data_3LF4 # _entry.id 3LF4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3LF4 RCSB RCSB057199 WWPDB D_1000057199 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3LF3 _pdbx_database_related.details 'Crystal Structure of Fast Fluorescent Timer Fast-FT' _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3LF4 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-01-15 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pletnev, S.' 1 'Dauter, Z.' 2 # _citation.id primary _citation.title 'Understanding blue-to-red conversion in monomeric fluorescent timers and hydrolytic degradation of their chromophores' _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_volume 132 _citation.page_first 2243 _citation.page_last 2253 _citation.year 2010 _citation.journal_id_ASTM JACSAT _citation.country US _citation.journal_id_ISSN 0002-7863 _citation.journal_id_CSD 0004 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20121102 _citation.pdbx_database_id_DOI 10.1021/ja908418r # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Pletnev, S.' 1 primary 'Subach, F.V.' 2 primary 'Dauter, Z.' 3 primary 'Wlodawer, A.' 4 primary 'Verkhusha, V.V.' 5 # _cell.entry_id 3LF4 _cell.length_a 107.368 _cell.length_b 42.344 _cell.length_c 84.964 _cell.angle_alpha 90.00 _cell.angle_beta 127.06 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3LF4 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Fluorescent Timer Precursor Blue102' 7433.428 1 ? ? ? ? 2 polymer man 'Fluorescent Timer Precursor Blue102' 18904.221 1 ? ? ? ? 3 water nat water 18.015 278 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes 'EEDNMAIIKEFMRFKVHMEGSVNGHEFEIEGEGEGRPYEGTQTAKLKVTKGGPLPFAWDILSPQF(LEN)' EEDNMAIIKEFMRFKVHMEGSVNGHEFEIEGEGEGRPYEGTQTAKLKVTKGGPLPFAWDILSPQFL A ? 2 'polypeptide(L)' no yes ;(0YG)SRAYVKHPADIPDYWKLSFPEGFKWERVMNFEDGGVVTVTQDSSLQDGEFIYKVKLRGTNFPSDGPVMQKKTMGW EAISERMYPEDGALKGEIKQRLKLKDGGHYDAEVKTTYKAKKPVQLPGAYNVNIKLDITSHNEDYTIVEQYERAEGRHST GGMDELYK ; ;YGSRAYVKHPADIPDYWKLSFPEGFKWERVMNFEDGGVVTVTQDSSLQDGEFIYKVKLRGTNFPSDGPVMQKKTMGWEAI SERMYPEDGALKGEIKQRLKLKDGGHYDAEVKTTYKAKKPVQLPGAYNVNIKLDITSHNEDYTIVEQYERAEGRHSTGGM DELYK ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 GLU n 1 3 ASP n 1 4 ASN n 1 5 MET n 1 6 ALA n 1 7 ILE n 1 8 ILE n 1 9 LYS n 1 10 GLU n 1 11 PHE n 1 12 MET n 1 13 ARG n 1 14 PHE n 1 15 LYS n 1 16 VAL n 1 17 HIS n 1 18 MET n 1 19 GLU n 1 20 GLY n 1 21 SER n 1 22 VAL n 1 23 ASN n 1 24 GLY n 1 25 HIS n 1 26 GLU n 1 27 PHE n 1 28 GLU n 1 29 ILE n 1 30 GLU n 1 31 GLY n 1 32 GLU n 1 33 GLY n 1 34 GLU n 1 35 GLY n 1 36 ARG n 1 37 PRO n 1 38 TYR n 1 39 GLU n 1 40 GLY n 1 41 THR n 1 42 GLN n 1 43 THR n 1 44 ALA n 1 45 LYS n 1 46 LEU n 1 47 LYS n 1 48 VAL n 1 49 THR n 1 50 LYS n 1 51 GLY n 1 52 GLY n 1 53 PRO n 1 54 LEU n 1 55 PRO n 1 56 PHE n 1 57 ALA n 1 58 TRP n 1 59 ASP n 1 60 ILE n 1 61 LEU n 1 62 SER n 1 63 PRO n 1 64 GLN n 1 65 PHE n 1 66 LEN n 2 1 0YG n 2 2 SER n 2 3 ARG n 2 4 ALA n 2 5 TYR n 2 6 VAL n 2 7 LYS n 2 8 HIS n 2 9 PRO n 2 10 ALA n 2 11 ASP n 2 12 ILE n 2 13 PRO n 2 14 ASP n 2 15 TYR n 2 16 TRP n 2 17 LYS n 2 18 LEU n 2 19 SER n 2 20 PHE n 2 21 PRO n 2 22 GLU n 2 23 GLY n 2 24 PHE n 2 25 LYS n 2 26 TRP n 2 27 GLU n 2 28 ARG n 2 29 VAL n 2 30 MET n 2 31 ASN n 2 32 PHE n 2 33 GLU n 2 34 ASP n 2 35 GLY n 2 36 GLY n 2 37 VAL n 2 38 VAL n 2 39 THR n 2 40 VAL n 2 41 THR n 2 42 GLN n 2 43 ASP n 2 44 SER n 2 45 SER n 2 46 LEU n 2 47 GLN n 2 48 ASP n 2 49 GLY n 2 50 GLU n 2 51 PHE n 2 52 ILE n 2 53 TYR n 2 54 LYS n 2 55 VAL n 2 56 LYS n 2 57 LEU n 2 58 ARG n 2 59 GLY n 2 60 THR n 2 61 ASN n 2 62 PHE n 2 63 PRO n 2 64 SER n 2 65 ASP n 2 66 GLY n 2 67 PRO n 2 68 VAL n 2 69 MET n 2 70 GLN n 2 71 LYS n 2 72 LYS n 2 73 THR n 2 74 MET n 2 75 GLY n 2 76 TRP n 2 77 GLU n 2 78 ALA n 2 79 ILE n 2 80 SER n 2 81 GLU n 2 82 ARG n 2 83 MET n 2 84 TYR n 2 85 PRO n 2 86 GLU n 2 87 ASP n 2 88 GLY n 2 89 ALA n 2 90 LEU n 2 91 LYS n 2 92 GLY n 2 93 GLU n 2 94 ILE n 2 95 LYS n 2 96 GLN n 2 97 ARG n 2 98 LEU n 2 99 LYS n 2 100 LEU n 2 101 LYS n 2 102 ASP n 2 103 GLY n 2 104 GLY n 2 105 HIS n 2 106 TYR n 2 107 ASP n 2 108 ALA n 2 109 GLU n 2 110 VAL n 2 111 LYS n 2 112 THR n 2 113 THR n 2 114 TYR n 2 115 LYS n 2 116 ALA n 2 117 LYS n 2 118 LYS n 2 119 PRO n 2 120 VAL n 2 121 GLN n 2 122 LEU n 2 123 PRO n 2 124 GLY n 2 125 ALA n 2 126 TYR n 2 127 ASN n 2 128 VAL n 2 129 ASN n 2 130 ILE n 2 131 LYS n 2 132 LEU n 2 133 ASP n 2 134 ILE n 2 135 THR n 2 136 SER n 2 137 HIS n 2 138 ASN n 2 139 GLU n 2 140 ASP n 2 141 TYR n 2 142 THR n 2 143 ILE n 2 144 VAL n 2 145 GLU n 2 146 GLN n 2 147 TYR n 2 148 GLU n 2 149 ARG n 2 150 ALA n 2 151 GLU n 2 152 GLY n 2 153 ARG n 2 154 HIS n 2 155 SER n 2 156 THR n 2 157 GLY n 2 158 GLY n 2 159 MET n 2 160 ASP n 2 161 GLU n 2 162 LEU n 2 163 TYR n 2 164 LYS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? ? ? ? ? ? ? ? ? ? 'Discosoma sp.' 86600 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? LMG194 ? ? ? ? ? ? ? pBAD/HisB plasmid ? ? ? ? ? 2 1 sample ? ? ? ? ? ? ? ? ? ? ? ? 'Discosoma sp.' 86600 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? LMG194 ? ? ? ? ? ? ? pBAD/HisB plasmid ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 PDB 3LF4 3LF4 1 ? ;EEDNMAIIKEFMRFKVHMEGSVNGHEFEIEGEGEGRPYEGTQTAKLKVTKGGPLPFAWDILSPQFEEDNMAIIKEFMRFK VHMEGSVNGHEFEIEGEGEGRPYEGTQTAKLKVTKGGPLPFAWDILSPQFX ; ? 2 PDB 3LF4 3LF4 2 ? ;YGSRAYVKHPADIPDYWKLSFPEGFKWERVMNFEDGGVVTVTQDSSLQDGEFIYKVKLRGTNFPSDGPVMQKKTMGWEAI SERMYPEDGALKGEIKQRLKLKDGGHYDAEVKTTYKAKKPVQLPGAYNVNIKLDITSHNEDYTIVEQYERAEGRHSTGGM DELYK ; ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3LF4 A 1 ? 66 ? 3LF4 1 ? 66 ? 1 66 2 2 3LF4 B 1 ? 164 ? 3LF4 67 ? 231 ? 67 231 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3LF4 0YG B 1 ? PDB 3LF4 TYR 67 CHROMOPHORE 67 1 1 3LF4 0YG B 1 ? PDB 3LF4 GLY 67 CHROMOPHORE 67 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 0YG 'L-peptide NH3 amino terminus' n 'N-[(2Z)-2-amino-3-(4-hydroxyphenyl)prop-2-enoyl]glycine' ? 'C11 H12 N2 O4' 236.224 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEN 'L-peptide COOH carboxy terminus' n 3-METHYLBUTAN-1-AMINE ? 'C5 H13 N' 87.163 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3LF4 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.92 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 57.89 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '0.1M Citric Acid, 1.0M LiCl, 20% w/v PEG 6000, pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2009 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_wavelength 1.0 _diffrn_source.pdbx_wavelength_list ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID # _reflns.entry_id 3LF4 _reflns.d_resolution_high 1.810 _reflns.d_resolution_low 30.000 _reflns.number_obs 27667 _reflns.pdbx_Rmerge_I_obs 0.063 _reflns.pdbx_netI_over_sigmaI 10.700 _reflns.pdbx_chi_squared 1.011 _reflns.pdbx_redundancy 4.000 _reflns.percent_possible_obs 98.100 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 1.81 1.87 ? ? ? 0.418 ? ? 0.850 3.20 ? 2400 85.80 ? 1 1.87 1.95 ? ? ? 0.279 ? ? 0.859 3.80 ? 2673 96.20 ? 2 1.95 2.04 ? ? ? 0.199 ? ? 0.951 4.00 ? 2784 99.50 ? 3 2.04 2.15 ? ? ? 0.150 ? ? 1.000 4.10 ? 2802 99.90 ? 4 2.15 2.28 ? ? ? 0.121 ? ? 1.016 4.20 ? 2793 100.00 ? 5 2.28 2.46 ? ? ? 0.099 ? ? 1.069 4.20 ? 2816 100.00 ? 6 2.46 2.70 ? ? ? 0.088 ? ? 1.079 4.20 ? 2808 100.00 ? 7 2.70 3.09 ? ? ? 0.060 ? ? 1.083 4.20 ? 2842 100.00 ? 8 3.09 3.90 ? ? ? 0.053 ? ? 1.073 4.20 ? 2833 100.00 ? 9 3.90 30.00 ? ? ? 0.037 ? ? 1.030 4.00 ? 2916 99.70 ? 10 # _refine.entry_id 3LF4 _refine.ls_d_res_high 1.808 _refine.ls_d_res_low 29.896 _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.110 _refine.ls_number_reflns_obs 27658 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details ? _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.215 _refine.ls_R_factor_R_work 0.213 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.257 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.040 _refine.ls_number_reflns_R_free 1117 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 28.475 _refine.solvent_model_param_bsol 64.814 _refine.solvent_model_param_ksol 0.378 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -2.815 _refine.aniso_B[2][2] 9.617 _refine.aniso_B[3][3] -6.802 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] -0.538 _refine.aniso_B[2][3] -0.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.310 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.110 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.900 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.797 _refine.B_iso_max 83.55 _refine.B_iso_min 8.35 _refine.occupancy_max 1.00 _refine.occupancy_min 0.19 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1890 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 278 _refine_hist.number_atoms_total 2168 _refine_hist.d_res_high 1.808 _refine_hist.d_res_low 29.896 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 1946 0.013 ? ? 'X-RAY DIFFRACTION' ? f_angle_d 2633 1.571 ? ? 'X-RAY DIFFRACTION' ? f_chiral_restr 259 0.114 ? ? 'X-RAY DIFFRACTION' ? f_plane_restr 352 0.006 ? ? 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 744 17.164 ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 1.808 1.890 8 87.000 2927 . 0.276 0.300 . 120 . 3047 . . 'X-RAY DIFFRACTION' 1.890 1.990 8 98.000 3294 . 0.238 0.313 . 140 . 3434 . . 'X-RAY DIFFRACTION' 1.990 2.115 8 100.000 3329 . 0.222 0.276 . 152 . 3481 . . 'X-RAY DIFFRACTION' 2.115 2.278 8 100.000 3360 . 0.222 0.268 . 126 . 3486 . . 'X-RAY DIFFRACTION' 2.278 2.507 8 100.000 3392 . 0.221 0.285 . 143 . 3535 . . 'X-RAY DIFFRACTION' 2.507 2.869 8 100.000 3373 . 0.212 0.240 . 146 . 3519 . . 'X-RAY DIFFRACTION' 2.869 3.614 8 100.000 3391 . 0.193 0.228 . 149 . 3540 . . 'X-RAY DIFFRACTION' 3.614 29.900 8 100.000 3475 . 0.200 0.240 . 141 . 3616 . . 'X-RAY DIFFRACTION' # _struct.entry_id 3LF4 _struct.title 'Crystal Structure of Fluorescent Timer Precursor Blue102' _struct.pdbx_descriptor 'Fluorescent Timer Precursor Blue102' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3LF4 _struct_keywords.pdbx_keywords 'FLUORESCENT PROTEIN' _struct_keywords.text 'Fluorescent Timers, Blue-to-red conversion, Chromophore degradation, FLUORESCENT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 57 ? PHE A 65 ? ALA A 57 PHE A 65 5 ? 9 HELX_P HELX_P2 2 SER B 2 ? VAL B 6 ? SER B 69 VAL B 73 5 ? 5 HELX_P HELX_P3 3 ASP B 14 ? SER B 19 ? ASP B 81 SER B 86 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? B 0YG 1 C ? ? ? 1_555 B SER 2 N ? ? B 0YG 67 B SER 69 1_555 ? ? ? ? ? ? ? 1.316 ? covale2 covale ? ? A PHE 65 C ? ? ? 1_555 A LEN 66 N ? ? A PHE 65 A LEN 66 1_555 ? ? ? ? ? ? ? 1.333 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 52 A . ? GLY 52 A PRO 53 A ? PRO 53 A 1 -3.39 2 PHE 20 B . ? PHE 87 B PRO 21 B ? PRO 88 B 1 9.34 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 13 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel A 10 11 ? anti-parallel A 11 12 ? anti-parallel A 12 13 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR B 73 ? TRP B 76 ? THR B 140 TRP B 143 A 2 ALA B 89 ? LEU B 100 ? ALA B 156 LEU B 167 A 3 GLY B 104 ? ALA B 116 ? GLY B 171 ALA B 183 A 4 PHE B 24 ? PHE B 32 ? PHE B 91 PHE B 99 A 5 VAL B 37 ? GLN B 47 ? VAL B 104 GLN B 114 A 6 GLU B 50 ? THR B 60 ? GLU B 117 THR B 127 A 7 MET A 12 ? VAL A 22 ? MET A 12 VAL A 22 A 8 HIS A 25 ? ARG A 36 ? HIS A 25 ARG A 36 A 9 THR A 41 ? LYS A 50 ? THR A 41 LYS A 50 A 10 ILE B 143 ? HIS B 154 ? ILE B 210 HIS B 221 A 11 TYR B 126 ? HIS B 137 ? TYR B 193 HIS B 204 A 12 ILE B 79 ? GLU B 86 ? ILE B 146 GLU B 153 A 13 ALA B 89 ? LEU B 100 ? ALA B 156 LEU B 167 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N MET B 74 ? N MET B 141 O LYS B 99 ? O LYS B 166 A 2 3 N LEU B 90 ? N LEU B 157 O TYR B 114 ? O TYR B 181 A 3 4 O LYS B 115 ? O LYS B 182 N LYS B 25 ? N LYS B 92 A 4 5 N PHE B 24 ? N PHE B 91 O SER B 44 ? O SER B 111 A 5 6 N THR B 39 ? N THR B 106 O ARG B 58 ? O ARG B 125 A 6 7 O GLY B 59 ? O GLY B 126 N SER A 21 ? N SER A 21 A 7 8 N MET A 18 ? N MET A 18 O ILE A 29 ? O ILE A 29 A 8 9 N GLU A 30 ? N GLU A 30 O LYS A 47 ? O LYS A 47 A 9 10 N LEU A 46 ? N LEU A 46 O VAL B 144 ? O VAL B 211 A 10 11 O GLU B 145 ? O GLU B 212 N SER B 136 ? N SER B 203 A 11 12 O TYR B 126 ? O TYR B 193 N MET B 83 ? N MET B 150 A 12 13 N TYR B 84 ? N TYR B 151 O LYS B 91 ? O LYS B 158 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 8 _struct_site.details 'BINDING SITE FOR RESIDUE LEN A 66' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 PHE A 14 ? PHE A 14 . ? 1_555 ? 2 AC1 8 GLN A 42 ? GLN A 42 . ? 1_555 ? 3 AC1 8 SER A 62 ? SER A 62 . ? 1_555 ? 4 AC1 8 GLN A 64 ? GLN A 64 . ? 1_555 ? 5 AC1 8 PHE A 65 ? PHE A 65 . ? 1_555 ? 6 AC1 8 0YG B 1 ? 0YG B 67 . ? 1_555 ? 7 AC1 8 GLN B 146 ? GLN B 213 . ? 1_555 ? 8 AC1 8 GLU B 148 ? GLU B 215 . ? 1_555 ? # _atom_sites.entry_id 3LF4 _atom_sites.fract_transf_matrix[1][1] 0.009314 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.007034 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023616 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014749 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 1 ? ? ? A . n A 1 2 GLU 2 2 ? ? ? A . n A 1 3 ASP 3 3 ? ? ? A . n A 1 4 ASN 4 4 4 ASN ASN A . n A 1 5 MET 5 5 5 MET MET A . n A 1 6 ALA 6 6 6 ALA ALA A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 ILE 8 8 8 ILE ILE A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 PHE 11 11 11 PHE PHE A . n A 1 12 MET 12 12 12 MET MET A . n A 1 13 ARG 13 13 13 ARG ARG A . n A 1 14 PHE 14 14 14 PHE PHE A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 HIS 17 17 17 HIS HIS A . n A 1 18 MET 18 18 18 MET MET A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 VAL 22 22 22 VAL VAL A . n A 1 23 ASN 23 23 23 ASN ASN A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 HIS 25 25 25 HIS HIS A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 PHE 27 27 27 PHE PHE A . n A 1 28 GLU 28 28 28 GLU GLU A . n A 1 29 ILE 29 29 29 ILE ILE A . n A 1 30 GLU 30 30 30 GLU GLU A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 GLU 32 32 32 GLU GLU A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 ARG 36 36 36 ARG ARG A . n A 1 37 PRO 37 37 37 PRO PRO A . n A 1 38 TYR 38 38 38 TYR TYR A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 THR 41 41 41 THR THR A . n A 1 42 GLN 42 42 42 GLN GLN A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 ALA 44 44 44 ALA ALA A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 LYS 47 47 47 LYS LYS A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 THR 49 49 49 THR THR A . n A 1 50 LYS 50 50 50 LYS LYS A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 PRO 53 53 53 PRO PRO A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 PRO 55 55 55 PRO PRO A . n A 1 56 PHE 56 56 56 PHE PHE A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 TRP 58 58 58 TRP TRP A . n A 1 59 ASP 59 59 59 ASP ASP A . n A 1 60 ILE 60 60 60 ILE ILE A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 SER 62 62 62 SER SER A . n A 1 63 PRO 63 63 63 PRO PRO A . n A 1 64 GLN 64 64 64 GLN GLN A . n A 1 65 PHE 65 65 65 PHE PHE A . n A 1 66 LEN 66 66 66 LEN LEN A . n B 2 1 0YG 1 67 67 0YG 0YG B . n B 2 2 SER 2 69 69 SER SER B . n B 2 3 ARG 3 70 70 ARG ARG B . n B 2 4 ALA 4 71 71 ALA ALA B . n B 2 5 TYR 5 72 72 TYR TYR B . n B 2 6 VAL 6 73 73 VAL VAL B . n B 2 7 LYS 7 74 74 LYS LYS B . n B 2 8 HIS 8 75 75 HIS HIS B . n B 2 9 PRO 9 76 76 PRO PRO B . n B 2 10 ALA 10 77 77 ALA ALA B . n B 2 11 ASP 11 78 78 ASP ASP B . n B 2 12 ILE 12 79 79 ILE ILE B . n B 2 13 PRO 13 80 80 PRO PRO B . n B 2 14 ASP 14 81 81 ASP ASP B . n B 2 15 TYR 15 82 82 TYR TYR B . n B 2 16 TRP 16 83 83 TRP TRP B . n B 2 17 LYS 17 84 84 LYS LYS B . n B 2 18 LEU 18 85 85 LEU LEU B . n B 2 19 SER 19 86 86 SER SER B . n B 2 20 PHE 20 87 87 PHE PHE B . n B 2 21 PRO 21 88 88 PRO PRO B . n B 2 22 GLU 22 89 89 GLU GLU B . n B 2 23 GLY 23 90 90 GLY GLY B . n B 2 24 PHE 24 91 91 PHE PHE B . n B 2 25 LYS 25 92 92 LYS LYS B . n B 2 26 TRP 26 93 93 TRP TRP B . n B 2 27 GLU 27 94 94 GLU GLU B . n B 2 28 ARG 28 95 95 ARG ARG B . n B 2 29 VAL 29 96 96 VAL VAL B . n B 2 30 MET 30 97 97 MET MET B . n B 2 31 ASN 31 98 98 ASN ASN B . n B 2 32 PHE 32 99 99 PHE PHE B . n B 2 33 GLU 33 100 100 GLU GLU B . n B 2 34 ASP 34 101 101 ASP ASP B . n B 2 35 GLY 35 102 102 GLY GLY B . n B 2 36 GLY 36 103 103 GLY GLY B . n B 2 37 VAL 37 104 104 VAL VAL B . n B 2 38 VAL 38 105 105 VAL VAL B . n B 2 39 THR 39 106 106 THR THR B . n B 2 40 VAL 40 107 107 VAL VAL B . n B 2 41 THR 41 108 108 THR THR B . n B 2 42 GLN 42 109 109 GLN GLN B . n B 2 43 ASP 43 110 110 ASP ASP B . n B 2 44 SER 44 111 111 SER SER B . n B 2 45 SER 45 112 112 SER SER B . n B 2 46 LEU 46 113 113 LEU LEU B . n B 2 47 GLN 47 114 114 GLN GLN B . n B 2 48 ASP 48 115 115 ASP ASP B . n B 2 49 GLY 49 116 116 GLY GLY B . n B 2 50 GLU 50 117 117 GLU GLU B . n B 2 51 PHE 51 118 118 PHE PHE B . n B 2 52 ILE 52 119 119 ILE ILE B . n B 2 53 TYR 53 120 120 TYR TYR B . n B 2 54 LYS 54 121 121 LYS LYS B . n B 2 55 VAL 55 122 122 VAL VAL B . n B 2 56 LYS 56 123 123 LYS LYS B . n B 2 57 LEU 57 124 124 LEU LEU B . n B 2 58 ARG 58 125 125 ARG ARG B . n B 2 59 GLY 59 126 126 GLY GLY B . n B 2 60 THR 60 127 127 THR THR B . n B 2 61 ASN 61 128 128 ASN ASN B . n B 2 62 PHE 62 129 129 PHE PHE B . n B 2 63 PRO 63 130 130 PRO PRO B . n B 2 64 SER 64 131 131 SER SER B . n B 2 65 ASP 65 132 132 ASP ASP B . n B 2 66 GLY 66 133 133 GLY GLY B . n B 2 67 PRO 67 134 134 PRO PRO B . n B 2 68 VAL 68 135 135 VAL VAL B . n B 2 69 MET 69 136 136 MET MET B . n B 2 70 GLN 70 137 137 GLN GLN B . n B 2 71 LYS 71 138 138 LYS LYS B . n B 2 72 LYS 72 139 139 LYS LYS B . n B 2 73 THR 73 140 140 THR THR B . n B 2 74 MET 74 141 141 MET MET B . n B 2 75 GLY 75 142 142 GLY GLY B . n B 2 76 TRP 76 143 143 TRP TRP B . n B 2 77 GLU 77 144 144 GLU GLU B . n B 2 78 ALA 78 145 145 ALA ALA B . n B 2 79 ILE 79 146 146 ILE ILE B . n B 2 80 SER 80 147 147 SER SER B . n B 2 81 GLU 81 148 148 GLU GLU B . n B 2 82 ARG 82 149 149 ARG ARG B . n B 2 83 MET 83 150 150 MET MET B . n B 2 84 TYR 84 151 151 TYR TYR B . n B 2 85 PRO 85 152 152 PRO PRO B . n B 2 86 GLU 86 153 153 GLU GLU B . n B 2 87 ASP 87 154 154 ASP ASP B . n B 2 88 GLY 88 155 155 GLY GLY B . n B 2 89 ALA 89 156 156 ALA ALA B . n B 2 90 LEU 90 157 157 LEU LEU B . n B 2 91 LYS 91 158 158 LYS LYS B . n B 2 92 GLY 92 159 159 GLY GLY B . n B 2 93 GLU 93 160 160 GLU GLU B . n B 2 94 ILE 94 161 161 ILE ILE B . n B 2 95 LYS 95 162 162 LYS LYS B . n B 2 96 GLN 96 163 163 GLN GLN B . n B 2 97 ARG 97 164 164 ARG ARG B . n B 2 98 LEU 98 165 165 LEU LEU B . n B 2 99 LYS 99 166 166 LYS LYS B . n B 2 100 LEU 100 167 167 LEU LEU B . n B 2 101 LYS 101 168 168 LYS LYS B . n B 2 102 ASP 102 169 169 ASP ASP B . n B 2 103 GLY 103 170 170 GLY GLY B . n B 2 104 GLY 104 171 171 GLY GLY B . n B 2 105 HIS 105 172 172 HIS HIS B . n B 2 106 TYR 106 173 173 TYR TYR B . n B 2 107 ASP 107 174 174 ASP ASP B . n B 2 108 ALA 108 175 175 ALA ALA B . n B 2 109 GLU 109 176 176 GLU GLU B . n B 2 110 VAL 110 177 177 VAL VAL B . n B 2 111 LYS 111 178 178 LYS LYS B . n B 2 112 THR 112 179 179 THR THR B . n B 2 113 THR 113 180 180 THR THR B . n B 2 114 TYR 114 181 181 TYR TYR B . n B 2 115 LYS 115 182 182 LYS LYS B . n B 2 116 ALA 116 183 183 ALA ALA B . n B 2 117 LYS 117 184 184 LYS LYS B . n B 2 118 LYS 118 185 185 LYS LYS B . n B 2 119 PRO 119 186 186 PRO PRO B . n B 2 120 VAL 120 187 187 VAL VAL B . n B 2 121 GLN 121 188 188 GLN GLN B . n B 2 122 LEU 122 189 189 LEU LEU B . n B 2 123 PRO 123 190 190 PRO PRO B . n B 2 124 GLY 124 191 191 GLY GLY B . n B 2 125 ALA 125 192 192 ALA ALA B . n B 2 126 TYR 126 193 193 TYR TYR B . n B 2 127 ASN 127 194 194 ASN ASN B . n B 2 128 VAL 128 195 195 VAL VAL B . n B 2 129 ASN 129 196 196 ASN ASN B . n B 2 130 ILE 130 197 197 ILE ILE B . n B 2 131 LYS 131 198 198 LYS LYS B . n B 2 132 LEU 132 199 199 LEU LEU B . n B 2 133 ASP 133 200 200 ASP ASP B . n B 2 134 ILE 134 201 201 ILE ILE B . n B 2 135 THR 135 202 202 THR THR B . n B 2 136 SER 136 203 203 SER SER B . n B 2 137 HIS 137 204 204 HIS HIS B . n B 2 138 ASN 138 205 205 ASN ASN B . n B 2 139 GLU 139 206 206 GLU GLU B . n B 2 140 ASP 140 207 207 ASP ASP B . n B 2 141 TYR 141 208 208 TYR TYR B . n B 2 142 THR 142 209 209 THR THR B . n B 2 143 ILE 143 210 210 ILE ILE B . n B 2 144 VAL 144 211 211 VAL VAL B . n B 2 145 GLU 145 212 212 GLU GLU B . n B 2 146 GLN 146 213 213 GLN GLN B . n B 2 147 TYR 147 214 214 TYR TYR B . n B 2 148 GLU 148 215 215 GLU GLU B . n B 2 149 ARG 149 216 216 ARG ARG B . n B 2 150 ALA 150 217 217 ALA ALA B . n B 2 151 GLU 151 218 218 GLU GLU B . n B 2 152 GLY 152 219 219 GLY GLY B . n B 2 153 ARG 153 220 220 ARG ARG B . n B 2 154 HIS 154 221 221 HIS HIS B . n B 2 155 SER 155 222 222 SER SER B . n B 2 156 THR 156 223 223 THR THR B . n B 2 157 GLY 157 224 224 GLY GLY B . n B 2 158 GLY 158 225 225 GLY GLY B . n B 2 159 MET 159 226 226 MET MET B . n B 2 160 ASP 160 227 227 ASP ASP B . n B 2 161 GLU 161 228 ? ? ? B . n B 2 162 LEU 162 229 ? ? ? B . n B 2 163 TYR 163 230 ? ? ? B . n B 2 164 LYS 164 231 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 232 232 HOH HOH A . C 3 HOH 2 233 233 HOH HOH A . C 3 HOH 3 234 234 HOH HOH A . C 3 HOH 4 235 235 HOH HOH A . C 3 HOH 5 236 236 HOH HOH A . C 3 HOH 6 237 237 HOH HOH A . C 3 HOH 7 238 238 HOH HOH A . C 3 HOH 8 239 239 HOH HOH A . C 3 HOH 9 240 240 HOH HOH A . C 3 HOH 10 241 241 HOH HOH A . C 3 HOH 11 242 242 HOH HOH A . C 3 HOH 12 243 243 HOH HOH A . C 3 HOH 13 244 244 HOH HOH A . C 3 HOH 14 245 245 HOH HOH A . C 3 HOH 15 246 246 HOH HOH A . C 3 HOH 16 247 247 HOH HOH A . C 3 HOH 17 248 248 HOH HOH A . C 3 HOH 18 249 249 HOH HOH A . C 3 HOH 19 250 250 HOH HOH A . C 3 HOH 20 251 251 HOH HOH A . C 3 HOH 21 252 252 HOH HOH A . C 3 HOH 22 253 253 HOH HOH A . C 3 HOH 23 254 254 HOH HOH A . C 3 HOH 24 255 255 HOH HOH A . C 3 HOH 25 256 256 HOH HOH A . C 3 HOH 26 257 257 HOH HOH A . C 3 HOH 27 258 258 HOH HOH A . C 3 HOH 28 259 259 HOH HOH A . C 3 HOH 29 260 260 HOH HOH A . C 3 HOH 30 261 261 HOH HOH A . C 3 HOH 31 262 262 HOH HOH A . C 3 HOH 32 263 263 HOH HOH A . C 3 HOH 33 264 264 HOH HOH A . C 3 HOH 34 265 265 HOH HOH A . C 3 HOH 35 266 266 HOH HOH A . C 3 HOH 36 267 267 HOH HOH A . C 3 HOH 37 268 268 HOH HOH A . C 3 HOH 38 269 269 HOH HOH A . C 3 HOH 39 270 270 HOH HOH A . C 3 HOH 40 271 271 HOH HOH A . C 3 HOH 41 272 272 HOH HOH A . C 3 HOH 42 273 273 HOH HOH A . C 3 HOH 43 274 274 HOH HOH A . C 3 HOH 44 275 275 HOH HOH A . C 3 HOH 45 276 276 HOH HOH A . C 3 HOH 46 277 277 HOH HOH A . C 3 HOH 47 278 278 HOH HOH A . C 3 HOH 48 279 279 HOH HOH A . C 3 HOH 49 280 280 HOH HOH A . C 3 HOH 50 281 281 HOH HOH A . C 3 HOH 51 282 282 HOH HOH A . C 3 HOH 52 283 283 HOH HOH A . C 3 HOH 53 284 284 HOH HOH A . C 3 HOH 54 285 285 HOH HOH A . C 3 HOH 55 286 286 HOH HOH A . C 3 HOH 56 287 287 HOH HOH A . C 3 HOH 57 288 288 HOH HOH A . C 3 HOH 58 289 289 HOH HOH A . C 3 HOH 59 290 290 HOH HOH A . D 3 HOH 1 291 291 HOH HOH B . D 3 HOH 2 292 292 HOH HOH B . D 3 HOH 3 293 293 HOH HOH B . D 3 HOH 4 294 294 HOH HOH B . D 3 HOH 5 295 295 HOH HOH B . D 3 HOH 6 296 296 HOH HOH B . D 3 HOH 7 297 297 HOH HOH B . D 3 HOH 8 298 298 HOH HOH B . D 3 HOH 9 299 299 HOH HOH B . D 3 HOH 10 300 300 HOH HOH B . D 3 HOH 11 301 301 HOH HOH B . D 3 HOH 12 302 302 HOH HOH B . D 3 HOH 13 303 303 HOH HOH B . D 3 HOH 14 304 304 HOH HOH B . D 3 HOH 15 305 305 HOH HOH B . D 3 HOH 16 306 306 HOH HOH B . D 3 HOH 17 307 307 HOH HOH B . D 3 HOH 18 308 308 HOH HOH B . D 3 HOH 19 309 309 HOH HOH B . D 3 HOH 20 310 310 HOH HOH B . D 3 HOH 21 311 311 HOH HOH B . D 3 HOH 22 312 312 HOH HOH B . D 3 HOH 23 313 313 HOH HOH B . D 3 HOH 24 314 314 HOH HOH B . D 3 HOH 25 315 315 HOH HOH B . D 3 HOH 26 316 316 HOH HOH B . D 3 HOH 27 317 317 HOH HOH B . D 3 HOH 28 318 318 HOH HOH B . D 3 HOH 29 319 319 HOH HOH B . D 3 HOH 30 320 320 HOH HOH B . D 3 HOH 31 321 321 HOH HOH B . D 3 HOH 32 322 322 HOH HOH B . D 3 HOH 33 323 323 HOH HOH B . D 3 HOH 34 324 324 HOH HOH B . D 3 HOH 35 325 325 HOH HOH B . D 3 HOH 36 326 326 HOH HOH B . D 3 HOH 37 327 327 HOH HOH B . D 3 HOH 38 328 328 HOH HOH B . D 3 HOH 39 329 329 HOH HOH B . D 3 HOH 40 330 330 HOH HOH B . D 3 HOH 41 331 331 HOH HOH B . D 3 HOH 42 332 332 HOH HOH B . D 3 HOH 43 333 333 HOH HOH B . D 3 HOH 44 334 334 HOH HOH B . D 3 HOH 45 335 335 HOH HOH B . D 3 HOH 46 336 336 HOH HOH B . D 3 HOH 47 337 337 HOH HOH B . D 3 HOH 48 338 338 HOH HOH B . D 3 HOH 49 339 339 HOH HOH B . D 3 HOH 50 340 340 HOH HOH B . D 3 HOH 51 341 341 HOH HOH B . D 3 HOH 52 342 342 HOH HOH B . D 3 HOH 53 343 343 HOH HOH B . D 3 HOH 54 344 344 HOH HOH B . D 3 HOH 55 345 345 HOH HOH B . D 3 HOH 56 346 346 HOH HOH B . D 3 HOH 57 347 347 HOH HOH B . D 3 HOH 58 348 348 HOH HOH B . D 3 HOH 59 349 349 HOH HOH B . D 3 HOH 60 350 350 HOH HOH B . D 3 HOH 61 351 351 HOH HOH B . D 3 HOH 62 352 352 HOH HOH B . D 3 HOH 63 353 353 HOH HOH B . D 3 HOH 64 354 354 HOH HOH B . D 3 HOH 65 355 355 HOH HOH B . D 3 HOH 66 356 356 HOH HOH B . D 3 HOH 67 357 357 HOH HOH B . D 3 HOH 68 358 358 HOH HOH B . D 3 HOH 69 359 359 HOH HOH B . D 3 HOH 70 360 360 HOH HOH B . D 3 HOH 71 361 361 HOH HOH B . D 3 HOH 72 362 362 HOH HOH B . D 3 HOH 73 363 363 HOH HOH B . D 3 HOH 74 364 364 HOH HOH B . D 3 HOH 75 365 365 HOH HOH B . D 3 HOH 76 366 366 HOH HOH B . D 3 HOH 77 367 367 HOH HOH B . D 3 HOH 78 368 368 HOH HOH B . D 3 HOH 79 369 369 HOH HOH B . D 3 HOH 80 370 370 HOH HOH B . D 3 HOH 81 371 371 HOH HOH B . D 3 HOH 82 372 372 HOH HOH B . D 3 HOH 83 373 373 HOH HOH B . D 3 HOH 84 374 374 HOH HOH B . D 3 HOH 85 375 375 HOH HOH B . D 3 HOH 86 376 376 HOH HOH B . D 3 HOH 87 377 377 HOH HOH B . D 3 HOH 88 378 378 HOH HOH B . D 3 HOH 89 379 379 HOH HOH B . D 3 HOH 90 380 380 HOH HOH B . D 3 HOH 91 381 381 HOH HOH B . D 3 HOH 92 382 382 HOH HOH B . D 3 HOH 93 383 383 HOH HOH B . D 3 HOH 94 384 384 HOH HOH B . D 3 HOH 95 385 385 HOH HOH B . D 3 HOH 96 386 386 HOH HOH B . D 3 HOH 97 387 387 HOH HOH B . D 3 HOH 98 388 388 HOH HOH B . D 3 HOH 99 389 389 HOH HOH B . D 3 HOH 100 390 390 HOH HOH B . D 3 HOH 101 391 391 HOH HOH B . D 3 HOH 102 392 392 HOH HOH B . D 3 HOH 103 393 393 HOH HOH B . D 3 HOH 104 394 394 HOH HOH B . D 3 HOH 105 395 395 HOH HOH B . D 3 HOH 106 396 396 HOH HOH B . D 3 HOH 107 397 397 HOH HOH B . D 3 HOH 108 398 398 HOH HOH B . D 3 HOH 109 399 399 HOH HOH B . D 3 HOH 110 400 400 HOH HOH B . D 3 HOH 111 401 401 HOH HOH B . D 3 HOH 112 402 402 HOH HOH B . D 3 HOH 113 403 403 HOH HOH B . D 3 HOH 114 404 404 HOH HOH B . D 3 HOH 115 405 405 HOH HOH B . D 3 HOH 116 406 406 HOH HOH B . D 3 HOH 117 407 407 HOH HOH B . D 3 HOH 118 408 408 HOH HOH B . D 3 HOH 119 409 409 HOH HOH B . D 3 HOH 120 410 410 HOH HOH B . D 3 HOH 121 411 411 HOH HOH B . D 3 HOH 122 412 412 HOH HOH B . D 3 HOH 123 413 413 HOH HOH B . D 3 HOH 124 414 414 HOH HOH B . D 3 HOH 125 415 415 HOH HOH B . D 3 HOH 126 416 416 HOH HOH B . D 3 HOH 127 417 417 HOH HOH B . D 3 HOH 128 418 418 HOH HOH B . D 3 HOH 129 419 419 HOH HOH B . D 3 HOH 130 420 420 HOH HOH B . D 3 HOH 131 421 421 HOH HOH B . D 3 HOH 132 422 422 HOH HOH B . D 3 HOH 133 423 423 HOH HOH B . D 3 HOH 134 424 424 HOH HOH B . D 3 HOH 135 425 425 HOH HOH B . D 3 HOH 136 426 426 HOH HOH B . D 3 HOH 137 427 427 HOH HOH B . D 3 HOH 138 428 428 HOH HOH B . D 3 HOH 139 429 429 HOH HOH B . D 3 HOH 140 430 430 HOH HOH B . D 3 HOH 141 431 431 HOH HOH B . D 3 HOH 142 432 432 HOH HOH B . D 3 HOH 143 433 433 HOH HOH B . D 3 HOH 144 434 434 HOH HOH B . D 3 HOH 145 435 435 HOH HOH B . D 3 HOH 146 436 436 HOH HOH B . D 3 HOH 147 437 437 HOH HOH B . D 3 HOH 148 438 438 HOH HOH B . D 3 HOH 149 439 439 HOH HOH B . D 3 HOH 150 440 440 HOH HOH B . D 3 HOH 151 441 441 HOH HOH B . D 3 HOH 152 442 442 HOH HOH B . D 3 HOH 153 443 443 HOH HOH B . D 3 HOH 154 444 444 HOH HOH B . D 3 HOH 155 445 445 HOH HOH B . D 3 HOH 156 446 446 HOH HOH B . D 3 HOH 157 447 447 HOH HOH B . D 3 HOH 158 448 448 HOH HOH B . D 3 HOH 159 449 449 HOH HOH B . D 3 HOH 160 450 450 HOH HOH B . D 3 HOH 161 451 451 HOH HOH B . D 3 HOH 162 452 452 HOH HOH B . D 3 HOH 163 453 453 HOH HOH B . D 3 HOH 164 454 454 HOH HOH B . D 3 HOH 165 455 455 HOH HOH B . D 3 HOH 166 456 456 HOH HOH B . D 3 HOH 167 457 457 HOH HOH B . D 3 HOH 168 458 458 HOH HOH B . D 3 HOH 169 459 459 HOH HOH B . D 3 HOH 170 460 460 HOH HOH B . D 3 HOH 171 461 461 HOH HOH B . D 3 HOH 172 462 462 HOH HOH B . D 3 HOH 173 463 463 HOH HOH B . D 3 HOH 174 464 464 HOH HOH B . D 3 HOH 175 465 465 HOH HOH B . D 3 HOH 176 466 466 HOH HOH B . D 3 HOH 177 467 467 HOH HOH B . D 3 HOH 178 468 468 HOH HOH B . D 3 HOH 179 469 469 HOH HOH B . D 3 HOH 180 470 470 HOH HOH B . D 3 HOH 181 471 471 HOH HOH B . D 3 HOH 182 472 472 HOH HOH B . D 3 HOH 183 473 473 HOH HOH B . D 3 HOH 184 474 474 HOH HOH B . D 3 HOH 185 475 475 HOH HOH B . D 3 HOH 186 476 476 HOH HOH B . D 3 HOH 187 477 477 HOH HOH B . D 3 HOH 188 478 478 HOH HOH B . D 3 HOH 189 479 479 HOH HOH B . D 3 HOH 190 480 480 HOH HOH B . D 3 HOH 191 481 481 HOH HOH B . D 3 HOH 192 482 482 HOH HOH B . D 3 HOH 193 483 483 HOH HOH B . D 3 HOH 194 484 484 HOH HOH B . D 3 HOH 195 485 485 HOH HOH B . D 3 HOH 196 486 486 HOH HOH B . D 3 HOH 197 487 487 HOH HOH B . D 3 HOH 198 488 488 HOH HOH B . D 3 HOH 199 489 489 HOH HOH B . D 3 HOH 200 490 490 HOH HOH B . D 3 HOH 201 491 491 HOH HOH B . D 3 HOH 202 492 492 HOH HOH B . D 3 HOH 203 493 493 HOH HOH B . D 3 HOH 204 494 494 HOH HOH B . D 3 HOH 205 495 495 HOH HOH B . D 3 HOH 206 496 496 HOH HOH B . D 3 HOH 207 497 497 HOH HOH B . D 3 HOH 208 498 498 HOH HOH B . D 3 HOH 209 499 499 HOH HOH B . D 3 HOH 210 500 500 HOH HOH B . D 3 HOH 211 501 501 HOH HOH B . D 3 HOH 212 502 502 HOH HOH B . D 3 HOH 213 503 503 HOH HOH B . D 3 HOH 214 504 504 HOH HOH B . D 3 HOH 215 505 505 HOH HOH B . D 3 HOH 216 506 506 HOH HOH B . D 3 HOH 217 507 507 HOH HOH B . D 3 HOH 218 508 508 HOH HOH B . D 3 HOH 219 509 509 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A LEN 66 A LEN 66 ? LEU 3-METHYLBUTAN-1-AMINE 2 B 0YG 1 B 0YG 67 ? TYR ? 3 B 0YG 1 B 0YG 67 ? GLY ? # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4560 ? 1 MORE -26 ? 1 'SSA (A^2)' 10280 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 273 ? C HOH . 2 1 A HOH 283 ? C HOH . 3 1 A HOH 287 ? C HOH . 4 1 B HOH 390 ? D HOH . 5 1 B HOH 438 ? D HOH . 6 1 B HOH 440 ? D HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-03-09 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.contact_author' 3 3 'Structure model' '_software.contact_author_email' 4 3 'Structure model' '_software.date' 5 3 'Structure model' '_software.language' 6 3 'Structure model' '_software.location' 7 3 'Structure model' '_software.name' 8 3 'Structure model' '_software.type' 9 3 'Structure model' '_software.version' # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 PHENIX . ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 4 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 SERGUI . ? ? ? ? 'data collection' ? ? ? 6 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 7 MOLREP . ? ? ? ? phasing ? ? ? # _pdbx_entry_details.entry_id 3LF4 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ;IN THIS FLUORESCENT PROTEIN THE CHROMOPHORE MOIETY FORMED FROM RESIDUES LEU66-TYR67-GLY68, (0YG66), UNDERGOES HYDROLYTIC DEGRADATION THAT RESULT IN PEPTIDE BOND CLEAVAGE OF THE PROTEIN BETWEEN RESIDUES 66 AND 67 AND ALSO DECARBOXYLATION OF LEU66.HERE, LEU66 IS CLEAVED OUT FROM THE CHROMOPHORE, DECARBOXYLATED BUT REMAINS ATTACHED TO PHE65. DEGRADED CHROMOPHORE MOIETY IS COMPOSED OF RESIDUES TYR67-GLY68 ONLY ; _pdbx_entry_details.source_details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B HOH 326 ? ? O B HOH 348 ? ? 2.01 2 1 O B ASP 132 ? A O B HOH 461 ? ? 2.12 3 1 OE1 A GLU 32 ? A O A HOH 247 ? ? 2.18 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER B 69 ? ? -117.92 76.27 2 1 SER B 69 ? ? -117.92 76.25 3 1 TYR B 72 ? ? -108.28 42.80 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLU 1 ? A GLU 1 2 1 Y 1 A GLU 2 ? A GLU 2 3 1 Y 1 A ASP 3 ? A ASP 3 4 1 Y 1 B GLU 228 ? B GLU 161 5 1 Y 1 B LEU 229 ? B LEU 162 6 1 Y 1 B TYR 230 ? B TYR 163 7 1 Y 1 B LYS 231 ? B LYS 164 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #