data_3LEQ # _entry.id 3LEQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3LEQ pdb_00003leq 10.2210/pdb3leq/pdb RCSB RCSB057186 ? ? WWPDB D_1000057186 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-02-02 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-02-22 4 'Structure model' 1 3 2017-11-01 5 'Structure model' 1 4 2024-10-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Structure summary' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' 8 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_entry_details 6 5 'Structure model' pdbx_modification_feature 7 5 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_pdbx_entry_details.has_protein_modification' 4 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # _pdbx_database_status.entry_id 3LEQ _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-01-15 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC65473.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Stein, A.J.' 1 'Xu, X.' 2 'Cui, H.' 3 'Ng, J.' 4 'Edwards, A.' 5 'Savchenko, A.' 6 'Joachimiak, A.' 7 'Midwest Center for Structural Genomics (MCSG)' 8 # _citation.id primary _citation.title 'The Crystal Structure of the Roadblock/LC7 domain from Streptomyces avermitillis to 1.85A' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Stein, A.J.' 1 ? primary 'Xu, X.' 2 ? primary 'Cui, H.' 3 ? primary 'Ng, J.' 4 ? primary 'Edwards, A.' 5 ? primary 'Savchenko, A.' 6 ? primary 'Joachimiak, A.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'uncharacterized protein cvnB5' 13557.857 1 ? ? ? ? 2 water nat water 18.015 37 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Roadblock/LC7 domain' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;THSQLDQLLTGLVDRVAEVDHAVVLSEDGLVVSKSTGFLRDDAERLAATASGL(MSE)SLSKGVS(MSE)DFRRGPVRQA LIE(MSE)GKGYLILTAAGPGAHLVVLTRQGADVGVVAYQ(MSE)N(MSE)LVKKIGEHLSAPPRG ; _entity_poly.pdbx_seq_one_letter_code_can ;THSQLDQLLTGLVDRVAEVDHAVVLSEDGLVVSKSTGFLRDDAERLAATASGLMSLSKGVSMDFRRGPVRQALIEMGKGY LILTAAGPGAHLVVLTRQGADVGVVAYQMNMLVKKIGEHLSAPPRG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier APC65473.1 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 HIS n 1 3 SER n 1 4 GLN n 1 5 LEU n 1 6 ASP n 1 7 GLN n 1 8 LEU n 1 9 LEU n 1 10 THR n 1 11 GLY n 1 12 LEU n 1 13 VAL n 1 14 ASP n 1 15 ARG n 1 16 VAL n 1 17 ALA n 1 18 GLU n 1 19 VAL n 1 20 ASP n 1 21 HIS n 1 22 ALA n 1 23 VAL n 1 24 VAL n 1 25 LEU n 1 26 SER n 1 27 GLU n 1 28 ASP n 1 29 GLY n 1 30 LEU n 1 31 VAL n 1 32 VAL n 1 33 SER n 1 34 LYS n 1 35 SER n 1 36 THR n 1 37 GLY n 1 38 PHE n 1 39 LEU n 1 40 ARG n 1 41 ASP n 1 42 ASP n 1 43 ALA n 1 44 GLU n 1 45 ARG n 1 46 LEU n 1 47 ALA n 1 48 ALA n 1 49 THR n 1 50 ALA n 1 51 SER n 1 52 GLY n 1 53 LEU n 1 54 MSE n 1 55 SER n 1 56 LEU n 1 57 SER n 1 58 LYS n 1 59 GLY n 1 60 VAL n 1 61 SER n 1 62 MSE n 1 63 ASP n 1 64 PHE n 1 65 ARG n 1 66 ARG n 1 67 GLY n 1 68 PRO n 1 69 VAL n 1 70 ARG n 1 71 GLN n 1 72 ALA n 1 73 LEU n 1 74 ILE n 1 75 GLU n 1 76 MSE n 1 77 GLY n 1 78 LYS n 1 79 GLY n 1 80 TYR n 1 81 LEU n 1 82 ILE n 1 83 LEU n 1 84 THR n 1 85 ALA n 1 86 ALA n 1 87 GLY n 1 88 PRO n 1 89 GLY n 1 90 ALA n 1 91 HIS n 1 92 LEU n 1 93 VAL n 1 94 VAL n 1 95 LEU n 1 96 THR n 1 97 ARG n 1 98 GLN n 1 99 GLY n 1 100 ALA n 1 101 ASP n 1 102 VAL n 1 103 GLY n 1 104 VAL n 1 105 VAL n 1 106 ALA n 1 107 TYR n 1 108 GLN n 1 109 MSE n 1 110 ASN n 1 111 MSE n 1 112 LEU n 1 113 VAL n 1 114 LYS n 1 115 LYS n 1 116 ILE n 1 117 GLY n 1 118 GLU n 1 119 HIS n 1 120 LEU n 1 121 SER n 1 122 ALA n 1 123 PRO n 1 124 PRO n 1 125 ARG n 1 126 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'cvnB5, SAV2189, SAV_2189' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain MA-4680 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptomyces avermitilis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 227882 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pET derivative' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 8 ? ? ? A . n A 1 2 HIS 2 9 9 HIS HIS A . n A 1 3 SER 3 10 10 SER SER A . n A 1 4 GLN 4 11 11 GLN GLN A . n A 1 5 LEU 5 12 12 LEU LEU A . n A 1 6 ASP 6 13 13 ASP ASP A . n A 1 7 GLN 7 14 14 GLN GLN A . n A 1 8 LEU 8 15 15 LEU LEU A . n A 1 9 LEU 9 16 16 LEU LEU A . n A 1 10 THR 10 17 17 THR THR A . n A 1 11 GLY 11 18 18 GLY GLY A . n A 1 12 LEU 12 19 19 LEU LEU A . n A 1 13 VAL 13 20 20 VAL VAL A . n A 1 14 ASP 14 21 21 ASP ASP A . n A 1 15 ARG 15 22 22 ARG ARG A . n A 1 16 VAL 16 23 23 VAL VAL A . n A 1 17 ALA 17 24 24 ALA ALA A . n A 1 18 GLU 18 25 25 GLU GLU A . n A 1 19 VAL 19 26 26 VAL VAL A . n A 1 20 ASP 20 27 27 ASP ASP A . n A 1 21 HIS 21 28 28 HIS HIS A . n A 1 22 ALA 22 29 29 ALA ALA A . n A 1 23 VAL 23 30 30 VAL VAL A . n A 1 24 VAL 24 31 31 VAL VAL A . n A 1 25 LEU 25 32 32 LEU LEU A . n A 1 26 SER 26 33 33 SER SER A . n A 1 27 GLU 27 34 34 GLU GLU A . n A 1 28 ASP 28 35 35 ASP ASP A . n A 1 29 GLY 29 36 36 GLY GLY A . n A 1 30 LEU 30 37 37 LEU LEU A . n A 1 31 VAL 31 38 38 VAL VAL A . n A 1 32 VAL 32 39 39 VAL VAL A . n A 1 33 SER 33 40 40 SER SER A . n A 1 34 LYS 34 41 41 LYS LYS A . n A 1 35 SER 35 42 42 SER SER A . n A 1 36 THR 36 43 43 THR THR A . n A 1 37 GLY 37 44 44 GLY GLY A . n A 1 38 PHE 38 45 45 PHE PHE A . n A 1 39 LEU 39 46 46 LEU LEU A . n A 1 40 ARG 40 47 47 ARG ARG A . n A 1 41 ASP 41 48 48 ASP ASP A . n A 1 42 ASP 42 49 49 ASP ASP A . n A 1 43 ALA 43 50 50 ALA ALA A . n A 1 44 GLU 44 51 51 GLU GLU A . n A 1 45 ARG 45 52 52 ARG ARG A . n A 1 46 LEU 46 53 53 LEU LEU A . n A 1 47 ALA 47 54 54 ALA ALA A . n A 1 48 ALA 48 55 55 ALA ALA A . n A 1 49 THR 49 56 56 THR THR A . n A 1 50 ALA 50 57 57 ALA ALA A . n A 1 51 SER 51 58 58 SER SER A . n A 1 52 GLY 52 59 59 GLY GLY A . n A 1 53 LEU 53 60 60 LEU LEU A . n A 1 54 MSE 54 61 61 MSE MSE A . n A 1 55 SER 55 62 62 SER SER A . n A 1 56 LEU 56 63 63 LEU LEU A . n A 1 57 SER 57 64 ? ? ? A . n A 1 58 LYS 58 65 ? ? ? A . n A 1 59 GLY 59 66 ? ? ? A . n A 1 60 VAL 60 67 ? ? ? A . n A 1 61 SER 61 68 ? ? ? A . n A 1 62 MSE 62 69 ? ? ? A . n A 1 63 ASP 63 70 ? ? ? A . n A 1 64 PHE 64 71 ? ? ? A . n A 1 65 ARG 65 72 ? ? ? A . n A 1 66 ARG 66 73 ? ? ? A . n A 1 67 GLY 67 74 ? ? ? A . n A 1 68 PRO 68 75 ? ? ? A . n A 1 69 VAL 69 76 ? ? ? A . n A 1 70 ARG 70 77 77 ARG ARG A . n A 1 71 GLN 71 78 78 GLN GLN A . n A 1 72 ALA 72 79 79 ALA ALA A . n A 1 73 LEU 73 80 80 LEU LEU A . n A 1 74 ILE 74 81 81 ILE ILE A . n A 1 75 GLU 75 82 82 GLU GLU A . n A 1 76 MSE 76 83 83 MSE MSE A . n A 1 77 GLY 77 84 84 GLY GLY A . n A 1 78 LYS 78 85 85 LYS LYS A . n A 1 79 GLY 79 86 86 GLY GLY A . n A 1 80 TYR 80 87 87 TYR TYR A . n A 1 81 LEU 81 88 88 LEU LEU A . n A 1 82 ILE 82 89 89 ILE ILE A . n A 1 83 LEU 83 90 90 LEU LEU A . n A 1 84 THR 84 91 91 THR THR A . n A 1 85 ALA 85 92 92 ALA ALA A . n A 1 86 ALA 86 93 93 ALA ALA A . n A 1 87 GLY 87 94 94 GLY GLY A . n A 1 88 PRO 88 95 95 PRO PRO A . n A 1 89 GLY 89 96 96 GLY GLY A . n A 1 90 ALA 90 97 97 ALA ALA A . n A 1 91 HIS 91 98 98 HIS HIS A . n A 1 92 LEU 92 99 99 LEU LEU A . n A 1 93 VAL 93 100 100 VAL VAL A . n A 1 94 VAL 94 101 101 VAL VAL A . n A 1 95 LEU 95 102 102 LEU LEU A . n A 1 96 THR 96 103 103 THR THR A . n A 1 97 ARG 97 104 104 ARG ARG A . n A 1 98 GLN 98 105 105 GLN GLN A . n A 1 99 GLY 99 106 106 GLY GLY A . n A 1 100 ALA 100 107 107 ALA ALA A . n A 1 101 ASP 101 108 108 ASP ASP A . n A 1 102 VAL 102 109 109 VAL VAL A . n A 1 103 GLY 103 110 110 GLY GLY A . n A 1 104 VAL 104 111 111 VAL VAL A . n A 1 105 VAL 105 112 112 VAL VAL A . n A 1 106 ALA 106 113 113 ALA ALA A . n A 1 107 TYR 107 114 114 TYR TYR A . n A 1 108 GLN 108 115 115 GLN GLN A . n A 1 109 MSE 109 116 116 MSE MSE A . n A 1 110 ASN 110 117 117 ASN ASN A . n A 1 111 MSE 111 118 118 MSE MSE A . n A 1 112 LEU 112 119 119 LEU LEU A . n A 1 113 VAL 113 120 120 VAL VAL A . n A 1 114 LYS 114 121 121 LYS LYS A . n A 1 115 LYS 115 122 122 LYS LYS A . n A 1 116 ILE 116 123 123 ILE ILE A . n A 1 117 GLY 117 124 ? ? ? A . n A 1 118 GLU 118 125 ? ? ? A . n A 1 119 HIS 119 126 ? ? ? A . n A 1 120 LEU 120 127 ? ? ? A . n A 1 121 SER 121 128 ? ? ? A . n A 1 122 ALA 122 129 ? ? ? A . n A 1 123 PRO 123 130 ? ? ? A . n A 1 124 PRO 124 131 ? ? ? A . n A 1 125 ARG 125 132 ? ? ? A . n A 1 126 GLY 126 133 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 1 1 HOH HOH A . B 2 HOH 2 2 2 HOH HOH A . B 2 HOH 3 3 3 HOH HOH A . B 2 HOH 4 4 4 HOH HOH A . B 2 HOH 5 5 5 HOH HOH A . B 2 HOH 6 6 6 HOH HOH A . B 2 HOH 7 7 7 HOH HOH A . B 2 HOH 8 134 8 HOH HOH A . B 2 HOH 9 135 9 HOH HOH A . B 2 HOH 10 136 10 HOH HOH A . B 2 HOH 11 137 11 HOH HOH A . B 2 HOH 12 138 12 HOH HOH A . B 2 HOH 13 139 13 HOH HOH A . B 2 HOH 14 140 14 HOH HOH A . B 2 HOH 15 141 15 HOH HOH A . B 2 HOH 16 142 16 HOH HOH A . B 2 HOH 17 143 17 HOH HOH A . B 2 HOH 18 144 18 HOH HOH A . B 2 HOH 19 145 19 HOH HOH A . B 2 HOH 20 146 20 HOH HOH A . B 2 HOH 21 147 21 HOH HOH A . B 2 HOH 22 148 22 HOH HOH A . B 2 HOH 23 149 23 HOH HOH A . B 2 HOH 24 150 24 HOH HOH A . B 2 HOH 25 151 25 HOH HOH A . B 2 HOH 26 152 26 HOH HOH A . B 2 HOH 27 153 27 HOH HOH A . B 2 HOH 28 154 28 HOH HOH A . B 2 HOH 29 155 29 HOH HOH A . B 2 HOH 30 156 30 HOH HOH A . B 2 HOH 31 157 31 HOH HOH A . B 2 HOH 32 158 32 HOH HOH A . B 2 HOH 33 159 33 HOH HOH A . B 2 HOH 34 160 34 HOH HOH A . B 2 HOH 35 161 35 HOH HOH A . B 2 HOH 36 162 36 HOH HOH A . B 2 HOH 37 163 37 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 11 ? CG ? A GLN 4 CG 2 1 Y 1 A GLN 11 ? CD ? A GLN 4 CD 3 1 Y 1 A GLN 11 ? OE1 ? A GLN 4 OE1 4 1 Y 1 A GLN 11 ? NE2 ? A GLN 4 NE2 5 1 Y 1 A GLU 34 ? CG ? A GLU 27 CG 6 1 Y 1 A GLU 34 ? CD ? A GLU 27 CD 7 1 Y 1 A GLU 34 ? OE1 ? A GLU 27 OE1 8 1 Y 1 A GLU 34 ? OE2 ? A GLU 27 OE2 9 1 Y 1 A ASP 35 ? CG ? A ASP 28 CG 10 1 Y 1 A ASP 35 ? OD1 ? A ASP 28 OD1 11 1 Y 1 A ASP 35 ? OD2 ? A ASP 28 OD2 12 1 Y 1 A ASP 48 ? CG ? A ASP 41 CG 13 1 Y 1 A ASP 48 ? OD1 ? A ASP 41 OD1 14 1 Y 1 A ASP 48 ? OD2 ? A ASP 41 OD2 15 1 Y 1 A LYS 85 ? CG ? A LYS 78 CG 16 1 Y 1 A LYS 85 ? CD ? A LYS 78 CD 17 1 Y 1 A LYS 85 ? CE ? A LYS 78 CE 18 1 Y 1 A LYS 85 ? NZ ? A LYS 78 NZ 19 1 Y 1 A ARG 104 ? CG ? A ARG 97 CG 20 1 Y 1 A ARG 104 ? CD ? A ARG 97 CD 21 1 Y 1 A ARG 104 ? NE ? A ARG 97 NE 22 1 Y 1 A ARG 104 ? CZ ? A ARG 97 CZ 23 1 Y 1 A ARG 104 ? NH1 ? A ARG 97 NH1 24 1 Y 1 A ARG 104 ? NH2 ? A ARG 97 NH2 25 1 Y 1 A GLN 105 ? CG ? A GLN 98 CG 26 1 Y 1 A GLN 105 ? CD ? A GLN 98 CD 27 1 Y 1 A GLN 105 ? OE1 ? A GLN 98 OE1 28 1 Y 1 A GLN 105 ? NE2 ? A GLN 98 NE2 29 1 Y 1 A LYS 122 ? CG ? A LYS 115 CG 30 1 Y 1 A LYS 122 ? CD ? A LYS 115 CD 31 1 Y 1 A LYS 122 ? CE ? A LYS 115 CE 32 1 Y 1 A LYS 122 ? NZ ? A LYS 115 NZ # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 REFMAC refmac_5.5.0102 24/04/2001 program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 3 PDB_EXTRACT 3.004 'September 10, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 4 SBC-Collect . ? ? ? ? 'data collection' ? ? ? 5 HKL-3000 . ? ? ? ? 'data reduction' ? ? ? 6 HKL-3000 . ? ? ? ? 'data scaling' ? ? ? 7 HKL-3000 . ? ? ? ? phasing ? ? ? 8 SHELX . ? ? ? ? phasing ? ? ? 9 MLPHARE . ? ? ? ? phasing ? ? ? 10 DM . ? ? ? ? phasing ? ? ? 11 ARP/wARP . ? ? ? ? 'model building' ? ? ? 12 Coot . ? ? ? ? 'model building' ? ? ? 13 # _cell.entry_id 3LEQ _cell.length_a 89.466 _cell.length_b 29.824 _cell.length_c 40.752 _cell.angle_alpha 90.00 _cell.angle_beta 104.89 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3LEQ _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3LEQ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.94 _exptl_crystal.density_percent_sol 36.52 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '2M Ammonium phosphate, 0.1M Tris pH 8.5, vapor diffusion, temperature 289K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2009-10-17 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator 'Double crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9794 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9794 # _reflns.entry_id 3LEQ _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 1.850 _reflns.number_obs 8867 _reflns.number_all ? _reflns.percent_possible_obs 98.500 _reflns.pdbx_Rmerge_I_obs 0.083 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 16.000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.600 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.85 1.92 99.00 0.561 ? ? 3.70 ? ? ? ? ? ? 1 1 1.92 1.99 98.60 0.394 ? ? 3.60 ? ? ? ? ? ? 2 1 1.99 2.08 99.90 0.249 ? ? 3.60 ? ? ? ? ? ? 3 1 2.08 2.19 98.90 0.172 ? ? 3.60 ? ? ? ? ? ? 4 1 2.19 2.33 99.40 0.123 ? ? 3.60 ? ? ? ? ? ? 5 1 2.33 2.51 99.60 0.113 ? ? 3.60 ? ? ? ? ? ? 6 1 2.51 2.76 99.70 0.102 ? ? 3.60 ? ? ? ? ? ? 7 1 2.76 3.16 99.90 0.082 ? ? 3.60 ? ? ? ? ? ? 8 1 3.16 3.99 99.40 0.062 ? ? 3.40 ? ? ? ? ? ? 9 1 3.99 50.00 91.50 0.063 ? ? 3.30 ? ? ? ? ? ? 10 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3LEQ _refine.ls_number_reflns_obs 8446 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 43.23 _refine.ls_d_res_high 1.85 _refine.ls_percent_reflns_obs 98.16 _refine.ls_R_factor_obs 0.21693 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.21592 _refine.ls_R_factor_R_free 0.23588 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.7 _refine.ls_number_reflns_R_free 416 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.941 _refine.correlation_coeff_Fo_to_Fc_free 0.941 _refine.B_iso_mean 10.915 _refine.aniso_B[1][1] -0.20 _refine.aniso_B[2][2] -0.24 _refine.aniso_B[3][3] -0.30 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -1.44 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. this was a in situ proteolysis crystal structure so there is higher than usual degree of disorder. ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.156 _refine.pdbx_overall_ESU_R_Free 0.135 _refine.overall_SU_ML 0.103 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 7.664 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 722 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 37 _refine_hist.number_atoms_total 759 _refine_hist.d_res_high 1.85 _refine_hist.d_res_low 43.23 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.011 0.022 ? 744 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.238 1.993 ? 1015 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.703 5.000 ? 106 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 26.571 23.636 ? 22 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 18.141 15.000 ? 123 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 18.198 15.000 ? 4 'X-RAY DIFFRACTION' ? r_chiral_restr 0.082 0.200 ? 135 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 525 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.526 1.500 ? 508 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.901 2.000 ? 803 'X-RAY DIFFRACTION' ? r_scbond_it 1.884 3.000 ? 236 'X-RAY DIFFRACTION' ? r_scangle_it 2.646 4.500 ? 209 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.854 _refine_ls_shell.d_res_low 1.902 _refine_ls_shell.number_reflns_R_work 574 _refine_ls_shell.R_factor_R_work 0.235 _refine_ls_shell.percent_reflns_obs 93.60 _refine_ls_shell.R_factor_R_free 0.342 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 26 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3LEQ _struct.title 'The Crystal Structure of the Roadblock/LC7 domain from Streptomyces avermitillis to 1.85A' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3LEQ _struct_keywords.pdbx_keywords 'structure genomics, unknown function' _struct_keywords.text ;PSI, MCSG, Structural Genomics, Midwest Center for Structural Genomics, Protein Structure Initiative, structure genomics, unknown function ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q82L23_STRAW _struct_ref.pdbx_db_accession Q82L23 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;THSQLDQLLTGLVDRVAEVDHAVVLSEDGLVVSKSTGFLRDDAERLAATASGLMSLSKGVSMDFRRGPVRQALIEMGKGY LILTAAGPGAHLVVLTRQGADVGVVAYQMNMLVKKIGEHLSAPPRG ; _struct_ref.pdbx_align_begin 8 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3LEQ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 126 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q82L23 _struct_ref_seq.db_align_beg 8 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 133 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 133 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 1100 ? 2 MORE -9 ? 2 'SSA (A^2)' 10180 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B 2 1,2 A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1.0000000000 0.0000000000 0.0000000000 78.9941979863 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 39.3835862586 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 3 ? VAL A 16 ? SER A 10 VAL A 23 1 ? 14 HELX_P HELX_P2 2 LEU A 39 ? LEU A 56 ? LEU A 46 LEU A 63 1 ? 18 HELX_P HELX_P3 3 ASP A 101 ? ILE A 116 ? ASP A 108 ILE A 123 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A LEU 53 C ? ? ? 1_555 A MSE 54 N ? ? A LEU 60 A MSE 61 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale2 covale both ? A MSE 54 C ? ? ? 1_555 A SER 55 N ? ? A MSE 61 A SER 62 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale3 covale both ? A GLU 75 C ? ? ? 1_555 A MSE 76 N ? ? A GLU 82 A MSE 83 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale4 covale both ? A MSE 76 C ? ? ? 1_555 A GLY 77 N ? ? A MSE 83 A GLY 84 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale5 covale both ? A GLN 108 C ? ? ? 1_555 A MSE 109 N ? ? A GLN 115 A MSE 116 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale6 covale both ? A MSE 109 C ? ? ? 1_555 A ASN 110 N ? ? A MSE 116 A ASN 117 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale7 covale both ? A ASN 110 C ? ? ? 1_555 A MSE 111 N ? ? A ASN 117 A MSE 118 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale8 covale both ? A MSE 111 C ? ? ? 1_555 A LEU 112 N ? ? A MSE 118 A LEU 119 1_555 ? ? ? ? ? ? ? 1.330 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 MSE A 54 ? . . . . MSE A 61 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 2 MSE A 76 ? . . . . MSE A 83 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 3 MSE A 109 ? . . . . MSE A 116 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 4 MSE A 111 ? . . . . MSE A 118 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 31 ? LYS A 34 ? VAL A 38 LYS A 41 A 2 VAL A 19 ? SER A 26 ? VAL A 26 SER A 33 A 3 ALA A 90 ? THR A 96 ? ALA A 97 THR A 103 A 4 TYR A 80 ? ALA A 85 ? TYR A 87 ALA A 92 A 5 GLN A 71 ? GLU A 75 ? GLN A 78 GLU A 82 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 32 ? O VAL A 39 N VAL A 24 ? N VAL A 31 A 2 3 N VAL A 23 ? N VAL A 30 O VAL A 93 ? O VAL A 100 A 3 4 O VAL A 94 ? O VAL A 101 N ILE A 82 ? N ILE A 89 A 4 5 O LEU A 83 ? O LEU A 90 N ALA A 72 ? N ALA A 79 # _pdbx_entry_details.entry_id 3LEQ _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'THIS WAS A IN SITU PROTEOLYSIS CRYSTAL STRUCTURE' _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 54 A MSE 61 ? MET SELENOMETHIONINE 2 A MSE 76 A MSE 83 ? MET SELENOMETHIONINE 3 A MSE 109 A MSE 116 ? MET SELENOMETHIONINE 4 A MSE 111 A MSE 118 ? MET SELENOMETHIONINE # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 29.9031 21.6866 -5.6108 0.2145 0.2976 0.1886 0.0339 -0.0152 -0.0385 23.4351 19.3842 30.5076 1.9727 -1.4875 -12.4230 0.6009 1.1023 0.5116 -0.4387 -0.2142 0.3842 -0.1854 -1.1861 -0.3867 'X-RAY DIFFRACTION' 2 ? refined 29.4771 17.6544 0.8864 0.1644 0.1400 0.2016 -0.0269 -0.0526 -0.0451 10.8820 14.9256 7.7622 4.8145 3.0628 -4.7345 -0.2188 0.0220 -0.2572 -0.4798 0.1343 -0.3201 0.4681 -0.5882 0.0845 'X-RAY DIFFRACTION' 3 ? refined 25.2301 15.6897 7.6268 0.1332 0.3344 0.2377 -0.1161 -0.0340 -0.0399 9.2301 12.0695 7.6471 0.2525 -4.5263 -1.4926 0.2578 -0.0122 -0.2511 0.0484 -0.4276 0.8868 0.5443 -0.8455 0.1698 'X-RAY DIFFRACTION' 4 ? refined 37.6038 27.5180 4.3064 0.1984 0.0872 0.1527 0.0127 0.0125 0.0077 15.8973 13.2981 11.0691 2.9391 -2.7978 0.3594 0.1193 0.1039 0.7056 -0.3696 -0.0075 -0.6633 -0.6704 0.2796 -0.1117 'X-RAY DIFFRACTION' 5 ? refined 33.3967 28.5436 1.2575 0.2631 0.1236 0.1484 0.0444 -0.0311 0.0116 28.9483 14.4734 7.6029 13.7521 2.4244 1.0290 -0.3350 1.1251 0.8251 -1.0515 0.3918 0.1780 -0.5212 -0.2396 -0.0568 'X-RAY DIFFRACTION' 6 ? refined 25.3335 29.9475 4.4777 0.5975 0.6701 0.7770 0.4037 -0.5663 -0.1750 2.6357 20.8685 10.3871 -4.1656 -2.5100 0.6840 -0.4008 0.7079 0.2844 -0.3504 -0.2383 1.0839 -2.2983 -3.1866 0.6391 'X-RAY DIFFRACTION' 7 ? refined 33.6033 32.1137 11.4692 0.2339 0.0516 0.1786 0.0208 0.0045 -0.0032 21.9773 9.3884 20.3295 1.6987 15.0221 -1.7333 -0.0625 0.0526 0.6436 0.1823 0.1870 0.4425 -1.2352 0.2291 -0.1245 'X-RAY DIFFRACTION' 8 ? refined 43.6664 28.4646 15.2790 0.3231 0.6410 0.6769 -0.2022 0.0785 0.0767 3.7226 14.7932 -4.4164 -12.1933 -2.9836 2.2353 0.3914 0.5533 0.1372 -0.6755 -0.8572 -0.8060 -0.0952 0.2741 0.4659 'X-RAY DIFFRACTION' 9 ? refined 35.9939 20.5714 19.1076 0.1347 0.3758 0.0834 -0.0610 -0.0323 -0.0249 86.0892 8.0237 49.5746 8.3119 -46.5620 -5.2248 -0.1629 -1.5799 0.3807 0.1314 -0.3910 0.4746 0.5898 0.0418 0.5539 'X-RAY DIFFRACTION' 10 ? refined 30.8203 20.4085 17.9418 0.1322 0.2392 0.1571 -0.0615 0.0583 -0.0565 32.3491 13.1238 24.5180 7.2315 -14.1934 -4.1657 0.3658 -1.2588 0.5623 0.9878 -0.4170 1.0522 0.5428 -0.8994 0.0511 'X-RAY DIFFRACTION' 11 ? refined 43.1400 21.8470 5.7247 0.1490 0.2104 0.2433 -0.0520 0.0865 -0.0027 8.9213 1.9515 18.4146 2.2523 -13.2286 -5.3044 -0.1109 -0.7537 0.2899 -0.4082 0.0352 -0.2457 0.3883 0.9090 0.0757 'X-RAY DIFFRACTION' 12 ? refined 33.0836 21.2877 10.3790 0.0580 0.0805 0.0976 0.0113 -0.0090 -0.0130 19.5980 6.1563 16.4645 2.1806 -12.1117 -0.4541 -0.0650 -0.5255 -0.0452 -0.0823 -0.1289 0.2077 0.0382 0.0628 0.1939 'X-RAY DIFFRACTION' 13 ? refined 29.7887 11.6376 16.8274 0.3428 0.5040 0.2366 -0.0471 0.0904 0.1188 14.6222 28.1098 33.7681 -18.3279 -22.4490 18.0638 -1.1548 -0.8267 -0.6849 1.5878 0.8765 1.1752 1.1936 0.1771 0.2783 'X-RAY DIFFRACTION' 14 ? refined 35.2142 11.1669 8.7041 0.1375 0.1018 0.1619 -0.0106 0.0249 -0.0007 3.5483 14.1178 17.1182 -5.0071 -4.3555 1.0572 -0.0575 -0.1639 0.2365 0.1824 0.1558 -0.1469 0.0869 -0.0232 -0.0983 'X-RAY DIFFRACTION' 15 ? refined 38.2828 13.3100 1.1439 0.2249 0.1202 0.2238 -0.0002 0.1027 -0.0422 19.8002 24.9808 33.5270 9.5151 -5.8822 -1.3152 -0.2627 0.1413 -0.0813 -1.8095 0.0644 -1.2253 0.0592 0.5464 0.1983 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 9 ? ? A 14 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 15 ? ? A 19 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 20 ? ? A 28 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 29 ? ? A 35 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 36 ? ? A 42 ? ? ? ? 'X-RAY DIFFRACTION' 6 6 A 43 ? ? A 50 ? ? ? ? 'X-RAY DIFFRACTION' 7 7 A 51 ? ? A 59 ? ? ? ? 'X-RAY DIFFRACTION' 8 8 A 60 ? ? A 77 ? ? ? ? 'X-RAY DIFFRACTION' 9 9 A 78 ? ? A 83 ? ? ? ? 'X-RAY DIFFRACTION' 10 10 A 84 ? ? A 89 ? ? ? ? 'X-RAY DIFFRACTION' 11 11 A 90 ? ? A 97 ? ? ? ? 'X-RAY DIFFRACTION' 12 12 A 98 ? ? A 104 ? ? ? ? 'X-RAY DIFFRACTION' 13 13 A 105 ? ? A 111 ? ? ? ? 'X-RAY DIFFRACTION' 14 14 A 112 ? ? A 117 ? ? ? ? 'X-RAY DIFFRACTION' 15 15 A 118 ? ? A 123 ? ? ? ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A THR 8 ? A THR 1 2 1 Y 1 A SER 64 ? A SER 57 3 1 Y 1 A LYS 65 ? A LYS 58 4 1 Y 1 A GLY 66 ? A GLY 59 5 1 Y 1 A VAL 67 ? A VAL 60 6 1 Y 1 A SER 68 ? A SER 61 7 1 Y 1 A MSE 69 ? A MSE 62 8 1 Y 1 A ASP 70 ? A ASP 63 9 1 Y 1 A PHE 71 ? A PHE 64 10 1 Y 1 A ARG 72 ? A ARG 65 11 1 Y 1 A ARG 73 ? A ARG 66 12 1 Y 1 A GLY 74 ? A GLY 67 13 1 Y 1 A PRO 75 ? A PRO 68 14 1 Y 1 A VAL 76 ? A VAL 69 15 1 Y 1 A GLY 124 ? A GLY 117 16 1 Y 1 A GLU 125 ? A GLU 118 17 1 Y 1 A HIS 126 ? A HIS 119 18 1 Y 1 A LEU 127 ? A LEU 120 19 1 Y 1 A SER 128 ? A SER 121 20 1 Y 1 A ALA 129 ? A ALA 122 21 1 Y 1 A PRO 130 ? A PRO 123 22 1 Y 1 A PRO 131 ? A PRO 124 23 1 Y 1 A ARG 132 ? A ARG 125 24 1 Y 1 A GLY 133 ? A GLY 126 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MSE N N N N 216 MSE CA C N S 217 MSE C C N N 218 MSE O O N N 219 MSE OXT O N N 220 MSE CB C N N 221 MSE CG C N N 222 MSE SE SE N N 223 MSE CE C N N 224 MSE H H N N 225 MSE H2 H N N 226 MSE HA H N N 227 MSE HXT H N N 228 MSE HB2 H N N 229 MSE HB3 H N N 230 MSE HG2 H N N 231 MSE HG3 H N N 232 MSE HE1 H N N 233 MSE HE2 H N N 234 MSE HE3 H N N 235 PHE N N N N 236 PHE CA C N S 237 PHE C C N N 238 PHE O O N N 239 PHE CB C N N 240 PHE CG C Y N 241 PHE CD1 C Y N 242 PHE CD2 C Y N 243 PHE CE1 C Y N 244 PHE CE2 C Y N 245 PHE CZ C Y N 246 PHE OXT O N N 247 PHE H H N N 248 PHE H2 H N N 249 PHE HA H N N 250 PHE HB2 H N N 251 PHE HB3 H N N 252 PHE HD1 H N N 253 PHE HD2 H N N 254 PHE HE1 H N N 255 PHE HE2 H N N 256 PHE HZ H N N 257 PHE HXT H N N 258 PRO N N N N 259 PRO CA C N S 260 PRO C C N N 261 PRO O O N N 262 PRO CB C N N 263 PRO CG C N N 264 PRO CD C N N 265 PRO OXT O N N 266 PRO H H N N 267 PRO HA H N N 268 PRO HB2 H N N 269 PRO HB3 H N N 270 PRO HG2 H N N 271 PRO HG3 H N N 272 PRO HD2 H N N 273 PRO HD3 H N N 274 PRO HXT H N N 275 SER N N N N 276 SER CA C N S 277 SER C C N N 278 SER O O N N 279 SER CB C N N 280 SER OG O N N 281 SER OXT O N N 282 SER H H N N 283 SER H2 H N N 284 SER HA H N N 285 SER HB2 H N N 286 SER HB3 H N N 287 SER HG H N N 288 SER HXT H N N 289 THR N N N N 290 THR CA C N S 291 THR C C N N 292 THR O O N N 293 THR CB C N R 294 THR OG1 O N N 295 THR CG2 C N N 296 THR OXT O N N 297 THR H H N N 298 THR H2 H N N 299 THR HA H N N 300 THR HB H N N 301 THR HG1 H N N 302 THR HG21 H N N 303 THR HG22 H N N 304 THR HG23 H N N 305 THR HXT H N N 306 TYR N N N N 307 TYR CA C N S 308 TYR C C N N 309 TYR O O N N 310 TYR CB C N N 311 TYR CG C Y N 312 TYR CD1 C Y N 313 TYR CD2 C Y N 314 TYR CE1 C Y N 315 TYR CE2 C Y N 316 TYR CZ C Y N 317 TYR OH O N N 318 TYR OXT O N N 319 TYR H H N N 320 TYR H2 H N N 321 TYR HA H N N 322 TYR HB2 H N N 323 TYR HB3 H N N 324 TYR HD1 H N N 325 TYR HD2 H N N 326 TYR HE1 H N N 327 TYR HE2 H N N 328 TYR HH H N N 329 TYR HXT H N N 330 VAL N N N N 331 VAL CA C N S 332 VAL C C N N 333 VAL O O N N 334 VAL CB C N N 335 VAL CG1 C N N 336 VAL CG2 C N N 337 VAL OXT O N N 338 VAL H H N N 339 VAL H2 H N N 340 VAL HA H N N 341 VAL HB H N N 342 VAL HG11 H N N 343 VAL HG12 H N N 344 VAL HG13 H N N 345 VAL HG21 H N N 346 VAL HG22 H N N 347 VAL HG23 H N N 348 VAL HXT H N N 349 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MSE N CA sing N N 205 MSE N H sing N N 206 MSE N H2 sing N N 207 MSE CA C sing N N 208 MSE CA CB sing N N 209 MSE CA HA sing N N 210 MSE C O doub N N 211 MSE C OXT sing N N 212 MSE OXT HXT sing N N 213 MSE CB CG sing N N 214 MSE CB HB2 sing N N 215 MSE CB HB3 sing N N 216 MSE CG SE sing N N 217 MSE CG HG2 sing N N 218 MSE CG HG3 sing N N 219 MSE SE CE sing N N 220 MSE CE HE1 sing N N 221 MSE CE HE2 sing N N 222 MSE CE HE3 sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 THR N CA sing N N 277 THR N H sing N N 278 THR N H2 sing N N 279 THR CA C sing N N 280 THR CA CB sing N N 281 THR CA HA sing N N 282 THR C O doub N N 283 THR C OXT sing N N 284 THR CB OG1 sing N N 285 THR CB CG2 sing N N 286 THR CB HB sing N N 287 THR OG1 HG1 sing N N 288 THR CG2 HG21 sing N N 289 THR CG2 HG22 sing N N 290 THR CG2 HG23 sing N N 291 THR OXT HXT sing N N 292 TYR N CA sing N N 293 TYR N H sing N N 294 TYR N H2 sing N N 295 TYR CA C sing N N 296 TYR CA CB sing N N 297 TYR CA HA sing N N 298 TYR C O doub N N 299 TYR C OXT sing N N 300 TYR CB CG sing N N 301 TYR CB HB2 sing N N 302 TYR CB HB3 sing N N 303 TYR CG CD1 doub Y N 304 TYR CG CD2 sing Y N 305 TYR CD1 CE1 sing Y N 306 TYR CD1 HD1 sing N N 307 TYR CD2 CE2 doub Y N 308 TYR CD2 HD2 sing N N 309 TYR CE1 CZ doub Y N 310 TYR CE1 HE1 sing N N 311 TYR CE2 CZ sing Y N 312 TYR CE2 HE2 sing N N 313 TYR CZ OH sing N N 314 TYR OH HH sing N N 315 TYR OXT HXT sing N N 316 VAL N CA sing N N 317 VAL N H sing N N 318 VAL N H2 sing N N 319 VAL CA C sing N N 320 VAL CA CB sing N N 321 VAL CA HA sing N N 322 VAL C O doub N N 323 VAL C OXT sing N N 324 VAL CB CG1 sing N N 325 VAL CB CG2 sing N N 326 VAL CB HB sing N N 327 VAL CG1 HG11 sing N N 328 VAL CG1 HG12 sing N N 329 VAL CG1 HG13 sing N N 330 VAL CG2 HG21 sing N N 331 VAL CG2 HG22 sing N N 332 VAL CG2 HG23 sing N N 333 VAL OXT HXT sing N N 334 # _atom_sites.entry_id 3LEQ _atom_sites.fract_transf_matrix[1][1] 0.011177 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002972 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.033530 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.025391 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O SE # loop_