5 GLY A 16 ? GLY A 47 . ? 1_555 ? 19 AC5 5 LYS A 45 ? LYS A 76 . ? 1_555 ? 20 AC5 5 ASP A 271 ? ASP A 302 . ? 1_555 ? 21 AC5 5 TYR A 272 ? TYR A 303 . ? 1_555 ? 22 AC6 5 EDO D . ? EDO A 3 . ? 3_555 ? 23 AC6 5 ASN A 147 ? ASN A 178 . ? 1_555 ? 24 AC6 5 ASP A 151 ? ASP A 182 . ? 1_555 ? 25 AC6 5 LYS A 210 ? LYS A 241 . ? 1_555 ? 26 AC6 5 HOH H . ? HOH A 460 . ? 3_555 ? # _atom_sites.entry_id 3L23 _atom_sites.fract_transf_matrix[1][1] 0.012877 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002967 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017657 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013125 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C MG N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 ALA 2 33 ? ? ? A . n A 1 3 LEU 3 34 ? ? ? A . n A 1 4 GLY 4 35 ? ? ? A . n A 1 5 VAL 5 36 ? ? ? A . n A 1 6 VAL 6 37 ? ? ? A . n A 1 7 ASP 7 38 ? ? ? A . n A 1 8 GLU 8 39 ? ? ? A . n A 1 9 VAL 9 40 ? ? ? A . n A 1 10 HIS 10 41 ? ? ? A . n A 1 11 ALA 11 42 ? ? ? A . n A 1 12 GLY 12 43 43 GLY GLY A . n A 1 13 LYS 13 44 44 LYS LYS A . n A 1 14 GLU 14 45 45 GLU GLU A . n A 1 15 ILE 15 46 46 ILE ILE A . n A 1 16 GLY 16 47 47 GLY GLY A . n A 1 17 LEU 17 48 48 LEU LEU A . n A 1 18 GLN 18 49 49 GLN GLN A . n A 1 19 ILE 19 50 50 ILE ILE A . n A 1 20 TYR 20 51 51 TYR TYR A . n A 1 21 SER 21 52 52 SER SER A . n A 1 22 LEU 22 53 53 LEU LEU A . n A 1 23 SER 23 54 54 SER SER A . n A 1 24 GLN 24 55 55 GLN GLN A . n A 1 25 GLU 25 56 56 GLU GLU A . n A 1 26 LEU 26 57 57 LEU LEU A . n A 1 27 TYR 27 58 58 TYR TYR A . n A 1 28 LYS 28 59 59 LYS LYS A . n A 1 29 GLY 29 60 60 GLY GLY A . n A 1 30 ASP 30 61 61 ASP ASP A . n A 1 31 VAL 31 62 62 VAL VAL A . n A 1 32 ALA 32 63 63 ALA ALA A . n A 1 33 ALA 33 64 64 ALA ALA A . n A 1 34 ASN 34 65 65 ASN ASN A . n A 1 35 LEU 35 66 66 LEU LEU A . n A 1 36 ARG 36 67 67 ARG ARG A . n A 1 37 LYS 37 68 68 LYS LYS A . n A 1 38 VAL 38 69 69 VAL VAL A . n A 1 39 LYS 39 70 70 LYS LYS A . n A 1 40 ASP 40 71 71 ASP ASP A . n A 1 41 MSE 41 72 72 MSE MSE A . n A 1 42 GLY 42 73 73 GLY GLY A . n A 1 43 TYR 43 74 74 TYR TYR A . n A 1 44 SER 44 75 75 SER SER A . n A 1 45 LYS 45 76 76 LYS LYS A . n A 1 46 LEU 46 77 77 LEU LEU A . n A 1 47 GLU 47 78 78 GLU GLU A . n A 1 48 LEU 48 79 79 LEU LEU A . n A 1 49 ALA 49 80 80 ALA ALA A . n A 1 50 GLY 50 81 81 GLY GLY A . n A 1 51 TYR 51 82 82 TYR TYR A . n A 1 52 GLY 52 83 83 GLY GLY A . n A 1 53 LYS 53 84 84 LYS LYS A . n A 1 54 GLY 54 85 85 GLY GLY A . n A 1 55 ALA 55 86 86 ALA ALA A . n A 1 56 ILE 56 87 87 ILE ILE A . n A 1 57 GLY 57 88 88 GLY GLY A . n A 1 58 GLY 58 89 89 GLY GLY A . n A 1 59 VAL 59 90 90 VAL VAL A . n A 1 60 PRO 60 91 91 PRO PRO A . n A 1 61 MSE 61 92 92 MSE MSE A . n A 1 62 MSE 62 93 93 MSE MSE A . n A 1 63 ASP 63 94 94 ASP ASP A . n A 1 64 PHE 64 95 95 PHE PHE A . n A 1 65 LYS 65 96 96 LYS LYS A . n A 1 66 LYS 66 97 97 LYS LYS A . n A 1 67 MSE 67 98 98 MSE MSE A . n A 1 68 ALA 68 99 99 ALA ALA A . n A 1 69 GLU 69 100 100 GLU GLU A . n A 1 70 ASP 70 101 101 ASP ASP A . n A 1 71 ALA 71 102 102 ALA ALA A . n A 1 72 GLY 72 103 103 GLY GLY A . n A 1 73 LEU 73 104 104 LEU LEU A . n A 1 74 LYS 74 105 105 LYS LYS A . n A 1 75 ILE 75 106 106 ILE ILE A . n A 1 76 ILE 76 107 107 ILE ILE A . n A 1 77 SER 77 108 108 SER SER A . n A 1 78 SER 78 109 109 SER SER A . n A 1 79 HIS 79 110 110 HIS HIS A . n A 1 80 VAL 80 111 111 VAL VAL A . n A 1 81 ASN 81 112 112 ASN ASN A . n A 1 82 PRO 82 113 113 PRO PRO A . n A 1 83 VAL 83 114 114 VAL VAL A . n A 1 84 ASP 84 115 115 ASP ASP A . n A 1 85 THR 85 116 116 THR THR A . n A 1 86 SER 86 117 117 SER SER A . n A 1 87 ILE 87 118 118 ILE ILE A . n A 1 88 SER 88 119 119 SER SER A . n A 1 89 ASP 89 120 120 ASP ASP A . n A 1 90 PRO 90 121 121 PRO PRO A . n A 1 91 PHE 91 122 122 PHE PHE A . n A 1 92 LYS 92 123 123 LYS LYS A . n A 1 93 ALA 93 124 124 ALA ALA A . n A 1 94 MSE 94 125 125 MSE MSE A . n A 1 95 ILE 95 126 126 ILE ILE A . n A 1 96 PHE 96 127 127 PHE PHE A . n A 1 97 LYS 97 128 128 LYS LYS A . n A 1 98 TYR 98 129 129 TYR TYR A . n A 1 99 SER 99 130 130 SER SER A . n A 1 100 LYS 100 131 131 LYS LYS A . n A 1 101 GLU 101 132 132 GLU GLU A . n A 1 102 VAL 102 133 133 VAL VAL A . n A 1 103 THR 103 134 134 THR THR A . n A 1 104 PRO 104 135 135 PRO PRO A . n A 1 105 LYS 105 136 136 LYS LYS A . n A 1 106 ILE 106 137 137 ILE ILE A . n A 1 107 MSE 107 138 138 MSE MSE A . n A 1 108 GLU 108 139 139 GLU GLU A . n A 1 109 TYR 109 140 140 TYR TYR A . n A 1 110 TRP 110 141 141 TRP TRP A . n A 1 111 LYS 111 142 142 LYS LYS A . n A 1 112 ALA 112 143 143 ALA ALA A . n A 1 113 THR 113 144 144 THR THR A . n A 1 114 ALA 114 145 145 ALA ALA A . n A 1 115 ALA 115 146 146 ALA ALA A . n A 1 116 ASP 116 147 147 ASP ASP A . n A 1 117 HIS 117 148 148 HIS HIS A . n A 1 118 ALA 118 149 149 ALA ALA A . n A 1 119 LYS 119 150 150 LYS LYS A . n A 1 120 LEU 120 151 151 LEU LEU A . n A 1 121 GLY 121 152 152 GLY GLY A . n A 1 122 CYS 122 153 153 CYS CYS A . n A 1 123 LYS 123 154 154 LYS LYS A . n A 1 124 TYR 124 155 155 TYR TYR A . n A 1 125 LEU 125 156 156 LEU LEU A . n A 1 126 ILE 126 157 157 ILE ILE A . n A 1 127 GLN 127 158 158 GLN GLN A . n A 1 128 PRO 128 159 159 PRO PRO A . n A 1 129 MSE 129 160 160 MSE MSE A . n A 1 130 MSE 130 161 161 MSE MSE A . n A 1 131 PRO 131 162 162 PRO PRO A . n A 1 132 THR 132 163 163 THR THR A . n A 1 133 ILE 133 164 164 ILE ILE A . n A 1 134 THR 134 165 165 THR THR A . n A 1 135 THR 135 166 166 THR THR A . n A 1 136 HIS 136 167 167 HIS HIS A . n A 1 137 ASP 137 168 168 ASP ASP A . n A 1 138 GLU 138 169 169 GLU GLU A . n A 1 139 ALA 139 170 170 ALA ALA A . n A 1 140 LYS 140 171 171 LYS LYS A . n A 1 141 LEU 141 172 172 LEU LEU A . n A 1 142 VAL 142 173 173 VAL VAL A . n A 1 143 CYS 143 174 174 CYS CYS A . n A 1 144 ASP 144 175 175 ASP ASP A . n A 1 145 ILE 145 176 176 ILE ILE A . n A 1 146 PHE 146 177 177 PHE PHE A . n A 1 147 ASN 147 178 178 ASN ASN A . n A 1 148 GLN 148 179 179 GLN GLN A . n A 1 149 ALA 149 180 180 ALA ALA A . n A 1 150 SER 150 181 181 SER SER A . n A 1 151 ASP 151 182 182 ASP ASP A . n A 1 152 VAL 152 183 183 VAL VAL A . n A 1 153 ILE 153 184 184 ILE ILE A . n A 1 154 LYS 154 185 185 LYS LYS A . n A 1 155 ALA 155 186 186 ALA ALA A . n A 1 156 GLU 156 187 187 GLU GLU A . n A 1 157 GLY 157 188 188 GLY GLY A . n A 1 158 ILE 158 189 189 ILE ILE A . n A 1 159 ALA 159 190 190 ALA ALA A . n A 1 160 THR 160 191 191 THR THR A . n A 1 161 GLY 161 192 192 GLY GLY A . n A 1 162 PHE 162 193 193 PHE PHE A . n A 1 163 GLY 163 194 194 GLY GLY A . n A 1 164 TYR 164 195 195 TYR TYR A . n A 1 165 HIS 165 196 196 HIS HIS A . n A 1 166 ASN 166 197 197 ASN ASN A . n A 1 167 HIS 167 198 198 HIS HIS A . n A 1 168 ASN 168 199 199 ASN ASN A . n A 1 169 MSE 169 200 200 MSE MSE A . n A 1 170 GLU 170 201 201 GLU GLU A . n A 1 171 PHE 171 202 202 PHE PHE A . n A 1 172 ASN 172 203 203 ASN ASN A . n A 1 173 ARG 173 204 204 ARG ARG A . n A 1 174 VAL 174 205 205 VAL VAL A . n A 1 175 ALA 175 206 206 ALA ALA A . n A 1 176 THR 176 207 207 THR THR A . n A 1 177 LYS 177 208 208 LYS LYS A . n A 1 178 GLU 178 209 209 GLU GLU A . n A 1 179 GLN 179 210 210 GLN GLN A . n A 1 180 GLN 180 211 211 GLN GLN A . n A 1 181 GLU 181 212 ? ? ? A . n A 1 182 LYS 182 213 ? ? ? A . n A 1 183 VAL 183 214 ? ? ? A . n A 1 184 LYS 184 215 ? ? ? A . n A 1 185 GLY 185 216 ? ? ? A . n A 1 186 ASN 186 217 ? ? ? A . n A 1 187 PRO 187 218 ? ? ? A . n A 1 188 PHE 188 219 ? ? ? A . n A 1 189 ALA 189 220 ? ? ? A . n A 1 190 ALA 190 221 ? ? ? A . n A 1 191 PHE 191 222 222 PHE PHE A . n A 1 192 MSE 192 223 223 MSE MSE A . n A 1 193 LYS 193 224 224 LYS LYS A . n A 1 194 VAL 194 225 225 VAL VAL A . n A 1 195 GLY 195 226 226 GLY GLY A . n A 1 196 ASP 196 227 227 ASP ASP A . n A 1 197 GLN 197 228 228 GLN GLN A . n A 1 198 ILE 198 229 229 ILE ILE A . n A 1 199 TYR 199 230 230 TYR TYR A . n A 1 200 ASP 200 231 231 ASP ASP A . n A 1 201 LEU 201 232 232 LEU LEU A . n A 1 202 MSE 202 233 233 MSE MSE A . n A 1 203 LEU 203 234 234 LEU LEU A . n A 1 204 LYS 204 235 235 LYS LYS A . n A 1 205 ASP 205 236 236 ASP ASP A . n A 1 206 THR 206 237 237 THR THR A . n A 1 207 ASP 207 238 238 ASP ASP A . n A 1 208 PRO 208 239 239 PRO PRO A . n A 1 209 SER 209 240 240 SER SER A . n A 1 210 LYS 210 241 241 LYS LYS A . n A 1 211 VAL 211 242 242 VAL VAL A . n A 1 212 TYR 212 243 243 TYR TYR A . n A 1 213 PHE 213 244 244 PHE PHE A . n A 1 214 GLU 214 245 245 GLU GLU A . n A 1 215 MSE 215 246 246 MSE MSE A . n A 1 216 ASP 216 247 247 ASP ASP A . n A 1 217 VAL 217 248 248 VAL VAL A . n A 1 218 TYR 218 249 249 TYR TYR A . n A 1 219 TRP 219 250 250 TRP TRP A . n A 1 220 THR 220 251 251 THR THR A . n A 1 221 VAL 221 252 252 VAL VAL A . n A 1 222 MSE 222 253 253 MSE MSE A . n A 1 223 GLY 223 254 254 GLY GLY A . n A 1 224 GLN 224 255 255 GLN GLN A . n A 1 225 ASN 225 256 256 ASN ASN A . n A 1 226 ASP 226 257 257 ASP ASP A . n A 1 227 PRO 227 258 258 PRO PRO A . n A 1 228 VAL 228 259 259 VAL VAL A . n A 1 229 GLU 229 260 260 GLU GLU A . n A 1 230 TYR 230 261 261 TYR TYR A . n A 1 231 MSE 231 262 262 MSE MSE A . n A 1 232 GLN 232 263 263 GLN GLN A . n A 1 233 LYS 233 264 264 LYS LYS A . n A 1 234 HIS 234 265 265 HIS HIS A . n A 1 235 PRO 235 266 266 PRO PRO A . n A 1 236 ASP 236 267 267 ASP ASP A . n A 1 237 ARG 237 268 268 ARG ARG A . n A 1 238 ILE 238 269 269 ILE ILE A . n A 1 239 LYS 239 270 270 LYS LYS A . n A 1 240 VAL 240 271 271 VAL VAL A . n A 1 241 LEU 241 272 272 LEU LEU A . n A 1 242 HIS 242 273 273 HIS HIS A . n A 1 243 ILE 243 274 274 ILE ILE A . n A 1 244 LYS 244 275 275 LYS LYS A . n A 1 245 ASP 245 276 276 ASP ASP A . n A 1 246 ARG 246 277 277 ARG ARG A . n A 1 247 ALA 247 278 278 ALA ALA A . n A 1 248 VAL 248 279 279 VAL VAL A . n A 1 249 PHE 249 280 280 PHE PHE A . n A 1 250 GLY 250 281 281 GLY GLY A . n A 1 251 GLN 251 282 282 GLN GLN A . n A 1 252 SER 252 283 283 SER SER A . n A 1 253 GLY 253 284 284 GLY GLY A . n A 1 254 MSE 254 285 285 MSE MSE A . n A 1 255 MSE 255 286 286 MSE MSE A . n A 1 256 ASN 256 287 287 ASN ASN A . n A 1 257 PHE 257 288 288 PHE PHE A . n A 1 258 GLU 258 289 289 GLU GLU A . n A 1 259 MSE 259 290 290 MSE MSE A . n A 1 260 ILE 260 291 291 ILE ILE A . n A 1 261 PHE 261 292 292 PHE PHE A . n A 1 262 LYS 262 293 293 LYS LYS A . n A 1 263 GLN 263 294 294 GLN GLN A . n A 1 264 MSE 264 295 295 MSE MSE A . n A 1 265 TYR 265 296 296 TYR TYR A . n A 1 266 ALA 266 297 297 ALA ALA A . n A 1 267 ASN 267 298 298 ASN ASN A . n A 1 268 GLY 268 299 299 GLY GLY A . n A 1 269 ILE 269 300 300 ILE ILE A . n A 1 270 LYS 270 301 301 LYS LYS A . n A 1 271 ASP 271 302 302 ASP ASP A . n A 1 272 TYR 272 303 303 TYR TYR A . n A 1 273 PHE 273 304 304 PHE PHE A . n A 1 274 VAL 274 305 305 VAL VAL A . n A 1 275 GLU 275 306 306 GLU GLU A . n A 1 276 LEU 276 307 307 LEU LEU A . n A 1 277 GLU 277 308 308 GLU GLU A . n A 1 278 GLN 278 309 309 GLN GLN A . n A 1 279 MSE 279 310 310 MSE MSE A . n A 1 280 PRO 280 311 311 PRO PRO A . n A 1 281 ASP 281 312 312 ASP ASP A . n A 1 282 GLY 282 313 313 GLY GLY A . n A 1 283 ARG 283 314 314 ARG ARG A . n A 1 284 THR 284 315 315 THR THR A . n A 1 285 GLN 285 316 316 GLN GLN A . n A 1 286 PHE 286 317 317 PHE PHE A . n A 1 287 ALA 287 318 318 ALA ALA A . n A 1 288 GLY 288 319 319 GLY GLY A . n A 1 289 VAL 289 320 320 VAL VAL A . n A 1 290 LYS 290 321 321 LYS LYS A . n A 1 291 ASP 291 322 322 ASP ASP A . n A 1 292 CYS 292 323 323 CYS CYS A . n A 1 293 ALA 293 324 324 ALA ALA A . n A 1 294 ASP 294 325 325 ASP ASP A . n A 1 295 TYR 295 326 326 TYR TYR A . n A 1 296 LEU 296 327 327 LEU LEU A . n A 1 297 ILE 297 328 328 ILE ILE A . n A 1 298 LYS 298 329 329 LYS LYS A . n A 1 299 ALA 299 330 330 ALA ALA A . n A 1 300 PRO 300 331 331 PRO PRO A . n A 1 301 PHE 301 332 332 PHE PHE A . n A 1 302 VAL 302 333 333 VAL VAL A . n A 1 303 LYS 303 334 334 LYS LYS A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 1 1 MG MG A . C 3 EDO 1 2 2 EDO EDO A . D 3 EDO 1 3 3 EDO EDO A . E 3 EDO 1 4 4 EDO EDO A . F 3 EDO 1 5 5 EDO EDO A . G 3 EDO 1 6 6 EDO EDO A . H 4 HOH 1 7 7 HOH HOH A . H 4 HOH 2 8 8 HOH HOH A . H 4 HOH 3 9 9 HOH HOH A . H 4 HOH 4 10 10 HOH HOH A . H 4 HOH 5 11 11 HOH HOH A . H 4 HOH 6 12 12 HOH HOH A . H 4 HOH 7 13 13 HOH HOH A . H 4 HOH 8 14 14 HOH HOH A . H 4 HOH 9 15 15 HOH HOH A . H 4 HOH 10 16 16 HOH HOH A . H 4 HOH 11 17 17 HOH HOH A . H 4 HOH 12 18 18 HOH HOH A . H 4 HOH 13 19 19 HOH HOH A . H 4 HOH 14 20 20 HOH HOH A . H 4 HOH 15 21 21 HOH HOH A . H 4 HOH 16 22 22 HOH HOH A . H 4 HOH 17 23 23 HOH HOH A . H 4 HOH 18 24 24 HOH HOH A . H 4 HOH 19 25 25 HOH HOH A . H 4 HOH 20 26 26 HOH HOH A . H 4 HOH 21 27 27 HOH HOH A . H 4 HOH 22 28 28 HOH HOH A . H 4 HOH 23 29 29 HOH HOH A . H 4 HOH 24 30 30 HOH HOH A . H 4 HOH 25 31 31 HOH HOH A . H 4 HOH 26 335 32 HOH HOH A . H 4 HOH 27 336 33 HOH HOH A . H 4 HOH 28 337 34 HOH HOH A . H 4 HOH 29 338 35 HOH HOH A . H 4 HOH 30 339 36 HOH HOH A . H 4 HOH 31 340 37 HOH HOH A . H 4 HOH 32 341 38 HOH HOH A . H 4 HOH 33 342 39 HOH HOH A . H 4 HOH 34 343 40 HOH HOH A . H 4 HOH 35 344 41 HOH HOH A . H 4 HOH 36 345 42 HOH HOH A . H 4 HOH 37 346 43 HOH HOH A . H 4 HOH 38 347 44 HOH HOH A . H 4 HOH 39 348 45 HOH HOH A . H 4 HOH 40 349 46 HOH HOH A . H 4 HOH 41 350 47 HOH HOH A . H 4 HOH 42 351 48 HOH HOH A . H 4 HOH 43 352 49 HOH HOH A . H 4 HOH 44 353 50 HOH HOH A . H 4 HOH 45 354 51 HOH HOH A . H 4 HOH 46 355 52 HOH HOH A . H 4 HOH 47 356 53 HOH HOH A . H 4 HOH 48 357 54 HOH HOH A . H 4 HOH 49 358 55 HOH HOH A . H 4 HOH 50 359 56 HOH HOH A . H 4 HOH 51 360 57 HOH HOH A . H 4 HOH 52 361 58 HOH HOH A . H 4 HOH 53 362 59 HOH HOH A . H 4 HOH 54 363 60 HOH HOH A . H 4 HOH 55 364 61 HOH HOH A . H 4 HOH 56 365 62 HOH HOH A . H 4 HOH 57 366 63 HOH HOH A . H 4 HOH 58 367 64 HOH HOH A . H 4 HOH 59 368 65 HOH HOH A . H 4 HOH 60 369 66 HOH HOH A . H 4 HOH 61 370 67 HOH HOH A . H 4 HOH 62 371 68 HOH HOH A . H 4 HOH 63 372 69 HOH HOH A . H 4 HOH 64 373 70 HOH HOH A . H 4 HOH 65 374 71 HOH HOH A . H 4 HOH 66 375 72 HOH HOH A . H 4 HOH 67 376 73 HOH HOH A . H 4 HOH 68 377 74 HOH HOH A . H 4 HOH 69 378 75 HOH HOH A . H 4 HOH 70 379 76 HOH HOH A . H 4 HOH 71 380 77 HOH HOH A . H 4 HOH 72 381 78 HOH HOH A . H 4 HOH 73 382 79 HOH HOH A . H 4 HOH 74 383 80 HOH HOH A . H 4 HOH 75 384 81 HOH HOH A . H 4 HOH 76 385 82 HOH HOH A . H 4 HOH 77 386 83 HOH HOH A . H 4 HOH 78 387 84 HOH HOH A . H 4 HOH 79 388 85 HOH HOH A . H 4 HOH 80 389 86 HOH HOH A . H 4 HOH 81 390 87 HOH HOH A . H 4 HOH 82 391 88 HOH HOH A . H 4 HOH 83 392 89 HOH HOH A . H 4 HOH 84 393 90 HOH HOH A . H 4 HOH 85 394 91 HOH HOH A . H 4 HOH 86 395 92 HOH HOH A . H 4 HOH 87 396 93 HOH HOH A . H 4 HOH 88 397 94 HOH HOH A . H 4 HOH 89 398 95 HOH HOH A . H 4 HOH 90 399 96 HOH HOH A . H 4 HOH 91 400 97 HOH HOH A . H 4 HOH 92 401 98 HOH HOH A . H 4 HOH 93 402 99 HOH HOH A . H 4 HOH 94 403 100 HOH HOH A . H 4 HOH 95 404 101 HOH HOH A . H 4 HOH 96 405 102 HOH HOH A . H 4 HOH 97 406 103 HOH HOH A . H 4 HOH 98 407 104 HOH HOH A . H 4 HOH 99 408 105 HOH HOH A . H 4 HOH 100 409 106 HOH HOH A . H 4 HOH 101 410 107 HOH HOH A . H 4 HOH 102 411 108 HOH HOH A . H 4 HOH 103 412 109 HOH HOH A . H 4 HOH 104 413 110 HOH HOH A . H 4 HOH 105 414 111 HOH HOH A . H 4 HOH 106 415 112 HOH HOH A . H 4 HOH 107 416 113 HOH HOH A . H 4 HOH 108 417 114 HOH HOH A . H 4 HOH 109 418 115 HOH HOH A . H 4 HOH 110 419 116 HOH HOH A . H 4 HOH 111 420 117 HOH HOH A . H 4 HOH 112 421 118 HOH HOH A . H 4 HOH 113 422 119 HOH HOH A . H 4 HOH 114 423 120 HOH HOH A . H 4 HOH 115 424 121 HOH HOH A . H 4 HOH 116 425 122 HOH HOH A . H 4 HOH 117 426 123 HOH HOH A . H 4 HOH 118 427 124 HOH HOH A . H 4 HOH 119 428 125 HOH HOH A . H 4 HOH 120 429 126 HOH HOH A . H 4 HOH 121 430 127 HOH HOH A . H 4 HOH 122 431 128 HOH HOH A . H 4 HOH 123 432 129 HOH HOH A . H 4 HOH 124 433 130 HOH HOH A . H 4 HOH 125 434 131 HOH HOH A . H 4 HOH 126 435 132 HOH HOH A . H 4 HOH 127 436 133 HOH HOH A . H 4 HOH 128 437 134 HOH HOH A . H 4 HOH 129 438 135 HOH HOH A . H 4 HOH 130 439 136 HOH HOH A . H 4 HOH 131 440 137 HOH HOH A . H 4 HOH 132 441 138 HOH HOH A . H 4 HOH 133 442 139 HOH HOH A . H 4 HOH 134 443 140 HOH HOH A . H 4 HOH 135 444 141 HOH HOH A . H 4 HOH 136 445 142 HOH HOH A . H 4 HOH 137 446 143 HOH HOH A . H 4 HOH 138 447 144 HOH HOH A . H 4 HOH 139 448 145 HOH HOH A . H 4 HOH 140 449 146 HOH HOH A . H 4 HOH 141 450 147 HOH HOH A . H 4 HOH 142 451 148 HOH HOH A . H 4 HOH 143 452 149 HOH HOH A . H 4 HOH 144 453 150 HOH HOH A . H 4 HOH 145 454 151 HOH HOH A . H 4 HOH 146 455 152 HOH HOH A . H 4 HOH 147 456 153 HOH HOH A . H 4 HOH 148 457 154 HOH HOH A . H 4 HOH 149 458 155 HOH HOH A . H 4 HOH 150 459 156 HOH HOH A . H 4 HOH 151 460 157 HOH HOH A . H 4 HOH 152 461 158 HOH HOH A . H 4 HOH 153 462 159 HOH HOH A . H 4 HOH 154 463 160 HOH HOH A . H 4 HOH 155 464 161 HOH HOH A . H 4 HOH 156 465 162 HOH HOH A . H 4 HOH 157 466 163 HOH HOH A . H 4 HOH 158 467 164 HOH HOH A . H 4 HOH 159 468 165 HOH HOH A . H 4 HOH 160 469 166 HOH HOH A . H 4 HOH 161 470 167 HOH HOH A . H 4 HOH 162 471 168 HOH HOH A . H 4 HOH 163 472 169 HOH HOH A . H 4 HOH 164 473 170 HOH HOH A . H 4 HOH 165 474 171 HOH HOH A . H 4 HOH 166 475 172 HOH HOH A . H 4 HOH 167 476 173 HOH HOH A . H 4 HOH 168 477 174 HOH HOH A . H 4 HOH 169 478 175 HOH HOH A . H 4 HOH 170 479 176 HOH HOH A . H 4 HOH 171 480 177 HOH HOH A . H 4 HOH 172 481 178 HOH HOH A . H 4 HOH 173 482 179 HOH HOH A . H 4 HOH 174 483 180 HOH HOH A . H 4 HOH 175 484 181 HOH HOH A . H 4 HOH 176 485 182 HOH HOH A . H 4 HOH 177 486 183 HOH HOH A . H 4 HOH 178 487 184 HOH HOH A . H 4 HOH 179 488 185 HOH HOH A . H 4 HOH 180 489 186 HOH HOH A . H 4 HOH 181 490 187 HOH HOH A . H 4 HOH 182 491 188 HOH HOH A . H 4 HOH 183 492 189 HOH HOH A . H 4 HOH 184 493 190 HOH HOH A . H 4 HOH 185 494 191 HOH HOH A . H 4 HOH 186 495 192 HOH HOH A . H 4 HOH 187 496 193 HOH HOH A . H 4 HOH 188 497 194 HOH HOH A . H 4 HOH 189 498 195 HOH HOH A . H 4 HOH 190 499 196 HOH HOH A . H 4 HOH 191 500 197 HOH HOH A . H 4 HOH 192 501 198 HOH HOH A . H 4 HOH 193 502 199 HOH HOH A . H 4 HOH 194 503 200 HOH HOH A . H 4 HOH 195 504 201 HOH HOH A . H 4 HOH 196 505 202 HOH HOH A . H 4 HOH 197 506 203 HOH HOH A . H 4 HOH 198 507 204 HOH HOH A . H 4 HOH 199 508 205 HOH HOH A . H 4 HOH 200 509 206 HOH HOH A . H 4 HOH 201 510 207 HOH HOH A . H 4 HOH 202 511 208 HOH HOH A . H 4 HOH 203 512 209 HOH HOH A . H 4 HOH 204 513 210 HOH HOH A . H 4 HOH 205 514 211 HOH HOH A . H 4 HOH 206 515 212 HOH HOH A . H 4 HOH 207 516 213 HOH HOH A . H 4 HOH 208 517 214 HOH HOH A . H 4 HOH 209 518 215 HOH HOH A . H 4 HOH 210 519 216 HOH HOH A . H 4 HOH 211 520 217 HOH HOH A . H 4 HOH 212 521 218 HOH HOH A . H 4 HOH 213 522 219 HOH HOH A . H 4 HOH 214 523 220 HOH HOH A . H 4 HOH 215 524 221 HOH HOH A . H 4 HOH 216 525 222 HOH HOH A . H 4 HOH 217 526 223 HOH HOH A . H 4 HOH 218 527 224 HOH HOH A . H 4 HOH 219 528 225 HOH HOH A . H 4 HOH 220 529 226 HOH HOH A . H 4 HOH 221 530 227 HOH HOH A . H 4 HOH 222 531 228 HOH HOH A . H 4 HOH 223 532 229 HOH HOH A . H 4 HOH 224 533 230 HOH HOH A . H 4 HOH 225 534 231 HOH HOH A . H 4 HOH 226 535 232 HOH HOH A . H 4 HOH 227 536 233 HOH HOH A . H 4 HOH 228 537 234 HOH HOH A . H 4 HOH 229 538 235 HOH HOH A . H 4 HOH 230 539 236 HOH HOH A . H 4 HOH 231 540 237 HOH HOH A . H 4 HOH 232 541 238 HOH HOH A . H 4 HOH 233 542 239 HOH HOH A . H 4 HOH 234 543 240 HOH HOH A . H 4 HOH 235 544 241 HOH HOH A . H 4 HOH 236 545 242 HOH HOH A . H 4 HOH 237 546 243 HOH HOH A . H 4 HOH 238 547 244 HOH HOH A . H 4 HOH 239 548 245 HOH HOH A . H 4 HOH 240 549 246 HOH HOH A . H 4 HOH 241 550 247 HOH HOH A . H 4 HOH 242 551 248 HOH HOH A . H 4 HOH 243 552 249 HOH HOH A . H 4 HOH 244 553 250 HOH HOH A . H 4 HOH 245 554 251 HOH HOH A . H 4 HOH 246 555 252 HOH HOH A . H 4 HOH 247 556 253 HOH HOH A . H 4 HOH 248 557 254 HOH HOH A . H 4 HOH 249 558 255 HOH HOH A . H 4 HOH 250 559 256 HOH HOH A . H 4 HOH 251 560 257 HOH HOH A . H 4 HOH 252 561 258 HOH HOH A . H 4 HOH 253 562 259 HOH HOH A . H 4 HOH 254 563 260 HOH HOH A . H 4 HOH 255 564 261 HOH HOH A . H 4 HOH 256 565 262 HOH HOH A . H 4 HOH 257 566 263 HOH HOH A . H 4 HOH 258 567 264 HOH HOH A . H 4 HOH 259 568 265 HOH HOH A . H 4 HOH 260 569 266 HOH HOH A . H 4 HOH 261 570 267 HOH HOH A . H 4 HOH 262 571 268 HOH HOH A . H 4 HOH 263 572 269 HOH HOH A . H 4 HOH 264 573 270 HOH HOH A . H 4 HOH 265 574 271 HOH HOH A . H 4 HOH 266 575 272 HOH HOH A . H 4 HOH 267 576 273 HOH HOH A . H 4 HOH 268 577 274 HOH HOH A . H 4 HOH 269 578 275 HOH HOH A . H 4 HOH 270 579 276 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 41 A MSE 72 ? MET SELENOMETHIONINE 2 A MSE 61 A MSE 92 ? MET SELENOMETHIONINE 3 A MSE 62 A MSE 93 ? MET SELENOMETHIONINE 4 A MSE 67 A MSE 98 ? MET SELENOMETHIONINE 5 A MSE 94 A MSE 125 ? MET SELENOMETHIONINE 6 A MSE 107 A MSE 138 ? MET SELENOMETHIONINE 7 A MSE 129 A MSE 160 ? MET SELENOMETHIONINE 8 A MSE 130 A MSE 161 ? MET SELENOMETHIONINE 9 A MSE 169 A MSE 200 ? MET SELENOMETHIONINE 10 A MSE 192 A MSE 223 ? MET SELENOMETHIONINE 11 A MSE 202 A MSE 233 ? MET SELENOMETHIONINE 12 A MSE 215 A MSE 246 ? MET SELENOMETHIONINE 13 A MSE 222 A MSE 253 ? MET SELENOMETHIONINE 14 A MSE 231 A MSE 262 ? MET SELENOMETHIONINE 15 A MSE 254 A MSE 285 ? MET SELENOMETHIONINE 16 A MSE 255 A MSE 286 ? MET SELENOMETHIONINE 17 A MSE 259 A MSE 290 ? MET SELENOMETHIONINE 18 A MSE 264 A MSE 295 ? MET SELENOMETHIONINE 19 A MSE 279 A MSE 310 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H 2 1,2 A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 3180 ? 2 MORE -6 ? 2 'SSA (A^2)' 24040 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? H HOH . ? A HOH 14 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? H HOH . ? A HOH 15 ? 1_555 78.6 ? 2 O ? H HOH . ? A HOH 14 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 OD2 ? A ASP 216 ? A ASP 247 ? 1_555 87.2 ? 3 O ? H HOH . ? A HOH 15 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 OD2 ? A ASP 216 ? A ASP 247 ? 1_555 165.8 ? 4 O ? H HOH . ? A HOH 14 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 OE1 ? A GLU 275 ? A GLU 306 ? 1_555 90.1 ? 5 O ? H HOH . ? A HOH 15 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 OE1 ? A GLU 275 ? A GLU 306 ? 1_555 84.7 ? 6 OD2 ? A ASP 216 ? A ASP 247 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 OE1 ? A GLU 275 ? A GLU 306 ? 1_555 95.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-02-16 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2019-07-17 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Author supporting evidence' 4 3 'Structure model' 'Refinement description' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' 8 5 'Structure model' 'Database references' 9 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_struct_assembly_auth_evidence 2 3 'Structure model' software 3 4 'Structure model' software 4 4 'Structure model' struct_conn 5 5 'Structure model' database_2 6 5 'Structure model' pdbx_struct_conn_angle 7 5 'Structure model' struct_conn 8 5 'Structure model' struct_ref_seq_dif 9 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 20 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 21 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 22 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 23 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 24 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 25 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 26 5 'Structure model' '_pdbx_struct_conn_angle.value' 27 5 'Structure model' '_struct_conn.conn_type_id' 28 5 'Structure model' '_struct_conn.id' 29 5 'Structure model' '_struct_conn.pdbx_dist_value' 30 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 31 5 'Structure model' '_struct_conn.pdbx_ptnr1_label_alt_id' 32 5 'Structure model' '_struct_conn.pdbx_ptnr2_label_alt_id' 33 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 34 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 35 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 36 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 37 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 38 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 39 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 40 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 41 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 42 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 43 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 44 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 45 5 'Structure model' '_struct_ref_seq_dif.details' 46 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 47 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 48 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 6.0051 _pdbx_refine_tls.origin_y 4.6327 _pdbx_refine_tls.origin_z 17.6303 _pdbx_refine_tls.T[1][1] -0.1981 _pdbx_refine_tls.T[2][2] -0.1841 _pdbx_refine_tls.T[3][3] -0.1716 _pdbx_refine_tls.T[1][2] 0.0051 _pdbx_refine_tls.T[1][3] -0.0070 _pdbx_refine_tls.T[2][3] 0.0010 _pdbx_refine_tls.L[1][1] 1.7138 _pdbx_refine_tls.L[2][2] 1.4560 _pdbx_refine_tls.L[3][3] 1.5884 _pdbx_refine_tls.L[1][2] 1.0473 _pdbx_refine_tls.L[1][3] -0.1504 _pdbx_refine_tls.L[2][3] 0.1619 _pdbx_refine_tls.S[1][1] 0.0531 _pdbx_refine_tls.S[2][2] -0.0815 _pdbx_refine_tls.S[3][3] 0.0284 _pdbx_refine_tls.S[1][2] -0.1306 _pdbx_refine_tls.S[1][3] 0.0868 _pdbx_refine_tls.S[2][3] 0.0172 _pdbx_refine_tls.S[2][1] 0.0711 _pdbx_refine_tls.S[3][1] -0.0388 _pdbx_refine_tls.S[3][2] 0.0724 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 43 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 334 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.selection ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0019 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SOLVE . ? program 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 5 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? 7 # _pdbx_entry_details.entry_id 3L23 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. THE CLONED CONSTRUCT CONTAINS RESIDUES 33-334 OF THE FULL LENGTH PROTEIN. ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CB _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 CYS _pdbx_validate_rmsd_bond.auth_seq_id_1 153 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 SG _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 CYS _pdbx_validate_rmsd_bond.auth_seq_id_2 153 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.673 _pdbx_validate_rmsd_bond.bond_target_value 1.812 _pdbx_validate_rmsd_bond.bond_deviation -0.139 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.016 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 54 ? ? 53.65 -144.16 2 1 HIS A 198 ? ? -107.18 -137.29 3 1 ALA A 278 ? ? -148.04 -121.36 4 1 ALA A 278 ? ? -141.48 -121.36 5 1 MSE A 286 ? ? 81.82 119.22 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 59 ? CD ? A LYS 28 CD 2 1 Y 1 A LYS 59 ? CE ? A LYS 28 CE 3 1 Y 1 A LYS 59 ? NZ ? A LYS 28 NZ 4 1 Y 1 A LYS 105 ? CD ? A LYS 74 CD 5 1 Y 1 A LYS 105 ? CE ? A LYS 74 CE 6 1 Y 1 A LYS 105 ? NZ ? A LYS 74 NZ 7 1 Y 1 A SER 119 ? OG ? A SER 88 OG 8 1 Y 1 A PHE 122 ? CG ? A PHE 91 CG 9 1 Y 1 A PHE 122 ? CD1 ? A PHE 91 CD1 10 1 Y 1 A PHE 122 ? CD2 ? A PHE 91 CD2 11 1 Y 1 A PHE 122 ? CE1 ? A PHE 91 CE1 12 1 Y 1 A PHE 122 ? CE2 ? A PHE 91 CE2 13 1 Y 1 A PHE 122 ? CZ ? A PHE 91 CZ 14 1 Y 1 A LYS 123 ? CG ? A LYS 92 CG 15 1 Y 1 A LYS 123 ? CD ? A LYS 92 CD 16 1 Y 1 A LYS 123 ? CE ? A LYS 92 CE 17 1 Y 1 A LYS 123 ? NZ ? A LYS 92 NZ 18 1 Y 1 A LYS 128 ? CD ? A LYS 97 CD 19 1 Y 1 A LYS 128 ? CE ? A LYS 97 CE 20 1 Y 1 A LYS 128 ? NZ ? A LYS 97 NZ 21 1 Y 1 A GLU 132 ? CD ? A GLU 101 CD 22 1 Y 1 A GLU 132 ? OE1 ? A GLU 101 OE1 23 1 Y 1 A GLU 132 ? OE2 ? A GLU 101 OE2 24 1 Y 1 A LYS 136 ? CE ? A LYS 105 CE 25 1 Y 1 A LYS 136 ? NZ ? A LYS 105 NZ 26 1 Y 1 A LYS 150 ? CD ? A LYS 119 CD 27 1 Y 1 A LYS 150 ? CE ? A LYS 119 CE 28 1 Y 1 A LYS 150 ? NZ ? A LYS 119 NZ 29 1 Y 1 A LYS 208 ? CG ? A LYS 177 CG 30 1 Y 1 A LYS 208 ? CD ? A LYS 177 CD 31 1 Y 1 A LYS 208 ? CE ? A LYS 177 CE 32 1 Y 1 A LYS 208 ? NZ ? A LYS 177 NZ 33 1 Y 1 A GLU 209 ? CG ? A GLU 178 CG 34 1 Y 1 A GLU 209 ? CD ? A GLU 178 CD 35 1 Y 1 A GLU 209 ? OE1 ? A GLU 178 OE1 36 1 Y 1 A GLU 209 ? OE2 ? A GLU 178 OE2 37 1 Y 1 A GLN 211 ? CG ? A GLN 180 CG 38 1 Y 1 A GLN 211 ? CD ? A GLN 180 CD 39 1 Y 1 A GLN 211 ? OE1 ? A GLN 180 OE1 40 1 Y 1 A GLN 211 ? NE2 ? A GLN 180 NE2 41 1 Y 1 A PHE 222 ? CG ? A PHE 191 CG 42 1 Y 1 A PHE 222 ? CD1 ? A PHE 191 CD1 43 1 Y 1 A PHE 222 ? CD2 ? A PHE 191 CD2 44 1 Y 1 A PHE 222 ? CE1 ? A PHE 191 CE1 45 1 Y 1 A PHE 222 ? CE2 ? A PHE 191 CE2 46 1 Y 1 A PHE 222 ? CZ ? A PHE 191 CZ 47 1 Y 1 A LYS 224 ? CE ? A LYS 193 CE 48 1 Y 1 A LYS 224 ? NZ ? A LYS 193 NZ 49 1 Y 1 A LYS 264 ? CD ? A LYS 233 CD 50 1 Y 1 A LYS 264 ? CE ? A LYS 233 CE 51 1 Y 1 A LYS 264 ? NZ ? A LYS 233 NZ 52 1 Y 1 A LYS 301 ? CG ? A LYS 270 CG 53 1 Y 1 A LYS 301 ? CD ? A LYS 270 CD 54 1 Y 1 A LYS 301 ? CE ? A LYS 270 CE 55 1 Y 1 A LYS 301 ? NZ ? A LYS 270 NZ 56 1 Y 1 A LYS 329 ? CE ? A LYS 298 CE 57 1 Y 1 A LYS 329 ? NZ ? A LYS 298 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A ALA 33 ? A ALA 2 3 1 Y 1 A LEU 34 ? A LEU 3 4 1 Y 1 A GLY 35 ? A GLY 4 5 1 Y 1 A VAL 36 ? A VAL 5 6 1 Y 1 A VAL 37 ? A VAL 6 7 1 Y 1 A ASP 38 ? A ASP 7 8 1 Y 1 A GLU 39 ? A GLU 8 9 1 Y 1 A VAL 40 ? A VAL 9 10 1 Y 1 A HIS 41 ? A HIS 10 11 1 Y 1 A ALA 42 ? A ALA 11 12 1 Y 1 A GLU 212 ? A GLU 181 13 1 Y 1 A LYS 213 ? A LYS 182 14 1 Y 1 A VAL 214 ? A VAL 183 15 1 Y 1 A LYS 215 ? A LYS 184 16 1 Y 1 A GLY 216 ? A GLY 185 17 1 Y 1 A ASN 217 ? A ASN 186 18 1 Y 1 A PRO 218 ? A PRO 187 19 1 Y 1 A PHE 219 ? A PHE 188 20 1 Y 1 A ALA 220 ? A ALA 189 21 1 Y 1 A ALA 221 ? A ALA 190 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 1,2-ETHANEDIOL EDO 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #