HEADER OXIDOREDUCTASE 21-DEC-09 3L5A TITLE CRYSTAL STRUCTURE OF A PROBABLE NADH-DEPENDENT FLAVIN OXIDOREDUCTASE TITLE 2 FROM STAPHYLOCOCCUS AUREUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: NADH/FLAVIN OXIDOREDUCTASE/NADH OXIDASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 359787; SOURCE 4 STRAIN: JH1; SOURCE 5 GENE: SAURJH1_0381; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)CODONPLUS RIPL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PW2 KEYWDS OLD YELLOW ENZYME FAMILY, OYE-LIKE FMN-BINDING DOMAIN, TIM BARREL, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR R.LAM,R.D.GORDON,J.VODSEDALEK,K.P.BATTAILE,S.GREBEMESKEL,K.LAM, AUTHOR 2 V.ROMANOV,T.CHAN,V.MIHAJLOVIC,C.M.THOMPSON,J.GUTHRIE,E.F.PAI, AUTHOR 3 N.Y.CHIRGADZE REVDAT 4 30-OCT-24 3L5A 1 REMARK SEQADV LINK REVDAT 3 24-JAN-18 3L5A 1 AUTHOR REVDAT 2 01-NOV-17 3L5A 1 REMARK REVDAT 1 22-DEC-10 3L5A 0 JRNL AUTH R.LAM,R.D.GORDON,J.VODSEDALEK,K.P.BATTAILE,S.GREBEMESKEL, JRNL AUTH 2 K.LAM,V.ROMANOV,T.CHAN,V.MIHAJLOVIC,C.M.THOMPSON,J.GUTHRIE, JRNL AUTH 3 E.F.PAI,N.Y.CHIRGADZE JRNL TITL CRYSTAL STRUCTURE OF A PROBABLE NADH-DEPENDENT FLAVIN JRNL TITL 2 OXIDOREDUCTASE FROM STAPHYLOCOCCUS AUREUS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REFMAC_5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 51815 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.192 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.099 REMARK 3 FREE R VALUE TEST SET COUNT : 2642 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.69 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3463 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.40 REMARK 3 BIN R VALUE (WORKING SET) : 0.2260 REMARK 3 BIN FREE R VALUE SET COUNT : 178 REMARK 3 BIN FREE R VALUE : 0.2630 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2989 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 279 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.02200 REMARK 3 B22 (A**2) : -0.00300 REMARK 3 B33 (A**2) : -0.01900 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.092 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.083 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.954 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3090 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4173 ; 1.252 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 382 ; 5.658 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 145 ;34.899 ;23.862 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 516 ;12.968 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;11.404 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 454 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2349 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1493 ; 0.194 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2133 ; 0.309 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 258 ; 0.113 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 60 ; 0.186 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 30 ; 0.111 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1899 ; 0.714 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3059 ; 1.338 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1191 ; 2.173 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1113 ; 3.618 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL PLUS MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3L5A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JAN-10. REMARK 100 THE DEPOSITION ID IS D_1000056850. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-DEC-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97920 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE-CRYSTAL REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : SI(111) DOUBLE-CRYSTAL REMARK 200 MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51898 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 14.30 REMARK 200 R MERGE (I) : 0.09700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.5 REMARK 200 DATA REDUNDANCY IN SHELL : 11.40 REMARK 200 R MERGE FOR SHELL (I) : 0.40500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHARP, DM 5.0 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG200, 0.1M MES, 5MM I3C, PH 6.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.97050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.36800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.67100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 40.36800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.97050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.67100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 HIS A 382 REMARK 465 THR A 383 REMARK 465 ARG A 384 REMARK 465 ASP A 385 REMARK 465 ALA A 386 REMARK 465 LEU A 387 REMARK 465 ARG A 388 REMARK 465 GLN A 389 REMARK 465 LEU A 390 REMARK 465 GLU A 391 REMARK 465 GLN A 392 REMARK 465 ASN A 393 REMARK 465 TYR A 394 REMARK 465 HIS A 395 REMARK 465 ASP A 396 REMARK 465 SER A 397 REMARK 465 SER A 398 REMARK 465 SER A 399 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 70 -64.53 -97.77 REMARK 500 ASN A 258 58.13 -92.31 REMARK 500 ASN A 308 13.61 -150.65 REMARK 500 SER A 326 -87.28 -103.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 502 DBREF 3L5A A 2 399 UNP A6TYH5 A6TYH5_STAA2 2 399 SEQADV 3L5A MSE A -19 UNP A6TYH5 EXPRESSION TAG SEQADV 3L5A GLY A -18 UNP A6TYH5 EXPRESSION TAG SEQADV 3L5A SER A -17 UNP A6TYH5 EXPRESSION TAG SEQADV 3L5A SER A -16 UNP A6TYH5 EXPRESSION TAG SEQADV 3L5A HIS A -15 UNP A6TYH5 EXPRESSION TAG SEQADV 3L5A HIS A -14 UNP A6TYH5 EXPRESSION TAG SEQADV 3L5A HIS A -13 UNP A6TYH5 EXPRESSION TAG SEQADV 3L5A HIS A -12 UNP A6TYH5 EXPRESSION TAG SEQADV 3L5A HIS A -11 UNP A6TYH5 EXPRESSION TAG SEQADV 3L5A HIS A -10 UNP A6TYH5 EXPRESSION TAG SEQADV 3L5A SER A -9 UNP A6TYH5 EXPRESSION TAG SEQADV 3L5A SER A -8 UNP A6TYH5 EXPRESSION TAG SEQADV 3L5A GLY A -7 UNP A6TYH5 EXPRESSION TAG SEQADV 3L5A LEU A -6 UNP A6TYH5 EXPRESSION TAG SEQADV 3L5A VAL A -5 UNP A6TYH5 EXPRESSION TAG SEQADV 3L5A PRO A -4 UNP A6TYH5 EXPRESSION TAG SEQADV 3L5A ARG A -3 UNP A6TYH5 EXPRESSION TAG SEQADV 3L5A GLY A -2 UNP A6TYH5 EXPRESSION TAG SEQADV 3L5A SER A -1 UNP A6TYH5 EXPRESSION TAG SEQADV 3L5A HIS A 0 UNP A6TYH5 EXPRESSION TAG SEQADV 3L5A MSE A 1 UNP A6TYH5 EXPRESSION TAG SEQRES 1 A 419 MSE GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 419 LEU VAL PRO ARG GLY SER HIS MSE TYR ARG TYR LYS PRO SEQRES 3 A 419 LEU LEU GLN SER ILE HIS LEU PRO ASN GLY ILE LYS ILE SEQRES 4 A 419 SER ASN ARG PHE VAL LEU SER PRO MSE THR VAL ASN ALA SEQRES 5 A 419 SER THR LYS GLU GLY TYR ILE THR LYS ALA ASP LEU ALA SEQRES 6 A 419 TYR ALA ALA ARG ARG SER ASN SER ALA GLY MSE GLN VAL SEQRES 7 A 419 THR GLY ALA ALA TYR ILE GLU PRO TYR GLY LYS LEU PHE SEQRES 8 A 419 GLU TYR GLY PHE ASN ILE ASP HIS ASP ALA CYS ILE PRO SEQRES 9 A 419 GLY LEU THR ASN MSE ALA SER THR MSE LYS GLN HIS GLY SEQRES 10 A 419 SER LEU ALA ILE ILE GLN LEU ALA HIS ALA GLY ARG PHE SEQRES 11 A 419 SER ASN GLN ALA ILE LEU ASN PHE GLY LYS VAL TYR GLY SEQRES 12 A 419 PRO SER PRO MSE THR LEU HIS SER PRO ILE GLU HIS VAL SEQRES 13 A 419 VAL ILE ALA MSE SER HIS GLU LYS ILE ASN SER ILE ILE SEQRES 14 A 419 GLN GLN TYR ARG ASP ALA THR LEU ARG ALA ILE LYS ALA SEQRES 15 A 419 GLY PHE ASP GLY VAL GLU ILE SER ILE ALA GLN ARG LEU SEQRES 16 A 419 LEU ILE GLN THR PHE PHE SER THR PHE SER ASN ARG ARG SEQRES 17 A 419 THR ASP HIS TYR GLY ALA ASP SER LEU LYS ASN ARG ALA SEQRES 18 A 419 ARG LEU CYS LEU GLU VAL MSE ARG ALA VAL GLN GLU VAL SEQRES 19 A 419 ILE ASP LYS GLU ALA PRO ASP ASN PHE ILE LEU GLY PHE SEQRES 20 A 419 ARG ALA THR PRO GLU GLU THR ARG GLY SER ASP LEU GLY SEQRES 21 A 419 TYR THR ILE ASP GLU PHE ASN GLN LEU ILE ASP TRP VAL SEQRES 22 A 419 MSE ASP VAL SER ASN ILE GLN TYR LEU ALA ILE ALA SER SEQRES 23 A 419 TRP GLY ARG HIS ILE TYR GLN ASN THR SER ARG THR PRO SEQRES 24 A 419 GLY ASP HIS PHE GLY ARG PRO VAL ASN GLN ILE VAL TYR SEQRES 25 A 419 GLU HIS LEU ALA GLY ARG ILE PRO LEU ILE ALA SER GLY SEQRES 26 A 419 GLY ILE ASN SER PRO GLU SER ALA LEU ASP ALA LEU GLN SEQRES 27 A 419 HIS ALA ASP MSE VAL GLY MSE SER SER PRO PHE VAL THR SEQRES 28 A 419 GLU PRO ASP PHE VAL HIS LYS LEU ALA GLU GLN ARG PRO SEQRES 29 A 419 HIS ASP ILE ASN LEU GLU PHE SER MSE ALA ASP LEU GLU SEQRES 30 A 419 ASP LEU ALA ILE PRO HIS ALA ALA PHE LYS ASP ILE VAL SEQRES 31 A 419 LYS MSE MSE ASP TYR GLY GLU GLY LEU LYS LYS HIS THR SEQRES 32 A 419 ARG ASP ALA LEU ARG GLN LEU GLU GLN ASN TYR HIS ASP SEQRES 33 A 419 SER SER SER MODRES 3L5A MSE A 1 MET SELENOMETHIONINE MODRES 3L5A MSE A 28 MET SELENOMETHIONINE MODRES 3L5A MSE A 56 MET SELENOMETHIONINE MODRES 3L5A MSE A 89 MET SELENOMETHIONINE MODRES 3L5A MSE A 93 MET SELENOMETHIONINE MODRES 3L5A MSE A 127 MET SELENOMETHIONINE MODRES 3L5A MSE A 140 MET SELENOMETHIONINE MODRES 3L5A MSE A 208 MET SELENOMETHIONINE MODRES 3L5A MSE A 254 MET SELENOMETHIONINE MODRES 3L5A MSE A 322 MET SELENOMETHIONINE MODRES 3L5A MSE A 325 MET SELENOMETHIONINE MODRES 3L5A MSE A 353 MET SELENOMETHIONINE MODRES 3L5A MSE A 372 MET SELENOMETHIONINE MODRES 3L5A MSE A 373 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 28 8 HET MSE A 56 8 HET MSE A 89 8 HET MSE A 93 8 HET MSE A 127 8 HET MSE A 140 8 HET MSE A 208 8 HET MSE A 254 8 HET MSE A 322 8 HET MSE A 325 8 HET MSE A 353 8 HET MSE A 372 8 HET MSE A 373 8 HET PGE A 500 10 HET PGE A 501 10 HET PGE A 502 10 HETNAM MSE SELENOMETHIONINE HETNAM PGE TRIETHYLENE GLYCOL FORMUL 1 MSE 14(C5 H11 N O2 SE) FORMUL 2 PGE 3(C6 H14 O4) FORMUL 5 HOH *279(H2 O) HELIX 1 1 TYR A 4 GLN A 9 5 6 HELIX 2 2 THR A 40 ARG A 50 1 11 HELIX 3 3 GLU A 65 LYS A 69 5 5 HELIX 4 4 HIS A 79 ALA A 81 5 3 HELIX 5 5 CYS A 82 GLN A 95 1 14 HELIX 6 6 ALA A 107 PHE A 110 5 4 HELIX 7 7 SER A 111 GLY A 119 1 9 HELIX 8 8 SER A 141 ALA A 162 1 22 HELIX 9 9 LEU A 175 SER A 182 1 8 HELIX 10 10 SER A 196 ALA A 219 1 24 HELIX 11 11 THR A 242 SER A 257 1 16 HELIX 12 12 HIS A 270 ASN A 274 5 5 HELIX 13 13 PRO A 286 ALA A 296 1 11 HELIX 14 14 SER A 309 LEU A 317 1 9 HELIX 15 15 GLN A 318 ALA A 320 5 3 HELIX 16 16 SER A 327 GLU A 332 1 6 HELIX 17 17 ASP A 334 GLU A 341 1 8 HELIX 18 18 ARG A 343 ILE A 347 5 5 HELIX 19 19 SER A 352 LEU A 356 5 5 HELIX 20 20 ALA A 365 GLY A 376 1 12 SHEET 1 A 2 ILE A 11 HIS A 12 0 SHEET 2 A 2 LYS A 18 ILE A 19 -1 O ILE A 19 N ILE A 11 SHEET 1 B10 PHE A 75 ASN A 76 0 SHEET 2 B10 MSE A 56 TYR A 63 1 N TYR A 63 O PHE A 75 SHEET 3 B10 LEU A 99 ALA A 105 1 O ILE A 101 N GLN A 57 SHEET 4 B10 GLY A 166 SER A 170 1 O GLU A 168 N LEU A 104 SHEET 5 B10 ILE A 224 ALA A 229 1 O GLY A 226 N VAL A 167 SHEET 6 B10 LEU A 262 ILE A 264 1 O ALA A 263 N PHE A 227 SHEET 7 B10 LEU A 301 ALA A 303 1 O ILE A 302 N LEU A 262 SHEET 8 B10 MSE A 322 MSE A 325 1 O GLY A 324 N ALA A 303 SHEET 9 B10 PHE A 23 LEU A 25 1 N VAL A 24 O VAL A 323 SHEET 10 B10 MSE A 56 TYR A 63 1 O VAL A 58 N LEU A 25 SHEET 1 C 3 LYS A 120 GLY A 123 0 SHEET 2 C 3 HIS A 135 ALA A 139 1 O ILE A 138 N VAL A 121 SHEET 3 C 3 MSE A 127 LEU A 129 -1 N MSE A 127 O VAL A 137 SHEET 1 D 2 GLU A 233 ARG A 235 0 SHEET 2 D 2 ASP A 238 TYR A 241 -1 O GLY A 240 N GLU A 233 LINK C MSE A 1 N TYR A 2 1555 1555 1.33 LINK C PRO A 27 N MSE A 28 1555 1555 1.32 LINK C MSE A 28 N THR A 29 1555 1555 1.32 LINK C GLY A 55 N MSE A 56 1555 1555 1.33 LINK C MSE A 56 N GLN A 57 1555 1555 1.33 LINK C ASN A 88 N MSE A 89 1555 1555 1.33 LINK C MSE A 89 N ALA A 90 1555 1555 1.33 LINK C THR A 92 N MSE A 93 1555 1555 1.32 LINK C MSE A 93 N LYS A 94 1555 1555 1.34 LINK C PRO A 126 N MSE A 127 1555 1555 1.33 LINK C MSE A 127 N THR A 128 1555 1555 1.33 LINK C ALA A 139 N MSE A 140 1555 1555 1.33 LINK C MSE A 140 N SER A 141 1555 1555 1.33 LINK C VAL A 207 N MSE A 208 1555 1555 1.33 LINK C MSE A 208 N ARG A 209 1555 1555 1.33 LINK C VAL A 253 N MSE A 254 1555 1555 1.33 LINK C MSE A 254 N ASP A 255 1555 1555 1.33 LINK C ASP A 321 N MSE A 322 1555 1555 1.33 LINK C MSE A 322 N VAL A 323 1555 1555 1.33 LINK C GLY A 324 N MSE A 325 1555 1555 1.33 LINK C MSE A 325 N SER A 326 1555 1555 1.33 LINK C SER A 352 N MSE A 353 1555 1555 1.33 LINK C MSE A 353 N ALA A 354 1555 1555 1.34 LINK C LYS A 371 N MSE A 372 1555 1555 1.33 LINK C MSE A 372 N MSE A 373 1555 1555 1.33 LINK C MSE A 373 N ASP A 374 1555 1555 1.33 CISPEP 1 SER A 131 PRO A 132 0 -1.20 SITE 1 AC1 8 SER A 20 ASN A 21 ASN A 52 SER A 53 SITE 2 AC1 8 ALA A 54 HIS A 337 HOH A 628 HOH A 642 SITE 1 AC2 9 ILE A 138 ALA A 139 ASP A 251 HIS A 294 SITE 2 AC2 9 ARG A 298 HOH A 425 HOH A 459 HOH A 497 SITE 3 AC2 9 HOH A 635 SITE 1 AC3 9 ASN A 88 SER A 91 THR A 92 GLN A 95 SITE 2 AC3 9 PHE A 283 GLY A 284 ARG A 285 HOH A 603 SITE 3 AC3 9 HOH A 677 CRYST1 69.941 75.342 80.736 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014298 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013273 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012386 0.00000 HETATM 1 N MSE A 1 49.370 102.161 29.723 1.00 38.02 N HETATM 2 CA MSE A 1 49.869 100.930 29.039 1.00 37.32 C HETATM 3 C MSE A 1 49.125 99.661 29.478 1.00 34.89 C HETATM 4 O MSE A 1 49.194 99.237 30.637 1.00 35.05 O HETATM 5 CB MSE A 1 51.381 100.775 29.228 1.00 39.17 C HETATM 6 CG MSE A 1 52.032 99.779 28.260 1.00 44.98 C HETATM 7 SE MSE A 1 52.438 100.560 26.502 0.75 60.15 SE HETATM 8 CE MSE A 1 50.629 100.702 25.738 1.00 55.77 C