data_3LH1 # _entry.id 3LH1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3LH1 pdb_00003lh1 10.2210/pdb3lh1/pdb RCSB RCSB057268 ? ? WWPDB D_1000057268 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-08-25 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 4 'Structure model' 1 3 2021-10-13 5 'Structure model' 1 4 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' database_2 3 4 'Structure model' struct_ref_seq_dif 4 5 'Structure model' chem_comp_atom 5 5 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.entry_id 3LH1 _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-01-21 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3lgi 'wild type domain' unspecified PDB 3lgt 'y162/h198p double mutant domain' unspecified PDB 3LGu . unspecified PDB 3lgv 'h198p mutant domain' unspecified PDB 3LGw . unspecified PDB 3Lgy . unspecified PDB 3LH3 . unspecified PDB 3b8j 'this entry supersedes 3b8j' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sohn, J.' 1 'Grant, R.A.' 2 'Sauer, R.T.' 3 # _citation.id primary _citation.title 'Allostery is an intrinsic property of the protease domain of DegS: implications for enzyme function and evolution.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 285 _citation.page_first 34039 _citation.page_last 34047 _citation.year 2010 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20739286 _citation.pdbx_database_id_DOI 10.1074/jbc.M110.135541 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sohn, J.' 1 ? primary 'Grant, R.A.' 2 ? primary 'Sauer, R.T.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protease degS' 25833.125 1 3.4.21.- q191a 'protease domain' ? 2 water nat water 18.015 10 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MRGSHHHHHHGRSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNK HVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISA TGRIGLNPTGRQNFLATDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVI R ; _entity_poly.pdbx_seq_one_letter_code_can ;MRGSHHHHHHGRSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNK HVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISA TGRIGLNPTGRQNFLATDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVI R ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ARG n 1 3 GLY n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 GLY n 1 12 ARG n 1 13 SER n 1 14 LEU n 1 15 ASN n 1 16 PRO n 1 17 LEU n 1 18 SER n 1 19 THR n 1 20 PRO n 1 21 GLN n 1 22 PHE n 1 23 ASP n 1 24 SER n 1 25 THR n 1 26 ASP n 1 27 GLU n 1 28 THR n 1 29 PRO n 1 30 ALA n 1 31 SER n 1 32 TYR n 1 33 ASN n 1 34 LEU n 1 35 ALA n 1 36 VAL n 1 37 ARG n 1 38 ARG n 1 39 ALA n 1 40 ALA n 1 41 PRO n 1 42 ALA n 1 43 VAL n 1 44 VAL n 1 45 ASN n 1 46 VAL n 1 47 TYR n 1 48 ASN n 1 49 ARG n 1 50 GLY n 1 51 LEU n 1 52 ASN n 1 53 THR n 1 54 ASN n 1 55 SER n 1 56 HIS n 1 57 ASN n 1 58 GLN n 1 59 LEU n 1 60 GLU n 1 61 ILE n 1 62 ARG n 1 63 THR n 1 64 LEU n 1 65 GLY n 1 66 SER n 1 67 GLY n 1 68 VAL n 1 69 ILE n 1 70 MET n 1 71 ASP n 1 72 GLN n 1 73 ARG n 1 74 GLY n 1 75 TYR n 1 76 ILE n 1 77 ILE n 1 78 THR n 1 79 ASN n 1 80 LYS n 1 81 HIS n 1 82 VAL n 1 83 ILE n 1 84 ASN n 1 85 ASP n 1 86 ALA n 1 87 ASP n 1 88 GLN n 1 89 ILE n 1 90 ILE n 1 91 VAL n 1 92 ALA n 1 93 LEU n 1 94 GLN n 1 95 ASP n 1 96 GLY n 1 97 ARG n 1 98 VAL n 1 99 PHE n 1 100 GLU n 1 101 ALA n 1 102 LEU n 1 103 LEU n 1 104 VAL n 1 105 GLY n 1 106 SER n 1 107 ASP n 1 108 SER n 1 109 LEU n 1 110 THR n 1 111 ASP n 1 112 LEU n 1 113 ALA n 1 114 VAL n 1 115 LEU n 1 116 LYS n 1 117 ILE n 1 118 ASN n 1 119 ALA n 1 120 THR n 1 121 GLY n 1 122 GLY n 1 123 LEU n 1 124 PRO n 1 125 THR n 1 126 ILE n 1 127 PRO n 1 128 ILE n 1 129 ASN n 1 130 ALA n 1 131 ARG n 1 132 ARG n 1 133 VAL n 1 134 PRO n 1 135 HIS n 1 136 ILE n 1 137 GLY n 1 138 ASP n 1 139 VAL n 1 140 VAL n 1 141 LEU n 1 142 ALA n 1 143 ILE n 1 144 GLY n 1 145 ASN n 1 146 PRO n 1 147 TYR n 1 148 ASN n 1 149 LEU n 1 150 GLY n 1 151 GLN n 1 152 THR n 1 153 ILE n 1 154 THR n 1 155 GLN n 1 156 GLY n 1 157 ILE n 1 158 ILE n 1 159 SER n 1 160 ALA n 1 161 THR n 1 162 GLY n 1 163 ARG n 1 164 ILE n 1 165 GLY n 1 166 LEU n 1 167 ASN n 1 168 PRO n 1 169 THR n 1 170 GLY n 1 171 ARG n 1 172 GLN n 1 173 ASN n 1 174 PHE n 1 175 LEU n 1 176 ALA n 1 177 THR n 1 178 ASP n 1 179 ALA n 1 180 SER n 1 181 ILE n 1 182 ASN n 1 183 HIS n 1 184 GLY n 1 185 ASN n 1 186 SER n 1 187 GLY n 1 188 GLY n 1 189 ALA n 1 190 LEU n 1 191 VAL n 1 192 ASN n 1 193 SER n 1 194 LEU n 1 195 GLY n 1 196 GLU n 1 197 LEU n 1 198 MET n 1 199 GLY n 1 200 ILE n 1 201 ASN n 1 202 THR n 1 203 LEU n 1 204 SER n 1 205 PHE n 1 206 ASP n 1 207 LYS n 1 208 SER n 1 209 ASN n 1 210 ASP n 1 211 GLY n 1 212 GLU n 1 213 THR n 1 214 PRO n 1 215 GLU n 1 216 GLY n 1 217 ILE n 1 218 GLY n 1 219 PHE n 1 220 ALA n 1 221 ILE n 1 222 PRO n 1 223 PHE n 1 224 GLN n 1 225 LEU n 1 226 ALA n 1 227 THR n 1 228 LYS n 1 229 ILE n 1 230 MET n 1 231 ASP n 1 232 LYS n 1 233 LEU n 1 234 ILE n 1 235 ARG n 1 236 ASP n 1 237 GLY n 1 238 ARG n 1 239 VAL n 1 240 ILE n 1 241 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'b3235, degS, hhoB, htrH, JW3204' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain K12 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83333 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'X90(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET21b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 16 ? ? ? A . n A 1 2 ARG 2 17 ? ? ? A . n A 1 3 GLY 3 18 ? ? ? A . n A 1 4 SER 4 19 ? ? ? A . n A 1 5 HIS 5 20 ? ? ? A . n A 1 6 HIS 6 21 ? ? ? A . n A 1 7 HIS 7 22 ? ? ? A . n A 1 8 HIS 8 23 ? ? ? A . n A 1 9 HIS 9 24 ? ? ? A . n A 1 10 HIS 10 25 ? ? ? A . n A 1 11 GLY 11 26 ? ? ? A . n A 1 12 ARG 12 27 ? ? ? A . n A 1 13 SER 13 28 ? ? ? A . n A 1 14 LEU 14 29 ? ? ? A . n A 1 15 ASN 15 30 ? ? ? A . n A 1 16 PRO 16 31 ? ? ? A . n A 1 17 LEU 17 32 ? ? ? A . n A 1 18 SER 18 33 ? ? ? A . n A 1 19 THR 19 34 ? ? ? A . n A 1 20 PRO 20 35 ? ? ? A . n A 1 21 GLN 21 36 ? ? ? A . n A 1 22 PHE 22 37 ? ? ? A . n A 1 23 ASP 23 38 ? ? ? A . n A 1 24 SER 24 39 39 SER SER A . n A 1 25 THR 25 40 40 THR THR A . n A 1 26 ASP 26 41 41 ASP ASP A . n A 1 27 GLU 27 42 42 GLU GLU A . n A 1 28 THR 28 43 43 THR THR A . n A 1 29 PRO 29 44 44 PRO PRO A . n A 1 30 ALA 30 45 45 ALA ALA A . n A 1 31 SER 31 46 46 SER SER A . n A 1 32 TYR 32 47 47 TYR TYR A . n A 1 33 ASN 33 48 48 ASN ASN A . n A 1 34 LEU 34 49 49 LEU LEU A . n A 1 35 ALA 35 50 50 ALA ALA A . n A 1 36 VAL 36 51 51 VAL VAL A . n A 1 37 ARG 37 52 52 ARG ARG A . n A 1 38 ARG 38 53 53 ARG ARG A . n A 1 39 ALA 39 54 54 ALA ALA A . n A 1 40 ALA 40 55 55 ALA ALA A . n A 1 41 PRO 41 56 56 PRO PRO A . n A 1 42 ALA 42 57 57 ALA ALA A . n A 1 43 VAL 43 58 58 VAL VAL A . n A 1 44 VAL 44 59 59 VAL VAL A . n A 1 45 ASN 45 60 60 ASN ASN A . n A 1 46 VAL 46 61 61 VAL VAL A . n A 1 47 TYR 47 62 62 TYR TYR A . n A 1 48 ASN 48 63 63 ASN ASN A . n A 1 49 ARG 49 64 64 ARG ARG A . n A 1 50 GLY 50 65 65 GLY GLY A . n A 1 51 LEU 51 66 66 LEU LEU A . n A 1 52 ASN 52 67 ? ? ? A . n A 1 53 THR 53 68 ? ? ? A . n A 1 54 ASN 54 69 ? ? ? A . n A 1 55 SER 55 70 ? ? ? A . n A 1 56 HIS 56 71 ? ? ? A . n A 1 57 ASN 57 72 ? ? ? A . n A 1 58 GLN 58 73 ? ? ? A . n A 1 59 LEU 59 74 74 LEU LEU A . n A 1 60 GLU 60 75 75 GLU GLU A . n A 1 61 ILE 61 76 76 ILE ILE A . n A 1 62 ARG 62 77 77 ARG ARG A . n A 1 63 THR 63 78 78 THR THR A . n A 1 64 LEU 64 79 79 LEU LEU A . n A 1 65 GLY 65 80 80 GLY GLY A . n A 1 66 SER 66 81 81 SER SER A . n A 1 67 GLY 67 82 82 GLY GLY A . n A 1 68 VAL 68 83 83 VAL VAL A . n A 1 69 ILE 69 84 84 ILE ILE A . n A 1 70 MET 70 85 85 MET MET A . n A 1 71 ASP 71 86 86 ASP ASP A . n A 1 72 GLN 72 87 87 GLN GLN A . n A 1 73 ARG 73 88 88 ARG ARG A . n A 1 74 GLY 74 89 89 GLY GLY A . n A 1 75 TYR 75 90 90 TYR TYR A . n A 1 76 ILE 76 91 91 ILE ILE A . n A 1 77 ILE 77 92 92 ILE ILE A . n A 1 78 THR 78 93 93 THR THR A . n A 1 79 ASN 79 94 94 ASN ASN A . n A 1 80 LYS 80 95 95 LYS LYS A . n A 1 81 HIS 81 96 96 HIS HIS A . n A 1 82 VAL 82 97 97 VAL VAL A . n A 1 83 ILE 83 98 98 ILE ILE A . n A 1 84 ASN 84 99 99 ASN ASN A . n A 1 85 ASP 85 100 100 ASP ASP A . n A 1 86 ALA 86 101 101 ALA ALA A . n A 1 87 ASP 87 102 102 ASP ASP A . n A 1 88 GLN 88 103 103 GLN GLN A . n A 1 89 ILE 89 104 104 ILE ILE A . n A 1 90 ILE 90 105 105 ILE ILE A . n A 1 91 VAL 91 106 106 VAL VAL A . n A 1 92 ALA 92 107 107 ALA ALA A . n A 1 93 LEU 93 108 108 LEU LEU A . n A 1 94 GLN 94 109 109 GLN GLN A . n A 1 95 ASP 95 110 110 ASP ASP A . n A 1 96 GLY 96 111 111 GLY GLY A . n A 1 97 ARG 97 112 112 ARG ARG A . n A 1 98 VAL 98 113 113 VAL VAL A . n A 1 99 PHE 99 114 114 PHE PHE A . n A 1 100 GLU 100 115 115 GLU GLU A . n A 1 101 ALA 101 116 116 ALA ALA A . n A 1 102 LEU 102 117 117 LEU LEU A . n A 1 103 LEU 103 118 118 LEU LEU A . n A 1 104 VAL 104 119 119 VAL VAL A . n A 1 105 GLY 105 120 120 GLY GLY A . n A 1 106 SER 106 121 121 SER SER A . n A 1 107 ASP 107 122 122 ASP ASP A . n A 1 108 SER 108 123 123 SER SER A . n A 1 109 LEU 109 124 124 LEU LEU A . n A 1 110 THR 110 125 125 THR THR A . n A 1 111 ASP 111 126 126 ASP ASP A . n A 1 112 LEU 112 127 127 LEU LEU A . n A 1 113 ALA 113 128 128 ALA ALA A . n A 1 114 VAL 114 129 129 VAL VAL A . n A 1 115 LEU 115 130 130 LEU LEU A . n A 1 116 LYS 116 131 131 LYS LYS A . n A 1 117 ILE 117 132 132 ILE ILE A . n A 1 118 ASN 118 133 133 ASN ASN A . n A 1 119 ALA 119 134 134 ALA ALA A . n A 1 120 THR 120 135 135 THR THR A . n A 1 121 GLY 121 136 136 GLY GLY A . n A 1 122 GLY 122 137 137 GLY GLY A . n A 1 123 LEU 123 138 138 LEU LEU A . n A 1 124 PRO 124 139 139 PRO PRO A . n A 1 125 THR 125 140 140 THR THR A . n A 1 126 ILE 126 141 141 ILE ILE A . n A 1 127 PRO 127 142 142 PRO PRO A . n A 1 128 ILE 128 143 143 ILE ILE A . n A 1 129 ASN 129 144 144 ASN ASN A . n A 1 130 ALA 130 145 145 ALA ALA A . n A 1 131 ARG 131 146 146 ARG ARG A . n A 1 132 ARG 132 147 147 ARG ARG A . n A 1 133 VAL 133 148 148 VAL VAL A . n A 1 134 PRO 134 149 149 PRO PRO A . n A 1 135 HIS 135 150 150 HIS HIS A . n A 1 136 ILE 136 151 151 ILE ILE A . n A 1 137 GLY 137 152 152 GLY GLY A . n A 1 138 ASP 138 153 153 ASP ASP A . n A 1 139 VAL 139 154 154 VAL VAL A . n A 1 140 VAL 140 155 155 VAL VAL A . n A 1 141 LEU 141 156 156 LEU LEU A . n A 1 142 ALA 142 157 157 ALA ALA A . n A 1 143 ILE 143 158 158 ILE ILE A . n A 1 144 GLY 144 159 159 GLY GLY A . n A 1 145 ASN 145 160 160 ASN ASN A . n A 1 146 PRO 146 161 161 PRO PRO A . n A 1 147 TYR 147 162 ? ? ? A . n A 1 148 ASN 148 163 ? ? ? A . n A 1 149 LEU 149 164 164 LEU LEU A . n A 1 150 GLY 150 165 165 GLY GLY A . n A 1 151 GLN 151 166 166 GLN GLN A . n A 1 152 THR 152 167 167 THR THR A . n A 1 153 ILE 153 168 168 ILE ILE A . n A 1 154 THR 154 169 169 THR THR A . n A 1 155 GLN 155 170 170 GLN GLN A . n A 1 156 GLY 156 171 171 GLY GLY A . n A 1 157 ILE 157 172 172 ILE ILE A . n A 1 158 ILE 158 173 173 ILE ILE A . n A 1 159 SER 159 174 174 SER SER A . n A 1 160 ALA 160 175 175 ALA ALA A . n A 1 161 THR 161 176 176 THR THR A . n A 1 162 GLY 162 177 177 GLY GLY A . n A 1 163 ARG 163 178 178 ARG ARG A . n A 1 164 ILE 164 179 179 ILE ILE A . n A 1 165 GLY 165 180 180 GLY GLY A . n A 1 166 LEU 166 181 181 LEU LEU A . n A 1 167 ASN 167 182 182 ASN ASN A . n A 1 168 PRO 168 183 183 PRO PRO A . n A 1 169 THR 169 184 184 THR THR A . n A 1 170 GLY 170 185 185 GLY GLY A . n A 1 171 ARG 171 186 186 ARG ARG A . n A 1 172 GLN 172 187 187 GLN GLN A . n A 1 173 ASN 173 188 188 ASN ASN A . n A 1 174 PHE 174 189 189 PHE PHE A . n A 1 175 LEU 175 190 190 LEU LEU A . n A 1 176 ALA 176 191 191 ALA ALA A . n A 1 177 THR 177 192 192 THR THR A . n A 1 178 ASP 178 193 193 ASP ASP A . n A 1 179 ALA 179 194 194 ALA ALA A . n A 1 180 SER 180 195 195 SER SER A . n A 1 181 ILE 181 196 196 ILE ILE A . n A 1 182 ASN 182 197 197 ASN ASN A . n A 1 183 HIS 183 198 198 HIS HIS A . n A 1 184 GLY 184 199 199 GLY GLY A . n A 1 185 ASN 185 200 200 ASN ASN A . n A 1 186 SER 186 201 201 SER SER A . n A 1 187 GLY 187 202 202 GLY GLY A . n A 1 188 GLY 188 203 203 GLY GLY A . n A 1 189 ALA 189 204 204 ALA ALA A . n A 1 190 LEU 190 205 205 LEU LEU A . n A 1 191 VAL 191 206 206 VAL VAL A . n A 1 192 ASN 192 207 207 ASN ASN A . n A 1 193 SER 193 208 208 SER SER A . n A 1 194 LEU 194 209 209 LEU LEU A . n A 1 195 GLY 195 210 210 GLY GLY A . n A 1 196 GLU 196 211 211 GLU GLU A . n A 1 197 LEU 197 212 212 LEU LEU A . n A 1 198 MET 198 213 213 MET MET A . n A 1 199 GLY 199 214 214 GLY GLY A . n A 1 200 ILE 200 215 215 ILE ILE A . n A 1 201 ASN 201 216 216 ASN ASN A . n A 1 202 THR 202 217 217 THR THR A . n A 1 203 LEU 203 218 218 LEU LEU A . n A 1 204 SER 204 219 219 SER SER A . n A 1 205 PHE 205 220 ? ? ? A . n A 1 206 ASP 206 221 ? ? ? A . n A 1 207 LYS 207 222 ? ? ? A . n A 1 208 SER 208 223 ? ? ? A . n A 1 209 ASN 209 224 ? ? ? A . n A 1 210 ASP 210 225 ? ? ? A . n A 1 211 GLY 211 226 ? ? ? A . n A 1 212 GLU 212 227 ? ? ? A . n A 1 213 THR 213 228 ? ? ? A . n A 1 214 PRO 214 229 229 PRO PRO A . n A 1 215 GLU 215 230 230 GLU GLU A . n A 1 216 GLY 216 231 231 GLY GLY A . n A 1 217 ILE 217 232 232 ILE ILE A . n A 1 218 GLY 218 233 233 GLY GLY A . n A 1 219 PHE 219 234 234 PHE PHE A . n A 1 220 ALA 220 235 235 ALA ALA A . n A 1 221 ILE 221 236 236 ILE ILE A . n A 1 222 PRO 222 237 237 PRO PRO A . n A 1 223 PHE 223 238 238 PHE PHE A . n A 1 224 GLN 224 239 239 GLN GLN A . n A 1 225 LEU 225 240 240 LEU LEU A . n A 1 226 ALA 226 241 241 ALA ALA A . n A 1 227 THR 227 242 242 THR THR A . n A 1 228 LYS 228 243 243 LYS LYS A . n A 1 229 ILE 229 244 244 ILE ILE A . n A 1 230 MET 230 245 245 MET MET A . n A 1 231 ASP 231 246 246 ASP ASP A . n A 1 232 LYS 232 247 247 LYS LYS A . n A 1 233 LEU 233 248 248 LEU LEU A . n A 1 234 ILE 234 249 249 ILE ILE A . n A 1 235 ARG 235 250 250 ARG ARG A . n A 1 236 ASP 236 251 251 ASP ASP A . n A 1 237 GLY 237 252 252 GLY GLY A . n A 1 238 ARG 238 253 253 ARG ARG A . n A 1 239 VAL 239 254 254 VAL VAL A . n A 1 240 ILE 240 255 255 ILE ILE A . n A 1 241 ARG 241 256 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 1 1 HOH HOH A . B 2 HOH 2 2 2 HOH HOH A . B 2 HOH 3 3 3 HOH HOH A . B 2 HOH 4 4 4 HOH HOH A . B 2 HOH 5 5 5 HOH HOH A . B 2 HOH 6 6 6 HOH HOH A . B 2 HOH 7 7 7 HOH HOH A . B 2 HOH 8 8 8 HOH HOH A . B 2 HOH 9 9 9 HOH HOH A . B 2 HOH 10 10 10 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A SER 39 ? OG ? A SER 24 OG 2 1 Y 1 A ASP 41 ? CG ? A ASP 26 CG 3 1 Y 1 A ASP 41 ? OD1 ? A ASP 26 OD1 4 1 Y 1 A ASP 41 ? OD2 ? A ASP 26 OD2 5 1 Y 1 A LEU 66 ? CG ? A LEU 51 CG 6 1 Y 1 A LEU 66 ? CD1 ? A LEU 51 CD1 7 1 Y 1 A LEU 66 ? CD2 ? A LEU 51 CD2 8 1 Y 1 A ASP 102 ? CG ? A ASP 87 CG 9 1 Y 1 A ASP 102 ? OD1 ? A ASP 87 OD1 10 1 Y 1 A ASP 102 ? OD2 ? A ASP 87 OD2 11 1 Y 1 A THR 167 ? O ? A THR 152 O 12 1 Y 1 A ARG 178 ? CG ? A ARG 163 CG 13 1 Y 1 A ARG 178 ? CD ? A ARG 163 CD 14 1 Y 1 A ARG 178 ? NE ? A ARG 163 NE 15 1 Y 1 A ARG 178 ? CZ ? A ARG 163 CZ 16 1 Y 1 A ARG 178 ? NH1 ? A ARG 163 NH1 17 1 Y 1 A ARG 178 ? NH2 ? A ARG 163 NH2 18 1 Y 1 A ARG 186 ? CG ? A ARG 171 CG 19 1 Y 1 A ARG 186 ? CD ? A ARG 171 CD 20 1 Y 1 A ARG 186 ? NE ? A ARG 171 NE 21 1 Y 1 A ARG 186 ? CZ ? A ARG 171 CZ 22 1 Y 1 A ARG 186 ? NH1 ? A ARG 171 NH1 23 1 Y 1 A ARG 186 ? NH2 ? A ARG 171 NH2 24 1 Y 1 A HIS 198 ? CG ? A HIS 183 CG 25 1 Y 1 A HIS 198 ? ND1 ? A HIS 183 ND1 26 1 Y 1 A HIS 198 ? CD2 ? A HIS 183 CD2 27 1 Y 1 A HIS 198 ? CE1 ? A HIS 183 CE1 28 1 Y 1 A HIS 198 ? NE2 ? A HIS 183 NE2 29 1 Y 1 A GLU 230 ? CG ? A GLU 215 CG 30 1 Y 1 A GLU 230 ? CD ? A GLU 215 CD 31 1 Y 1 A GLU 230 ? OE1 ? A GLU 215 OE1 32 1 Y 1 A GLU 230 ? OE2 ? A GLU 215 OE2 33 1 Y 1 A LYS 247 ? CG ? A LYS 232 CG 34 1 Y 1 A LYS 247 ? CD ? A LYS 232 CD 35 1 Y 1 A LYS 247 ? CE ? A LYS 232 CE 36 1 Y 1 A LYS 247 ? NZ ? A LYS 232 NZ 37 1 Y 1 A ILE 255 ? CG1 ? A ILE 240 CG1 38 1 Y 1 A ILE 255 ? CG2 ? A ILE 240 CG2 39 1 Y 1 A ILE 255 ? CD1 ? A ILE 240 CD1 # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 4 PHENIX 1.5_2 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 5 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 ADSC Quantum ? ? ? ? 'data collection' ? ? ? # _cell.length_a 70.892 _cell.length_b 70.892 _cell.length_c 120.837 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 3LH1 _cell.pdbx_unique_axis ? _cell.Z_PDB 9 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'H 3' _symmetry.entry_id 3LH1 _symmetry.Int_Tables_number 146 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 3LH1 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.26 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 45.62 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '50 mM Sodium Cacodylate, 50-125 mM Sodium Citrate, 10-20 % isopropanol, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2007-08-06 _diffrn_detector.details 'crystal monochrometer' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97949 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.pdbx_wavelength_list 0.97949 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 24-ID-C # _reflns.entry_id 3LH1 _reflns.d_resolution_high 2.500 _reflns.d_resolution_low 50.000 _reflns.number_obs 6682 _reflns.pdbx_Rmerge_I_obs 0.058 _reflns.pdbx_netI_over_sigmaI 13.300 _reflns.pdbx_chi_squared 1.695 _reflns.pdbx_redundancy 7.100 _reflns.percent_possible_obs 85.900 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 2.50 2.59 ? ? ? 0.163 ? ? 0.573 5.50 ? 419 54.00 ? 1 2.59 2.69 ? ? ? 0.202 ? ? 4.454 5.70 ? 479 63.20 ? 2 2.69 2.82 ? ? ? 0.129 ? ? 0.626 6.00 ? 565 71.20 ? 3 2.82 2.96 ? ? ? 0.100 ? ? 0.733 6.20 ? 628 80.90 ? 4 2.96 3.15 ? ? ? 0.078 ? ? 0.783 6.60 ? 699 90.70 ? 5 3.15 3.39 ? ? ? 0.074 ? ? 0.927 7.40 ? 794 100.00 ? 6 3.39 3.73 ? ? ? 0.084 ? ? 2.350 7.90 ? 773 100.00 ? 7 3.73 4.27 ? ? ? 0.065 ? ? 2.053 8.10 ? 770 100.00 ? 8 4.27 5.38 ? ? ? 0.047 ? ? 1.937 7.90 ? 785 100.00 ? 9 5.38 50.00 ? ? ? 0.043 ? ? 2.238 7.90 ? 770 98.50 ? 10 # _refine.entry_id 3LH1 _refine.ls_d_res_high 2.507 _refine.ls_d_res_low 27.367 _refine.pdbx_ls_sigma_F 1.97 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 85.440 _refine.ls_number_reflns_obs 6637 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details ? _refine.details ;To obtain the best possible geometry, this structure was refined with hydrogens whose coordinates were determined by the attached heavy atom. Authors state that although hydrogens cannot be visualized at this resolution, they are present and contribute to scattering. The hydrogens are kept in this entry because independent assessment of many aspects of the geometry, including steric clashes, require their presence. Moreover, removing hydrogen atoms after refinement makes independent assessment of refinement statistics effectively irreproducible. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.225 _refine.ls_R_factor_R_work 0.222 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.258 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 9.690 _refine.ls_number_reflns_R_free 643 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 88.968 _refine.solvent_model_param_bsol 59.956 _refine.solvent_model_param_ksol 0.352 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -32.242 _refine.aniso_B[2][2] -32.242 _refine.aniso_B[3][3] 64.484 _refine.aniso_B[1][2] -0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] -0.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.320 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.110 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.900 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.707 _refine.B_iso_max 184.51 _refine.B_iso_min 45.54 _refine.occupancy_max 1.00 _refine.occupancy_min 0.50 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1431 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 10 _refine_hist.number_atoms_total 1441 _refine_hist.d_res_high 2.507 _refine_hist.d_res_low 27.367 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 1445 0.005 ? ? 'X-RAY DIFFRACTION' ? f_angle_d 1964 0.825 ? ? 'X-RAY DIFFRACTION' ? f_chiral_restr 247 0.041 ? ? 'X-RAY DIFFRACTION' ? f_plane_restr 255 0.005 ? ? 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 512 13.931 ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 2.507 2.700 5 59.000 818 . 0.295 0.360 . 87 . 905 . . 'X-RAY DIFFRACTION' 2.700 2.971 5 76.000 1066 . 0.255 0.305 . 125 . 1191 . . 'X-RAY DIFFRACTION' 2.971 3.401 5 95.000 1353 . 0.234 0.276 . 133 . 1486 . . 'X-RAY DIFFRACTION' 3.401 4.282 5 97.000 1350 . 0.213 0.279 . 148 . 1498 . . 'X-RAY DIFFRACTION' 4.282 27.369 5 99.000 1407 . 0.203 0.207 . 150 . 1557 . . 'X-RAY DIFFRACTION' # _struct.entry_id 3LH1 _struct.title 'Q191A mutant of the DegS-deltaPDZ' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3LH1 _struct_keywords.text 'protease, stress-sensor, HtrA, PDZ OMP, Hydrolase, Serine protease' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DEGS_ECOLI _struct_ref.pdbx_db_accession P0AEE3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;RSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIV ALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGR QNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIR ; _struct_ref.pdbx_align_begin 27 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3LH1 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 12 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 241 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P0AEE3 _struct_ref_seq.db_align_beg 27 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 256 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 27 _struct_ref_seq.pdbx_auth_seq_align_end 256 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3LH1 MET A 1 ? UNP P0AEE3 ? ? 'expression tag' 16 1 1 3LH1 ARG A 2 ? UNP P0AEE3 ? ? 'expression tag' 17 2 1 3LH1 GLY A 3 ? UNP P0AEE3 ? ? 'expression tag' 18 3 1 3LH1 SER A 4 ? UNP P0AEE3 ? ? 'expression tag' 19 4 1 3LH1 HIS A 5 ? UNP P0AEE3 ? ? 'expression tag' 20 5 1 3LH1 HIS A 6 ? UNP P0AEE3 ? ? 'expression tag' 21 6 1 3LH1 HIS A 7 ? UNP P0AEE3 ? ? 'expression tag' 22 7 1 3LH1 HIS A 8 ? UNP P0AEE3 ? ? 'expression tag' 23 8 1 3LH1 HIS A 9 ? UNP P0AEE3 ? ? 'expression tag' 24 9 1 3LH1 HIS A 10 ? UNP P0AEE3 ? ? 'expression tag' 25 10 1 3LH1 GLY A 11 ? UNP P0AEE3 ? ? 'expression tag' 26 11 1 3LH1 ALA A 176 ? UNP P0AEE3 GLN 191 'engineered mutation' 191 12 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4870 ? 1 MORE -21 ? 1 'SSA (A^2)' 24820 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5000000000 -0.8660254038 0.0000000000 35.4460000000 0.8660254038 -0.5000000000 0.0000000000 61.3942729251 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_565 -x+y,-x+1,z -0.5000000000 0.8660254038 0.0000000000 -35.4460000000 -0.8660254038 -0.5000000000 0.0000000000 61.3942729251 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TYR A 32 ? ALA A 40 ? TYR A 47 ALA A 55 1 ? 9 HELX_P HELX_P2 2 PHE A 223 ? ASP A 236 ? PHE A 238 ASP A 251 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 43 ? GLY A 50 ? VAL A 58 GLY A 65 A 2 GLU A 60 ? ILE A 69 ? GLU A 75 ILE A 84 A 3 TYR A 75 ? ASN A 79 ? TYR A 90 ASN A 94 A 4 LEU A 112 ? LYS A 116 ? LEU A 127 LYS A 131 A 5 VAL A 98 ? ASP A 107 ? VAL A 113 ASP A 122 A 6 ILE A 89 ? ALA A 92 ? ILE A 104 ALA A 107 A 7 VAL A 43 ? GLY A 50 ? VAL A 58 GLY A 65 B 1 VAL A 139 ? ILE A 143 ? VAL A 154 ILE A 158 B 2 THR A 154 ? GLY A 162 ? THR A 169 GLY A 177 B 3 PHE A 174 ? THR A 177 ? PHE A 189 THR A 192 B 4 GLY A 218 ? PRO A 222 ? GLY A 233 PRO A 237 B 5 LEU A 197 ? THR A 202 ? LEU A 212 THR A 217 B 6 ALA A 189 ? VAL A 191 ? ALA A 204 VAL A 206 B 7 VAL A 139 ? ILE A 143 ? VAL A 154 ILE A 158 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 46 ? N VAL A 61 O GLY A 65 ? O GLY A 80 A 2 3 N VAL A 68 ? N VAL A 83 O ILE A 77 ? O ILE A 92 A 3 4 N ILE A 76 ? N ILE A 91 O LEU A 115 ? O LEU A 130 A 4 5 O VAL A 114 ? O VAL A 129 N GLY A 105 ? N GLY A 120 A 5 6 O PHE A 99 ? O PHE A 114 N VAL A 91 ? N VAL A 106 A 6 7 O ILE A 90 ? O ILE A 105 N TYR A 47 ? N TYR A 62 B 1 2 N ALA A 142 ? N ALA A 157 O THR A 154 ? O THR A 169 B 2 3 N ALA A 160 ? N ALA A 175 O ALA A 176 ? O ALA A 191 B 3 4 N THR A 177 ? N THR A 192 O GLY A 218 ? O GLY A 233 B 4 5 O PHE A 219 ? O PHE A 234 N THR A 202 ? N THR A 217 B 5 6 O MET A 198 ? O MET A 213 N LEU A 190 ? N LEU A 205 B 6 7 O VAL A 191 ? O VAL A 206 N LEU A 141 ? N LEU A 156 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 100 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -112.92 _pdbx_validate_torsion.psi 62.88 # _phasing.method MR # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 16 ? A MET 1 2 1 Y 1 A ARG 17 ? A ARG 2 3 1 Y 1 A GLY 18 ? A GLY 3 4 1 Y 1 A SER 19 ? A SER 4 5 1 Y 1 A HIS 20 ? A HIS 5 6 1 Y 1 A HIS 21 ? A HIS 6 7 1 Y 1 A HIS 22 ? A HIS 7 8 1 Y 1 A HIS 23 ? A HIS 8 9 1 Y 1 A HIS 24 ? A HIS 9 10 1 Y 1 A HIS 25 ? A HIS 10 11 1 Y 1 A GLY 26 ? A GLY 11 12 1 Y 1 A ARG 27 ? A ARG 12 13 1 Y 1 A SER 28 ? A SER 13 14 1 Y 1 A LEU 29 ? A LEU 14 15 1 Y 1 A ASN 30 ? A ASN 15 16 1 Y 1 A PRO 31 ? A PRO 16 17 1 Y 1 A LEU 32 ? A LEU 17 18 1 Y 1 A SER 33 ? A SER 18 19 1 Y 1 A THR 34 ? A THR 19 20 1 Y 1 A PRO 35 ? A PRO 20 21 1 Y 1 A GLN 36 ? A GLN 21 22 1 Y 1 A PHE 37 ? A PHE 22 23 1 Y 1 A ASP 38 ? A ASP 23 24 1 Y 1 A ASN 67 ? A ASN 52 25 1 Y 1 A THR 68 ? A THR 53 26 1 Y 1 A ASN 69 ? A ASN 54 27 1 Y 1 A SER 70 ? A SER 55 28 1 Y 1 A HIS 71 ? A HIS 56 29 1 Y 1 A ASN 72 ? A ASN 57 30 1 Y 1 A GLN 73 ? A GLN 58 31 1 Y 1 A TYR 162 ? A TYR 147 32 1 Y 1 A ASN 163 ? A ASN 148 33 1 Y 1 A PHE 220 ? A PHE 205 34 1 Y 1 A ASP 221 ? A ASP 206 35 1 Y 1 A LYS 222 ? A LYS 207 36 1 Y 1 A SER 223 ? A SER 208 37 1 Y 1 A ASN 224 ? A ASN 209 38 1 Y 1 A ASP 225 ? A ASP 210 39 1 Y 1 A GLY 226 ? A GLY 211 40 1 Y 1 A GLU 227 ? A GLU 212 41 1 Y 1 A THR 228 ? A THR 213 42 1 Y 1 A ARG 256 ? A ARG 241 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 PHE N N N N 236 PHE CA C N S 237 PHE C C N N 238 PHE O O N N 239 PHE CB C N N 240 PHE CG C Y N 241 PHE CD1 C Y N 242 PHE CD2 C Y N 243 PHE CE1 C Y N 244 PHE CE2 C Y N 245 PHE CZ C Y N 246 PHE OXT O N N 247 PHE H H N N 248 PHE H2 H N N 249 PHE HA H N N 250 PHE HB2 H N N 251 PHE HB3 H N N 252 PHE HD1 H N N 253 PHE HD2 H N N 254 PHE HE1 H N N 255 PHE HE2 H N N 256 PHE HZ H N N 257 PHE HXT H N N 258 PRO N N N N 259 PRO CA C N S 260 PRO C C N N 261 PRO O O N N 262 PRO CB C N N 263 PRO CG C N N 264 PRO CD C N N 265 PRO OXT O N N 266 PRO H H N N 267 PRO HA H N N 268 PRO HB2 H N N 269 PRO HB3 H N N 270 PRO HG2 H N N 271 PRO HG3 H N N 272 PRO HD2 H N N 273 PRO HD3 H N N 274 PRO HXT H N N 275 SER N N N N 276 SER CA C N S 277 SER C C N N 278 SER O O N N 279 SER CB C N N 280 SER OG O N N 281 SER OXT O N N 282 SER H H N N 283 SER H2 H N N 284 SER HA H N N 285 SER HB2 H N N 286 SER HB3 H N N 287 SER HG H N N 288 SER HXT H N N 289 THR N N N N 290 THR CA C N S 291 THR C C N N 292 THR O O N N 293 THR CB C N R 294 THR OG1 O N N 295 THR CG2 C N N 296 THR OXT O N N 297 THR H H N N 298 THR H2 H N N 299 THR HA H N N 300 THR HB H N N 301 THR HG1 H N N 302 THR HG21 H N N 303 THR HG22 H N N 304 THR HG23 H N N 305 THR HXT H N N 306 TYR N N N N 307 TYR CA C N S 308 TYR C C N N 309 TYR O O N N 310 TYR CB C N N 311 TYR CG C Y N 312 TYR CD1 C Y N 313 TYR CD2 C Y N 314 TYR CE1 C Y N 315 TYR CE2 C Y N 316 TYR CZ C Y N 317 TYR OH O N N 318 TYR OXT O N N 319 TYR H H N N 320 TYR H2 H N N 321 TYR HA H N N 322 TYR HB2 H N N 323 TYR HB3 H N N 324 TYR HD1 H N N 325 TYR HD2 H N N 326 TYR HE1 H N N 327 TYR HE2 H N N 328 TYR HH H N N 329 TYR HXT H N N 330 VAL N N N N 331 VAL CA C N S 332 VAL C C N N 333 VAL O O N N 334 VAL CB C N N 335 VAL CG1 C N N 336 VAL CG2 C N N 337 VAL OXT O N N 338 VAL H H N N 339 VAL H2 H N N 340 VAL HA H N N 341 VAL HB H N N 342 VAL HG11 H N N 343 VAL HG12 H N N 344 VAL HG13 H N N 345 VAL HG21 H N N 346 VAL HG22 H N N 347 VAL HG23 H N N 348 VAL HXT H N N 349 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 THR N CA sing N N 277 THR N H sing N N 278 THR N H2 sing N N 279 THR CA C sing N N 280 THR CA CB sing N N 281 THR CA HA sing N N 282 THR C O doub N N 283 THR C OXT sing N N 284 THR CB OG1 sing N N 285 THR CB CG2 sing N N 286 THR CB HB sing N N 287 THR OG1 HG1 sing N N 288 THR CG2 HG21 sing N N 289 THR CG2 HG22 sing N N 290 THR CG2 HG23 sing N N 291 THR OXT HXT sing N N 292 TYR N CA sing N N 293 TYR N H sing N N 294 TYR N H2 sing N N 295 TYR CA C sing N N 296 TYR CA CB sing N N 297 TYR CA HA sing N N 298 TYR C O doub N N 299 TYR C OXT sing N N 300 TYR CB CG sing N N 301 TYR CB HB2 sing N N 302 TYR CB HB3 sing N N 303 TYR CG CD1 doub Y N 304 TYR CG CD2 sing Y N 305 TYR CD1 CE1 sing Y N 306 TYR CD1 HD1 sing N N 307 TYR CD2 CE2 doub Y N 308 TYR CD2 HD2 sing N N 309 TYR CE1 CZ doub Y N 310 TYR CE1 HE1 sing N N 311 TYR CE2 CZ sing Y N 312 TYR CE2 HE2 sing N N 313 TYR CZ OH sing N N 314 TYR OH HH sing N N 315 TYR OXT HXT sing N N 316 VAL N CA sing N N 317 VAL N H sing N N 318 VAL N H2 sing N N 319 VAL CA C sing N N 320 VAL CA CB sing N N 321 VAL CA HA sing N N 322 VAL C O doub N N 323 VAL C OXT sing N N 324 VAL CB CG1 sing N N 325 VAL CB CG2 sing N N 326 VAL CB HB sing N N 327 VAL CG1 HG11 sing N N 328 VAL CG1 HG12 sing N N 329 VAL CG1 HG13 sing N N 330 VAL CG2 HG21 sing N N 331 VAL CG2 HG22 sing N N 332 VAL CG2 HG23 sing N N 333 VAL OXT HXT sing N N 334 # _atom_sites.entry_id 3LH1 _atom_sites.fract_transf_matrix[1][1] 0.014106 _atom_sites.fract_transf_matrix[1][2] 0.008144 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016288 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008276 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C H N O S # loop_