data_3L93 # _entry.id 3L93 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3L93 pdb_00003l93 10.2210/pdb3l93/pdb RCSB RCSB056987 ? ? WWPDB D_1000056987 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3L92 'Phosphopantetheine adenylyltransferase from Yersinia pestis complexed with coenzyme A.' unspecified TargetDB IDP90549 . unspecified # _pdbx_database_status.entry_id 3L93 _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-01-04 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Osipiuk, J.' 1 'Maltseva, N.' 2 'Makowska-grzyska, M.' 3 'Kwon, K.' 4 'Anderson, W.F.' 5 'Joachimiak, A.' 6 'Center for Structural Genomics of Infectious Diseases (CSGID)' 7 # _citation.id primary _citation.title 'X-ray crystal structure of phosphopantetheine adenylyltransferase from Yersinia pestis.' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Osipiuk, J.' 1 ? primary 'Maltseva, N.' 2 ? primary 'Makowska-grzyska, M.' 3 ? primary 'Kwon, K.' 4 ? primary 'Anderson, W.F.' 5 ? primary 'Joachimiak, A.' 6 ? # _cell.length_a 115.511 _cell.length_b 115.511 _cell.length_c 117.090 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 3L93 _cell.pdbx_unique_axis ? _cell.Z_PDB 18 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'H 3 2' _symmetry.entry_id 3L93 _symmetry.Int_Tables_number 155 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Phosphopantetheine adenylyltransferase' 17948.002 1 2.7.7.3 ? ? ? 2 non-polymer syn 'FORMIC ACID' 46.025 1 ? ? ? ? 3 water nat water 18.015 79 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Pantetheine-phosphate adenylyltransferase, PPAT, Dephospho-CoA pyrophosphorylase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SNAMITKAIYPGTFDPITNGHLDLVTRASAMFSHVILAIADSSSKKPMFTLDERVALAKKVTAPLKNVEVLGFSELMAEF AKKHNANILVRGLRSVSDFEYEWQLANMNRHLMPKLESVFLIPSEKWSFISSSLVKEVARHGGDITPFLPKPVTKALLAK LA ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAMITKAIYPGTFDPITNGHLDLVTRASAMFSHVILAIADSSSKKPMFTLDERVALAKKVTAPLKNVEVLGFSELMAEF AKKHNANILVRGLRSVSDFEYEWQLANMNRHLMPKLESVFLIPSEKWSFISSSLVKEVARHGGDITPFLPKPVTKALLAK LA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier IDP90549 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 MET n 1 5 ILE n 1 6 THR n 1 7 LYS n 1 8 ALA n 1 9 ILE n 1 10 TYR n 1 11 PRO n 1 12 GLY n 1 13 THR n 1 14 PHE n 1 15 ASP n 1 16 PRO n 1 17 ILE n 1 18 THR n 1 19 ASN n 1 20 GLY n 1 21 HIS n 1 22 LEU n 1 23 ASP n 1 24 LEU n 1 25 VAL n 1 26 THR n 1 27 ARG n 1 28 ALA n 1 29 SER n 1 30 ALA n 1 31 MET n 1 32 PHE n 1 33 SER n 1 34 HIS n 1 35 VAL n 1 36 ILE n 1 37 LEU n 1 38 ALA n 1 39 ILE n 1 40 ALA n 1 41 ASP n 1 42 SER n 1 43 SER n 1 44 SER n 1 45 LYS n 1 46 LYS n 1 47 PRO n 1 48 MET n 1 49 PHE n 1 50 THR n 1 51 LEU n 1 52 ASP n 1 53 GLU n 1 54 ARG n 1 55 VAL n 1 56 ALA n 1 57 LEU n 1 58 ALA n 1 59 LYS n 1 60 LYS n 1 61 VAL n 1 62 THR n 1 63 ALA n 1 64 PRO n 1 65 LEU n 1 66 LYS n 1 67 ASN n 1 68 VAL n 1 69 GLU n 1 70 VAL n 1 71 LEU n 1 72 GLY n 1 73 PHE n 1 74 SER n 1 75 GLU n 1 76 LEU n 1 77 MET n 1 78 ALA n 1 79 GLU n 1 80 PHE n 1 81 ALA n 1 82 LYS n 1 83 LYS n 1 84 HIS n 1 85 ASN n 1 86 ALA n 1 87 ASN n 1 88 ILE n 1 89 LEU n 1 90 VAL n 1 91 ARG n 1 92 GLY n 1 93 LEU n 1 94 ARG n 1 95 SER n 1 96 VAL n 1 97 SER n 1 98 ASP n 1 99 PHE n 1 100 GLU n 1 101 TYR n 1 102 GLU n 1 103 TRP n 1 104 GLN n 1 105 LEU n 1 106 ALA n 1 107 ASN n 1 108 MET n 1 109 ASN n 1 110 ARG n 1 111 HIS n 1 112 LEU n 1 113 MET n 1 114 PRO n 1 115 LYS n 1 116 LEU n 1 117 GLU n 1 118 SER n 1 119 VAL n 1 120 PHE n 1 121 LEU n 1 122 ILE n 1 123 PRO n 1 124 SER n 1 125 GLU n 1 126 LYS n 1 127 TRP n 1 128 SER n 1 129 PHE n 1 130 ILE n 1 131 SER n 1 132 SER n 1 133 SER n 1 134 LEU n 1 135 VAL n 1 136 LYS n 1 137 GLU n 1 138 VAL n 1 139 ALA n 1 140 ARG n 1 141 HIS n 1 142 GLY n 1 143 GLY n 1 144 ASP n 1 145 ILE n 1 146 THR n 1 147 PRO n 1 148 PHE n 1 149 LEU n 1 150 PRO n 1 151 LYS n 1 152 PRO n 1 153 VAL n 1 154 THR n 1 155 LYS n 1 156 ALA n 1 157 LEU n 1 158 LEU n 1 159 ALA n 1 160 LYS n 1 161 LEU n 1 162 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'coaD, kdtB, y0088, YPO0053, YP_0054' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain CO92 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Yersinia pestis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 214092 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG7 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code COAD_YERPE _struct_ref.pdbx_db_accession Q8ZJN9 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MITKAIYPGTFDPITNGHLDLVTRASAMFSHVILAIADSSSKKPMFTLDERVALAKKVTAPLKNVEVLGFSELMAEFAKK HNANILVRGLRSVSDFEYEWQLANMNRHLMPKLESVFLIPSEKWSFISSSLVKEVARHGGDITPFLPKPVTKALLAKLA ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3L93 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 162 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8ZJN9 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 159 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 159 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3L93 SER A 1 ? UNP Q8ZJN9 ? ? 'expression tag' -2 1 1 3L93 ASN A 2 ? UNP Q8ZJN9 ? ? 'expression tag' -1 2 1 3L93 ALA A 3 ? UNP Q8ZJN9 ? ? 'expression tag' 0 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 FMT non-polymer . 'FORMIC ACID' ? 'C H2 O2' 46.025 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3L93 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 4.19 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 70.63 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.temp 289 _exptl_crystal_grow.pdbx_details '60% Tacsimate, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 289K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210r' _diffrn_detector.pdbx_collection_date 2009-12-19 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'double crystal monochromator' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-BM' _diffrn_source.pdbx_wavelength_list 0.9792 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-BM # _reflns.entry_id 3L93 _reflns.d_resolution_high 2.160 _reflns.d_resolution_low 32.3 _reflns.number_obs 16233 _reflns.pdbx_Rmerge_I_obs 0.065 _reflns.pdbx_netI_over_sigmaI 15.700 _reflns.pdbx_chi_squared 1.875 _reflns.pdbx_redundancy 10.100 _reflns.percent_possible_obs 100.000 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.number_all 16233 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate 52.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.17 _reflns_shell.d_res_low 2.21 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.764 _reflns_shell.meanI_over_sigI_obs 2.88 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 1.484 _reflns_shell.pdbx_redundancy 6.90 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 807 _reflns_shell.percent_possible_all 100.00 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3L93 _refine.ls_d_res_high 2.160 _refine.ls_d_res_low 32.3 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.580 _refine.ls_number_reflns_obs 16216 _refine.ls_number_reflns_all 16216 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : RESIDUAL ONLY' _refine.ls_R_factor_all 0.177 _refine.ls_R_factor_obs 0.177 _refine.ls_R_factor_R_work 0.175 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.210 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 812 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 34.293 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -1.230 _refine.aniso_B[2][2] -1.230 _refine.aniso_B[3][3] 1.850 _refine.aniso_B[1][2] -0.620 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.970 _refine.correlation_coeff_Fo_to_Fc_free 0.953 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.146 _refine.pdbx_overall_ESU_R_Free 0.139 _refine.overall_SU_ML 0.106 _refine.overall_SU_B 9.388 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 3L92 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 67.86 _refine.B_iso_min 19.98 _refine.occupancy_max 1.00 _refine.occupancy_min 0.40 _refine.pdbx_ls_sigma_I 0 _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1256 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 79 _refine_hist.number_atoms_total 1338 _refine_hist.d_res_high 2.160 _refine_hist.d_res_low 32.3 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1365 0.019 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1865 1.667 1.979 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 186 5.427 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 53 34.961 23.962 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 258 18.315 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 7 22.781 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 218 0.109 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1008 0.008 0.021 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 849 1.020 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1388 1.857 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 516 2.847 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 464 4.537 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.161 _refine_ls_shell.d_res_low 2.217 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 96.510 _refine_ls_shell.number_reflns_R_work 1100 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.252 _refine_ls_shell.R_factor_R_free 0.337 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 61 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1161 _refine_ls_shell.number_reflns_obs 1161 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3L93 _struct.title 'Phosphopantetheine adenylyltransferase from Yersinia pestis.' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3L93 _struct_keywords.text ;structural genomics, phosphopantetheine adenylyltransferase, ATP-binding, Coenzyme A biosynthesis, Nucleotide-binding, Nucleotidyltransferase, Transferase, Center for Structural Genomics of Infectious Diseases, CSGID ; _struct_keywords.pdbx_keywords TRANSFERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 18 ? PHE A 32 ? THR A 15 PHE A 29 1 ? 15 HELX_P HELX_P2 2 SER A 42 ? LYS A 46 ? SER A 39 LYS A 43 5 ? 5 HELX_P HELX_P3 3 THR A 50 ? ALA A 63 ? THR A 47 ALA A 60 1 ? 14 HELX_P HELX_P4 4 LEU A 76 ? HIS A 84 ? LEU A 73 HIS A 81 1 ? 9 HELX_P HELX_P5 5 SER A 95 ? MET A 113 ? SER A 92 MET A 110 1 ? 19 HELX_P HELX_P6 6 SER A 131 ? HIS A 141 ? SER A 128 HIS A 138 1 ? 11 HELX_P HELX_P7 7 PRO A 150 ? ALA A 162 ? PRO A 147 ALA A 159 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASP _struct_mon_prot_cis.label_seq_id 15 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASP _struct_mon_prot_cis.auth_seq_id 12 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 16 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 13 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -2.81 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 68 ? PHE A 73 ? VAL A 65 PHE A 70 A 2 HIS A 34 ? ALA A 40 ? HIS A 31 ALA A 37 A 3 LYS A 7 ? GLY A 12 ? LYS A 4 GLY A 9 A 4 ILE A 88 ? GLY A 92 ? ILE A 85 GLY A 89 A 5 GLU A 117 ? LEU A 121 ? GLU A 114 LEU A 118 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLU A 69 ? O GLU A 66 N LEU A 37 ? N LEU A 34 A 2 3 O ILE A 36 ? O ILE A 33 N TYR A 10 ? N TYR A 7 A 3 4 N ILE A 9 ? N ILE A 6 O VAL A 90 ? O VAL A 87 A 4 5 N LEU A 89 ? N LEU A 86 O GLU A 117 ? O GLU A 114 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id FMT _struct_site.pdbx_auth_seq_id 301 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 3 _struct_site.details 'BINDING SITE FOR RESIDUE FMT A 301' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 MET A 77 ? MET A 74 . ? 1_555 ? 2 AC1 3 HOH C . ? HOH A 208 . ? 1_555 ? 3 AC1 3 HOH C . ? HOH A 238 . ? 1_555 ? # _atom_sites.entry_id 3L93 _atom_sites.fract_transf_matrix[1][1] 0.008657 _atom_sites.fract_transf_matrix[1][2] 0.004998 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009996 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008540 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -2 ? ? ? A . n A 1 2 ASN 2 -1 -1 ASN ASN A . n A 1 3 ALA 3 0 0 ALA ALA A . n A 1 4 MET 4 1 1 MET MET A . n A 1 5 ILE 5 2 2 ILE ILE A . n A 1 6 THR 6 3 3 THR THR A . n A 1 7 LYS 7 4 4 LYS LYS A . n A 1 8 ALA 8 5 5 ALA ALA A . n A 1 9 ILE 9 6 6 ILE ILE A . n A 1 10 TYR 10 7 7 TYR TYR A . n A 1 11 PRO 11 8 8 PRO PRO A . n A 1 12 GLY 12 9 9 GLY GLY A . n A 1 13 THR 13 10 10 THR THR A . n A 1 14 PHE 14 11 11 PHE PHE A . n A 1 15 ASP 15 12 12 ASP ASP A . n A 1 16 PRO 16 13 13 PRO PRO A . n A 1 17 ILE 17 14 14 ILE ILE A . n A 1 18 THR 18 15 15 THR THR A . n A 1 19 ASN 19 16 16 ASN ASN A . n A 1 20 GLY 20 17 17 GLY GLY A . n A 1 21 HIS 21 18 18 HIS HIS A . n A 1 22 LEU 22 19 19 LEU LEU A . n A 1 23 ASP 23 20 20 ASP ASP A . n A 1 24 LEU 24 21 21 LEU LEU A . n A 1 25 VAL 25 22 22 VAL VAL A . n A 1 26 THR 26 23 23 THR THR A . n A 1 27 ARG 27 24 24 ARG ARG A . n A 1 28 ALA 28 25 25 ALA ALA A . n A 1 29 SER 29 26 26 SER SER A . n A 1 30 ALA 30 27 27 ALA ALA A . n A 1 31 MET 31 28 28 MET MET A . n A 1 32 PHE 32 29 29 PHE PHE A . n A 1 33 SER 33 30 30 SER SER A . n A 1 34 HIS 34 31 31 HIS HIS A . n A 1 35 VAL 35 32 32 VAL VAL A . n A 1 36 ILE 36 33 33 ILE ILE A . n A 1 37 LEU 37 34 34 LEU LEU A . n A 1 38 ALA 38 35 35 ALA ALA A . n A 1 39 ILE 39 36 36 ILE ILE A . n A 1 40 ALA 40 37 37 ALA ALA A . n A 1 41 ASP 41 38 38 ASP ASP A . n A 1 42 SER 42 39 39 SER SER A . n A 1 43 SER 43 40 40 SER SER A . n A 1 44 SER 44 41 41 SER SER A . n A 1 45 LYS 45 42 42 LYS LYS A . n A 1 46 LYS 46 43 43 LYS LYS A . n A 1 47 PRO 47 44 44 PRO PRO A . n A 1 48 MET 48 45 45 MET MET A . n A 1 49 PHE 49 46 46 PHE PHE A . n A 1 50 THR 50 47 47 THR THR A . n A 1 51 LEU 51 48 48 LEU LEU A . n A 1 52 ASP 52 49 49 ASP ASP A . n A 1 53 GLU 53 50 50 GLU GLU A . n A 1 54 ARG 54 51 51 ARG ARG A . n A 1 55 VAL 55 52 52 VAL VAL A . n A 1 56 ALA 56 53 53 ALA ALA A . n A 1 57 LEU 57 54 54 LEU LEU A . n A 1 58 ALA 58 55 55 ALA ALA A . n A 1 59 LYS 59 56 56 LYS LYS A . n A 1 60 LYS 60 57 57 LYS LYS A . n A 1 61 VAL 61 58 58 VAL VAL A . n A 1 62 THR 62 59 59 THR THR A . n A 1 63 ALA 63 60 60 ALA ALA A . n A 1 64 PRO 64 61 61 PRO PRO A . n A 1 65 LEU 65 62 62 LEU LEU A . n A 1 66 LYS 66 63 63 LYS LYS A . n A 1 67 ASN 67 64 64 ASN ASN A . n A 1 68 VAL 68 65 65 VAL VAL A . n A 1 69 GLU 69 66 66 GLU GLU A . n A 1 70 VAL 70 67 67 VAL VAL A . n A 1 71 LEU 71 68 68 LEU LEU A . n A 1 72 GLY 72 69 69 GLY GLY A . n A 1 73 PHE 73 70 70 PHE PHE A . n A 1 74 SER 74 71 71 SER SER A . n A 1 75 GLU 75 72 72 GLU GLU A . n A 1 76 LEU 76 73 73 LEU LEU A . n A 1 77 MET 77 74 74 MET MET A . n A 1 78 ALA 78 75 75 ALA ALA A . n A 1 79 GLU 79 76 76 GLU GLU A . n A 1 80 PHE 80 77 77 PHE PHE A . n A 1 81 ALA 81 78 78 ALA ALA A . n A 1 82 LYS 82 79 79 LYS LYS A . n A 1 83 LYS 83 80 80 LYS LYS A . n A 1 84 HIS 84 81 81 HIS HIS A . n A 1 85 ASN 85 82 82 ASN ASN A . n A 1 86 ALA 86 83 83 ALA ALA A . n A 1 87 ASN 87 84 84 ASN ASN A . n A 1 88 ILE 88 85 85 ILE ILE A . n A 1 89 LEU 89 86 86 LEU LEU A . n A 1 90 VAL 90 87 87 VAL VAL A . n A 1 91 ARG 91 88 88 ARG ARG A . n A 1 92 GLY 92 89 89 GLY GLY A . n A 1 93 LEU 93 90 90 LEU LEU A . n A 1 94 ARG 94 91 91 ARG ARG A . n A 1 95 SER 95 92 92 SER SER A . n A 1 96 VAL 96 93 93 VAL VAL A . n A 1 97 SER 97 94 94 SER SER A . n A 1 98 ASP 98 95 95 ASP ASP A . n A 1 99 PHE 99 96 96 PHE PHE A . n A 1 100 GLU 100 97 97 GLU GLU A . n A 1 101 TYR 101 98 98 TYR TYR A . n A 1 102 GLU 102 99 99 GLU GLU A . n A 1 103 TRP 103 100 100 TRP TRP A . n A 1 104 GLN 104 101 101 GLN GLN A . n A 1 105 LEU 105 102 102 LEU LEU A . n A 1 106 ALA 106 103 103 ALA ALA A . n A 1 107 ASN 107 104 104 ASN ASN A . n A 1 108 MET 108 105 105 MET MET A . n A 1 109 ASN 109 106 106 ASN ASN A . n A 1 110 ARG 110 107 107 ARG ARG A . n A 1 111 HIS 111 108 108 HIS HIS A . n A 1 112 LEU 112 109 109 LEU LEU A . n A 1 113 MET 113 110 110 MET MET A . n A 1 114 PRO 114 111 111 PRO PRO A . n A 1 115 LYS 115 112 112 LYS LYS A . n A 1 116 LEU 116 113 113 LEU LEU A . n A 1 117 GLU 117 114 114 GLU GLU A . n A 1 118 SER 118 115 115 SER SER A . n A 1 119 VAL 119 116 116 VAL VAL A . n A 1 120 PHE 120 117 117 PHE PHE A . n A 1 121 LEU 121 118 118 LEU LEU A . n A 1 122 ILE 122 119 119 ILE ILE A . n A 1 123 PRO 123 120 120 PRO PRO A . n A 1 124 SER 124 121 121 SER SER A . n A 1 125 GLU 125 122 122 GLU GLU A . n A 1 126 LYS 126 123 123 LYS LYS A . n A 1 127 TRP 127 124 124 TRP TRP A . n A 1 128 SER 128 125 125 SER SER A . n A 1 129 PHE 129 126 126 PHE PHE A . n A 1 130 ILE 130 127 127 ILE ILE A . n A 1 131 SER 131 128 128 SER SER A . n A 1 132 SER 132 129 129 SER SER A . n A 1 133 SER 133 130 130 SER SER A . n A 1 134 LEU 134 131 131 LEU LEU A . n A 1 135 VAL 135 132 132 VAL VAL A . n A 1 136 LYS 136 133 133 LYS LYS A . n A 1 137 GLU 137 134 134 GLU GLU A . n A 1 138 VAL 138 135 135 VAL VAL A . n A 1 139 ALA 139 136 136 ALA ALA A . n A 1 140 ARG 140 137 137 ARG ARG A . n A 1 141 HIS 141 138 138 HIS HIS A . n A 1 142 GLY 142 139 139 GLY GLY A . n A 1 143 GLY 143 140 140 GLY GLY A . n A 1 144 ASP 144 141 141 ASP ASP A . n A 1 145 ILE 145 142 142 ILE ILE A . n A 1 146 THR 146 143 143 THR THR A . n A 1 147 PRO 147 144 144 PRO PRO A . n A 1 148 PHE 148 145 145 PHE PHE A . n A 1 149 LEU 149 146 146 LEU LEU A . n A 1 150 PRO 150 147 147 PRO PRO A . n A 1 151 LYS 151 148 148 LYS LYS A . n A 1 152 PRO 152 149 149 PRO PRO A . n A 1 153 VAL 153 150 150 VAL VAL A . n A 1 154 THR 154 151 151 THR THR A . n A 1 155 LYS 155 152 152 LYS LYS A . n A 1 156 ALA 156 153 153 ALA ALA A . n A 1 157 LEU 157 154 154 LEU LEU A . n A 1 158 LEU 158 155 155 LEU LEU A . n A 1 159 ALA 159 156 156 ALA ALA A . n A 1 160 LYS 160 157 157 LYS LYS A . n A 1 161 LEU 161 158 158 LEU LEU A . n A 1 162 ALA 162 159 159 ALA ALA A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Center for Structural Genomics of Infectious Diseases' _pdbx_SG_project.initial_of_center CSGID # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMT 1 301 301 FMT FMT A . C 3 HOH 1 160 1 HOH HOH A . C 3 HOH 2 161 2 HOH HOH A . C 3 HOH 3 162 3 HOH HOH A . C 3 HOH 4 163 4 HOH HOH A . C 3 HOH 5 164 5 HOH HOH A . C 3 HOH 6 165 6 HOH HOH A . C 3 HOH 7 166 7 HOH HOH A . C 3 HOH 8 167 8 HOH HOH A . C 3 HOH 9 168 9 HOH HOH A . C 3 HOH 10 169 10 HOH HOH A . C 3 HOH 11 170 11 HOH HOH A . C 3 HOH 12 171 12 HOH HOH A . C 3 HOH 13 172 13 HOH HOH A . C 3 HOH 14 173 14 HOH HOH A . C 3 HOH 15 174 15 HOH HOH A . C 3 HOH 16 175 16 HOH HOH A . C 3 HOH 17 176 17 HOH HOH A . C 3 HOH 18 177 18 HOH HOH A . C 3 HOH 19 178 19 HOH HOH A . C 3 HOH 20 179 20 HOH HOH A . C 3 HOH 21 180 21 HOH HOH A . C 3 HOH 22 181 22 HOH HOH A . C 3 HOH 23 182 23 HOH HOH A . C 3 HOH 24 183 24 HOH HOH A . C 3 HOH 25 184 25 HOH HOH A . C 3 HOH 26 185 26 HOH HOH A . C 3 HOH 27 186 27 HOH HOH A . C 3 HOH 28 187 28 HOH HOH A . C 3 HOH 29 188 29 HOH HOH A . C 3 HOH 30 189 30 HOH HOH A . C 3 HOH 31 190 31 HOH HOH A . C 3 HOH 32 191 32 HOH HOH A . C 3 HOH 33 192 33 HOH HOH A . C 3 HOH 34 193 34 HOH HOH A . C 3 HOH 35 194 35 HOH HOH A . C 3 HOH 36 195 36 HOH HOH A . C 3 HOH 37 196 37 HOH HOH A . C 3 HOH 38 197 38 HOH HOH A . C 3 HOH 39 198 39 HOH HOH A . C 3 HOH 40 199 40 HOH HOH A . C 3 HOH 41 200 41 HOH HOH A . C 3 HOH 42 201 42 HOH HOH A . C 3 HOH 43 202 43 HOH HOH A . C 3 HOH 44 203 44 HOH HOH A . C 3 HOH 45 204 45 HOH HOH A . C 3 HOH 46 205 46 HOH HOH A . C 3 HOH 47 206 47 HOH HOH A . C 3 HOH 48 207 48 HOH HOH A . C 3 HOH 49 208 49 HOH HOH A . C 3 HOH 50 209 50 HOH HOH A . C 3 HOH 51 210 51 HOH HOH A . C 3 HOH 52 211 52 HOH HOH A . C 3 HOH 53 212 53 HOH HOH A . C 3 HOH 54 213 54 HOH HOH A . C 3 HOH 55 214 55 HOH HOH A . C 3 HOH 56 215 56 HOH HOH A . C 3 HOH 57 216 57 HOH HOH A . C 3 HOH 58 217 58 HOH HOH A . C 3 HOH 59 218 59 HOH HOH A . C 3 HOH 60 219 60 HOH HOH A . C 3 HOH 61 220 61 HOH HOH A . C 3 HOH 62 221 62 HOH HOH A . C 3 HOH 63 222 63 HOH HOH A . C 3 HOH 64 223 64 HOH HOH A . C 3 HOH 65 224 65 HOH HOH A . C 3 HOH 66 225 66 HOH HOH A . C 3 HOH 67 226 67 HOH HOH A . C 3 HOH 68 227 68 HOH HOH A . C 3 HOH 69 228 69 HOH HOH A . C 3 HOH 70 229 70 HOH HOH A . C 3 HOH 71 230 71 HOH HOH A . C 3 HOH 72 231 72 HOH HOH A . C 3 HOH 73 232 73 HOH HOH A . C 3 HOH 74 233 74 HOH HOH A . C 3 HOH 75 234 75 HOH HOH A . C 3 HOH 76 235 76 HOH HOH A . C 3 HOH 77 236 77 HOH HOH A . C 3 HOH 78 237 78 HOH HOH A . C 3 HOH 79 238 79 HOH HOH A . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 software_defined_assembly PISA hexameric 6 2 software_defined_assembly PISA trimeric 3 3 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2,3,4,5,6 A,B,C 2 1,2,3 A,B,C 3 1,4 A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 17220 ? 1 MORE -150 ? 1 'SSA (A^2)' 37910 ? 2 'ABSA (A^2)' 4320 ? 2 MORE -38 ? 2 'SSA (A^2)' 23250 ? 3 'ABSA (A^2)' 2920 ? 3 MORE -24 ? 3 'SSA (A^2)' 15450 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5000000000 0.8660254038 0.0000000000 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 4_556 y,x,-z+1 -0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 117.0900000000 5 'crystal symmetry operation' 5_556 x-y,-y,-z+1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 117.0900000000 6 'crystal symmetry operation' 6_556 -x,-x+y,-z+1 -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 -0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 117.0900000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-01-19 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2014-10-01 4 'Structure model' 1 3 2017-11-01 5 'Structure model' 1 4 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Refinement description' 3 2 'Structure model' 'Version format compliance' 4 3 'Structure model' 'Structure summary' 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' 9 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_initial_refinement_model 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.contact_author' 3 4 'Structure model' '_software.contact_author_email' 4 4 'Structure model' '_software.date' 5 4 'Structure model' '_software.language' 6 4 'Structure model' '_software.location' 7 4 'Structure model' '_software.name' 8 4 'Structure model' '_software.type' 9 4 'Structure model' '_software.version' 10 5 'Structure model' '_database_2.pdbx_DOI' 11 5 'Structure model' '_database_2.pdbx_database_accession' 12 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 13 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 14 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 4.7938 _pdbx_refine_tls.origin_y 19.0340 _pdbx_refine_tls.origin_z 45.1136 _pdbx_refine_tls.T[1][1] 0.1490 _pdbx_refine_tls.T[2][2] 0.0038 _pdbx_refine_tls.T[3][3] 0.0794 _pdbx_refine_tls.T[1][2] -0.0193 _pdbx_refine_tls.T[1][3] -0.0006 _pdbx_refine_tls.T[2][3] 0.0047 _pdbx_refine_tls.L[1][1] 2.7954 _pdbx_refine_tls.L[2][2] 1.7791 _pdbx_refine_tls.L[3][3] 1.9463 _pdbx_refine_tls.L[1][2] -0.4041 _pdbx_refine_tls.L[1][3] 0.5806 _pdbx_refine_tls.L[2][3] -1.2702 _pdbx_refine_tls.S[1][1] 0.0148 _pdbx_refine_tls.S[2][2] 0.0469 _pdbx_refine_tls.S[3][3] -0.0617 _pdbx_refine_tls.S[1][2] -0.0432 _pdbx_refine_tls.S[1][3] -0.0823 _pdbx_refine_tls.S[2][3] -0.1115 _pdbx_refine_tls.S[2][1] -0.1710 _pdbx_refine_tls.S[3][1] 0.0494 _pdbx_refine_tls.S[3][2] -0.0311 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A -1 A 159 ? . . . . ? 'X-RAY DIFFRACTION' 2 1 A 301 A 301 ? . . . . ? 'X-RAY DIFFRACTION' 3 1 A 160 A 238 ? . . . . ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 REFMAC 5.5.0102 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 SBC-Collect . ? ? ? ? 'data collection' ? ? ? 6 HKL-3000 . ? ? ? ? 'data reduction' ? ? ? 7 MOLREP . ? ? ? ? phasing ? ? ? 8 HKL-3000 . ? ? ? ? phasing ? ? ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A ALA 75 ? ? CE A MET 110 ? A 2.12 2 1 O A HOH 183 ? ? O A HOH 232 ? ? 2.13 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id LYS _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 43 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 37.71 _pdbx_validate_torsion.psi 72.05 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id SER _pdbx_unobs_or_zero_occ_residues.auth_seq_id -2 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id SER _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 FMT C C N N 74 FMT O1 O N N 75 FMT O2 O N N 76 FMT H H N N 77 FMT HO2 H N N 78 GLN N N N N 79 GLN CA C N S 80 GLN C C N N 81 GLN O O N N 82 GLN CB C N N 83 GLN CG C N N 84 GLN CD C N N 85 GLN OE1 O N N 86 GLN NE2 N N N 87 GLN OXT O N N 88 GLN H H N N 89 GLN H2 H N N 90 GLN HA H N N 91 GLN HB2 H N N 92 GLN HB3 H N N 93 GLN HG2 H N N 94 GLN HG3 H N N 95 GLN HE21 H N N 96 GLN HE22 H N N 97 GLN HXT H N N 98 GLU N N N N 99 GLU CA C N S 100 GLU C C N N 101 GLU O O N N 102 GLU CB C N N 103 GLU CG C N N 104 GLU CD C N N 105 GLU OE1 O N N 106 GLU OE2 O N N 107 GLU OXT O N N 108 GLU H H N N 109 GLU H2 H N N 110 GLU HA H N N 111 GLU HB2 H N N 112 GLU HB3 H N N 113 GLU HG2 H N N 114 GLU HG3 H N N 115 GLU HE2 H N N 116 GLU HXT H N N 117 GLY N N N N 118 GLY CA C N N 119 GLY C C N N 120 GLY O O N N 121 GLY OXT O N N 122 GLY H H N N 123 GLY H2 H N N 124 GLY HA2 H N N 125 GLY HA3 H N N 126 GLY HXT H N N 127 HIS N N N N 128 HIS CA C N S 129 HIS C C N N 130 HIS O O N N 131 HIS CB C N N 132 HIS CG C Y N 133 HIS ND1 N Y N 134 HIS CD2 C Y N 135 HIS CE1 C Y N 136 HIS NE2 N Y N 137 HIS OXT O N N 138 HIS H H N N 139 HIS H2 H N N 140 HIS HA H N N 141 HIS HB2 H N N 142 HIS HB3 H N N 143 HIS HD1 H N N 144 HIS HD2 H N N 145 HIS HE1 H N N 146 HIS HE2 H N N 147 HIS HXT H N N 148 HOH O O N N 149 HOH H1 H N N 150 HOH H2 H N N 151 ILE N N N N 152 ILE CA C N S 153 ILE C C N N 154 ILE O O N N 155 ILE CB C N S 156 ILE CG1 C N N 157 ILE CG2 C N N 158 ILE CD1 C N N 159 ILE OXT O N N 160 ILE H H N N 161 ILE H2 H N N 162 ILE HA H N N 163 ILE HB H N N 164 ILE HG12 H N N 165 ILE HG13 H N N 166 ILE HG21 H N N 167 ILE HG22 H N N 168 ILE HG23 H N N 169 ILE HD11 H N N 170 ILE HD12 H N N 171 ILE HD13 H N N 172 ILE HXT H N N 173 LEU N N N N 174 LEU CA C N S 175 LEU C C N N 176 LEU O O N N 177 LEU CB C N N 178 LEU CG C N N 179 LEU CD1 C N N 180 LEU CD2 C N N 181 LEU OXT O N N 182 LEU H H N N 183 LEU H2 H N N 184 LEU HA H N N 185 LEU HB2 H N N 186 LEU HB3 H N N 187 LEU HG H N N 188 LEU HD11 H N N 189 LEU HD12 H N N 190 LEU HD13 H N N 191 LEU HD21 H N N 192 LEU HD22 H N N 193 LEU HD23 H N N 194 LEU HXT H N N 195 LYS N N N N 196 LYS CA C N S 197 LYS C C N N 198 LYS O O N N 199 LYS CB C N N 200 LYS CG C N N 201 LYS CD C N N 202 LYS CE C N N 203 LYS NZ N N N 204 LYS OXT O N N 205 LYS H H N N 206 LYS H2 H N N 207 LYS HA H N N 208 LYS HB2 H N N 209 LYS HB3 H N N 210 LYS HG2 H N N 211 LYS HG3 H N N 212 LYS HD2 H N N 213 LYS HD3 H N N 214 LYS HE2 H N N 215 LYS HE3 H N N 216 LYS HZ1 H N N 217 LYS HZ2 H N N 218 LYS HZ3 H N N 219 LYS HXT H N N 220 MET N N N N 221 MET CA C N S 222 MET C C N N 223 MET O O N N 224 MET CB C N N 225 MET CG C N N 226 MET SD S N N 227 MET CE C N N 228 MET OXT O N N 229 MET H H N N 230 MET H2 H N N 231 MET HA H N N 232 MET HB2 H N N 233 MET HB3 H N N 234 MET HG2 H N N 235 MET HG3 H N N 236 MET HE1 H N N 237 MET HE2 H N N 238 MET HE3 H N N 239 MET HXT H N N 240 PHE N N N N 241 PHE CA C N S 242 PHE C C N N 243 PHE O O N N 244 PHE CB C N N 245 PHE CG C Y N 246 PHE CD1 C Y N 247 PHE CD2 C Y N 248 PHE CE1 C Y N 249 PHE CE2 C Y N 250 PHE CZ C Y N 251 PHE OXT O N N 252 PHE H H N N 253 PHE H2 H N N 254 PHE HA H N N 255 PHE HB2 H N N 256 PHE HB3 H N N 257 PHE HD1 H N N 258 PHE HD2 H N N 259 PHE HE1 H N N 260 PHE HE2 H N N 261 PHE HZ H N N 262 PHE HXT H N N 263 PRO N N N N 264 PRO CA C N S 265 PRO C C N N 266 PRO O O N N 267 PRO CB C N N 268 PRO CG C N N 269 PRO CD C N N 270 PRO OXT O N N 271 PRO H H N N 272 PRO HA H N N 273 PRO HB2 H N N 274 PRO HB3 H N N 275 PRO HG2 H N N 276 PRO HG3 H N N 277 PRO HD2 H N N 278 PRO HD3 H N N 279 PRO HXT H N N 280 SER N N N N 281 SER CA C N S 282 SER C C N N 283 SER O O N N 284 SER CB C N N 285 SER OG O N N 286 SER OXT O N N 287 SER H H N N 288 SER H2 H N N 289 SER HA H N N 290 SER HB2 H N N 291 SER HB3 H N N 292 SER HG H N N 293 SER HXT H N N 294 THR N N N N 295 THR CA C N S 296 THR C C N N 297 THR O O N N 298 THR CB C N R 299 THR OG1 O N N 300 THR CG2 C N N 301 THR OXT O N N 302 THR H H N N 303 THR H2 H N N 304 THR HA H N N 305 THR HB H N N 306 THR HG1 H N N 307 THR HG21 H N N 308 THR HG22 H N N 309 THR HG23 H N N 310 THR HXT H N N 311 TRP N N N N 312 TRP CA C N S 313 TRP C C N N 314 TRP O O N N 315 TRP CB C N N 316 TRP CG C Y N 317 TRP CD1 C Y N 318 TRP CD2 C Y N 319 TRP NE1 N Y N 320 TRP CE2 C Y N 321 TRP CE3 C Y N 322 TRP CZ2 C Y N 323 TRP CZ3 C Y N 324 TRP CH2 C Y N 325 TRP OXT O N N 326 TRP H H N N 327 TRP H2 H N N 328 TRP HA H N N 329 TRP HB2 H N N 330 TRP HB3 H N N 331 TRP HD1 H N N 332 TRP HE1 H N N 333 TRP HE3 H N N 334 TRP HZ2 H N N 335 TRP HZ3 H N N 336 TRP HH2 H N N 337 TRP HXT H N N 338 TYR N N N N 339 TYR CA C N S 340 TYR C C N N 341 TYR O O N N 342 TYR CB C N N 343 TYR CG C Y N 344 TYR CD1 C Y N 345 TYR CD2 C Y N 346 TYR CE1 C Y N 347 TYR CE2 C Y N 348 TYR CZ C Y N 349 TYR OH O N N 350 TYR OXT O N N 351 TYR H H N N 352 TYR H2 H N N 353 TYR HA H N N 354 TYR HB2 H N N 355 TYR HB3 H N N 356 TYR HD1 H N N 357 TYR HD2 H N N 358 TYR HE1 H N N 359 TYR HE2 H N N 360 TYR HH H N N 361 TYR HXT H N N 362 VAL N N N N 363 VAL CA C N S 364 VAL C C N N 365 VAL O O N N 366 VAL CB C N N 367 VAL CG1 C N N 368 VAL CG2 C N N 369 VAL OXT O N N 370 VAL H H N N 371 VAL H2 H N N 372 VAL HA H N N 373 VAL HB H N N 374 VAL HG11 H N N 375 VAL HG12 H N N 376 VAL HG13 H N N 377 VAL HG21 H N N 378 VAL HG22 H N N 379 VAL HG23 H N N 380 VAL HXT H N N 381 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 FMT C O1 doub N N 70 FMT C O2 sing N N 71 FMT C H sing N N 72 FMT O2 HO2 sing N N 73 GLN N CA sing N N 74 GLN N H sing N N 75 GLN N H2 sing N N 76 GLN CA C sing N N 77 GLN CA CB sing N N 78 GLN CA HA sing N N 79 GLN C O doub N N 80 GLN C OXT sing N N 81 GLN CB CG sing N N 82 GLN CB HB2 sing N N 83 GLN CB HB3 sing N N 84 GLN CG CD sing N N 85 GLN CG HG2 sing N N 86 GLN CG HG3 sing N N 87 GLN CD OE1 doub N N 88 GLN CD NE2 sing N N 89 GLN NE2 HE21 sing N N 90 GLN NE2 HE22 sing N N 91 GLN OXT HXT sing N N 92 GLU N CA sing N N 93 GLU N H sing N N 94 GLU N H2 sing N N 95 GLU CA C sing N N 96 GLU CA CB sing N N 97 GLU CA HA sing N N 98 GLU C O doub N N 99 GLU C OXT sing N N 100 GLU CB CG sing N N 101 GLU CB HB2 sing N N 102 GLU CB HB3 sing N N 103 GLU CG CD sing N N 104 GLU CG HG2 sing N N 105 GLU CG HG3 sing N N 106 GLU CD OE1 doub N N 107 GLU CD OE2 sing N N 108 GLU OE2 HE2 sing N N 109 GLU OXT HXT sing N N 110 GLY N CA sing N N 111 GLY N H sing N N 112 GLY N H2 sing N N 113 GLY CA C sing N N 114 GLY CA HA2 sing N N 115 GLY CA HA3 sing N N 116 GLY C O doub N N 117 GLY C OXT sing N N 118 GLY OXT HXT sing N N 119 HIS N CA sing N N 120 HIS N H sing N N 121 HIS N H2 sing N N 122 HIS CA C sing N N 123 HIS CA CB sing N N 124 HIS CA HA sing N N 125 HIS C O doub N N 126 HIS C OXT sing N N 127 HIS CB CG sing N N 128 HIS CB HB2 sing N N 129 HIS CB HB3 sing N N 130 HIS CG ND1 sing Y N 131 HIS CG CD2 doub Y N 132 HIS ND1 CE1 doub Y N 133 HIS ND1 HD1 sing N N 134 HIS CD2 NE2 sing Y N 135 HIS CD2 HD2 sing N N 136 HIS CE1 NE2 sing Y N 137 HIS CE1 HE1 sing N N 138 HIS NE2 HE2 sing N N 139 HIS OXT HXT sing N N 140 HOH O H1 sing N N 141 HOH O H2 sing N N 142 ILE N CA sing N N 143 ILE N H sing N N 144 ILE N H2 sing N N 145 ILE CA C sing N N 146 ILE CA CB sing N N 147 ILE CA HA sing N N 148 ILE C O doub N N 149 ILE C OXT sing N N 150 ILE CB CG1 sing N N 151 ILE CB CG2 sing N N 152 ILE CB HB sing N N 153 ILE CG1 CD1 sing N N 154 ILE CG1 HG12 sing N N 155 ILE CG1 HG13 sing N N 156 ILE CG2 HG21 sing N N 157 ILE CG2 HG22 sing N N 158 ILE CG2 HG23 sing N N 159 ILE CD1 HD11 sing N N 160 ILE CD1 HD12 sing N N 161 ILE CD1 HD13 sing N N 162 ILE OXT HXT sing N N 163 LEU N CA sing N N 164 LEU N H sing N N 165 LEU N H2 sing N N 166 LEU CA C sing N N 167 LEU CA CB sing N N 168 LEU CA HA sing N N 169 LEU C O doub N N 170 LEU C OXT sing N N 171 LEU CB CG sing N N 172 LEU CB HB2 sing N N 173 LEU CB HB3 sing N N 174 LEU CG CD1 sing N N 175 LEU CG CD2 sing N N 176 LEU CG HG sing N N 177 LEU CD1 HD11 sing N N 178 LEU CD1 HD12 sing N N 179 LEU CD1 HD13 sing N N 180 LEU CD2 HD21 sing N N 181 LEU CD2 HD22 sing N N 182 LEU CD2 HD23 sing N N 183 LEU OXT HXT sing N N 184 LYS N CA sing N N 185 LYS N H sing N N 186 LYS N H2 sing N N 187 LYS CA C sing N N 188 LYS CA CB sing N N 189 LYS CA HA sing N N 190 LYS C O doub N N 191 LYS C OXT sing N N 192 LYS CB CG sing N N 193 LYS CB HB2 sing N N 194 LYS CB HB3 sing N N 195 LYS CG CD sing N N 196 LYS CG HG2 sing N N 197 LYS CG HG3 sing N N 198 LYS CD CE sing N N 199 LYS CD HD2 sing N N 200 LYS CD HD3 sing N N 201 LYS CE NZ sing N N 202 LYS CE HE2 sing N N 203 LYS CE HE3 sing N N 204 LYS NZ HZ1 sing N N 205 LYS NZ HZ2 sing N N 206 LYS NZ HZ3 sing N N 207 LYS OXT HXT sing N N 208 MET N CA sing N N 209 MET N H sing N N 210 MET N H2 sing N N 211 MET CA C sing N N 212 MET CA CB sing N N 213 MET CA HA sing N N 214 MET C O doub N N 215 MET C OXT sing N N 216 MET CB CG sing N N 217 MET CB HB2 sing N N 218 MET CB HB3 sing N N 219 MET CG SD sing N N 220 MET CG HG2 sing N N 221 MET CG HG3 sing N N 222 MET SD CE sing N N 223 MET CE HE1 sing N N 224 MET CE HE2 sing N N 225 MET CE HE3 sing N N 226 MET OXT HXT sing N N 227 PHE N CA sing N N 228 PHE N H sing N N 229 PHE N H2 sing N N 230 PHE CA C sing N N 231 PHE CA CB sing N N 232 PHE CA HA sing N N 233 PHE C O doub N N 234 PHE C OXT sing N N 235 PHE CB CG sing N N 236 PHE CB HB2 sing N N 237 PHE CB HB3 sing N N 238 PHE CG CD1 doub Y N 239 PHE CG CD2 sing Y N 240 PHE CD1 CE1 sing Y N 241 PHE CD1 HD1 sing N N 242 PHE CD2 CE2 doub Y N 243 PHE CD2 HD2 sing N N 244 PHE CE1 CZ doub Y N 245 PHE CE1 HE1 sing N N 246 PHE CE2 CZ sing Y N 247 PHE CE2 HE2 sing N N 248 PHE CZ HZ sing N N 249 PHE OXT HXT sing N N 250 PRO N CA sing N N 251 PRO N CD sing N N 252 PRO N H sing N N 253 PRO CA C sing N N 254 PRO CA CB sing N N 255 PRO CA HA sing N N 256 PRO C O doub N N 257 PRO C OXT sing N N 258 PRO CB CG sing N N 259 PRO CB HB2 sing N N 260 PRO CB HB3 sing N N 261 PRO CG CD sing N N 262 PRO CG HG2 sing N N 263 PRO CG HG3 sing N N 264 PRO CD HD2 sing N N 265 PRO CD HD3 sing N N 266 PRO OXT HXT sing N N 267 SER N CA sing N N 268 SER N H sing N N 269 SER N H2 sing N N 270 SER CA C sing N N 271 SER CA CB sing N N 272 SER CA HA sing N N 273 SER C O doub N N 274 SER C OXT sing N N 275 SER CB OG sing N N 276 SER CB HB2 sing N N 277 SER CB HB3 sing N N 278 SER OG HG sing N N 279 SER OXT HXT sing N N 280 THR N CA sing N N 281 THR N H sing N N 282 THR N H2 sing N N 283 THR CA C sing N N 284 THR CA CB sing N N 285 THR CA HA sing N N 286 THR C O doub N N 287 THR C OXT sing N N 288 THR CB OG1 sing N N 289 THR CB CG2 sing N N 290 THR CB HB sing N N 291 THR OG1 HG1 sing N N 292 THR CG2 HG21 sing N N 293 THR CG2 HG22 sing N N 294 THR CG2 HG23 sing N N 295 THR OXT HXT sing N N 296 TRP N CA sing N N 297 TRP N H sing N N 298 TRP N H2 sing N N 299 TRP CA C sing N N 300 TRP CA CB sing N N 301 TRP CA HA sing N N 302 TRP C O doub N N 303 TRP C OXT sing N N 304 TRP CB CG sing N N 305 TRP CB HB2 sing N N 306 TRP CB HB3 sing N N 307 TRP CG CD1 doub Y N 308 TRP CG CD2 sing Y N 309 TRP CD1 NE1 sing Y N 310 TRP CD1 HD1 sing N N 311 TRP CD2 CE2 doub Y N 312 TRP CD2 CE3 sing Y N 313 TRP NE1 CE2 sing Y N 314 TRP NE1 HE1 sing N N 315 TRP CE2 CZ2 sing Y N 316 TRP CE3 CZ3 doub Y N 317 TRP CE3 HE3 sing N N 318 TRP CZ2 CH2 doub Y N 319 TRP CZ2 HZ2 sing N N 320 TRP CZ3 CH2 sing Y N 321 TRP CZ3 HZ3 sing N N 322 TRP CH2 HH2 sing N N 323 TRP OXT HXT sing N N 324 TYR N CA sing N N 325 TYR N H sing N N 326 TYR N H2 sing N N 327 TYR CA C sing N N 328 TYR CA CB sing N N 329 TYR CA HA sing N N 330 TYR C O doub N N 331 TYR C OXT sing N N 332 TYR CB CG sing N N 333 TYR CB HB2 sing N N 334 TYR CB HB3 sing N N 335 TYR CG CD1 doub Y N 336 TYR CG CD2 sing Y N 337 TYR CD1 CE1 sing Y N 338 TYR CD1 HD1 sing N N 339 TYR CD2 CE2 doub Y N 340 TYR CD2 HD2 sing N N 341 TYR CE1 CZ doub Y N 342 TYR CE1 HE1 sing N N 343 TYR CE2 CZ sing Y N 344 TYR CE2 HE2 sing N N 345 TYR CZ OH sing N N 346 TYR OH HH sing N N 347 TYR OXT HXT sing N N 348 VAL N CA sing N N 349 VAL N H sing N N 350 VAL N H2 sing N N 351 VAL CA C sing N N 352 VAL CA CB sing N N 353 VAL CA HA sing N N 354 VAL C O doub N N 355 VAL C OXT sing N N 356 VAL CB CG1 sing N N 357 VAL CB CG2 sing N N 358 VAL CB HB sing N N 359 VAL CG1 HG11 sing N N 360 VAL CG1 HG12 sing N N 361 VAL CG1 HG13 sing N N 362 VAL CG2 HG21 sing N N 363 VAL CG2 HG22 sing N N 364 VAL CG2 HG23 sing N N 365 VAL OXT HXT sing N N 366 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'FORMIC ACID' FMT 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3L92 _pdbx_initial_refinement_model.details ? #