data_3L78 # _entry.id 3L78 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3L78 RCSB RCSB056920 WWPDB D_1000056920 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3L78 _pdbx_database_status.recvd_initial_deposition_date 2009-12-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Liu, X.' 1 'Fu, T.M.' 2 'Su, X.-D.' 3 # _citation.id primary _citation.title 'The crystal structure of SMU.1142c from Streptococcus mutans UA159' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Liu, X.' 1 primary 'Fu, T.M.' 2 primary 'Su, X.-D.' 3 # _cell.entry_id 3L78 _cell.length_a 45.565 _cell.length_b 47.473 _cell.length_c 56.396 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3L78 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Regulatory protein spx' 14047.194 1 ? ? 'residues 1-120' ? 2 water nat water 18.015 46 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'putative transcriptional factor SpxA' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MVTLFLSPSCTSCRKARAWLNRHDVVFQEHNIMTSPLSRDELLKILSYTENGTEDIISTRSKVFQKLDIDVDELSVSELI NLISKNPSLLRRPIIMDNKRMQIGFNEDEIRAFLPRDYRK ; _entity_poly.pdbx_seq_one_letter_code_can ;MVTLFLSPSCTSCRKARAWLNRHDVVFQEHNIMTSPLSRDELLKILSYTENGTEDIISTRSKVFQKLDIDVDELSVSELI NLISKNPSLLRRPIIMDNKRMQIGFNEDEIRAFLPRDYRK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 VAL n 1 3 THR n 1 4 LEU n 1 5 PHE n 1 6 LEU n 1 7 SER n 1 8 PRO n 1 9 SER n 1 10 CYS n 1 11 THR n 1 12 SER n 1 13 CYS n 1 14 ARG n 1 15 LYS n 1 16 ALA n 1 17 ARG n 1 18 ALA n 1 19 TRP n 1 20 LEU n 1 21 ASN n 1 22 ARG n 1 23 HIS n 1 24 ASP n 1 25 VAL n 1 26 VAL n 1 27 PHE n 1 28 GLN n 1 29 GLU n 1 30 HIS n 1 31 ASN n 1 32 ILE n 1 33 MET n 1 34 THR n 1 35 SER n 1 36 PRO n 1 37 LEU n 1 38 SER n 1 39 ARG n 1 40 ASP n 1 41 GLU n 1 42 LEU n 1 43 LEU n 1 44 LYS n 1 45 ILE n 1 46 LEU n 1 47 SER n 1 48 TYR n 1 49 THR n 1 50 GLU n 1 51 ASN n 1 52 GLY n 1 53 THR n 1 54 GLU n 1 55 ASP n 1 56 ILE n 1 57 ILE n 1 58 SER n 1 59 THR n 1 60 ARG n 1 61 SER n 1 62 LYS n 1 63 VAL n 1 64 PHE n 1 65 GLN n 1 66 LYS n 1 67 LEU n 1 68 ASP n 1 69 ILE n 1 70 ASP n 1 71 VAL n 1 72 ASP n 1 73 GLU n 1 74 LEU n 1 75 SER n 1 76 VAL n 1 77 SER n 1 78 GLU n 1 79 LEU n 1 80 ILE n 1 81 ASN n 1 82 LEU n 1 83 ILE n 1 84 SER n 1 85 LYS n 1 86 ASN n 1 87 PRO n 1 88 SER n 1 89 LEU n 1 90 LEU n 1 91 ARG n 1 92 ARG n 1 93 PRO n 1 94 ILE n 1 95 ILE n 1 96 MET n 1 97 ASP n 1 98 ASN n 1 99 LYS n 1 100 ARG n 1 101 MET n 1 102 GLN n 1 103 ILE n 1 104 GLY n 1 105 PHE n 1 106 ASN n 1 107 GLU n 1 108 ASP n 1 109 GLU n 1 110 ILE n 1 111 ARG n 1 112 ALA n 1 113 PHE n 1 114 LEU n 1 115 PRO n 1 116 ARG n 1 117 ASP n 1 118 TYR n 1 119 ARG n 1 120 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'SMU.1142c (AMINO ACIDS 1-120)' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain UA159 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptococcus mutans' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 210007 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET21b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SPX_STRMU _struct_ref.pdbx_db_accession Q8DU17 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MVTLFLSPSCTSCRKARAWLNRHDVVFQEHNIMTSPLSRDELLKILSYTENGTEDIISTRSKVFQKLDIDVDELSVSELI NLISKNPSLLRRPIIMDNKRMQIGFNEDEIRAFLPRDYRK ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3L78 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 120 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8DU17 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 120 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 120 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3L78 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.17 _exptl_crystal.density_percent_sol 43.35 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '0.85 NaNO3, 0.1M NaCAD pH 6.5, 15% PEG 3350, VAPOR DIFFUSION, SITTING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2009-12-16 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'BSRF BEAMLINE 3W1A' _diffrn_source.pdbx_synchrotron_site BSRF _diffrn_source.pdbx_synchrotron_beamline 3W1A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0000 # _reflns.entry_id 3L78 _reflns.d_resolution_high 1.900 _reflns.d_resolution_low 50.000 _reflns.pdbx_number_measured_all 134385 _reflns.number_all 10132 _reflns.number_obs 9865 _reflns.pdbx_Rmerge_I_obs 0.070 _reflns.pdbx_netI_over_av_sigmaI 51.994 _reflns.pdbx_netI_over_sigmaI 10.700 _reflns.pdbx_chi_squared 1.064 _reflns.pdbx_redundancy 13.300 _reflns.percent_possible_obs 99.900 _reflns.pdbx_Rrim_I_all 0.070 _reflns.B_iso_Wilson_estimate 26.50 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.pdbx_Rsym_value ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 1.90 1.93 ? ? ? ? 0.319 ? ? 0.502 8.80 ? ? ? 487 ? ? ? ? 98.80 ? ? ? 1 1.93 1.97 ? ? ? ? 0.305 ? ? 0.650 9.70 ? ? ? 477 ? ? ? ? 99.80 ? ? ? 2 1.97 2.01 ? ? ? ? 0.287 ? ? 0.532 11.00 ? ? ? 494 ? ? ? ? 100.00 ? ? ? 3 2.01 2.05 ? ? ? ? 0.237 ? ? 0.578 11.80 ? ? ? 506 ? ? ? ? 100.00 ? ? ? 4 2.05 2.09 ? ? ? ? 0.194 ? ? 0.646 12.60 ? ? ? 494 ? ? ? ? 99.80 ? ? ? 5 2.09 2.14 ? ? ? ? 0.190 ? ? 0.670 13.20 ? ? ? 498 ? ? ? ? 100.00 ? ? ? 6 2.14 2.19 ? ? ? ? 0.172 ? ? 0.698 13.60 ? ? ? 500 ? ? ? ? 100.00 ? ? ? 7 2.19 2.25 ? ? ? ? 0.159 ? ? 0.727 14.20 ? ? ? 498 ? ? ? ? 100.00 ? ? ? 8 2.25 2.32 ? ? ? ? 0.141 ? ? 0.746 14.30 ? ? ? 484 ? ? ? ? 100.00 ? ? ? 9 2.32 2.39 ? ? ? ? 0.128 ? ? 0.798 14.40 ? ? ? 521 ? ? ? ? 100.00 ? ? ? 10 2.39 2.48 ? ? ? ? 0.119 ? ? 0.804 14.60 ? ? ? 492 ? ? ? ? 100.00 ? ? ? 11 2.48 2.58 ? ? ? ? 0.105 ? ? 0.846 14.40 ? ? ? 498 ? ? ? ? 100.00 ? ? ? 12 2.58 2.70 ? ? ? ? 0.099 ? ? 0.936 14.40 ? ? ? 511 ? ? ? ? 100.00 ? ? ? 13 2.70 2.84 ? ? ? ? 0.086 ? ? 1.052 14.40 ? ? ? 506 ? ? ? ? 100.00 ? ? ? 14 2.84 3.02 ? ? ? ? 0.076 ? ? 1.164 14.50 ? ? ? 506 ? ? ? ? 100.00 ? ? ? 15 3.02 3.25 ? ? ? ? 0.064 ? ? 1.400 14.40 ? ? ? 512 ? ? ? ? 100.00 ? ? ? 16 3.25 3.58 ? ? ? ? 0.058 ? ? 1.644 14.20 ? ? ? 510 ? ? ? ? 100.00 ? ? ? 17 3.58 4.09 ? ? ? ? 0.052 ? ? 1.906 14.10 ? ? ? 531 ? ? ? ? 100.00 ? ? ? 18 4.09 5.16 ? ? ? ? 0.050 ? ? 2.165 13.80 ? ? ? 528 ? ? ? ? 100.00 ? ? ? 19 5.16 50.00 ? ? ? ? 0.049 ? ? 2.034 12.30 ? ? ? 579 ? ? ? ? 99.70 ? ? ? 20 # _refine.entry_id 3L78 _refine.ls_d_res_high 1.900 _refine.ls_d_res_low 36.318 _refine.pdbx_ls_sigma_F 0.10 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 97.370 _refine.ls_number_reflns_obs 9828 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method ? _refine.ls_matrix_type ? _refine.pdbx_R_Free_selection_details ? _refine.details ? _refine.ls_R_factor_obs 0.1909 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1864 _refine.ls_R_factor_R_free 0.2317 _refine.ls_percent_reflns_R_free 10.180 _refine.ls_number_reflns_R_free 1000 _refine.ls_number_reflns_R_work 8828 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 33.022 _refine.solvent_model_param_bsol 57.454 _refine.solvent_model_param_ksol 0.377 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -1.068 _refine.aniso_B[2][2] 8.912 _refine.aniso_B[3][3] -7.844 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] -0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.290 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.110 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.900 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB ENTRY 1Z3E' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.863 _refine.B_iso_max 86.04 _refine.B_iso_min 13.37 _refine.pdbx_overall_phase_error 19.890 _refine.occupancy_max 1.00 _refine.occupancy_min 0.50 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 934 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 46 _refine_hist.number_atoms_total 980 _refine_hist.d_res_high 1.900 _refine_hist.d_res_low 36.318 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.004 ? ? 972 'X-RAY DIFFRACTION' ? f_angle_d 0.813 ? ? 1317 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 15.555 ? ? 375 'X-RAY DIFFRACTION' ? f_chiral_restr 0.056 ? ? 155 'X-RAY DIFFRACTION' ? f_plane_restr 0.003 ? ? 171 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.9000 2.0002 1158 0.1923 93.00 0.2877 . . 139 . . . . 'X-RAY DIFFRACTION' . 2.0002 2.1255 1217 0.1643 96.00 0.2404 . . 133 . . . . 'X-RAY DIFFRACTION' . 2.1255 2.2896 1235 0.1603 96.00 0.2018 . . 142 . . . . 'X-RAY DIFFRACTION' . 2.2896 2.5199 1255 0.1719 98.00 0.2366 . . 140 . . . . 'X-RAY DIFFRACTION' . 2.5199 2.8844 1283 0.2062 99.00 0.2461 . . 140 . . . . 'X-RAY DIFFRACTION' . 2.8844 3.6335 1300 0.1883 99.00 0.2634 . . 151 . . . . 'X-RAY DIFFRACTION' . 3.6335 36.3251 1380 0.1858 100.00 0.2020 . . 155 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 3L78 _struct.title 'The crystal structure of SMU.1142C from Streptococcus mutans UA159' _struct.pdbx_descriptor 'Regulatory protein spx' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3L78 _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text 'transcription, transcriptional factor, STREPTOCOCCUS MUTANS, Disulfide bond, Redox-active center, Transcription regulation' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 CYS A 10 ? HIS A 23 ? CYS A 10 HIS A 23 1 ? 14 HELX_P HELX_P2 2 SER A 38 ? THR A 49 ? SER A 38 THR A 49 1 ? 12 HELX_P HELX_P3 3 GLY A 52 ? ILE A 57 ? GLY A 52 ILE A 57 1 ? 6 HELX_P HELX_P4 4 SER A 61 ? LEU A 67 ? SER A 61 LEU A 67 1 ? 7 HELX_P HELX_P5 5 ASP A 70 ? LEU A 74 ? ASP A 70 LEU A 74 5 ? 5 HELX_P HELX_P6 6 SER A 75 ? ASN A 86 ? SER A 75 ASN A 86 1 ? 12 HELX_P HELX_P7 7 PRO A 87 ? LEU A 90 ? PRO A 87 LEU A 90 5 ? 4 HELX_P HELX_P8 8 ASP A 108 ? LEU A 114 ? ASP A 108 LEU A 114 5 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 10 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 13 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 10 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 13 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.042 _struct_conn.pdbx_value_order ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ARG _struct_mon_prot_cis.label_seq_id 92 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ARG _struct_mon_prot_cis.auth_seq_id 92 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 93 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 93 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -5.66 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 27 ? ASN A 31 ? PHE A 27 ASN A 31 A 2 VAL A 2 ? LEU A 6 ? VAL A 2 LEU A 6 A 3 ILE A 94 ? MET A 96 ? ILE A 94 MET A 96 A 4 MET A 101 ? ILE A 103 ? MET A 101 ILE A 103 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O HIS A 30 ? O HIS A 30 N LEU A 4 ? N LEU A 4 A 2 3 N PHE A 5 ? N PHE A 5 O ILE A 94 ? O ILE A 94 A 3 4 N ILE A 95 ? N ILE A 95 O GLN A 102 ? O GLN A 102 # _database_PDB_matrix.entry_id 3L78 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3L78 _atom_sites.fract_transf_matrix[1][1] 0.021947 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021065 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017732 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 VAL 2 2 2 VAL VAL A . n A 1 3 THR 3 3 3 THR THR A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 PHE 5 5 5 PHE PHE A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 SER 7 7 7 SER SER A . n A 1 8 PRO 8 8 8 PRO PRO A . n A 1 9 SER 9 9 9 SER SER A . n A 1 10 CYS 10 10 10 CYS CYS A . n A 1 11 THR 11 11 11 THR THR A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 CYS 13 13 13 CYS CYS A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 ARG 17 17 17 ARG ARG A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 TRP 19 19 19 TRP TRP A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 ASN 21 21 21 ASN ASN A . n A 1 22 ARG 22 22 22 ARG ARG A . n A 1 23 HIS 23 23 23 HIS HIS A . n A 1 24 ASP 24 24 24 ASP ASP A . n A 1 25 VAL 25 25 25 VAL VAL A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 PHE 27 27 27 PHE PHE A . n A 1 28 GLN 28 28 28 GLN GLN A . n A 1 29 GLU 29 29 29 GLU GLU A . n A 1 30 HIS 30 30 30 HIS HIS A . n A 1 31 ASN 31 31 31 ASN ASN A . n A 1 32 ILE 32 32 32 ILE ILE A . n A 1 33 MET 33 33 33 MET MET A . n A 1 34 THR 34 34 34 THR THR A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 PRO 36 36 36 PRO PRO A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 SER 38 38 38 SER SER A . n A 1 39 ARG 39 39 39 ARG ARG A . n A 1 40 ASP 40 40 40 ASP ASP A . n A 1 41 GLU 41 41 41 GLU GLU A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 LYS 44 44 44 LYS LYS A . n A 1 45 ILE 45 45 45 ILE ILE A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 SER 47 47 47 SER SER A . n A 1 48 TYR 48 48 48 TYR TYR A . n A 1 49 THR 49 49 49 THR THR A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 THR 53 53 53 THR THR A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 ASP 55 55 55 ASP ASP A . n A 1 56 ILE 56 56 56 ILE ILE A . n A 1 57 ILE 57 57 57 ILE ILE A . n A 1 58 SER 58 58 58 SER SER A . n A 1 59 THR 59 59 59 THR THR A . n A 1 60 ARG 60 60 60 ARG ARG A . n A 1 61 SER 61 61 61 SER SER A . n A 1 62 LYS 62 62 62 LYS LYS A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 PHE 64 64 64 PHE PHE A . n A 1 65 GLN 65 65 65 GLN GLN A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 ASP 68 68 68 ASP ASP A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 ASP 70 70 70 ASP ASP A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 ASP 72 72 72 ASP ASP A . n A 1 73 GLU 73 73 73 GLU GLU A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 SER 75 75 75 SER SER A . n A 1 76 VAL 76 76 76 VAL VAL A . n A 1 77 SER 77 77 77 SER SER A . n A 1 78 GLU 78 78 78 GLU GLU A . n A 1 79 LEU 79 79 79 LEU LEU A . n A 1 80 ILE 80 80 80 ILE ILE A . n A 1 81 ASN 81 81 81 ASN ASN A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 ILE 83 83 83 ILE ILE A . n A 1 84 SER 84 84 84 SER SER A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 ASN 86 86 86 ASN ASN A . n A 1 87 PRO 87 87 87 PRO PRO A . n A 1 88 SER 88 88 88 SER SER A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 ARG 91 91 91 ARG ARG A . n A 1 92 ARG 92 92 92 ARG ARG A . n A 1 93 PRO 93 93 93 PRO PRO A . n A 1 94 ILE 94 94 94 ILE ILE A . n A 1 95 ILE 95 95 95 ILE ILE A . n A 1 96 MET 96 96 96 MET MET A . n A 1 97 ASP 97 97 97 ASP ASP A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 LYS 99 99 99 LYS LYS A . n A 1 100 ARG 100 100 100 ARG ARG A . n A 1 101 MET 101 101 101 MET MET A . n A 1 102 GLN 102 102 102 GLN GLN A . n A 1 103 ILE 103 103 103 ILE ILE A . n A 1 104 GLY 104 104 104 GLY GLY A . n A 1 105 PHE 105 105 105 PHE PHE A . n A 1 106 ASN 106 106 106 ASN ASN A . n A 1 107 GLU 107 107 107 GLU GLU A . n A 1 108 ASP 108 108 108 ASP ASP A . n A 1 109 GLU 109 109 109 GLU GLU A . n A 1 110 ILE 110 110 110 ILE ILE A . n A 1 111 ARG 111 111 111 ARG ARG A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 PHE 113 113 113 PHE PHE A . n A 1 114 LEU 114 114 114 LEU LEU A . n A 1 115 PRO 115 115 115 PRO PRO A . n A 1 116 ARG 116 116 116 ARG ARG A . n A 1 117 ASP 117 117 117 ASP ASP A . n A 1 118 TYR 118 118 ? ? ? A . n A 1 119 ARG 119 119 ? ? ? A . n A 1 120 LYS 120 120 ? ? ? A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-12-08 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Version format compliance' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -1.8340 _pdbx_refine_tls.origin_y -5.7840 _pdbx_refine_tls.origin_z 3.7930 _pdbx_refine_tls.T[1][1] 0.1273 _pdbx_refine_tls.T[2][2] 0.1431 _pdbx_refine_tls.T[3][3] 0.1188 _pdbx_refine_tls.T[1][2] -0.0021 _pdbx_refine_tls.T[1][3] -0.0081 _pdbx_refine_tls.T[2][3] 0.0053 _pdbx_refine_tls.L[1][1] 0.6367 _pdbx_refine_tls.L[2][2] 0.6599 _pdbx_refine_tls.L[3][3] -0.0203 _pdbx_refine_tls.L[1][2] -0.3010 _pdbx_refine_tls.L[1][3] 0.1980 _pdbx_refine_tls.L[2][3] 0.0859 _pdbx_refine_tls.S[1][1] -0.0925 _pdbx_refine_tls.S[2][2] 0.0459 _pdbx_refine_tls.S[3][3] 0.0306 _pdbx_refine_tls.S[1][2] -0.0775 _pdbx_refine_tls.S[1][3] -0.0351 _pdbx_refine_tls.S[2][3] 0.0214 _pdbx_refine_tls.S[2][1] 0.0590 _pdbx_refine_tls.S[3][1] -0.0929 _pdbx_refine_tls.S[3][2] 0.0332 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 1 A 117 all ? ? ? ? ? 'X-RAY DIFFRACTION' 2 1 A 1 A 167 all ? ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 MOLREP phasing . ? 2 PHENIX refinement '(phenix.refine)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id SER _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 58 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -69.54 _pdbx_validate_torsion.psi 76.51 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 62 ? CE ? A LYS 62 CE 2 1 Y 1 A LYS 62 ? NZ ? A LYS 62 NZ 3 1 Y 1 A GLN 65 ? CG ? A GLN 65 CG 4 1 Y 1 A GLN 65 ? CD ? A GLN 65 CD 5 1 Y 1 A GLN 65 ? OE1 ? A GLN 65 OE1 6 1 Y 1 A GLN 65 ? NE2 ? A GLN 65 NE2 7 1 Y 1 A LYS 85 ? CG ? A LYS 85 CG 8 1 Y 1 A LYS 85 ? CD ? A LYS 85 CD 9 1 Y 1 A LYS 85 ? CE ? A LYS 85 CE 10 1 Y 1 A LYS 85 ? NZ ? A LYS 85 NZ 11 1 Y 1 A ARG 116 ? CG ? A ARG 116 CG 12 1 Y 1 A ARG 116 ? CD ? A ARG 116 CD 13 1 Y 1 A ARG 116 ? NE ? A ARG 116 NE 14 1 Y 1 A ARG 116 ? CZ ? A ARG 116 CZ 15 1 Y 1 A ARG 116 ? NH1 ? A ARG 116 NH1 16 1 Y 1 A ARG 116 ? NH2 ? A ARG 116 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A TYR 118 ? A TYR 118 2 1 Y 1 A ARG 119 ? A ARG 119 3 1 Y 1 A LYS 120 ? A LYS 120 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 121 121 HOH HOH A . B 2 HOH 2 122 122 HOH HOH A . B 2 HOH 3 123 123 HOH HOH A . B 2 HOH 4 124 124 HOH HOH A . B 2 HOH 5 125 125 HOH HOH A . B 2 HOH 6 126 126 HOH HOH A . B 2 HOH 7 127 127 HOH HOH A . B 2 HOH 8 128 128 HOH HOH A . B 2 HOH 9 129 129 HOH HOH A . B 2 HOH 10 130 130 HOH HOH A . B 2 HOH 11 131 131 HOH HOH A . B 2 HOH 12 132 132 HOH HOH A . B 2 HOH 13 133 133 HOH HOH A . B 2 HOH 14 134 134 HOH HOH A . B 2 HOH 15 135 135 HOH HOH A . B 2 HOH 16 136 136 HOH HOH A . B 2 HOH 17 137 137 HOH HOH A . B 2 HOH 18 138 138 HOH HOH A . B 2 HOH 19 139 139 HOH HOH A . B 2 HOH 20 140 140 HOH HOH A . B 2 HOH 21 141 141 HOH HOH A . B 2 HOH 22 142 142 HOH HOH A . B 2 HOH 23 143 143 HOH HOH A . B 2 HOH 24 144 144 HOH HOH A . B 2 HOH 25 145 145 HOH HOH A . B 2 HOH 26 146 146 HOH HOH A . B 2 HOH 27 147 147 HOH HOH A . B 2 HOH 28 148 148 HOH HOH A . B 2 HOH 29 149 149 HOH HOH A . B 2 HOH 30 150 150 HOH HOH A . B 2 HOH 31 151 151 HOH HOH A . B 2 HOH 32 152 152 HOH HOH A . B 2 HOH 33 154 154 HOH HOH A . B 2 HOH 34 155 155 HOH HOH A . B 2 HOH 35 156 156 HOH HOH A . B 2 HOH 36 157 157 HOH HOH A . B 2 HOH 37 158 158 HOH HOH A . B 2 HOH 38 159 159 HOH HOH A . B 2 HOH 39 160 160 HOH HOH A . B 2 HOH 40 161 161 HOH HOH A . B 2 HOH 41 162 162 HOH HOH A . B 2 HOH 42 163 163 HOH HOH A . B 2 HOH 43 164 164 HOH HOH A . B 2 HOH 44 165 165 HOH HOH A . B 2 HOH 45 166 166 HOH HOH A . B 2 HOH 46 167 167 HOH HOH A . #