HEADER TRANSFERASE 04-JAN-10 3L8U TITLE CRYSTAL STRUCTURE OF SMU.1707C, A PUTATIVE RRNA METHYLTRANSFERASE FROM TITLE 2 STREPTOCOCCUS MUTANS UA159 CAVEAT 3L8U CHIRALITY ERROR AT THE CB CENTER OF THR A 153 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE RRNA METHYLASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: SMU.1707C; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS MUTANS; SOURCE 3 ORGANISM_TAXID: 210007; SOURCE 4 STRAIN: UA159; SOURCE 5 GENE: SMU_1707C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS STREPTOCOCCUS MUTANS, METHYLTRANSFERASE, KNOTTED PROTEIN, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR X.-Z.GAO,K.-T.WANG,X.-D.SU REVDAT 2 01-NOV-23 3L8U 1 SEQADV REVDAT 1 05-JAN-11 3L8U 0 JRNL AUTH X.-Z.GAO,K.-T.WANG,X.-D.SU JRNL TITL CRYSTAL STRUCTURE OF SMU.1707C, A PUTATIVE RRNA JRNL TITL 2 METHYLTRANSFERASE FROM STREPTOCOCCUS MUTANS UA159 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.60 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 30118 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1604 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.06 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2229 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2170 REMARK 3 BIN FREE R VALUE SET COUNT : 119 REMARK 3 BIN FREE R VALUE : 0.3010 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2464 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 146 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.12 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.37000 REMARK 3 B22 (A**2) : -0.37000 REMARK 3 B33 (A**2) : 0.74000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.153 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.144 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.096 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.696 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.931 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2520 ; 0.020 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3407 ; 1.633 ; 1.936 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 302 ; 5.709 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 131 ;27.219 ;24.198 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 423 ;16.070 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;22.211 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 373 ; 0.264 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1934 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1093 ; 0.214 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1714 ; 0.304 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 154 ; 0.154 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 42 ; 0.213 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 16 ; 0.179 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1598 ; 1.157 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2463 ; 1.746 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1057 ; 2.669 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 944 ; 3.834 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 15 A 69 REMARK 3 ORIGIN FOR THE GROUP (A): 30.0450 14.8640 3.0000 REMARK 3 T TENSOR REMARK 3 T11: -0.1944 T22: 0.1184 REMARK 3 T33: 0.0745 T12: -0.0190 REMARK 3 T13: 0.0189 T23: 0.0476 REMARK 3 L TENSOR REMARK 3 L11: 2.2989 L22: 3.0186 REMARK 3 L33: 3.4600 L12: 1.2280 REMARK 3 L13: -0.3856 L23: -1.5846 REMARK 3 S TENSOR REMARK 3 S11: -0.0295 S12: 0.0847 S13: -0.0343 REMARK 3 S21: 0.1930 S22: -0.0528 S23: -0.3378 REMARK 3 S31: -0.0789 S32: 0.6782 S33: 0.0822 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 71 A 175 REMARK 3 ORIGIN FOR THE GROUP (A): 17.9450 10.3920 -1.0310 REMARK 3 T TENSOR REMARK 3 T11: -0.1633 T22: -0.0679 REMARK 3 T33: -0.0054 T12: -0.0007 REMARK 3 T13: 0.0111 T23: 0.0195 REMARK 3 L TENSOR REMARK 3 L11: 1.9436 L22: 1.5738 REMARK 3 L33: 2.4392 L12: 0.6085 REMARK 3 L13: 0.2798 L23: -0.3856 REMARK 3 S TENSOR REMARK 3 S11: -0.1069 S12: 0.3175 S13: -0.0267 REMARK 3 S21: -0.1724 S22: -0.0308 S23: -0.0632 REMARK 3 S31: 0.0621 S32: 0.3072 S33: 0.1376 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 15 B 60 REMARK 3 ORIGIN FOR THE GROUP (A): 14.9900 30.0970 16.6050 REMARK 3 T TENSOR REMARK 3 T11: 0.0484 T22: -0.2451 REMARK 3 T33: 0.0132 T12: -0.0103 REMARK 3 T13: -0.0467 T23: -0.0275 REMARK 3 L TENSOR REMARK 3 L11: 2.3516 L22: 2.5492 REMARK 3 L33: 3.3296 L12: 0.4141 REMARK 3 L13: 0.7989 L23: -0.2836 REMARK 3 S TENSOR REMARK 3 S11: 0.0079 S12: -0.0031 S13: 0.2846 REMARK 3 S21: 0.1939 S22: -0.0691 S23: -0.0008 REMARK 3 S31: -0.5806 S32: 0.0059 S33: 0.0612 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 71 B 177 REMARK 3 ORIGIN FOR THE GROUP (A): 10.7400 17.6120 21.0520 REMARK 3 T TENSOR REMARK 3 T11: -0.0472 T22: -0.1556 REMARK 3 T33: 0.0022 T12: -0.0045 REMARK 3 T13: -0.0189 T23: -0.0066 REMARK 3 L TENSOR REMARK 3 L11: 1.8927 L22: 2.0480 REMARK 3 L33: 2.7423 L12: 0.6811 REMARK 3 L13: 0.3653 L23: -0.2786 REMARK 3 S TENSOR REMARK 3 S11: -0.0186 S12: -0.2000 S13: 0.0951 REMARK 3 S21: 0.3315 S22: -0.1209 S23: 0.0361 REMARK 3 S31: -0.3684 S32: -0.0482 S33: 0.1395 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3L8U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-JAN-10. REMARK 100 THE DEPOSITION ID IS D_1000056978. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-FEB-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-6A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31772 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3E5Y REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.83 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5M (NH4)2SO4, 0.1M BIS-TRIS PH7.0, REMARK 280 0.7% BETA-OG , VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 35.49600 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 53.24400 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 17.74800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 ILE A 3 REMARK 465 GLU A 4 REMARK 465 GLN A 5 REMARK 465 LEU A 6 REMARK 465 GLU A 7 REMARK 465 LYS A 8 REMARK 465 GLU A 9 REMARK 465 ASN A 10 REMARK 465 LYS A 11 REMARK 465 LEU A 12 REMARK 465 LEU A 13 REMARK 465 THR A 14 REMARK 465 LYS A 61 REMARK 465 ARG A 62 REMARK 465 ALA A 63 REMARK 465 GLY A 64 REMARK 465 LEU A 65 REMARK 465 ASP A 66 REMARK 465 LYS A 70 REMARK 465 TYR A 176 REMARK 465 ALA A 177 REMARK 465 VAL A 178 REMARK 465 ASP A 179 REMARK 465 LYS A 180 REMARK 465 LEU A 181 REMARK 465 LYS A 182 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 ILE B 3 REMARK 465 GLU B 4 REMARK 465 GLN B 5 REMARK 465 LEU B 6 REMARK 465 GLU B 7 REMARK 465 LYS B 8 REMARK 465 GLU B 9 REMARK 465 ASN B 10 REMARK 465 LYS B 11 REMARK 465 LEU B 12 REMARK 465 LEU B 13 REMARK 465 THR B 14 REMARK 465 LYS B 61 REMARK 465 ARG B 62 REMARK 465 ALA B 63 REMARK 465 GLY B 64 REMARK 465 LEU B 65 REMARK 465 ASP B 66 REMARK 465 TYR B 67 REMARK 465 TRP B 68 REMARK 465 ASP B 69 REMARK 465 LYS B 70 REMARK 465 VAL B 178 REMARK 465 ASP B 179 REMARK 465 LYS B 180 REMARK 465 LEU B 181 REMARK 465 LYS B 182 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR A 67 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU A 125 CG CD OE1 OE2 REMARK 470 GLU A 126 CG CD OE1 OE2 REMARK 470 ARG A 129 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 130 CG CD OE1 NE2 REMARK 470 GLU B 126 CG CD OE1 OE2 REMARK 470 ARG B 129 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 189 O HOH A 233 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS B 86 CB CYS B 86 SG 0.109 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 49 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 CYS A 86 CA - CB - SG ANGL. DEV. = 6.7 DEGREES REMARK 500 CYS B 86 CA - CB - SG ANGL. DEV. = 7.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 98 40.76 -83.73 REMARK 500 ASN B 98 39.97 -88.02 REMARK 500 REMARK 500 REMARK: NULL DBREF 3L8U A 1 182 UNP Q8DSR4 Q8DSR4_STRMU 1 182 DBREF 3L8U B 1 182 UNP Q8DSR4 Q8DSR4_STRMU 1 182 SEQADV 3L8U VAL A 140 UNP Q8DSR4 MET 140 ENGINEERED MUTATION SEQADV 3L8U VAL B 140 UNP Q8DSR4 MET 140 ENGINEERED MUTATION SEQRES 1 A 182 MET ASN ILE GLU GLN LEU GLU LYS GLU ASN LYS LEU LEU SEQRES 2 A 182 THR LEU GLY ARG ASN HIS VAL VAL LEU PHE GLN PRO GLN SEQRES 3 A 182 ILE PRO ALA ASN THR GLY ASN ILE ALA ARG THR CYS ALA SEQRES 4 A 182 ALA THR ASN THR SER LEU HIS ILE ILE ARG PRO MET GLY SEQRES 5 A 182 PHE PRO ILE ASP ASP LYS LYS MET LYS ARG ALA GLY LEU SEQRES 6 A 182 ASP TYR TRP ASP LYS LEU ASP VAL HIS PHE TYR ASP SER SEQRES 7 A 182 LEU ASN ASP PHE MET ASN ILE CYS SER GLY LYS LEU HIS SEQRES 8 A 182 LEU ILE THR LYS PHE ALA ASN LYS THR TYR SER ASP GLU SEQRES 9 A 182 ASN TYR ASP ASP SER GLU HIS HIS TYR PHE LEU PHE GLY SEQRES 10 A 182 ARG GLU ASP LYS GLY LEU PRO GLU GLU PHE MET ARG GLN SEQRES 11 A 182 HIS SER GLU LYS ALA LEU ARG ILE PRO VAL ASN ASP GLN SEQRES 12 A 182 HIS VAL ARG SER LEU ASN LEU SER ASN THR VAL CYS MET SEQRES 13 A 182 ILE VAL TYR GLU ALA LEU ARG GLN GLN ASP PHE ILE GLY SEQRES 14 A 182 LEU GLU LEU SER HIS THR TYR ALA VAL ASP LYS LEU LYS SEQRES 1 B 182 MET ASN ILE GLU GLN LEU GLU LYS GLU ASN LYS LEU LEU SEQRES 2 B 182 THR LEU GLY ARG ASN HIS VAL VAL LEU PHE GLN PRO GLN SEQRES 3 B 182 ILE PRO ALA ASN THR GLY ASN ILE ALA ARG THR CYS ALA SEQRES 4 B 182 ALA THR ASN THR SER LEU HIS ILE ILE ARG PRO MET GLY SEQRES 5 B 182 PHE PRO ILE ASP ASP LYS LYS MET LYS ARG ALA GLY LEU SEQRES 6 B 182 ASP TYR TRP ASP LYS LEU ASP VAL HIS PHE TYR ASP SER SEQRES 7 B 182 LEU ASN ASP PHE MET ASN ILE CYS SER GLY LYS LEU HIS SEQRES 8 B 182 LEU ILE THR LYS PHE ALA ASN LYS THR TYR SER ASP GLU SEQRES 9 B 182 ASN TYR ASP ASP SER GLU HIS HIS TYR PHE LEU PHE GLY SEQRES 10 B 182 ARG GLU ASP LYS GLY LEU PRO GLU GLU PHE MET ARG GLN SEQRES 11 B 182 HIS SER GLU LYS ALA LEU ARG ILE PRO VAL ASN ASP GLN SEQRES 12 B 182 HIS VAL ARG SER LEU ASN LEU SER ASN THR VAL CYS MET SEQRES 13 B 182 ILE VAL TYR GLU ALA LEU ARG GLN GLN ASP PHE ILE GLY SEQRES 14 B 182 LEU GLU LEU SER HIS THR TYR ALA VAL ASP LYS LEU LYS FORMUL 3 HOH *146(H2 O) HELIX 1 1 ILE A 27 ASN A 42 1 16 HELIX 2 2 SER A 78 CYS A 86 1 9 HELIX 3 3 THR A 100 GLU A 104 5 5 HELIX 4 4 PRO A 124 HIS A 131 1 8 HELIX 5 5 ASN A 149 GLN A 165 1 17 HELIX 6 6 PHE A 167 LEU A 172 5 6 HELIX 7 7 ILE B 27 ASN B 42 1 16 HELIX 8 8 SER B 78 CYS B 86 1 9 HELIX 9 9 THR B 100 GLU B 104 5 5 HELIX 10 10 PRO B 124 HIS B 131 1 8 HELIX 11 11 ASN B 149 GLN B 165 1 17 HELIX 12 12 PHE B 167 GLU B 171 5 5 HELIX 13 13 LEU B 172 ALA B 177 1 6 SHEET 1 A 6 VAL A 73 TYR A 76 0 SHEET 2 A 6 SER A 44 ILE A 48 1 N ILE A 47 O HIS A 74 SHEET 3 A 6 ASN A 18 PHE A 23 1 N VAL A 20 O SER A 44 SHEET 4 A 6 HIS A 112 PHE A 116 1 O PHE A 114 N VAL A 21 SHEET 5 A 6 LYS A 89 ILE A 93 1 N HIS A 91 O TYR A 113 SHEET 6 A 6 ALA A 135 LEU A 136 1 O LEU A 136 N LEU A 92 SHEET 1 B 6 VAL B 73 TYR B 76 0 SHEET 2 B 6 SER B 44 ILE B 48 1 N ILE B 47 O HIS B 74 SHEET 3 B 6 ASN B 18 PHE B 23 1 N LEU B 22 O HIS B 46 SHEET 4 B 6 HIS B 112 PHE B 116 1 O PHE B 114 N VAL B 21 SHEET 5 B 6 LYS B 89 ILE B 93 1 N HIS B 91 O TYR B 113 SHEET 6 B 6 ALA B 135 LEU B 136 1 O LEU B 136 N LEU B 92 CISPEP 1 ARG A 49 PRO A 50 0 -4.48 CISPEP 2 ARG B 49 PRO B 50 0 -6.48 CRYST1 82.277 82.277 70.992 90.00 90.00 90.00 P 43 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012154 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012154 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014086 0.00000