data_3L3E # _entry.id 3L3E # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3L3E RCSB RCSB056782 WWPDB D_1000056782 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2010-12-08 _pdbx_database_PDB_obs_spr.pdb_id 3PD7 _pdbx_database_PDB_obs_spr.replace_pdb_id 3L3E _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.status_code OBS _pdbx_database_status.entry_id 3L3E _pdbx_database_status.recvd_initial_deposition_date 2009-12-16 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lee, J.' 1 'Xu, C.' 2 'Cui, G.' 3 'Thompson, J.R.' 4 'Mer, G.' 5 # _citation.id primary _citation.title 'Crystal Structure of the Sixth BRCT Domain of Human TopBP1' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Lee, J.' 1 primary 'Xu, C.' 2 primary 'Cui, G.' 3 primary 'Thompson, J.R.' 4 primary 'Mer, G.' 5 # _cell.entry_id 3L3E _cell.length_a 32.877 _cell.length_b 37.911 _cell.length_c 79.430 _cell.angle_alpha 90.00 _cell.angle_beta 89.99 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3L3E _symmetry.space_group_name_H-M 'P 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 3 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA topoisomerase 2-binding protein 1' 12216.718 2 ? W47R 'SIXTH BRCT DOMAIN' ? 2 water nat water 18.015 304 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'DNA topoisomerase II-binding protein 1, DNA topoisomerase IIbeta-binding protein 1, TopBP1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GHMEAQSEKEEAPKPLHKVVVCVSKKLSKKQSELNGIAASLGADYRRSFDETVTHFIYQGRPNDTNREYKSVKERGVHIV SEHWLLDCAQECKHLPESLYPHTYNGS ; _entity_poly.pdbx_seq_one_letter_code_can ;GHMEAQSEKEEAPKPLHKVVVCVSKKLSKKQSELNGIAASLGADYRRSFDETVTHFIYQGRPNDTNREYKSVKERGVHIV SEHWLLDCAQECKHLPESLYPHTYNGS ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 HIS n 1 3 MET n 1 4 GLU n 1 5 ALA n 1 6 GLN n 1 7 SER n 1 8 GLU n 1 9 LYS n 1 10 GLU n 1 11 GLU n 1 12 ALA n 1 13 PRO n 1 14 LYS n 1 15 PRO n 1 16 LEU n 1 17 HIS n 1 18 LYS n 1 19 VAL n 1 20 VAL n 1 21 VAL n 1 22 CYS n 1 23 VAL n 1 24 SER n 1 25 LYS n 1 26 LYS n 1 27 LEU n 1 28 SER n 1 29 LYS n 1 30 LYS n 1 31 GLN n 1 32 SER n 1 33 GLU n 1 34 LEU n 1 35 ASN n 1 36 GLY n 1 37 ILE n 1 38 ALA n 1 39 ALA n 1 40 SER n 1 41 LEU n 1 42 GLY n 1 43 ALA n 1 44 ASP n 1 45 TYR n 1 46 ARG n 1 47 ARG n 1 48 SER n 1 49 PHE n 1 50 ASP n 1 51 GLU n 1 52 THR n 1 53 VAL n 1 54 THR n 1 55 HIS n 1 56 PHE n 1 57 ILE n 1 58 TYR n 1 59 GLN n 1 60 GLY n 1 61 ARG n 1 62 PRO n 1 63 ASN n 1 64 ASP n 1 65 THR n 1 66 ASN n 1 67 ARG n 1 68 GLU n 1 69 TYR n 1 70 LYS n 1 71 SER n 1 72 VAL n 1 73 LYS n 1 74 GLU n 1 75 ARG n 1 76 GLY n 1 77 VAL n 1 78 HIS n 1 79 ILE n 1 80 VAL n 1 81 SER n 1 82 GLU n 1 83 HIS n 1 84 TRP n 1 85 LEU n 1 86 LEU n 1 87 ASP n 1 88 CYS n 1 89 ALA n 1 90 GLN n 1 91 GLU n 1 92 CYS n 1 93 LYS n 1 94 HIS n 1 95 LEU n 1 96 PRO n 1 97 GLU n 1 98 SER n 1 99 LEU n 1 100 TYR n 1 101 PRO n 1 102 HIS n 1 103 THR n 1 104 TYR n 1 105 ASN n 1 106 GLY n 1 107 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'TOPBP1, KIAA0259' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pTEV _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TOPB1_HUMAN _struct_ref.pdbx_db_accession Q92547 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EAQSEKEEAPKPLHKVVVCVSKKLSKKQSELNGIAASLGADYRWSFDETVTHFIYQGRPNDTNREYKSVKERGVHIVSEH WLLDCAQECKHLPESLYPHTYN ; _struct_ref.pdbx_align_begin 893 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3L3E A 4 ? 105 ? Q92547 893 ? 994 ? 4 105 2 1 3L3E B 4 ? 105 ? Q92547 893 ? 994 ? 4 105 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3L3E GLY A 1 ? UNP Q92547 ? ? 'EXPRESSION TAG' 1 1 1 3L3E HIS A 2 ? UNP Q92547 ? ? 'EXPRESSION TAG' 2 2 1 3L3E MET A 3 ? UNP Q92547 ? ? 'EXPRESSION TAG' 3 3 1 3L3E ARG A 47 ? UNP Q92547 TRP 936 ENGINEERED 47 4 1 3L3E GLY A 106 ? UNP Q92547 ? ? 'EXPRESSION TAG' 106 5 1 3L3E SER A 107 ? UNP Q92547 ? ? 'EXPRESSION TAG' 107 6 2 3L3E GLY B 1 ? UNP Q92547 ? ? 'EXPRESSION TAG' 1 7 2 3L3E HIS B 2 ? UNP Q92547 ? ? 'EXPRESSION TAG' 2 8 2 3L3E MET B 3 ? UNP Q92547 ? ? 'EXPRESSION TAG' 3 9 2 3L3E ARG B 47 ? UNP Q92547 TRP 936 ENGINEERED 47 10 2 3L3E GLY B 106 ? UNP Q92547 ? ? 'EXPRESSION TAG' 106 11 2 3L3E SER B 107 ? UNP Q92547 ? ? 'EXPRESSION TAG' 107 12 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3L3E _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.03 _exptl_crystal.density_percent_sol 39.29 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.6 _exptl_crystal_grow.pdbx_details '20% PEG 4000, 0.2M sodium acetate trihydrate, 0.1 M Tris/HCl, pH 6.6, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date 2006-02-10 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0079 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-BM' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-BM _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0079 # _reflns.entry_id 3L3E _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 79.31 _reflns.d_resolution_high 1.26 _reflns.number_obs 49019 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.039 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 53.6 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 9.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.26 _reflns_shell.d_res_low 1.31 _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_obs 0.242 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 8.4 _reflns_shell.pdbx_redundancy 8.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3L3E _refine.ls_number_reflns_obs 49019 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50 _refine.ls_d_res_high 1.26 _refine.ls_percent_reflns_obs 97.24 _refine.ls_R_factor_obs 0.17865 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.17792 _refine.ls_R_factor_R_free 0.19236 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 2634 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.963 _refine.correlation_coeff_Fo_to_Fc_free 0.957 _refine.B_iso_mean 14.230 _refine.aniso_B[1][1] -0.07 _refine.aniso_B[2][2] 0.66 _refine.aniso_B[3][3] -0.58 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.06 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.050 _refine.pdbx_overall_ESU_R_Free 0.050 _refine.overall_SU_ML 0.029 _refine.overall_SU_B 0.631 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1518 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 304 _refine_hist.number_atoms_total 1822 _refine_hist.d_res_high 1.26 _refine_hist.d_res_low 50 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.006 0.021 ? 1680 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.070 1.953 ? 2291 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.276 5.000 ? 220 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 30.644 23.412 ? 85 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.386 15.000 ? 321 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 15.586 15.000 ? 14 'X-RAY DIFFRACTION' ? r_chiral_restr 0.074 0.200 ? 243 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.021 ? 1302 'X-RAY DIFFRACTION' ? r_mcbond_it 0.620 1.500 ? 995 'X-RAY DIFFRACTION' ? r_mcangle_it 1.187 2.000 ? 1631 'X-RAY DIFFRACTION' ? r_scbond_it 1.638 3.000 ? 685 'X-RAY DIFFRACTION' ? r_scangle_it 2.736 4.500 ? 641 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.260 _refine_ls_shell.d_res_low 1.292 _refine_ls_shell.number_reflns_R_work 3297 _refine_ls_shell.R_factor_R_work 0.243 _refine_ls_shell.percent_reflns_obs 90.39 _refine_ls_shell.R_factor_R_free 0.288 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 172 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3L3E _struct.title 'Crystal Structure of the Sixth BRCT Domain of Human TopBP1' _struct.pdbx_descriptor 'DNA topoisomerase 2-binding protein 1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3L3E _struct_keywords.pdbx_keywords 'CELL CYCLE' _struct_keywords.text 'BRCT DOMAIN, DNA REPAIR, CELL CYCLE CHECKPOINTS, Cytoskeleton, DNA damage, DNA-binding, Nucleus, Phosphoprotein, CELL CYCLE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 25 ? LYS A 29 ? LYS A 25 LYS A 29 5 ? 5 HELX_P HELX_P2 2 LYS A 30 ? LEU A 41 ? LYS A 30 LEU A 41 1 ? 12 HELX_P HELX_P3 3 ASN A 66 ? ARG A 75 ? ASN A 66 ARG A 75 1 ? 10 HELX_P HELX_P4 4 SER A 81 ? CYS A 92 ? SER A 81 CYS A 92 1 ? 12 HELX_P HELX_P5 5 PRO A 96 ? TYR A 100 ? PRO A 96 TYR A 100 5 ? 5 HELX_P HELX_P6 6 LYS B 25 ? LYS B 29 ? LYS B 25 LYS B 29 5 ? 5 HELX_P HELX_P7 7 LYS B 30 ? LEU B 41 ? LYS B 30 LEU B 41 1 ? 12 HELX_P HELX_P8 8 ASN B 66 ? ARG B 75 ? ASN B 66 ARG B 75 1 ? 10 HELX_P HELX_P9 9 SER B 81 ? CYS B 92 ? SER B 81 CYS B 92 1 ? 12 HELX_P HELX_P10 10 PRO B 96 ? TYR B 100 ? PRO B 96 TYR B 100 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASP A 44 ? ARG A 46 ? ASP A 44 ARG A 46 A 2 VAL A 20 ? VAL A 23 ? VAL A 20 VAL A 23 A 3 HIS A 55 ? ILE A 57 ? HIS A 55 ILE A 57 A 4 HIS A 78 ? VAL A 80 ? HIS A 78 VAL A 80 B 1 ASP B 44 ? ARG B 46 ? ASP B 44 ARG B 46 B 2 VAL B 20 ? VAL B 23 ? VAL B 20 VAL B 23 B 3 HIS B 55 ? ILE B 57 ? HIS B 55 ILE B 57 B 4 HIS B 78 ? VAL B 80 ? HIS B 78 VAL B 80 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ASP A 44 ? O ASP A 44 N VAL A 21 ? N VAL A 21 A 2 3 N CYS A 22 ? N CYS A 22 O ILE A 57 ? O ILE A 57 A 3 4 N PHE A 56 ? N PHE A 56 O HIS A 78 ? O HIS A 78 B 1 2 O ASP B 44 ? O ASP B 44 N VAL B 21 ? N VAL B 21 B 2 3 N CYS B 22 ? N CYS B 22 O ILE B 57 ? O ILE B 57 B 3 4 N PHE B 56 ? N PHE B 56 O HIS B 78 ? O HIS B 78 # _database_PDB_matrix.entry_id 3L3E _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3L3E _atom_sites.fract_transf_matrix[1][1] 0.030416 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] -0.000007 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.026378 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012590 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 ? ? ? A . n A 1 2 HIS 2 2 ? ? ? A . n A 1 3 MET 3 3 ? ? ? A . n A 1 4 GLU 4 4 ? ? ? A . n A 1 5 ALA 5 5 ? ? ? A . n A 1 6 GLN 6 6 ? ? ? A . n A 1 7 SER 7 7 ? ? ? A . n A 1 8 GLU 8 8 ? ? ? A . n A 1 9 LYS 9 9 ? ? ? A . n A 1 10 GLU 10 10 ? ? ? A . n A 1 11 GLU 11 11 ? ? ? A . n A 1 12 ALA 12 12 ? ? ? A . n A 1 13 PRO 13 13 ? ? ? A . n A 1 14 LYS 14 14 14 LYS LYS A . n A 1 15 PRO 15 15 15 PRO PRO A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 HIS 17 17 17 HIS HIS A . n A 1 18 LYS 18 18 18 LYS LYS A . n A 1 19 VAL 19 19 19 VAL VAL A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 VAL 21 21 21 VAL VAL A . n A 1 22 CYS 22 22 22 CYS CYS A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 LYS 26 26 26 LYS LYS A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 GLN 31 31 31 GLN GLN A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 GLU 33 33 33 GLU GLU A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 ASN 35 35 35 ASN ASN A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 ILE 37 37 37 ILE ILE A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 SER 40 40 40 SER SER A . n A 1 41 LEU 41 41 41 LEU LEU A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 ASP 44 44 44 ASP ASP A . n A 1 45 TYR 45 45 45 TYR TYR A . n A 1 46 ARG 46 46 46 ARG ARG A . n A 1 47 ARG 47 47 47 ARG ARG A . n A 1 48 SER 48 48 48 SER SER A . n A 1 49 PHE 49 49 49 PHE PHE A . n A 1 50 ASP 50 50 50 ASP ASP A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 THR 52 52 52 THR THR A . n A 1 53 VAL 53 53 53 VAL VAL A . n A 1 54 THR 54 54 54 THR THR A . n A 1 55 HIS 55 55 55 HIS HIS A . n A 1 56 PHE 56 56 56 PHE PHE A . n A 1 57 ILE 57 57 57 ILE ILE A . n A 1 58 TYR 58 58 58 TYR TYR A . n A 1 59 GLN 59 59 59 GLN GLN A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 ARG 61 61 61 ARG ARG A . n A 1 62 PRO 62 62 62 PRO PRO A . n A 1 63 ASN 63 63 63 ASN ASN A . n A 1 64 ASP 64 64 64 ASP ASP A . n A 1 65 THR 65 65 65 THR THR A . n A 1 66 ASN 66 66 66 ASN ASN A . n A 1 67 ARG 67 67 67 ARG ARG A . n A 1 68 GLU 68 68 68 GLU GLU A . n A 1 69 TYR 69 69 69 TYR TYR A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 SER 71 71 71 SER SER A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 ARG 75 75 75 ARG ARG A . n A 1 76 GLY 76 76 76 GLY GLY A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 HIS 78 78 78 HIS HIS A . n A 1 79 ILE 79 79 79 ILE ILE A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 GLU 82 82 82 GLU GLU A . n A 1 83 HIS 83 83 83 HIS HIS A . n A 1 84 TRP 84 84 84 TRP TRP A . n A 1 85 LEU 85 85 85 LEU LEU A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 CYS 88 88 88 CYS CYS A . n A 1 89 ALA 89 89 89 ALA ALA A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 GLU 91 91 91 GLU GLU A . n A 1 92 CYS 92 92 92 CYS CYS A . n A 1 93 LYS 93 93 93 LYS LYS A . n A 1 94 HIS 94 94 94 HIS HIS A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 PRO 96 96 96 PRO PRO A . n A 1 97 GLU 97 97 97 GLU GLU A . n A 1 98 SER 98 98 98 SER SER A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 TYR 100 100 100 TYR TYR A . n A 1 101 PRO 101 101 101 PRO PRO A . n A 1 102 HIS 102 102 102 HIS HIS A . n A 1 103 THR 103 103 103 THR THR A . n A 1 104 TYR 104 104 104 TYR TYR A . n A 1 105 ASN 105 105 105 ASN ASN A . n A 1 106 GLY 106 106 106 GLY GLY A . n A 1 107 SER 107 107 107 SER SER A . n B 1 1 GLY 1 1 ? ? ? B . n B 1 2 HIS 2 2 ? ? ? B . n B 1 3 MET 3 3 ? ? ? B . n B 1 4 GLU 4 4 ? ? ? B . n B 1 5 ALA 5 5 ? ? ? B . n B 1 6 GLN 6 6 ? ? ? B . n B 1 7 SER 7 7 ? ? ? B . n B 1 8 GLU 8 8 ? ? ? B . n B 1 9 LYS 9 9 ? ? ? B . n B 1 10 GLU 10 10 ? ? ? B . n B 1 11 GLU 11 11 ? ? ? B . n B 1 12 ALA 12 12 ? ? ? B . n B 1 13 PRO 13 13 ? ? ? B . n B 1 14 LYS 14 14 14 LYS LYS B . n B 1 15 PRO 15 15 15 PRO PRO B . n B 1 16 LEU 16 16 16 LEU LEU B . n B 1 17 HIS 17 17 17 HIS HIS B . n B 1 18 LYS 18 18 18 LYS LYS B . n B 1 19 VAL 19 19 19 VAL VAL B . n B 1 20 VAL 20 20 20 VAL VAL B . n B 1 21 VAL 21 21 21 VAL VAL B . n B 1 22 CYS 22 22 22 CYS CYS B . n B 1 23 VAL 23 23 23 VAL VAL B . n B 1 24 SER 24 24 24 SER SER B . n B 1 25 LYS 25 25 25 LYS LYS B . n B 1 26 LYS 26 26 26 LYS LYS B . n B 1 27 LEU 27 27 27 LEU LEU B . n B 1 28 SER 28 28 28 SER SER B . n B 1 29 LYS 29 29 29 LYS LYS B . n B 1 30 LYS 30 30 30 LYS LYS B . n B 1 31 GLN 31 31 31 GLN GLN B . n B 1 32 SER 32 32 32 SER SER B . n B 1 33 GLU 33 33 33 GLU GLU B . n B 1 34 LEU 34 34 34 LEU LEU B . n B 1 35 ASN 35 35 35 ASN ASN B . n B 1 36 GLY 36 36 36 GLY GLY B . n B 1 37 ILE 37 37 37 ILE ILE B . n B 1 38 ALA 38 38 38 ALA ALA B . n B 1 39 ALA 39 39 39 ALA ALA B . n B 1 40 SER 40 40 40 SER SER B . n B 1 41 LEU 41 41 41 LEU LEU B . n B 1 42 GLY 42 42 42 GLY GLY B . n B 1 43 ALA 43 43 43 ALA ALA B . n B 1 44 ASP 44 44 44 ASP ASP B . n B 1 45 TYR 45 45 45 TYR TYR B . n B 1 46 ARG 46 46 46 ARG ARG B . n B 1 47 ARG 47 47 47 ARG ARG B . n B 1 48 SER 48 48 48 SER SER B . n B 1 49 PHE 49 49 49 PHE PHE B . n B 1 50 ASP 50 50 50 ASP ASP B . n B 1 51 GLU 51 51 51 GLU GLU B . n B 1 52 THR 52 52 52 THR THR B . n B 1 53 VAL 53 53 53 VAL VAL B . n B 1 54 THR 54 54 54 THR THR B . n B 1 55 HIS 55 55 55 HIS HIS B . n B 1 56 PHE 56 56 56 PHE PHE B . n B 1 57 ILE 57 57 57 ILE ILE B . n B 1 58 TYR 58 58 58 TYR TYR B . n B 1 59 GLN 59 59 59 GLN GLN B . n B 1 60 GLY 60 60 60 GLY GLY B . n B 1 61 ARG 61 61 61 ARG ARG B . n B 1 62 PRO 62 62 62 PRO PRO B . n B 1 63 ASN 63 63 63 ASN ASN B . n B 1 64 ASP 64 64 64 ASP ASP B . n B 1 65 THR 65 65 65 THR THR B . n B 1 66 ASN 66 66 66 ASN ASN B . n B 1 67 ARG 67 67 67 ARG ARG B . n B 1 68 GLU 68 68 68 GLU GLU B . n B 1 69 TYR 69 69 69 TYR TYR B . n B 1 70 LYS 70 70 70 LYS LYS B . n B 1 71 SER 71 71 71 SER SER B . n B 1 72 VAL 72 72 72 VAL VAL B . n B 1 73 LYS 73 73 73 LYS LYS B . n B 1 74 GLU 74 74 74 GLU GLU B . n B 1 75 ARG 75 75 75 ARG ARG B . n B 1 76 GLY 76 76 76 GLY GLY B . n B 1 77 VAL 77 77 77 VAL VAL B . n B 1 78 HIS 78 78 78 HIS HIS B . n B 1 79 ILE 79 79 79 ILE ILE B . n B 1 80 VAL 80 80 80 VAL VAL B . n B 1 81 SER 81 81 81 SER SER B . n B 1 82 GLU 82 82 82 GLU GLU B . n B 1 83 HIS 83 83 83 HIS HIS B . n B 1 84 TRP 84 84 84 TRP TRP B . n B 1 85 LEU 85 85 85 LEU LEU B . n B 1 86 LEU 86 86 86 LEU LEU B . n B 1 87 ASP 87 87 87 ASP ASP B . n B 1 88 CYS 88 88 88 CYS CYS B . n B 1 89 ALA 89 89 89 ALA ALA B . n B 1 90 GLN 90 90 90 GLN GLN B . n B 1 91 GLU 91 91 91 GLU GLU B . n B 1 92 CYS 92 92 92 CYS CYS B . n B 1 93 LYS 93 93 93 LYS LYS B . n B 1 94 HIS 94 94 94 HIS HIS B . n B 1 95 LEU 95 95 95 LEU LEU B . n B 1 96 PRO 96 96 96 PRO PRO B . n B 1 97 GLU 97 97 97 GLU GLU B . n B 1 98 SER 98 98 98 SER SER B . n B 1 99 LEU 99 99 99 LEU LEU B . n B 1 100 TYR 100 100 100 TYR TYR B . n B 1 101 PRO 101 101 101 PRO PRO B . n B 1 102 HIS 102 102 102 HIS HIS B . n B 1 103 THR 103 103 103 THR THR B . n B 1 104 TYR 104 104 104 TYR TYR B . n B 1 105 ASN 105 105 105 ASN ASN B . n B 1 106 GLY 106 106 106 GLY GLY B . n B 1 107 SER 107 107 107 SER SER B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 108 108 HOH HOH A . C 2 HOH 2 109 1 HOH HOH A . C 2 HOH 3 110 110 HOH HOH A . C 2 HOH 4 111 5 HOH HOH A . C 2 HOH 5 112 6 HOH HOH A . C 2 HOH 6 113 113 HOH HOH A . C 2 HOH 7 114 114 HOH HOH A . C 2 HOH 8 115 115 HOH HOH A . C 2 HOH 9 116 116 HOH HOH A . C 2 HOH 10 117 117 HOH HOH A . C 2 HOH 11 118 7 HOH HOH A . C 2 HOH 12 119 8 HOH HOH A . C 2 HOH 13 120 11 HOH HOH A . C 2 HOH 14 121 12 HOH HOH A . C 2 HOH 15 122 122 HOH HOH A . C 2 HOH 16 123 16 HOH HOH A . C 2 HOH 17 124 124 HOH HOH A . C 2 HOH 18 125 125 HOH HOH A . C 2 HOH 19 126 126 HOH HOH A . C 2 HOH 20 127 17 HOH HOH A . C 2 HOH 21 128 18 HOH HOH A . C 2 HOH 22 129 129 HOH HOH A . C 2 HOH 23 130 130 HOH HOH A . C 2 HOH 24 131 20 HOH HOH A . C 2 HOH 25 132 21 HOH HOH A . C 2 HOH 26 133 25 HOH HOH A . C 2 HOH 27 134 134 HOH HOH A . C 2 HOH 28 135 26 HOH HOH A . C 2 HOH 29 136 136 HOH HOH A . C 2 HOH 30 137 137 HOH HOH A . C 2 HOH 31 138 27 HOH HOH A . C 2 HOH 32 139 29 HOH HOH A . C 2 HOH 33 140 140 HOH HOH A . C 2 HOH 34 141 141 HOH HOH A . C 2 HOH 35 142 142 HOH HOH A . C 2 HOH 36 143 143 HOH HOH A . C 2 HOH 37 144 30 HOH HOH A . C 2 HOH 38 145 31 HOH HOH A . C 2 HOH 39 146 33 HOH HOH A . C 2 HOH 40 147 147 HOH HOH A . C 2 HOH 41 148 148 HOH HOH A . C 2 HOH 42 149 37 HOH HOH A . C 2 HOH 43 150 150 HOH HOH A . C 2 HOH 44 151 151 HOH HOH A . C 2 HOH 45 152 152 HOH HOH A . C 2 HOH 46 153 38 HOH HOH A . C 2 HOH 47 154 40 HOH HOH A . C 2 HOH 48 155 155 HOH HOH A . C 2 HOH 49 156 156 HOH HOH A . C 2 HOH 50 157 157 HOH HOH A . C 2 HOH 51 158 158 HOH HOH A . C 2 HOH 52 159 159 HOH HOH A . C 2 HOH 53 160 41 HOH HOH A . C 2 HOH 54 161 42 HOH HOH A . C 2 HOH 55 162 162 HOH HOH A . C 2 HOH 56 163 45 HOH HOH A . C 2 HOH 57 164 46 HOH HOH A . C 2 HOH 58 165 47 HOH HOH A . C 2 HOH 59 166 48 HOH HOH A . C 2 HOH 60 167 49 HOH HOH A . C 2 HOH 61 168 168 HOH HOH A . C 2 HOH 62 169 50 HOH HOH A . C 2 HOH 63 170 51 HOH HOH A . C 2 HOH 64 171 53 HOH HOH A . C 2 HOH 65 172 172 HOH HOH A . C 2 HOH 66 173 55 HOH HOH A . C 2 HOH 67 174 58 HOH HOH A . C 2 HOH 68 175 175 HOH HOH A . C 2 HOH 69 176 59 HOH HOH A . C 2 HOH 70 177 177 HOH HOH A . C 2 HOH 71 178 61 HOH HOH A . C 2 HOH 72 179 63 HOH HOH A . C 2 HOH 73 180 180 HOH HOH A . C 2 HOH 74 181 181 HOH HOH A . C 2 HOH 75 182 64 HOH HOH A . C 2 HOH 76 183 68 HOH HOH A . C 2 HOH 77 184 184 HOH HOH A . C 2 HOH 78 185 185 HOH HOH A . C 2 HOH 79 186 186 HOH HOH A . C 2 HOH 80 187 187 HOH HOH A . C 2 HOH 81 188 69 HOH HOH A . C 2 HOH 82 189 189 HOH HOH A . C 2 HOH 83 190 73 HOH HOH A . C 2 HOH 84 191 75 HOH HOH A . C 2 HOH 85 192 192 HOH HOH A . C 2 HOH 86 193 77 HOH HOH A . C 2 HOH 87 194 194 HOH HOH A . C 2 HOH 88 195 195 HOH HOH A . C 2 HOH 89 196 196 HOH HOH A . C 2 HOH 90 197 197 HOH HOH A . C 2 HOH 91 198 81 HOH HOH A . C 2 HOH 92 199 84 HOH HOH A . C 2 HOH 93 200 200 HOH HOH A . C 2 HOH 94 201 201 HOH HOH A . C 2 HOH 95 202 85 HOH HOH A . C 2 HOH 96 203 203 HOH HOH A . C 2 HOH 97 204 204 HOH HOH A . C 2 HOH 98 205 87 HOH HOH A . C 2 HOH 99 206 206 HOH HOH A . C 2 HOH 100 207 207 HOH HOH A . C 2 HOH 101 208 89 HOH HOH A . C 2 HOH 102 209 90 HOH HOH A . C 2 HOH 103 210 210 HOH HOH A . C 2 HOH 104 211 211 HOH HOH A . C 2 HOH 105 212 91 HOH HOH A . C 2 HOH 106 213 93 HOH HOH A . C 2 HOH 107 214 214 HOH HOH A . C 2 HOH 108 215 97 HOH HOH A . C 2 HOH 109 216 99 HOH HOH A . C 2 HOH 110 217 217 HOH HOH A . C 2 HOH 111 218 100 HOH HOH A . C 2 HOH 112 219 219 HOH HOH A . C 2 HOH 113 220 103 HOH HOH A . C 2 HOH 114 221 106 HOH HOH A . C 2 HOH 115 223 223 HOH HOH A . C 2 HOH 116 224 224 HOH HOH A . C 2 HOH 117 228 228 HOH HOH A . C 2 HOH 118 230 230 HOH HOH A . C 2 HOH 119 231 231 HOH HOH A . C 2 HOH 120 233 233 HOH HOH A . C 2 HOH 121 234 234 HOH HOH A . C 2 HOH 122 235 235 HOH HOH A . C 2 HOH 123 236 236 HOH HOH A . C 2 HOH 124 238 238 HOH HOH A . C 2 HOH 125 239 239 HOH HOH A . C 2 HOH 126 240 240 HOH HOH A . C 2 HOH 127 242 242 HOH HOH A . C 2 HOH 128 249 249 HOH HOH A . C 2 HOH 129 251 251 HOH HOH A . C 2 HOH 130 253 253 HOH HOH A . C 2 HOH 131 254 254 HOH HOH A . C 2 HOH 132 255 255 HOH HOH A . C 2 HOH 133 257 257 HOH HOH A . C 2 HOH 134 265 265 HOH HOH A . C 2 HOH 135 268 268 HOH HOH A . C 2 HOH 136 269 269 HOH HOH A . C 2 HOH 137 273 273 HOH HOH A . C 2 HOH 138 274 274 HOH HOH A . C 2 HOH 139 275 275 HOH HOH A . C 2 HOH 140 276 276 HOH HOH A . C 2 HOH 141 280 280 HOH HOH A . C 2 HOH 142 282 282 HOH HOH A . C 2 HOH 143 288 288 HOH HOH A . C 2 HOH 144 289 289 HOH HOH A . C 2 HOH 145 292 292 HOH HOH A . C 2 HOH 146 296 296 HOH HOH A . C 2 HOH 147 297 297 HOH HOH A . C 2 HOH 148 299 299 HOH HOH A . C 2 HOH 149 301 301 HOH HOH A . C 2 HOH 150 303 303 HOH HOH A . C 2 HOH 151 306 306 HOH HOH A . C 2 HOH 152 308 308 HOH HOH A . C 2 HOH 153 315 315 HOH HOH A . C 2 HOH 154 317 317 HOH HOH A . C 2 HOH 155 326 326 HOH HOH A . D 2 HOH 1 108 2 HOH HOH B . D 2 HOH 2 109 109 HOH HOH B . D 2 HOH 3 110 3 HOH HOH B . D 2 HOH 4 111 111 HOH HOH B . D 2 HOH 5 112 112 HOH HOH B . D 2 HOH 6 113 4 HOH HOH B . D 2 HOH 7 114 9 HOH HOH B . D 2 HOH 8 115 10 HOH HOH B . D 2 HOH 9 116 13 HOH HOH B . D 2 HOH 10 117 14 HOH HOH B . D 2 HOH 11 118 118 HOH HOH B . D 2 HOH 12 119 119 HOH HOH B . D 2 HOH 13 120 120 HOH HOH B . D 2 HOH 14 121 121 HOH HOH B . D 2 HOH 15 122 15 HOH HOH B . D 2 HOH 16 123 123 HOH HOH B . D 2 HOH 17 124 19 HOH HOH B . D 2 HOH 18 125 22 HOH HOH B . D 2 HOH 19 126 23 HOH HOH B . D 2 HOH 20 127 127 HOH HOH B . D 2 HOH 21 128 128 HOH HOH B . D 2 HOH 22 129 24 HOH HOH B . D 2 HOH 23 130 28 HOH HOH B . D 2 HOH 24 131 131 HOH HOH B . D 2 HOH 25 132 132 HOH HOH B . D 2 HOH 26 133 133 HOH HOH B . D 2 HOH 27 134 32 HOH HOH B . D 2 HOH 28 135 135 HOH HOH B . D 2 HOH 29 136 34 HOH HOH B . D 2 HOH 30 137 35 HOH HOH B . D 2 HOH 31 138 138 HOH HOH B . D 2 HOH 32 139 139 HOH HOH B . D 2 HOH 33 140 36 HOH HOH B . D 2 HOH 34 141 39 HOH HOH B . D 2 HOH 35 142 43 HOH HOH B . D 2 HOH 36 143 44 HOH HOH B . D 2 HOH 37 144 144 HOH HOH B . D 2 HOH 38 145 145 HOH HOH B . D 2 HOH 39 146 146 HOH HOH B . D 2 HOH 40 147 52 HOH HOH B . D 2 HOH 41 148 54 HOH HOH B . D 2 HOH 42 149 149 HOH HOH B . D 2 HOH 43 150 56 HOH HOH B . D 2 HOH 44 151 57 HOH HOH B . D 2 HOH 45 152 60 HOH HOH B . D 2 HOH 46 153 153 HOH HOH B . D 2 HOH 47 154 154 HOH HOH B . D 2 HOH 48 155 62 HOH HOH B . D 2 HOH 49 156 65 HOH HOH B . D 2 HOH 50 157 66 HOH HOH B . D 2 HOH 51 158 67 HOH HOH B . D 2 HOH 52 159 70 HOH HOH B . D 2 HOH 53 160 160 HOH HOH B . D 2 HOH 54 161 161 HOH HOH B . D 2 HOH 55 162 71 HOH HOH B . D 2 HOH 56 163 163 HOH HOH B . D 2 HOH 57 164 164 HOH HOH B . D 2 HOH 58 165 165 HOH HOH B . D 2 HOH 59 166 166 HOH HOH B . D 2 HOH 60 167 167 HOH HOH B . D 2 HOH 61 168 72 HOH HOH B . D 2 HOH 62 169 169 HOH HOH B . D 2 HOH 63 170 170 HOH HOH B . D 2 HOH 64 171 171 HOH HOH B . D 2 HOH 65 172 74 HOH HOH B . D 2 HOH 66 173 173 HOH HOH B . D 2 HOH 67 174 174 HOH HOH B . D 2 HOH 68 175 76 HOH HOH B . D 2 HOH 69 176 176 HOH HOH B . D 2 HOH 70 177 78 HOH HOH B . D 2 HOH 71 178 178 HOH HOH B . D 2 HOH 72 179 179 HOH HOH B . D 2 HOH 73 180 79 HOH HOH B . D 2 HOH 74 181 80 HOH HOH B . D 2 HOH 75 182 182 HOH HOH B . D 2 HOH 76 183 183 HOH HOH B . D 2 HOH 77 184 82 HOH HOH B . D 2 HOH 78 185 83 HOH HOH B . D 2 HOH 79 186 86 HOH HOH B . D 2 HOH 80 187 88 HOH HOH B . D 2 HOH 81 188 188 HOH HOH B . D 2 HOH 82 189 92 HOH HOH B . D 2 HOH 83 190 190 HOH HOH B . D 2 HOH 84 191 191 HOH HOH B . D 2 HOH 85 192 94 HOH HOH B . D 2 HOH 86 193 193 HOH HOH B . D 2 HOH 87 194 95 HOH HOH B . D 2 HOH 88 195 96 HOH HOH B . D 2 HOH 89 196 98 HOH HOH B . D 2 HOH 90 197 101 HOH HOH B . D 2 HOH 91 198 198 HOH HOH B . D 2 HOH 92 199 102 HOH HOH B . D 2 HOH 93 200 104 HOH HOH B . D 2 HOH 94 201 105 HOH HOH B . D 2 HOH 95 202 202 HOH HOH B . D 2 HOH 96 203 107 HOH HOH B . D 2 HOH 97 205 205 HOH HOH B . D 2 HOH 98 208 208 HOH HOH B . D 2 HOH 99 209 209 HOH HOH B . D 2 HOH 100 213 213 HOH HOH B . D 2 HOH 101 215 215 HOH HOH B . D 2 HOH 102 216 216 HOH HOH B . D 2 HOH 103 218 218 HOH HOH B . D 2 HOH 104 220 220 HOH HOH B . D 2 HOH 105 221 221 HOH HOH B . D 2 HOH 106 225 225 HOH HOH B . D 2 HOH 107 226 226 HOH HOH B . D 2 HOH 108 227 227 HOH HOH B . D 2 HOH 109 229 229 HOH HOH B . D 2 HOH 110 232 232 HOH HOH B . D 2 HOH 111 237 237 HOH HOH B . D 2 HOH 112 241 241 HOH HOH B . D 2 HOH 113 243 243 HOH HOH B . D 2 HOH 114 244 244 HOH HOH B . D 2 HOH 115 245 245 HOH HOH B . D 2 HOH 116 246 246 HOH HOH B . D 2 HOH 117 247 247 HOH HOH B . D 2 HOH 118 248 248 HOH HOH B . D 2 HOH 119 250 250 HOH HOH B . D 2 HOH 120 256 256 HOH HOH B . D 2 HOH 121 258 258 HOH HOH B . D 2 HOH 122 259 259 HOH HOH B . D 2 HOH 123 260 260 HOH HOH B . D 2 HOH 124 261 261 HOH HOH B . D 2 HOH 125 262 262 HOH HOH B . D 2 HOH 126 264 264 HOH HOH B . D 2 HOH 127 266 266 HOH HOH B . D 2 HOH 128 267 267 HOH HOH B . D 2 HOH 129 270 270 HOH HOH B . D 2 HOH 130 271 271 HOH HOH B . D 2 HOH 131 272 272 HOH HOH B . D 2 HOH 132 277 277 HOH HOH B . D 2 HOH 133 281 281 HOH HOH B . D 2 HOH 134 283 283 HOH HOH B . D 2 HOH 135 285 285 HOH HOH B . D 2 HOH 136 286 286 HOH HOH B . D 2 HOH 137 290 290 HOH HOH B . D 2 HOH 138 291 291 HOH HOH B . D 2 HOH 139 295 295 HOH HOH B . D 2 HOH 140 298 298 HOH HOH B . D 2 HOH 141 305 305 HOH HOH B . D 2 HOH 142 310 310 HOH HOH B . D 2 HOH 143 312 312 HOH HOH B . D 2 HOH 144 314 314 HOH HOH B . D 2 HOH 145 320 320 HOH HOH B . D 2 HOH 146 322 322 HOH HOH B . D 2 HOH 147 323 323 HOH HOH B . D 2 HOH 148 324 324 HOH HOH B . D 2 HOH 149 325 325 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C 2 1 B,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 192 ? C HOH . 2 1 B HOH 157 ? D HOH . 3 1 B HOH 178 ? D HOH . 4 1 B HOH 188 ? D HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-01-12 2 'Structure model' 1 1 2010-12-08 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHASER 'model building' . ? 2 REFMAC refinement 5.4.0061 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 PHASER phasing . ? 6 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 1 ? A GLY 1 2 1 Y 1 A HIS 2 ? A HIS 2 3 1 Y 1 A MET 3 ? A MET 3 4 1 Y 1 A GLU 4 ? A GLU 4 5 1 Y 1 A ALA 5 ? A ALA 5 6 1 Y 1 A GLN 6 ? A GLN 6 7 1 Y 1 A SER 7 ? A SER 7 8 1 Y 1 A GLU 8 ? A GLU 8 9 1 Y 1 A LYS 9 ? A LYS 9 10 1 Y 1 A GLU 10 ? A GLU 10 11 1 Y 1 A GLU 11 ? A GLU 11 12 1 Y 1 A ALA 12 ? A ALA 12 13 1 Y 1 A PRO 13 ? A PRO 13 14 1 Y 1 B GLY 1 ? B GLY 1 15 1 Y 1 B HIS 2 ? B HIS 2 16 1 Y 1 B MET 3 ? B MET 3 17 1 Y 1 B GLU 4 ? B GLU 4 18 1 Y 1 B ALA 5 ? B ALA 5 19 1 Y 1 B GLN 6 ? B GLN 6 20 1 Y 1 B SER 7 ? B SER 7 21 1 Y 1 B GLU 8 ? B GLU 8 22 1 Y 1 B LYS 9 ? B LYS 9 23 1 Y 1 B GLU 10 ? B GLU 10 24 1 Y 1 B GLU 11 ? B GLU 11 25 1 Y 1 B ALA 12 ? B ALA 12 26 1 Y 1 B PRO 13 ? B PRO 13 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #