HEADER PROTEIN BINDING 20-DEC-09 3L4H TITLE HELICAL BOX DOMAIN AND SECOND WW DOMAIN OF THE HUMAN E3 UBIQUITIN- TITLE 2 PROTEIN LIGASE HECW1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE HECW1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: HELICAL BOX AND SECOND WW DOMAIN (UNP RESIDUES 948-1056); COMPND 5 SYNONYM: HECT, C2 AND WW DOMAIN-CONTAINING PROTEIN 1, NEDD4-LIKE E3 COMPND 6 UBIQUITIN-PROTEIN LIGASE 1, HNEDL1; COMPND 7 EC: 6.3.2.-; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HECW1, KIAA0322, NEDL1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) V2R; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A-LIC KEYWDS E3 LIGASE, WW DOMAIN, UBL-CONJUGATION PATHWAY, STRUCTURAL GENOMICS, KEYWDS 2 STRUCTURAL GENOMICS CONSORTIUM, SGC, COILED COIL, CYTOPLASM, LIGASE, KEYWDS 3 HELICAL BOX DOMAIN, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR J.R.WALKER,L.QIU,Y.LI,J.WEIGELT,C.BOUNTRA,C.H.ARROWSMITH,A.M.EDWARDS, AUTHOR 2 A.BOTCHKAREV,S.DHE-PAGANON,STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 1 05-MAY-10 3L4H 0 JRNL AUTH J.R.WALKER,L.QIU,Y.LI,J.WEIGELT,C.BOUNTRA,C.H.ARROWSMITH, JRNL AUTH 2 A.M.EDWARDS,A.BOCHKAREV,S.DHE-PAGANON JRNL TITL THE TANDEM HELICAL BOX AND SECOND WW DOMAINS OF HUMAN HECW1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.45 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 7986 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.152 REMARK 3 R VALUE (WORKING SET) : 0.150 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 413 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 589 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.1490 REMARK 3 BIN FREE R VALUE SET COUNT : 30 REMARK 3 BIN FREE R VALUE : 0.2330 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 902 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 72 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.02000 REMARK 3 B22 (A**2) : -0.02000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.01000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.139 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.130 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.081 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.608 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.969 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 960 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1303 ; 1.546 ; 1.936 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 115 ; 6.205 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 49 ;35.195 ;22.653 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 163 ;14.804 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;15.024 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 142 ; 0.106 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 749 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 573 ; 0.738 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 935 ; 1.263 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 387 ; 2.350 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 368 ; 3.640 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 948 A 953 REMARK 3 ORIGIN FOR THE GROUP (A): 4.7546 37.1568 24.7555 REMARK 3 T TENSOR REMARK 3 T11: 0.1798 T22: 0.2364 REMARK 3 T33: 0.0795 T12: -0.0895 REMARK 3 T13: -0.0010 T23: 0.0663 REMARK 3 L TENSOR REMARK 3 L11: 9.7360 L22: 15.8897 REMARK 3 L33: 6.4823 L12: 8.8680 REMARK 3 L13: -0.2207 L23: -2.8551 REMARK 3 S TENSOR REMARK 3 S11: -0.6136 S12: 0.9708 S13: 0.2713 REMARK 3 S21: -0.5010 S22: 0.3734 S23: -0.0326 REMARK 3 S31: -0.1928 S32: 0.6034 S33: 0.2402 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 954 A 966 REMARK 3 ORIGIN FOR THE GROUP (A): -3.4466 35.1640 34.9054 REMARK 3 T TENSOR REMARK 3 T11: 0.0400 T22: 0.0594 REMARK 3 T33: 0.0600 T12: -0.0056 REMARK 3 T13: -0.0024 T23: -0.0083 REMARK 3 L TENSOR REMARK 3 L11: 3.8792 L22: 2.6155 REMARK 3 L33: 2.5470 L12: 0.1214 REMARK 3 L13: -0.7455 L23: -0.5598 REMARK 3 S TENSOR REMARK 3 S11: -0.0246 S12: -0.0118 S13: 0.0926 REMARK 3 S21: 0.0008 S22: 0.0169 S23: 0.0177 REMARK 3 S31: -0.0728 S32: -0.0817 S33: 0.0077 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 967 A 973 REMARK 3 ORIGIN FOR THE GROUP (A): -5.9128 25.3389 42.6929 REMARK 3 T TENSOR REMARK 3 T11: 0.0818 T22: 0.0878 REMARK 3 T33: 0.0776 T12: -0.0030 REMARK 3 T13: 0.0201 T23: 0.0166 REMARK 3 L TENSOR REMARK 3 L11: 4.8463 L22: 12.2587 REMARK 3 L33: 1.3046 L12: -3.0552 REMARK 3 L13: 1.3549 L23: -5.4716 REMARK 3 S TENSOR REMARK 3 S11: -0.0369 S12: -0.0753 S13: 0.1091 REMARK 3 S21: 0.3280 S22: 0.1825 S23: 0.2135 REMARK 3 S31: -0.1703 S32: -0.0699 S33: -0.1455 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 974 A 980 REMARK 3 ORIGIN FOR THE GROUP (A): 1.0362 25.6610 45.8829 REMARK 3 T TENSOR REMARK 3 T11: 0.1995 T22: 0.2045 REMARK 3 T33: 0.1769 T12: -0.0052 REMARK 3 T13: -0.0208 T23: 0.0140 REMARK 3 L TENSOR REMARK 3 L11: 1.8963 L22: 2.1659 REMARK 3 L33: 3.5427 L12: 1.8583 REMARK 3 L13: -0.3470 L23: -3.6249 REMARK 3 S TENSOR REMARK 3 S11: 0.1464 S12: -0.3327 S13: 0.0441 REMARK 3 S21: 0.3397 S22: -0.2879 S23: -0.1317 REMARK 3 S31: -0.0742 S32: 0.3301 S33: 0.1415 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 981 A 988 REMARK 3 ORIGIN FOR THE GROUP (A): 7.8549 31.9892 42.3917 REMARK 3 T TENSOR REMARK 3 T11: 0.0608 T22: 0.1703 REMARK 3 T33: 0.0679 T12: -0.0073 REMARK 3 T13: -0.0259 T23: -0.0144 REMARK 3 L TENSOR REMARK 3 L11: 0.9660 L22: 11.4177 REMARK 3 L33: 11.7817 L12: 3.7840 REMARK 3 L13: -0.9753 L23: -1.7255 REMARK 3 S TENSOR REMARK 3 S11: 0.1151 S12: -0.4125 S13: -0.0293 REMARK 3 S21: 0.1568 S22: -0.0103 S23: -0.3936 REMARK 3 S31: 0.3697 S32: 0.3607 S33: -0.1047 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 989 A 993 REMARK 3 ORIGIN FOR THE GROUP (A): 6.7378 39.9138 37.7875 REMARK 3 T TENSOR REMARK 3 T11: 0.0461 T22: 0.0699 REMARK 3 T33: 0.0896 T12: -0.0120 REMARK 3 T13: -0.0063 T23: -0.0208 REMARK 3 L TENSOR REMARK 3 L11: 9.6186 L22: 7.1219 REMARK 3 L33: 4.5902 L12: 0.3672 REMARK 3 L13: -2.2822 L23: 1.3837 REMARK 3 S TENSOR REMARK 3 S11: 0.0902 S12: -0.3550 S13: 0.6061 REMARK 3 S21: 0.3315 S22: -0.0638 S23: -0.2816 REMARK 3 S31: -0.0908 S32: 0.4036 S33: -0.0264 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 994 A 998 REMARK 3 ORIGIN FOR THE GROUP (A): 10.2101 37.6506 30.8360 REMARK 3 T TENSOR REMARK 3 T11: 0.0968 T22: 0.1189 REMARK 3 T33: 0.0940 T12: 0.0062 REMARK 3 T13: 0.0168 T23: 0.0179 REMARK 3 L TENSOR REMARK 3 L11: 13.9809 L22: 1.1671 REMARK 3 L33: 7.3890 L12: -5.5865 REMARK 3 L13: -5.2186 L23: 1.4778 REMARK 3 S TENSOR REMARK 3 S11: 0.1404 S12: 0.2036 S13: 0.3769 REMARK 3 S21: -0.1146 S22: 0.0893 S23: -0.1297 REMARK 3 S31: -0.4446 S32: 0.0186 S33: -0.2298 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 999 A 1003 REMARK 3 ORIGIN FOR THE GROUP (A): 12.5187 30.9489 31.6424 REMARK 3 T TENSOR REMARK 3 T11: 0.0854 T22: 0.0919 REMARK 3 T33: 0.0626 T12: 0.0001 REMARK 3 T13: 0.0203 T23: -0.0072 REMARK 3 L TENSOR REMARK 3 L11: 5.0247 L22: 8.3404 REMARK 3 L33: 2.9955 L12: 2.5472 REMARK 3 L13: 1.9635 L23: 1.0694 REMARK 3 S TENSOR REMARK 3 S11: -0.1381 S12: 0.3261 S13: -0.1980 REMARK 3 S21: -0.5774 S22: 0.1710 S23: -0.2219 REMARK 3 S31: 0.0226 S32: 0.0990 S33: -0.0329 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1004 A 1008 REMARK 3 ORIGIN FOR THE GROUP (A): 8.2246 23.1084 34.5828 REMARK 3 T TENSOR REMARK 3 T11: 0.0973 T22: 0.0432 REMARK 3 T33: 0.0648 T12: 0.0116 REMARK 3 T13: -0.0034 T23: -0.0080 REMARK 3 L TENSOR REMARK 3 L11: 20.9399 L22: 10.8167 REMARK 3 L33: 5.3584 L12: 9.6864 REMARK 3 L13: -0.9724 L23: -0.0995 REMARK 3 S TENSOR REMARK 3 S11: 0.1213 S12: 0.1191 S13: -0.8877 REMARK 3 S21: 0.2915 S22: -0.0753 S23: -0.5083 REMARK 3 S31: 0.4066 S32: 0.1330 S33: -0.0460 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1009 A 1014 REMARK 3 ORIGIN FOR THE GROUP (A): -0.6459 24.6141 34.1363 REMARK 3 T TENSOR REMARK 3 T11: 0.1174 T22: 0.0973 REMARK 3 T33: 0.0841 T12: -0.0054 REMARK 3 T13: 0.0176 T23: -0.0134 REMARK 3 L TENSOR REMARK 3 L11: 3.5722 L22: 0.3934 REMARK 3 L33: 2.7998 L12: -0.7293 REMARK 3 L13: -1.3249 L23: -1.4134 REMARK 3 S TENSOR REMARK 3 S11: 0.0128 S12: -0.1308 S13: -0.1295 REMARK 3 S21: -0.0124 S22: 0.0330 S23: 0.0819 REMARK 3 S31: -0.0997 S32: -0.1088 S33: -0.0458 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1015 A 1019 REMARK 3 ORIGIN FOR THE GROUP (A): -9.1275 21.2339 24.1135 REMARK 3 T TENSOR REMARK 3 T11: 0.1159 T22: 0.2443 REMARK 3 T33: 0.1686 T12: -0.0466 REMARK 3 T13: -0.0329 T23: -0.0564 REMARK 3 L TENSOR REMARK 3 L11: 16.2256 L22: 7.9297 REMARK 3 L33: 7.8041 L12: 3.9850 REMARK 3 L13: -5.8963 L23: -2.1023 REMARK 3 S TENSOR REMARK 3 S11: 0.1670 S12: 0.2638 S13: -0.2971 REMARK 3 S21: -0.2858 S22: 0.1566 S23: 0.3467 REMARK 3 S31: 0.6597 S32: -1.1905 S33: -0.3236 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1020 A 1026 REMARK 3 ORIGIN FOR THE GROUP (A): -0.3860 24.4115 17.3068 REMARK 3 T TENSOR REMARK 3 T11: 0.0846 T22: 0.1326 REMARK 3 T33: -0.0008 T12: 0.0345 REMARK 3 T13: -0.0137 T23: -0.0228 REMARK 3 L TENSOR REMARK 3 L11: 5.3316 L22: 7.6042 REMARK 3 L33: 7.8195 L12: 1.5429 REMARK 3 L13: -1.9717 L23: 0.7774 REMARK 3 S TENSOR REMARK 3 S11: 0.1172 S12: 0.6100 S13: 0.0696 REMARK 3 S21: -0.2934 S22: 0.0295 S23: 0.0648 REMARK 3 S31: -0.0706 S32: -0.3595 S33: -0.1467 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1027 A 1035 REMARK 3 ORIGIN FOR THE GROUP (A): 6.7192 16.2700 21.1762 REMARK 3 T TENSOR REMARK 3 T11: 0.2862 T22: 0.2374 REMARK 3 T33: 0.2311 T12: 0.1266 REMARK 3 T13: -0.0276 T23: -0.1044 REMARK 3 L TENSOR REMARK 3 L11: 10.3057 L22: 21.6780 REMARK 3 L33: 15.6550 L12: 6.2670 REMARK 3 L13: 0.5297 L23: -10.5488 REMARK 3 S TENSOR REMARK 3 S11: -0.0033 S12: -0.1674 S13: -0.7251 REMARK 3 S21: -0.3052 S22: 0.0855 S23: -0.1547 REMARK 3 S31: 0.9706 S32: 0.4032 S33: -0.0822 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1036 A 1040 REMARK 3 ORIGIN FOR THE GROUP (A): 4.0745 27.1210 16.9582 REMARK 3 T TENSOR REMARK 3 T11: 0.1730 T22: 0.1801 REMARK 3 T33: 0.0895 T12: 0.0109 REMARK 3 T13: 0.0410 T23: 0.0191 REMARK 3 L TENSOR REMARK 3 L11: 7.2074 L22: 9.2656 REMARK 3 L33: 14.9580 L12: 3.0157 REMARK 3 L13: -1.0802 L23: -5.6055 REMARK 3 S TENSOR REMARK 3 S11: 0.0586 S12: 0.8114 S13: 0.5855 REMARK 3 S21: -0.2016 S22: 0.2238 S23: 0.5435 REMARK 3 S31: -0.6847 S32: 0.1900 S33: -0.2824 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1041 A 1047 REMARK 3 ORIGIN FOR THE GROUP (A): 7.5967 26.8909 22.1749 REMARK 3 T TENSOR REMARK 3 T11: 0.1237 T22: 0.1953 REMARK 3 T33: 0.1509 T12: -0.0357 REMARK 3 T13: 0.0199 T23: 0.0170 REMARK 3 L TENSOR REMARK 3 L11: 5.9702 L22: 9.2634 REMARK 3 L33: 30.3771 L12: 2.7049 REMARK 3 L13: -8.2634 L23: -8.7437 REMARK 3 S TENSOR REMARK 3 S11: 0.0261 S12: 0.3535 S13: 0.6156 REMARK 3 S21: -0.7289 S22: -0.0841 S23: -0.3450 REMARK 3 S31: -0.4982 S32: 0.8946 S33: 0.0580 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1048 A 1056 REMARK 3 ORIGIN FOR THE GROUP (A): -4.8110 30.2040 26.9270 REMARK 3 T TENSOR REMARK 3 T11: 0.0699 T22: 0.0925 REMARK 3 T33: 0.0187 T12: 0.0067 REMARK 3 T13: -0.0111 T23: 0.0042 REMARK 3 L TENSOR REMARK 3 L11: 5.9083 L22: 2.3445 REMARK 3 L33: 2.9161 L12: -1.7245 REMARK 3 L13: -2.3331 L23: 1.6826 REMARK 3 S TENSOR REMARK 3 S11: 0.1033 S12: 0.2820 S13: 0.0581 REMARK 3 S21: -0.0347 S22: -0.0761 S23: -0.0176 REMARK 3 S31: -0.0417 S32: -0.1410 S33: -0.0273 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B REMARK 3 FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS REMARK 4 REMARK 4 3L4H COMPLIES WITH FORMAT V. 3.20, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-DEC-09. REMARK 100 THE RCSB ID CODE IS RCSB056821. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-DEC-09 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97899 REMARK 200 MONOCHROMATOR : DOUBLE-CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8513 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06600 REMARK 200 FOR THE DATA SET : 31.0366 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.25600 REMARK 200 FOR SHELL : 5.462 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 29.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: EQUAL VOLUMES OF PROTEIN (10 MG/ML) REMARK 280 [CONTAINING 0.1 MM ACTETIC ACID PH 3.0] WAS MIXED WITH REMARK 280 CRYSTALLIZATION BUFFER (1.0 M SODIUM CITRATE, 0.1 MM IMMIDAZOLE REMARK 280 PH 8.0), ALONG WITH TRYPSIN AT A CONCENTRATION OF 1 MG TRYPSIN/ REMARK 280 500 MG PROTEIN. CRYOPROTECTED WITH 15% GLYCEROL, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 291.1K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 22.04100 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A1022 NE CZ NH1 NH2 REMARK 470 GLN A1030 CG CD OE1 NE2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 2001 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE COMPLETE SEQUENCE USED FOR CRYSTALLIZATION IS: REMARK 999 GSEAESSQSSLDLRREGSLSPVNSQKITLLLQSPAVKFITNPEFFTVLHAN REMARK 999 YSAYRVFTSSTCLKHMILKVRRDARNFERYQHNRDLVNFINMFADTRLELP REMARK 999 RGWEIKTDQQGKSFFVDHNSRATTFIDPRIPLQNG. REMARK 999 THE PROTEIN WAS CRYSTALLIZED IN THE PRESENCE OF TRYPSIN REMARK 999 AND THE ACTUAL CRYSTALLIZED PROTEIN SEQUENCE MAY BE SHORTER. REMARK 999 ONLY THE ORDERED PART OF THE PROTEIN IS REPORTED IN SEQRES REMARK 999 RECORDS. DBREF 3L4H A 948 1056 UNP Q76N89 HECW1_HUMAN 948 1056 SEQRES 1 A 109 LEU LEU LEU GLN SER PRO ALA VAL LYS PHE ILE THR ASN SEQRES 2 A 109 PRO GLU PHE PHE THR VAL LEU HIS ALA ASN TYR SER ALA SEQRES 3 A 109 TYR ARG VAL PHE THR SER SER THR CYS LEU LYS HIS MSE SEQRES 4 A 109 ILE LEU LYS VAL ARG ARG ASP ALA ARG ASN PHE GLU ARG SEQRES 5 A 109 TYR GLN HIS ASN ARG ASP LEU VAL ASN PHE ILE ASN MSE SEQRES 6 A 109 PHE ALA ASP THR ARG LEU GLU LEU PRO ARG GLY TRP GLU SEQRES 7 A 109 ILE LYS THR ASP GLN GLN GLY LYS SER PHE PHE VAL ASP SEQRES 8 A 109 HIS ASN SER ARG ALA THR THR PHE ILE ASP PRO ARG ILE SEQRES 9 A 109 PRO LEU GLN ASN GLY MODRES 3L4H MSE A 986 MET SELENOMETHIONINE MODRES 3L4H MSE A 1012 MET SELENOMETHIONINE HET MSE A 986 16 HET MSE A1012 8 HET ACY A2001 4 HETNAM MSE SELENOMETHIONINE HETNAM ACY ACETIC ACID FORMUL 1 MSE 2(C5 H11 N O2 SE) FORMUL 2 ACY C2 H4 O2 FORMUL 3 HOH *72(H2 O) HELIX 1 1 SER A 952 THR A 959 1 8 HELIX 2 2 GLU A 962 ALA A 969 1 8 HELIX 3 3 ASN A 970 SER A 980 1 11 HELIX 4 4 THR A 981 ASP A 993 1 13 HELIX 5 5 ALA A 994 GLN A 1001 1 8 HELIX 6 6 ASN A 1003 MSE A 1012 1 10 SHEET 1 A 3 TRP A1024 THR A1028 0 SHEET 2 A 3 SER A1034 ASP A1038 -1 O PHE A1035 N LYS A1027 SHEET 3 A 3 ALA A1043 THR A1045 -1 O ALA A1043 N ASP A1038 LINK C HIS A 985 N AMSE A 986 1555 1555 1.32 LINK C HIS A 985 N BMSE A 986 1555 1555 1.32 LINK C AMSE A 986 N ILE A 987 1555 1555 1.33 LINK C BMSE A 986 N ILE A 987 1555 1555 1.33 LINK C ASN A1011 N MSE A1012 1555 1555 1.34 LINK C MSE A1012 N PHE A1013 1555 1555 1.33 SITE 1 AC1 4 ARG A 975 THR A 978 TRP A1024 GLU A1025 CRYST1 26.079 44.082 39.610 90.00 92.54 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.038345 0.000000 0.001701 0.00000 SCALE2 0.000000 0.022685 0.000000 0.00000 SCALE3 0.000000 0.000000 0.025271 0.00000