data_3LBW # _entry.id 3LBW # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3LBW pdb_00003lbw 10.2210/pdb3lbw/pdb RCSB RCSB057086 ? ? WWPDB D_1000057086 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3LBW _pdbx_database_status.recvd_initial_deposition_date 2010-01-08 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Acharya, R.' 1 'Polishchuk, A.L.' 2 'DeGrado, W.F.' 3 # _citation.id primary _citation.title 'Structure and mechanism of proton transport through the transmembrane tetrameric M2 protein bundle of the influenza A virus.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 107 _citation.page_first 15075 _citation.page_last 15080 _citation.year 2010 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20689043 _citation.pdbx_database_id_DOI 10.1073/pnas.1007071107 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Acharya, R.' 1 ? primary 'Carnevale, V.' 2 ? primary 'Fiorin, G.' 3 ? primary 'Levine, B.G.' 4 ? primary 'Polishchuk, A.L.' 5 ? primary 'Balannik, V.' 6 ? primary 'Samish, I.' 7 ? primary 'Lamb, R.A.' 8 ? primary 'Pinto, L.H.' 9 ? primary 'DeGrado, W.F.' 10 ? primary 'Klein, M.L.' 11 ? # _cell.entry_id 3LBW _cell.length_a 48.665 _cell.length_b 79.091 _cell.length_c 48.559 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3LBW _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'M2 protein' 2453.085 4 ? G34A 'Transmembrane domain, residues 25-46' ? 2 non-polymer syn '4-bromobenzoic acid' 201.017 4 ? ? ? ? 3 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 3 ? ? ? ? 4 non-polymer man Xylitol 152.146 1 ? ? ? ? 5 water nat water 18.015 23 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'PLVVAASIIAILHLILWILDRL(NH2)' _entity_poly.pdbx_seq_one_letter_code_can PLVVAASIIAILHLILWILDRLX _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 LEU n 1 3 VAL n 1 4 VAL n 1 5 ALA n 1 6 ALA n 1 7 SER n 1 8 ILE n 1 9 ILE n 1 10 ALA n 1 11 ILE n 1 12 LEU n 1 13 HIS n 1 14 LEU n 1 15 ILE n 1 16 LEU n 1 17 TRP n 1 18 ILE n 1 19 LEU n 1 20 ASP n 1 21 ARG n 1 22 LEU n 1 23 NH2 n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'influenza A virus' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 119210 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9YP62_9INFA _struct_ref.pdbx_db_accession Q9YP62 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code PLVVAASIIGILHLILWILDRL _struct_ref.pdbx_align_begin 25 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3LBW A 1 ? 22 ? Q9YP62 25 ? 46 ? 25 46 2 1 3LBW B 1 ? 22 ? Q9YP62 25 ? 46 ? 25 46 3 1 3LBW C 1 ? 22 ? Q9YP62 25 ? 46 ? 25 46 4 1 3LBW D 1 ? 22 ? Q9YP62 25 ? 46 ? 25 46 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3LBW ALA A 10 ? UNP Q9YP62 GLY 34 'engineered mutation' 34 1 1 3LBW NH2 A 23 ? UNP Q9YP62 ? ? amidation 47 2 2 3LBW ALA B 10 ? UNP Q9YP62 GLY 34 'engineered mutation' 34 3 2 3LBW NH2 B 23 ? UNP Q9YP62 ? ? amidation 47 4 3 3LBW ALA C 10 ? UNP Q9YP62 GLY 34 'engineered mutation' 34 5 3 3LBW NH2 C 23 ? UNP Q9YP62 ? ? amidation 47 6 4 3LBW ALA D 10 ? UNP Q9YP62 GLY 34 'engineered mutation' 34 7 4 3LBW NH2 D 23 ? UNP Q9YP62 ? ? amidation 47 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 XYL D-saccharide . Xylitol D-Xylitol 'C5 H12 O5' 152.146 Z82 non-polymer . '4-bromobenzoic acid' ? 'C7 H5 Br O2' 201.017 # _exptl.entry_id 3LBW _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.38 _exptl_crystal.density_percent_sol 48.34 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details ;Protein solution: 0.8mM M2TM (25-46) peptide (as monomer),28mM Octyl-beta-D-Glucopyranosie and 5% xylitol. Reservoir solution: 95% [100mM sodium citrate pH 5.6, 150mM tri-sodium citrate, 15% v/v isopropanol] and 5% [0.2M MgCl2 6H20, 0.1M Tris-Hcl pH 8.5, 30% w/v PEG 4000], VAPOR DIFFUSION, HANGING DROP ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2008-04-25 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Monochromator: Si(111) channel cut monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.91910 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X6A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X6A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.91910 # _reflns.entry_id 3LBW _reflns.observed_criterion_sigma_I 1.0 _reflns.observed_criterion_sigma_F 1.0 _reflns.d_resolution_low 48.56 _reflns.d_resolution_high 1.65 _reflns.number_obs 11509 _reflns.number_all 11567 _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs 0.070 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 19.4 _reflns.B_iso_Wilson_estimate 15.278 _reflns.pdbx_redundancy 6.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.65 _reflns_shell.d_res_low 1.74 _reflns_shell.percent_possible_all 96.6 _reflns_shell.Rmerge_I_obs 0.447 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.7 _reflns_shell.pdbx_redundancy 4.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1599 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3LBW _refine.ls_number_reflns_obs 10998 _refine.ls_number_reflns_all 10998 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 31.53 _refine.ls_d_res_high 1.65 _refine.ls_percent_reflns_obs 100.00 _refine.ls_R_factor_obs 0.19664 _refine.ls_R_factor_all 0.207 _refine.ls_R_factor_R_work 0.19621 _refine.ls_R_factor_R_free 0.20529 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 554 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.947 _refine.correlation_coeff_Fo_to_Fc_free 0.945 _refine.B_iso_mean 15.431 _refine.aniso_B[1][1] -0.16 _refine.aniso_B[2][2] 0.14 _refine.aniso_B[3][3] 0.02 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model '3BKD, chain A' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.104 _refine.pdbx_overall_ESU_R_Free 0.092 _refine.overall_SU_ML 0.056 _refine.overall_SU_B 1.665 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 696 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 67 _refine_hist.number_atoms_solvent 23 _refine_hist.number_atoms_total 786 _refine_hist.d_res_high 1.65 _refine_hist.d_res_low 31.53 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.007 0.022 ? 775 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 0.866 2.051 ? 1034 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 2.858 5.000 ? 84 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 53.922 20.000 ? 16 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.004 15.000 ? 124 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 19.336 15.000 ? 4 'X-RAY DIFFRACTION' ? r_chiral_restr 0.054 0.200 ? 143 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.003 0.020 ? 468 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.455 1.500 ? 448 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.806 2.000 ? 716 'X-RAY DIFFRACTION' ? r_scbond_it 1.229 3.000 ? 327 'X-RAY DIFFRACTION' ? r_scangle_it 2.043 4.500 ? 318 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.650 _refine_ls_shell.d_res_low 1.693 _refine_ls_shell.number_reflns_R_work 750 _refine_ls_shell.R_factor_R_work 0.284 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.265 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 38 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3LBW _struct.title 'High resolution crystal structure of transmembrane domain of M2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3LBW _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' _struct_keywords.text ;Proton channel, M2TM, Influenza A virus M2 protein, Host cell membrane, Hydrogen ion transport, Ionic channel, Transmembrane, Virion, TRANSPORT PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 3 ? G N N 2 ? H N N 4 ? I N N 2 ? J N N 3 ? K N N 3 ? L N N 2 ? M N N 5 ? N N N 5 ? O N N 5 ? P N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 1 ? LEU A 22 ? PRO A 25 LEU A 46 1 ? 22 HELX_P HELX_P2 2 PRO B 1 ? LEU B 22 ? PRO B 25 LEU B 46 1 ? 22 HELX_P HELX_P3 3 PRO C 1 ? LEU C 22 ? PRO C 25 LEU C 46 1 ? 22 HELX_P HELX_P4 4 PRO D 1 ? LEU D 22 ? PRO D 25 LEU D 46 1 ? 22 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? E Z82 . C7 ? ? ? 1_555 A PRO 1 N ? ? A Z82 24 A PRO 25 1_555 ? ? ? ? ? ? ? 1.346 ? ? covale2 covale both ? A LEU 22 C ? ? ? 1_555 A NH2 23 N ? ? A LEU 46 A NH2 47 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale3 covale both ? G Z82 . C7 ? ? ? 1_555 B PRO 1 N ? ? B Z82 24 B PRO 25 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale4 covale both ? B LEU 22 C ? ? ? 1_555 B NH2 23 N ? ? B LEU 46 B NH2 47 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale5 covale both ? I Z82 . C7 ? ? ? 1_555 C PRO 1 N ? ? C Z82 24 C PRO 25 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale6 covale both ? C LEU 22 C ? ? ? 1_555 C NH2 23 N ? ? C LEU 46 C NH2 47 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale7 covale both ? L Z82 . C7 ? ? ? 1_555 D PRO 1 N ? ? D Z82 24 D PRO 25 1_555 ? ? ? ? ? ? ? 1.346 ? ? covale8 covale both ? D LEU 22 C ? ? ? 1_555 D NH2 23 N ? ? D LEU 46 D NH2 47 1_555 ? ? ? ? ? ? ? 1.315 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 3LBW _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3LBW _atom_sites.fract_transf_matrix[1][1] 0.020549 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012644 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020594 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BR C N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 25 25 PRO PRO A . n A 1 2 LEU 2 26 26 LEU LEU A . n A 1 3 VAL 3 27 27 VAL VAL A . n A 1 4 VAL 4 28 28 VAL VAL A . n A 1 5 ALA 5 29 29 ALA ALA A . n A 1 6 ALA 6 30 30 ALA ALA A . n A 1 7 SER 7 31 31 SER SER A . n A 1 8 ILE 8 32 32 ILE ILE A . n A 1 9 ILE 9 33 33 ILE ILE A . n A 1 10 ALA 10 34 34 ALA ALA A . n A 1 11 ILE 11 35 35 ILE ILE A . n A 1 12 LEU 12 36 36 LEU LEU A . n A 1 13 HIS 13 37 37 HIS HIS A . n A 1 14 LEU 14 38 38 LEU LEU A . n A 1 15 ILE 15 39 39 ILE ILE A . n A 1 16 LEU 16 40 40 LEU LEU A . n A 1 17 TRP 17 41 41 TRP TRP A . n A 1 18 ILE 18 42 42 ILE ILE A . n A 1 19 LEU 19 43 43 LEU LEU A . n A 1 20 ASP 20 44 44 ASP ASP A . n A 1 21 ARG 21 45 45 ARG ARG A . n A 1 22 LEU 22 46 46 LEU LEU A . n A 1 23 NH2 23 47 47 NH2 NH2 A . n B 1 1 PRO 1 25 25 PRO PRO B . n B 1 2 LEU 2 26 26 LEU LEU B . n B 1 3 VAL 3 27 27 VAL VAL B . n B 1 4 VAL 4 28 28 VAL VAL B . n B 1 5 ALA 5 29 29 ALA ALA B . n B 1 6 ALA 6 30 30 ALA ALA B . n B 1 7 SER 7 31 31 SER SER B . n B 1 8 ILE 8 32 32 ILE ILE B . n B 1 9 ILE 9 33 33 ILE ILE B . n B 1 10 ALA 10 34 34 ALA ALA B . n B 1 11 ILE 11 35 35 ILE ILE B . n B 1 12 LEU 12 36 36 LEU LEU B . n B 1 13 HIS 13 37 37 HIS HIS B . n B 1 14 LEU 14 38 38 LEU LEU B . n B 1 15 ILE 15 39 39 ILE ILE B . n B 1 16 LEU 16 40 40 LEU LEU B . n B 1 17 TRP 17 41 41 TRP TRP B . n B 1 18 ILE 18 42 42 ILE ILE B . n B 1 19 LEU 19 43 43 LEU LEU B . n B 1 20 ASP 20 44 44 ASP ASP B . n B 1 21 ARG 21 45 45 ARG ARG B . n B 1 22 LEU 22 46 46 LEU LEU B . n B 1 23 NH2 23 47 47 NH2 NH2 B . n C 1 1 PRO 1 25 25 PRO PRO C . n C 1 2 LEU 2 26 26 LEU LEU C . n C 1 3 VAL 3 27 27 VAL VAL C . n C 1 4 VAL 4 28 28 VAL VAL C . n C 1 5 ALA 5 29 29 ALA ALA C . n C 1 6 ALA 6 30 30 ALA ALA C . n C 1 7 SER 7 31 31 SER SER C . n C 1 8 ILE 8 32 32 ILE ILE C . n C 1 9 ILE 9 33 33 ILE ILE C . n C 1 10 ALA 10 34 34 ALA ALA C . n C 1 11 ILE 11 35 35 ILE ILE C . n C 1 12 LEU 12 36 36 LEU LEU C . n C 1 13 HIS 13 37 37 HIS HIS C . n C 1 14 LEU 14 38 38 LEU LEU C . n C 1 15 ILE 15 39 39 ILE ILE C . n C 1 16 LEU 16 40 40 LEU LEU C . n C 1 17 TRP 17 41 41 TRP TRP C . n C 1 18 ILE 18 42 42 ILE ILE C . n C 1 19 LEU 19 43 43 LEU LEU C . n C 1 20 ASP 20 44 44 ASP ASP C . n C 1 21 ARG 21 45 45 ARG ARG C . n C 1 22 LEU 22 46 46 LEU LEU C . n C 1 23 NH2 23 47 47 NH2 NH2 C . n D 1 1 PRO 1 25 25 PRO PRO D . n D 1 2 LEU 2 26 26 LEU LEU D . n D 1 3 VAL 3 27 27 VAL VAL D . n D 1 4 VAL 4 28 28 VAL VAL D . n D 1 5 ALA 5 29 29 ALA ALA D . n D 1 6 ALA 6 30 30 ALA ALA D . n D 1 7 SER 7 31 31 SER SER D . n D 1 8 ILE 8 32 32 ILE ILE D . n D 1 9 ILE 9 33 33 ILE ILE D . n D 1 10 ALA 10 34 34 ALA ALA D . n D 1 11 ILE 11 35 35 ILE ILE D . n D 1 12 LEU 12 36 36 LEU LEU D . n D 1 13 HIS 13 37 37 HIS HIS D . n D 1 14 LEU 14 38 38 LEU LEU D . n D 1 15 ILE 15 39 39 ILE ILE D . n D 1 16 LEU 16 40 40 LEU LEU D . n D 1 17 TRP 17 41 41 TRP TRP D . n D 1 18 ILE 18 42 42 ILE ILE D . n D 1 19 LEU 19 43 43 LEU LEU D . n D 1 20 ASP 20 44 44 ASP ASP D . n D 1 21 ARG 21 45 45 ARG ARG D . n D 1 22 LEU 22 46 46 LEU LEU D . n D 1 23 NH2 23 47 47 NH2 NH2 D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 Z82 1 24 24 Z82 Z82 A . F 3 PEG 1 48 48 PEG PEG A . G 2 Z82 1 24 24 Z82 Z82 B . H 4 XYL 1 48 48 XYL XYL B . I 2 Z82 1 24 24 Z82 Z82 C . J 3 PEG 1 49 49 PEG PEG C . K 3 PEG 1 50 50 PEG PEG C . L 2 Z82 1 24 24 Z82 Z82 D . M 5 HOH 1 100 100 HOH HOH A . M 5 HOH 2 101 101 HOH HOH A . M 5 HOH 3 102 102 HOH HOH A . M 5 HOH 4 103 103 HOH HOH A . N 5 HOH 1 104 104 HOH HOH B . N 5 HOH 2 105 105 HOH HOH B . N 5 HOH 3 106 106 HOH HOH B . N 5 HOH 4 107 107 HOH HOH B . N 5 HOH 5 108 108 HOH HOH B . N 5 HOH 6 109 109 HOH HOH B . N 5 HOH 7 110 110 HOH HOH B . N 5 HOH 8 111 111 HOH HOH B . N 5 HOH 9 112 112 HOH HOH B . N 5 HOH 10 113 113 HOH HOH B . O 5 HOH 1 114 114 HOH HOH C . O 5 HOH 2 115 115 HOH HOH C . O 5 HOH 3 116 116 HOH HOH C . O 5 HOH 4 117 117 HOH HOH C . O 5 HOH 5 118 118 HOH HOH C . P 5 HOH 1 119 119 HOH HOH D . P 5 HOH 2 120 120 HOH HOH D . P 5 HOH 3 121 121 HOH HOH D . P 5 HOH 4 122 122 HOH HOH D . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4280 ? 1 MORE -39 ? 1 'SSA (A^2)' 5450 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-07-28 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2011-08-10 4 'Structure model' 1 3 2020-07-29 5 'Structure model' 1 4 2021-10-13 6 'Structure model' 1 5 2023-09-06 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Structure summary' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Structure summary' 8 6 'Structure model' 'Data collection' 9 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp 2 4 'Structure model' entity 3 4 'Structure model' pdbx_entity_nonpoly 4 4 'Structure model' struct_conn 5 4 'Structure model' struct_ref_seq_dif 6 4 'Structure model' struct_site 7 4 'Structure model' struct_site_gen 8 5 'Structure model' chem_comp 9 5 'Structure model' database_2 10 5 'Structure model' struct_ref_seq_dif 11 6 'Structure model' chem_comp_atom 12 6 'Structure model' chem_comp_bond 13 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_chem_comp.name' 2 4 'Structure model' '_chem_comp.type' 3 4 'Structure model' '_entity.pdbx_description' 4 4 'Structure model' '_pdbx_entity_nonpoly.name' 5 4 'Structure model' '_struct_conn.pdbx_dist_value' 6 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 8 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 9 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 10 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 11 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 12 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 13 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 14 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 15 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 16 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 17 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 18 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 19 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 20 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 21 4 'Structure model' '_struct_ref_seq_dif.details' 22 5 'Structure model' '_chem_comp.pdbx_synonyms' 23 5 'Structure model' '_database_2.pdbx_DOI' 24 5 'Structure model' '_database_2.pdbx_database_accession' 25 5 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CBASS 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.5.0072 ? 3 MOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASP N N N N 41 ASP CA C N S 42 ASP C C N N 43 ASP O O N N 44 ASP CB C N N 45 ASP CG C N N 46 ASP OD1 O N N 47 ASP OD2 O N N 48 ASP OXT O N N 49 ASP H H N N 50 ASP H2 H N N 51 ASP HA H N N 52 ASP HB2 H N N 53 ASP HB3 H N N 54 ASP HD2 H N N 55 ASP HXT H N N 56 GLY N N N N 57 GLY CA C N N 58 GLY C C N N 59 GLY O O N N 60 GLY OXT O N N 61 GLY H H N N 62 GLY H2 H N N 63 GLY HA2 H N N 64 GLY HA3 H N N 65 GLY HXT H N N 66 HIS N N N N 67 HIS CA C N S 68 HIS C C N N 69 HIS O O N N 70 HIS CB C N N 71 HIS CG C Y N 72 HIS ND1 N Y N 73 HIS CD2 C Y N 74 HIS CE1 C Y N 75 HIS NE2 N Y N 76 HIS OXT O N N 77 HIS H H N N 78 HIS H2 H N N 79 HIS HA H N N 80 HIS HB2 H N N 81 HIS HB3 H N N 82 HIS HD1 H N N 83 HIS HD2 H N N 84 HIS HE1 H N N 85 HIS HE2 H N N 86 HIS HXT H N N 87 HOH O O N N 88 HOH H1 H N N 89 HOH H2 H N N 90 ILE N N N N 91 ILE CA C N S 92 ILE C C N N 93 ILE O O N N 94 ILE CB C N S 95 ILE CG1 C N N 96 ILE CG2 C N N 97 ILE CD1 C N N 98 ILE OXT O N N 99 ILE H H N N 100 ILE H2 H N N 101 ILE HA H N N 102 ILE HB H N N 103 ILE HG12 H N N 104 ILE HG13 H N N 105 ILE HG21 H N N 106 ILE HG22 H N N 107 ILE HG23 H N N 108 ILE HD11 H N N 109 ILE HD12 H N N 110 ILE HD13 H N N 111 ILE HXT H N N 112 LEU N N N N 113 LEU CA C N S 114 LEU C C N N 115 LEU O O N N 116 LEU CB C N N 117 LEU CG C N N 118 LEU CD1 C N N 119 LEU CD2 C N N 120 LEU OXT O N N 121 LEU H H N N 122 LEU H2 H N N 123 LEU HA H N N 124 LEU HB2 H N N 125 LEU HB3 H N N 126 LEU HG H N N 127 LEU HD11 H N N 128 LEU HD12 H N N 129 LEU HD13 H N N 130 LEU HD21 H N N 131 LEU HD22 H N N 132 LEU HD23 H N N 133 LEU HXT H N N 134 NH2 N N N N 135 NH2 HN1 H N N 136 NH2 HN2 H N N 137 PEG C1 C N N 138 PEG O1 O N N 139 PEG C2 C N N 140 PEG O2 O N N 141 PEG C3 C N N 142 PEG C4 C N N 143 PEG O4 O N N 144 PEG H11 H N N 145 PEG H12 H N N 146 PEG HO1 H N N 147 PEG H21 H N N 148 PEG H22 H N N 149 PEG H31 H N N 150 PEG H32 H N N 151 PEG H41 H N N 152 PEG H42 H N N 153 PEG HO4 H N N 154 PRO N N N N 155 PRO CA C N S 156 PRO C C N N 157 PRO O O N N 158 PRO CB C N N 159 PRO CG C N N 160 PRO CD C N N 161 PRO OXT O N N 162 PRO H H N N 163 PRO HA H N N 164 PRO HB2 H N N 165 PRO HB3 H N N 166 PRO HG2 H N N 167 PRO HG3 H N N 168 PRO HD2 H N N 169 PRO HD3 H N N 170 PRO HXT H N N 171 SER N N N N 172 SER CA C N S 173 SER C C N N 174 SER O O N N 175 SER CB C N N 176 SER OG O N N 177 SER OXT O N N 178 SER H H N N 179 SER H2 H N N 180 SER HA H N N 181 SER HB2 H N N 182 SER HB3 H N N 183 SER HG H N N 184 SER HXT H N N 185 TRP N N N N 186 TRP CA C N S 187 TRP C C N N 188 TRP O O N N 189 TRP CB C N N 190 TRP CG C Y N 191 TRP CD1 C Y N 192 TRP CD2 C Y N 193 TRP NE1 N Y N 194 TRP CE2 C Y N 195 TRP CE3 C Y N 196 TRP CZ2 C Y N 197 TRP CZ3 C Y N 198 TRP CH2 C Y N 199 TRP OXT O N N 200 TRP H H N N 201 TRP H2 H N N 202 TRP HA H N N 203 TRP HB2 H N N 204 TRP HB3 H N N 205 TRP HD1 H N N 206 TRP HE1 H N N 207 TRP HE3 H N N 208 TRP HZ2 H N N 209 TRP HZ3 H N N 210 TRP HH2 H N N 211 TRP HXT H N N 212 VAL N N N N 213 VAL CA C N S 214 VAL C C N N 215 VAL O O N N 216 VAL CB C N N 217 VAL CG1 C N N 218 VAL CG2 C N N 219 VAL OXT O N N 220 VAL H H N N 221 VAL H2 H N N 222 VAL HA H N N 223 VAL HB H N N 224 VAL HG11 H N N 225 VAL HG12 H N N 226 VAL HG13 H N N 227 VAL HG21 H N N 228 VAL HG22 H N N 229 VAL HG23 H N N 230 VAL HXT H N N 231 XYL C1 C N N 232 XYL C2 C N S 233 XYL C3 C N R 234 XYL C4 C N R 235 XYL C5 C N N 236 XYL O1 O N N 237 XYL O2 O N N 238 XYL O3 O N N 239 XYL O4 O N N 240 XYL O5 O N N 241 XYL H11 H N N 242 XYL H12 H N N 243 XYL H2 H N N 244 XYL H3 H N N 245 XYL H4 H N N 246 XYL H51 H N N 247 XYL H52 H N N 248 XYL HO1 H N N 249 XYL HO2 H N N 250 XYL HO3 H N N 251 XYL HO4 H N N 252 XYL HO5 H N N 253 Z82 C1 C Y N 254 Z82 O1 O N N 255 Z82 C2 C Y N 256 Z82 C3 C Y N 257 Z82 C4 C Y N 258 Z82 BR4 BR N N 259 Z82 C5 C Y N 260 Z82 C6 C Y N 261 Z82 C7 C N N 262 Z82 H2 H N N 263 Z82 H3 H N N 264 Z82 H5 H N N 265 Z82 H6 H N N 266 Z82 O2 O N N 267 Z82 H51 H N N 268 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASP N CA sing N N 39 ASP N H sing N N 40 ASP N H2 sing N N 41 ASP CA C sing N N 42 ASP CA CB sing N N 43 ASP CA HA sing N N 44 ASP C O doub N N 45 ASP C OXT sing N N 46 ASP CB CG sing N N 47 ASP CB HB2 sing N N 48 ASP CB HB3 sing N N 49 ASP CG OD1 doub N N 50 ASP CG OD2 sing N N 51 ASP OD2 HD2 sing N N 52 ASP OXT HXT sing N N 53 GLY N CA sing N N 54 GLY N H sing N N 55 GLY N H2 sing N N 56 GLY CA C sing N N 57 GLY CA HA2 sing N N 58 GLY CA HA3 sing N N 59 GLY C O doub N N 60 GLY C OXT sing N N 61 GLY OXT HXT sing N N 62 HIS N CA sing N N 63 HIS N H sing N N 64 HIS N H2 sing N N 65 HIS CA C sing N N 66 HIS CA CB sing N N 67 HIS CA HA sing N N 68 HIS C O doub N N 69 HIS C OXT sing N N 70 HIS CB CG sing N N 71 HIS CB HB2 sing N N 72 HIS CB HB3 sing N N 73 HIS CG ND1 sing Y N 74 HIS CG CD2 doub Y N 75 HIS ND1 CE1 doub Y N 76 HIS ND1 HD1 sing N N 77 HIS CD2 NE2 sing Y N 78 HIS CD2 HD2 sing N N 79 HIS CE1 NE2 sing Y N 80 HIS CE1 HE1 sing N N 81 HIS NE2 HE2 sing N N 82 HIS OXT HXT sing N N 83 HOH O H1 sing N N 84 HOH O H2 sing N N 85 ILE N CA sing N N 86 ILE N H sing N N 87 ILE N H2 sing N N 88 ILE CA C sing N N 89 ILE CA CB sing N N 90 ILE CA HA sing N N 91 ILE C O doub N N 92 ILE C OXT sing N N 93 ILE CB CG1 sing N N 94 ILE CB CG2 sing N N 95 ILE CB HB sing N N 96 ILE CG1 CD1 sing N N 97 ILE CG1 HG12 sing N N 98 ILE CG1 HG13 sing N N 99 ILE CG2 HG21 sing N N 100 ILE CG2 HG22 sing N N 101 ILE CG2 HG23 sing N N 102 ILE CD1 HD11 sing N N 103 ILE CD1 HD12 sing N N 104 ILE CD1 HD13 sing N N 105 ILE OXT HXT sing N N 106 LEU N CA sing N N 107 LEU N H sing N N 108 LEU N H2 sing N N 109 LEU CA C sing N N 110 LEU CA CB sing N N 111 LEU CA HA sing N N 112 LEU C O doub N N 113 LEU C OXT sing N N 114 LEU CB CG sing N N 115 LEU CB HB2 sing N N 116 LEU CB HB3 sing N N 117 LEU CG CD1 sing N N 118 LEU CG CD2 sing N N 119 LEU CG HG sing N N 120 LEU CD1 HD11 sing N N 121 LEU CD1 HD12 sing N N 122 LEU CD1 HD13 sing N N 123 LEU CD2 HD21 sing N N 124 LEU CD2 HD22 sing N N 125 LEU CD2 HD23 sing N N 126 LEU OXT HXT sing N N 127 NH2 N HN1 sing N N 128 NH2 N HN2 sing N N 129 PEG C1 O1 sing N N 130 PEG C1 C2 sing N N 131 PEG C1 H11 sing N N 132 PEG C1 H12 sing N N 133 PEG O1 HO1 sing N N 134 PEG C2 O2 sing N N 135 PEG C2 H21 sing N N 136 PEG C2 H22 sing N N 137 PEG O2 C3 sing N N 138 PEG C3 C4 sing N N 139 PEG C3 H31 sing N N 140 PEG C3 H32 sing N N 141 PEG C4 O4 sing N N 142 PEG C4 H41 sing N N 143 PEG C4 H42 sing N N 144 PEG O4 HO4 sing N N 145 PRO N CA sing N N 146 PRO N CD sing N N 147 PRO N H sing N N 148 PRO CA C sing N N 149 PRO CA CB sing N N 150 PRO CA HA sing N N 151 PRO C O doub N N 152 PRO C OXT sing N N 153 PRO CB CG sing N N 154 PRO CB HB2 sing N N 155 PRO CB HB3 sing N N 156 PRO CG CD sing N N 157 PRO CG HG2 sing N N 158 PRO CG HG3 sing N N 159 PRO CD HD2 sing N N 160 PRO CD HD3 sing N N 161 PRO OXT HXT sing N N 162 SER N CA sing N N 163 SER N H sing N N 164 SER N H2 sing N N 165 SER CA C sing N N 166 SER CA CB sing N N 167 SER CA HA sing N N 168 SER C O doub N N 169 SER C OXT sing N N 170 SER CB OG sing N N 171 SER CB HB2 sing N N 172 SER CB HB3 sing N N 173 SER OG HG sing N N 174 SER OXT HXT sing N N 175 TRP N CA sing N N 176 TRP N H sing N N 177 TRP N H2 sing N N 178 TRP CA C sing N N 179 TRP CA CB sing N N 180 TRP CA HA sing N N 181 TRP C O doub N N 182 TRP C OXT sing N N 183 TRP CB CG sing N N 184 TRP CB HB2 sing N N 185 TRP CB HB3 sing N N 186 TRP CG CD1 doub Y N 187 TRP CG CD2 sing Y N 188 TRP CD1 NE1 sing Y N 189 TRP CD1 HD1 sing N N 190 TRP CD2 CE2 doub Y N 191 TRP CD2 CE3 sing Y N 192 TRP NE1 CE2 sing Y N 193 TRP NE1 HE1 sing N N 194 TRP CE2 CZ2 sing Y N 195 TRP CE3 CZ3 doub Y N 196 TRP CE3 HE3 sing N N 197 TRP CZ2 CH2 doub Y N 198 TRP CZ2 HZ2 sing N N 199 TRP CZ3 CH2 sing Y N 200 TRP CZ3 HZ3 sing N N 201 TRP CH2 HH2 sing N N 202 TRP OXT HXT sing N N 203 VAL N CA sing N N 204 VAL N H sing N N 205 VAL N H2 sing N N 206 VAL CA C sing N N 207 VAL CA CB sing N N 208 VAL CA HA sing N N 209 VAL C O doub N N 210 VAL C OXT sing N N 211 VAL CB CG1 sing N N 212 VAL CB CG2 sing N N 213 VAL CB HB sing N N 214 VAL CG1 HG11 sing N N 215 VAL CG1 HG12 sing N N 216 VAL CG1 HG13 sing N N 217 VAL CG2 HG21 sing N N 218 VAL CG2 HG22 sing N N 219 VAL CG2 HG23 sing N N 220 VAL OXT HXT sing N N 221 XYL C1 C2 sing N N 222 XYL C1 O1 sing N N 223 XYL C1 H11 sing N N 224 XYL C1 H12 sing N N 225 XYL C2 C3 sing N N 226 XYL C2 O2 sing N N 227 XYL C2 H2 sing N N 228 XYL C3 C4 sing N N 229 XYL C3 O3 sing N N 230 XYL C3 H3 sing N N 231 XYL C4 C5 sing N N 232 XYL C4 O4 sing N N 233 XYL C4 H4 sing N N 234 XYL C5 O5 sing N N 235 XYL C5 H51 sing N N 236 XYL C5 H52 sing N N 237 XYL O1 HO1 sing N N 238 XYL O2 HO2 sing N N 239 XYL O3 HO3 sing N N 240 XYL O4 HO4 sing N N 241 XYL O5 HO5 sing N N 242 Z82 C1 C7 sing N N 243 Z82 O1 C7 doub N N 244 Z82 C2 C1 doub Y N 245 Z82 C2 H2 sing N N 246 Z82 C3 C2 sing Y N 247 Z82 C3 H3 sing N N 248 Z82 C4 C3 doub Y N 249 Z82 C4 C5 sing Y N 250 Z82 BR4 C4 sing N N 251 Z82 C5 C6 doub Y N 252 Z82 C5 H5 sing N N 253 Z82 C6 C1 sing Y N 254 Z82 C6 H6 sing N N 255 Z82 C7 O2 sing N N 256 Z82 O2 H51 sing N N 257 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '4-bromobenzoic acid' Z82 3 'DI(HYDROXYETHYL)ETHER' PEG 4 Xylitol XYL 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3BKD _pdbx_initial_refinement_model.details '3BKD, chain A' #