data_3LH5 # _entry.id 3LH5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3LH5 pdb_00003lh5 10.2210/pdb3lh5/pdb RCSB RCSB057272 ? ? WWPDB D_1000057272 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-03-02 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-08-23 4 'Structure model' 1 3 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 3 'Structure model' 'Source and taxonomy' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' entity_src_gen 2 3 'Structure model' software 3 4 'Structure model' chem_comp_atom 4 4 'Structure model' chem_comp_bond 5 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.entry_id 3LH5 _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-01-21 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lye, M.F.' 1 'Lavie, A.' 2 # _citation.id primary _citation.title 'Insights into regulated ligand binding sites from the structure of ZO-1 Src homology 3-guanylate kinase module.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 285 _citation.page_first 13907 _citation.page_last 13917 _citation.year 2010 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20200156 _citation.pdbx_database_id_DOI 10.1074/jbc.M109.093674 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lye, M.F.' 1 ? primary 'Fanning, A.S.' 2 ? primary 'Su, Y.' 3 ? primary 'Anderson, J.M.' 4 ? primary 'Lavie, A.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Tight junction protein ZO-1' 29047.043 1 ? ? 'UNP residues 516-588, 626-803' ? 2 water nat water 18.015 73 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Zonula occludens protein 1, Zona occludens protein 1, Tight junction protein 1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GDSFYIRTHFEYEKESPYGLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNKNRAEQLASVQYVQTKFPA YERVVLREAGFLRPVTIFGPIADVAREKLAREEPDIYQIAKSEPRDAGTDQRSSGIIRLHTIKQIIDQDKHALLDVTPNA VDRLNYAQWYPIVVFLNPDSKQGVKTMRMRLCPESRKSARKLYERSHKLRKNNHHLFTTTINLNSMNDGWYGALKEAIQQ QQNQLVWVSEG ; _entity_poly.pdbx_seq_one_letter_code_can ;GDSFYIRTHFEYEKESPYGLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNKNRAEQLASVQYVQTKFPA YERVVLREAGFLRPVTIFGPIADVAREKLAREEPDIYQIAKSEPRDAGTDQRSSGIIRLHTIKQIIDQDKHALLDVTPNA VDRLNYAQWYPIVVFLNPDSKQGVKTMRMRLCPESRKSARKLYERSHKLRKNNHHLFTTTINLNSMNDGWYGALKEAIQQ QQNQLVWVSEG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ASP n 1 3 SER n 1 4 PHE n 1 5 TYR n 1 6 ILE n 1 7 ARG n 1 8 THR n 1 9 HIS n 1 10 PHE n 1 11 GLU n 1 12 TYR n 1 13 GLU n 1 14 LYS n 1 15 GLU n 1 16 SER n 1 17 PRO n 1 18 TYR n 1 19 GLY n 1 20 LEU n 1 21 SER n 1 22 PHE n 1 23 ASN n 1 24 LYS n 1 25 GLY n 1 26 GLU n 1 27 VAL n 1 28 PHE n 1 29 ARG n 1 30 VAL n 1 31 VAL n 1 32 ASP n 1 33 THR n 1 34 LEU n 1 35 TYR n 1 36 ASN n 1 37 GLY n 1 38 LYS n 1 39 LEU n 1 40 GLY n 1 41 SER n 1 42 TRP n 1 43 LEU n 1 44 ALA n 1 45 ILE n 1 46 ARG n 1 47 ILE n 1 48 GLY n 1 49 LYS n 1 50 ASN n 1 51 HIS n 1 52 LYS n 1 53 GLU n 1 54 VAL n 1 55 GLU n 1 56 ARG n 1 57 GLY n 1 58 ILE n 1 59 ILE n 1 60 PRO n 1 61 ASN n 1 62 LYS n 1 63 ASN n 1 64 ARG n 1 65 ALA n 1 66 GLU n 1 67 GLN n 1 68 LEU n 1 69 ALA n 1 70 SER n 1 71 VAL n 1 72 GLN n 1 73 TYR n 1 74 VAL n 1 75 GLN n 1 76 THR n 1 77 LYS n 1 78 PHE n 1 79 PRO n 1 80 ALA n 1 81 TYR n 1 82 GLU n 1 83 ARG n 1 84 VAL n 1 85 VAL n 1 86 LEU n 1 87 ARG n 1 88 GLU n 1 89 ALA n 1 90 GLY n 1 91 PHE n 1 92 LEU n 1 93 ARG n 1 94 PRO n 1 95 VAL n 1 96 THR n 1 97 ILE n 1 98 PHE n 1 99 GLY n 1 100 PRO n 1 101 ILE n 1 102 ALA n 1 103 ASP n 1 104 VAL n 1 105 ALA n 1 106 ARG n 1 107 GLU n 1 108 LYS n 1 109 LEU n 1 110 ALA n 1 111 ARG n 1 112 GLU n 1 113 GLU n 1 114 PRO n 1 115 ASP n 1 116 ILE n 1 117 TYR n 1 118 GLN n 1 119 ILE n 1 120 ALA n 1 121 LYS n 1 122 SER n 1 123 GLU n 1 124 PRO n 1 125 ARG n 1 126 ASP n 1 127 ALA n 1 128 GLY n 1 129 THR n 1 130 ASP n 1 131 GLN n 1 132 ARG n 1 133 SER n 1 134 SER n 1 135 GLY n 1 136 ILE n 1 137 ILE n 1 138 ARG n 1 139 LEU n 1 140 HIS n 1 141 THR n 1 142 ILE n 1 143 LYS n 1 144 GLN n 1 145 ILE n 1 146 ILE n 1 147 ASP n 1 148 GLN n 1 149 ASP n 1 150 LYS n 1 151 HIS n 1 152 ALA n 1 153 LEU n 1 154 LEU n 1 155 ASP n 1 156 VAL n 1 157 THR n 1 158 PRO n 1 159 ASN n 1 160 ALA n 1 161 VAL n 1 162 ASP n 1 163 ARG n 1 164 LEU n 1 165 ASN n 1 166 TYR n 1 167 ALA n 1 168 GLN n 1 169 TRP n 1 170 TYR n 1 171 PRO n 1 172 ILE n 1 173 VAL n 1 174 VAL n 1 175 PHE n 1 176 LEU n 1 177 ASN n 1 178 PRO n 1 179 ASP n 1 180 SER n 1 181 LYS n 1 182 GLN n 1 183 GLY n 1 184 VAL n 1 185 LYS n 1 186 THR n 1 187 MET n 1 188 ARG n 1 189 MET n 1 190 ARG n 1 191 LEU n 1 192 CYS n 1 193 PRO n 1 194 GLU n 1 195 SER n 1 196 ARG n 1 197 LYS n 1 198 SER n 1 199 ALA n 1 200 ARG n 1 201 LYS n 1 202 LEU n 1 203 TYR n 1 204 GLU n 1 205 ARG n 1 206 SER n 1 207 HIS n 1 208 LYS n 1 209 LEU n 1 210 ARG n 1 211 LYS n 1 212 ASN n 1 213 ASN n 1 214 HIS n 1 215 HIS n 1 216 LEU n 1 217 PHE n 1 218 THR n 1 219 THR n 1 220 THR n 1 221 ILE n 1 222 ASN n 1 223 LEU n 1 224 ASN n 1 225 SER n 1 226 MET n 1 227 ASN n 1 228 ASP n 1 229 GLY n 1 230 TRP n 1 231 TYR n 1 232 GLY n 1 233 ALA n 1 234 LEU n 1 235 LYS n 1 236 GLU n 1 237 ALA n 1 238 ILE n 1 239 GLN n 1 240 GLN n 1 241 GLN n 1 242 GLN n 1 243 ASN n 1 244 GLN n 1 245 LEU n 1 246 VAL n 1 247 TRP n 1 248 VAL n 1 249 SER n 1 250 GLU n 1 251 GLY n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? 1 73 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? 'BL21 (DE3)' ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1 2 sample ? 74 251 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? 'BL21 (DE3)' ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 516 516 GLY GLY A . n A 1 2 ASP 2 517 517 ASP ASP A . n A 1 3 SER 3 518 518 SER SER A . n A 1 4 PHE 4 519 519 PHE PHE A . n A 1 5 TYR 5 520 520 TYR TYR A . n A 1 6 ILE 6 521 521 ILE ILE A . n A 1 7 ARG 7 522 522 ARG ARG A . n A 1 8 THR 8 523 523 THR THR A . n A 1 9 HIS 9 524 524 HIS HIS A . n A 1 10 PHE 10 525 525 PHE PHE A . n A 1 11 GLU 11 526 526 GLU GLU A . n A 1 12 TYR 12 527 527 TYR TYR A . n A 1 13 GLU 13 528 528 GLU GLU A . n A 1 14 LYS 14 529 529 LYS LYS A . n A 1 15 GLU 15 530 530 GLU GLU A . n A 1 16 SER 16 531 531 SER SER A . n A 1 17 PRO 17 532 532 PRO PRO A . n A 1 18 TYR 18 533 533 TYR TYR A . n A 1 19 GLY 19 534 534 GLY GLY A . n A 1 20 LEU 20 535 535 LEU LEU A . n A 1 21 SER 21 536 536 SER SER A . n A 1 22 PHE 22 537 537 PHE PHE A . n A 1 23 ASN 23 538 538 ASN ASN A . n A 1 24 LYS 24 539 539 LYS LYS A . n A 1 25 GLY 25 540 540 GLY GLY A . n A 1 26 GLU 26 541 541 GLU GLU A . n A 1 27 VAL 27 542 542 VAL VAL A . n A 1 28 PHE 28 543 543 PHE PHE A . n A 1 29 ARG 29 544 544 ARG ARG A . n A 1 30 VAL 30 545 545 VAL VAL A . n A 1 31 VAL 31 546 546 VAL VAL A . n A 1 32 ASP 32 547 547 ASP ASP A . n A 1 33 THR 33 548 548 THR THR A . n A 1 34 LEU 34 549 549 LEU LEU A . n A 1 35 TYR 35 550 550 TYR TYR A . n A 1 36 ASN 36 551 551 ASN ASN A . n A 1 37 GLY 37 552 552 GLY GLY A . n A 1 38 LYS 38 553 553 LYS LYS A . n A 1 39 LEU 39 554 554 LEU LEU A . n A 1 40 GLY 40 555 555 GLY GLY A . n A 1 41 SER 41 556 556 SER SER A . n A 1 42 TRP 42 557 557 TRP TRP A . n A 1 43 LEU 43 558 558 LEU LEU A . n A 1 44 ALA 44 559 559 ALA ALA A . n A 1 45 ILE 45 560 560 ILE ILE A . n A 1 46 ARG 46 561 561 ARG ARG A . n A 1 47 ILE 47 562 562 ILE ILE A . n A 1 48 GLY 48 563 563 GLY GLY A . n A 1 49 LYS 49 564 564 LYS LYS A . n A 1 50 ASN 50 565 565 ASN ASN A . n A 1 51 HIS 51 566 566 HIS HIS A . n A 1 52 LYS 52 567 567 LYS LYS A . n A 1 53 GLU 53 568 568 GLU GLU A . n A 1 54 VAL 54 569 569 VAL VAL A . n A 1 55 GLU 55 570 570 GLU GLU A . n A 1 56 ARG 56 571 571 ARG ARG A . n A 1 57 GLY 57 572 572 GLY GLY A . n A 1 58 ILE 58 573 573 ILE ILE A . n A 1 59 ILE 59 574 574 ILE ILE A . n A 1 60 PRO 60 575 575 PRO PRO A . n A 1 61 ASN 61 576 576 ASN ASN A . n A 1 62 LYS 62 577 577 LYS LYS A . n A 1 63 ASN 63 578 578 ASN ASN A . n A 1 64 ARG 64 579 579 ARG ARG A . n A 1 65 ALA 65 580 580 ALA ALA A . n A 1 66 GLU 66 581 581 GLU GLU A . n A 1 67 GLN 67 582 582 GLN GLN A . n A 1 68 LEU 68 583 583 LEU LEU A . n A 1 69 ALA 69 584 584 ALA ALA A . n A 1 70 SER 70 585 585 SER SER A . n A 1 71 VAL 71 586 586 VAL VAL A . n A 1 72 GLN 72 587 587 GLN GLN A . n A 1 73 TYR 73 588 588 TYR TYR A . n A 1 74 VAL 74 626 626 VAL VAL A . n A 1 75 GLN 75 627 627 GLN GLN A . n A 1 76 THR 76 628 628 THR THR A . n A 1 77 LYS 77 629 629 LYS LYS A . n A 1 78 PHE 78 630 630 PHE PHE A . n A 1 79 PRO 79 631 631 PRO PRO A . n A 1 80 ALA 80 632 632 ALA ALA A . n A 1 81 TYR 81 633 633 TYR TYR A . n A 1 82 GLU 82 634 634 GLU GLU A . n A 1 83 ARG 83 635 635 ARG ARG A . n A 1 84 VAL 84 636 636 VAL VAL A . n A 1 85 VAL 85 637 637 VAL VAL A . n A 1 86 LEU 86 638 638 LEU LEU A . n A 1 87 ARG 87 639 639 ARG ARG A . n A 1 88 GLU 88 640 640 GLU GLU A . n A 1 89 ALA 89 641 641 ALA ALA A . n A 1 90 GLY 90 642 642 GLY GLY A . n A 1 91 PHE 91 643 643 PHE PHE A . n A 1 92 LEU 92 644 644 LEU LEU A . n A 1 93 ARG 93 645 645 ARG ARG A . n A 1 94 PRO 94 646 646 PRO PRO A . n A 1 95 VAL 95 647 647 VAL VAL A . n A 1 96 THR 96 648 648 THR THR A . n A 1 97 ILE 97 649 649 ILE ILE A . n A 1 98 PHE 98 650 650 PHE PHE A . n A 1 99 GLY 99 651 651 GLY GLY A . n A 1 100 PRO 100 652 652 PRO PRO A . n A 1 101 ILE 101 653 653 ILE ILE A . n A 1 102 ALA 102 654 654 ALA ALA A . n A 1 103 ASP 103 655 655 ASP ASP A . n A 1 104 VAL 104 656 656 VAL VAL A . n A 1 105 ALA 105 657 657 ALA ALA A . n A 1 106 ARG 106 658 658 ARG ARG A . n A 1 107 GLU 107 659 659 GLU GLU A . n A 1 108 LYS 108 660 660 LYS LYS A . n A 1 109 LEU 109 661 661 LEU LEU A . n A 1 110 ALA 110 662 662 ALA ALA A . n A 1 111 ARG 111 663 663 ARG ARG A . n A 1 112 GLU 112 664 664 GLU GLU A . n A 1 113 GLU 113 665 665 GLU GLU A . n A 1 114 PRO 114 666 666 PRO PRO A . n A 1 115 ASP 115 667 667 ASP ASP A . n A 1 116 ILE 116 668 668 ILE ILE A . n A 1 117 TYR 117 669 669 TYR TYR A . n A 1 118 GLN 118 670 670 GLN GLN A . n A 1 119 ILE 119 671 671 ILE ILE A . n A 1 120 ALA 120 672 672 ALA ALA A . n A 1 121 LYS 121 673 673 LYS LYS A . n A 1 122 SER 122 674 674 SER SER A . n A 1 123 GLU 123 675 675 GLU GLU A . n A 1 124 PRO 124 676 676 PRO PRO A . n A 1 125 ARG 125 677 677 ARG ARG A . n A 1 126 ASP 126 678 678 ASP ASP A . n A 1 127 ALA 127 679 679 ALA ALA A . n A 1 128 GLY 128 680 680 GLY GLY A . n A 1 129 THR 129 681 681 THR THR A . n A 1 130 ASP 130 682 682 ASP ASP A . n A 1 131 GLN 131 683 683 GLN GLN A . n A 1 132 ARG 132 684 ? ? ? A . n A 1 133 SER 133 685 ? ? ? A . n A 1 134 SER 134 686 ? ? ? A . n A 1 135 GLY 135 687 687 GLY GLY A . n A 1 136 ILE 136 688 688 ILE ILE A . n A 1 137 ILE 137 689 689 ILE ILE A . n A 1 138 ARG 138 690 690 ARG ARG A . n A 1 139 LEU 139 691 691 LEU LEU A . n A 1 140 HIS 140 692 692 HIS HIS A . n A 1 141 THR 141 693 693 THR THR A . n A 1 142 ILE 142 694 694 ILE ILE A . n A 1 143 LYS 143 695 695 LYS LYS A . n A 1 144 GLN 144 696 696 GLN GLN A . n A 1 145 ILE 145 697 697 ILE ILE A . n A 1 146 ILE 146 698 698 ILE ILE A . n A 1 147 ASP 147 699 699 ASP ASP A . n A 1 148 GLN 148 700 700 GLN GLN A . n A 1 149 ASP 149 701 701 ASP ASP A . n A 1 150 LYS 150 702 702 LYS LYS A . n A 1 151 HIS 151 703 703 HIS HIS A . n A 1 152 ALA 152 704 704 ALA ALA A . n A 1 153 LEU 153 705 705 LEU LEU A . n A 1 154 LEU 154 706 706 LEU LEU A . n A 1 155 ASP 155 707 707 ASP ASP A . n A 1 156 VAL 156 708 708 VAL VAL A . n A 1 157 THR 157 709 709 THR THR A . n A 1 158 PRO 158 710 710 PRO PRO A . n A 1 159 ASN 159 711 711 ASN ASN A . n A 1 160 ALA 160 712 712 ALA ALA A . n A 1 161 VAL 161 713 713 VAL VAL A . n A 1 162 ASP 162 714 714 ASP ASP A . n A 1 163 ARG 163 715 715 ARG ARG A . n A 1 164 LEU 164 716 716 LEU LEU A . n A 1 165 ASN 165 717 717 ASN ASN A . n A 1 166 TYR 166 718 718 TYR TYR A . n A 1 167 ALA 167 719 719 ALA ALA A . n A 1 168 GLN 168 720 720 GLN GLN A . n A 1 169 TRP 169 721 721 TRP TRP A . n A 1 170 TYR 170 722 722 TYR TYR A . n A 1 171 PRO 171 723 723 PRO PRO A . n A 1 172 ILE 172 724 724 ILE ILE A . n A 1 173 VAL 173 725 725 VAL VAL A . n A 1 174 VAL 174 726 726 VAL VAL A . n A 1 175 PHE 175 727 727 PHE PHE A . n A 1 176 LEU 176 728 728 LEU LEU A . n A 1 177 ASN 177 729 729 ASN ASN A . n A 1 178 PRO 178 730 730 PRO PRO A . n A 1 179 ASP 179 731 731 ASP ASP A . n A 1 180 SER 180 732 732 SER SER A . n A 1 181 LYS 181 733 733 LYS LYS A . n A 1 182 GLN 182 734 734 GLN GLN A . n A 1 183 GLY 183 735 735 GLY GLY A . n A 1 184 VAL 184 736 736 VAL VAL A . n A 1 185 LYS 185 737 737 LYS LYS A . n A 1 186 THR 186 738 738 THR THR A . n A 1 187 MET 187 739 739 MET MET A . n A 1 188 ARG 188 740 740 ARG ARG A . n A 1 189 MET 189 741 741 MET MET A . n A 1 190 ARG 190 742 742 ARG ARG A . n A 1 191 LEU 191 743 743 LEU LEU A . n A 1 192 CYS 192 744 744 CYS CYS A . n A 1 193 PRO 193 745 745 PRO PRO A . n A 1 194 GLU 194 746 746 GLU GLU A . n A 1 195 SER 195 747 747 SER SER A . n A 1 196 ARG 196 748 748 ARG ARG A . n A 1 197 LYS 197 749 749 LYS LYS A . n A 1 198 SER 198 750 750 SER SER A . n A 1 199 ALA 199 751 751 ALA ALA A . n A 1 200 ARG 200 752 752 ARG ARG A . n A 1 201 LYS 201 753 753 LYS LYS A . n A 1 202 LEU 202 754 754 LEU LEU A . n A 1 203 TYR 203 755 755 TYR TYR A . n A 1 204 GLU 204 756 756 GLU GLU A . n A 1 205 ARG 205 757 757 ARG ARG A . n A 1 206 SER 206 758 758 SER SER A . n A 1 207 HIS 207 759 759 HIS HIS A . n A 1 208 LYS 208 760 760 LYS LYS A . n A 1 209 LEU 209 761 761 LEU LEU A . n A 1 210 ARG 210 762 762 ARG ARG A . n A 1 211 LYS 211 763 763 LYS LYS A . n A 1 212 ASN 212 764 764 ASN ASN A . n A 1 213 ASN 213 765 765 ASN ASN A . n A 1 214 HIS 214 766 766 HIS HIS A . n A 1 215 HIS 215 767 767 HIS HIS A . n A 1 216 LEU 216 768 768 LEU LEU A . n A 1 217 PHE 217 769 769 PHE PHE A . n A 1 218 THR 218 770 770 THR THR A . n A 1 219 THR 219 771 771 THR THR A . n A 1 220 THR 220 772 772 THR THR A . n A 1 221 ILE 221 773 773 ILE ILE A . n A 1 222 ASN 222 774 774 ASN ASN A . n A 1 223 LEU 223 775 775 LEU LEU A . n A 1 224 ASN 224 776 776 ASN ASN A . n A 1 225 SER 225 777 777 SER SER A . n A 1 226 MET 226 778 778 MET MET A . n A 1 227 ASN 227 779 779 ASN ASN A . n A 1 228 ASP 228 780 780 ASP ASP A . n A 1 229 GLY 229 781 781 GLY GLY A . n A 1 230 TRP 230 782 782 TRP TRP A . n A 1 231 TYR 231 783 783 TYR TYR A . n A 1 232 GLY 232 784 784 GLY GLY A . n A 1 233 ALA 233 785 785 ALA ALA A . n A 1 234 LEU 234 786 786 LEU LEU A . n A 1 235 LYS 235 787 787 LYS LYS A . n A 1 236 GLU 236 788 788 GLU GLU A . n A 1 237 ALA 237 789 789 ALA ALA A . n A 1 238 ILE 238 790 790 ILE ILE A . n A 1 239 GLN 239 791 791 GLN GLN A . n A 1 240 GLN 240 792 792 GLN GLN A . n A 1 241 GLN 241 793 793 GLN GLN A . n A 1 242 GLN 242 794 794 GLN GLN A . n A 1 243 ASN 243 795 795 ASN ASN A . n A 1 244 GLN 244 796 796 GLN GLN A . n A 1 245 LEU 245 797 797 LEU LEU A . n A 1 246 VAL 246 798 798 VAL VAL A . n A 1 247 TRP 247 799 799 TRP TRP A . n A 1 248 VAL 248 800 800 VAL VAL A . n A 1 249 SER 249 801 801 SER SER A . n A 1 250 GLU 250 802 802 GLU GLU A . n A 1 251 GLY 251 803 803 GLY GLY A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 1 1 HOH HOH A . B 2 HOH 2 2 2 HOH HOH A . B 2 HOH 3 3 3 HOH HOH A . B 2 HOH 4 4 4 HOH HOH A . B 2 HOH 5 5 5 HOH HOH A . B 2 HOH 6 6 6 HOH HOH A . B 2 HOH 7 7 7 HOH HOH A . B 2 HOH 8 8 8 HOH HOH A . B 2 HOH 9 9 9 HOH HOH A . B 2 HOH 10 10 10 HOH HOH A . B 2 HOH 11 11 11 HOH HOH A . B 2 HOH 12 12 12 HOH HOH A . B 2 HOH 13 13 13 HOH HOH A . B 2 HOH 14 14 14 HOH HOH A . B 2 HOH 15 15 15 HOH HOH A . B 2 HOH 16 16 16 HOH HOH A . B 2 HOH 17 17 17 HOH HOH A . B 2 HOH 18 18 18 HOH HOH A . B 2 HOH 19 19 19 HOH HOH A . B 2 HOH 20 20 20 HOH HOH A . B 2 HOH 21 21 21 HOH HOH A . B 2 HOH 22 22 22 HOH HOH A . B 2 HOH 23 23 23 HOH HOH A . B 2 HOH 24 24 24 HOH HOH A . B 2 HOH 25 25 25 HOH HOH A . B 2 HOH 26 26 26 HOH HOH A . B 2 HOH 27 27 27 HOH HOH A . B 2 HOH 28 28 28 HOH HOH A . B 2 HOH 29 29 29 HOH HOH A . B 2 HOH 30 30 30 HOH HOH A . B 2 HOH 31 31 31 HOH HOH A . B 2 HOH 32 32 32 HOH HOH A . B 2 HOH 33 33 33 HOH HOH A . B 2 HOH 34 34 34 HOH HOH A . B 2 HOH 35 35 35 HOH HOH A . B 2 HOH 36 36 36 HOH HOH A . B 2 HOH 37 37 37 HOH HOH A . B 2 HOH 38 38 38 HOH HOH A . B 2 HOH 39 39 39 HOH HOH A . B 2 HOH 40 40 40 HOH HOH A . B 2 HOH 41 41 41 HOH HOH A . B 2 HOH 42 42 42 HOH HOH A . B 2 HOH 43 43 43 HOH HOH A . B 2 HOH 44 44 44 HOH HOH A . B 2 HOH 45 45 45 HOH HOH A . B 2 HOH 46 46 46 HOH HOH A . B 2 HOH 47 47 47 HOH HOH A . B 2 HOH 48 48 48 HOH HOH A . B 2 HOH 49 49 49 HOH HOH A . B 2 HOH 50 50 50 HOH HOH A . B 2 HOH 51 51 51 HOH HOH A . B 2 HOH 52 52 52 HOH HOH A . B 2 HOH 53 53 53 HOH HOH A . B 2 HOH 54 54 54 HOH HOH A . B 2 HOH 55 55 55 HOH HOH A . B 2 HOH 56 56 56 HOH HOH A . B 2 HOH 57 57 57 HOH HOH A . B 2 HOH 58 58 58 HOH HOH A . B 2 HOH 59 59 59 HOH HOH A . B 2 HOH 60 60 60 HOH HOH A . B 2 HOH 61 61 61 HOH HOH A . B 2 HOH 62 62 62 HOH HOH A . B 2 HOH 63 63 63 HOH HOH A . B 2 HOH 64 64 64 HOH HOH A . B 2 HOH 65 65 65 HOH HOH A . B 2 HOH 66 66 66 HOH HOH A . B 2 HOH 67 67 67 HOH HOH A . B 2 HOH 68 68 68 HOH HOH A . B 2 HOH 69 69 69 HOH HOH A . B 2 HOH 70 70 70 HOH HOH A . B 2 HOH 71 71 71 HOH HOH A . B 2 HOH 72 72 72 HOH HOH A . B 2 HOH 73 73 73 HOH HOH A . # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 2 SOLVE . ? program 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 3 RESOLVE . ? program 'Thomas C. Terwilliger' terwilliger@lanl.gov phasing http://www.solve.lanl.gov/ ? ? 4 REFMAC 5.2.0019 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 5 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 XDS . ? ? ? ? 'data scaling' ? ? ? 7 XDS . ? ? ? ? 'data reduction' ? ? ? # _cell.entry_id 3LH5 _cell.length_a 125.800 _cell.length_b 125.800 _cell.length_c 35.600 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3LH5 _symmetry.space_group_name_H-M 'P 64' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 172 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3LH5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.80 _exptl_crystal.density_percent_sol 56.06 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1 M Hepes pH 7.5, 7% isopropanol, 15-20% PEG3350, 1-5 mM DTT, VAPOR DIFFUSION, HANGING DROP, temperature 295K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2008-07-25 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol MIRAS _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9794 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9794 # _reflns.entry_id 3LH5 _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30 _reflns.d_resolution_high 2.6 _reflns.number_obs 10199 _reflns.number_all ? _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.085 _reflns.pdbx_netI_over_sigmaI 15.5 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 8.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.60 _reflns_shell.d_res_low 2.65 _reflns_shell.percent_possible_all 58.8 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.085 _reflns_shell.meanI_over_sigI_obs 1.9 _reflns_shell.pdbx_redundancy 4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3LH5 _refine.ls_number_reflns_obs 9187 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 27.24 _refine.ls_d_res_high 2.60 _refine.ls_percent_reflns_obs 99.64 _refine.ls_R_factor_obs 0.21288 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.20528 _refine.ls_R_factor_R_free 0.28545 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.9 _refine.ls_number_reflns_R_free 1010 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 1.00 _refine.occupancy_max 1.00 _refine.correlation_coeff_Fo_to_Fc 0.946 _refine.correlation_coeff_Fo_to_Fc_free 0.907 _refine.B_iso_mean 58.391 _refine.aniso_B[1][1] -0.30 _refine.aniso_B[2][2] -0.30 _refine.aniso_B[3][3] 0.45 _refine.aniso_B[1][2] -0.15 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MIRAS _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.901 _refine.pdbx_overall_ESU_R_Free 0.368 _refine.overall_SU_ML 0.252 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 23.036 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_TLS_residual_ADP_flag UNVERIFIED _refine.pdbx_diffrn_id 1 # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2026 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 73 _refine_hist.number_atoms_total 2099 _refine_hist.d_res_high 2.60 _refine_hist.d_res_low 27.24 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.011 0.022 ? 2070 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.279 1.946 ? 2795 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.320 5.000 ? 246 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 40.140 23.551 ? 107 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 19.943 15.000 ? 372 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 22.112 15.000 ? 19 'X-RAY DIFFRACTION' ? r_chiral_restr 0.081 0.200 ? 298 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 1584 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.209 0.200 ? 892 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.307 0.200 ? 1375 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.160 0.200 ? 95 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.173 0.200 ? 40 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.119 0.200 ? 10 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.543 1.500 ? 1273 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.879 2.000 ? 1995 'X-RAY DIFFRACTION' ? r_scbond_it 1.371 3.000 ? 909 'X-RAY DIFFRACTION' ? r_scangle_it 2.242 4.500 ? 800 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.600 _refine_ls_shell.d_res_low 2.668 _refine_ls_shell.number_reflns_R_work 694 _refine_ls_shell.R_factor_R_work 0.271 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.392 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 71 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3LH5 _struct.title 'Crystal Structure of the SH3-Guanylate kinase core domain of ZO-1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3LH5 _struct_keywords.text ;ZO-1, SH3-Guanylate kinase, Intramolecular fold, Cell junction, Cell membrane, Membrane, Phosphoprotein, SH3 domain, Tight junction, protein binding ; _struct_keywords.pdbx_keywords 'PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP ZO1_HUMAN Q07157 1 GDSFYIRTHFEYEKESPYGLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNKNRAEQLASVQY 516 ? 2 UNP ZO1_HUMAN Q07157 1 ;VQTKFPAYERVVLREAGFLRPVTIFGPIADVAREKLAREEPDIYQIAKSEPRDAGTDQRSSGIIRLHTIKQIIDQDKHAL LDVTPNAVDRLNYAQWYPIVVFLNPDSKQGVKTMRMRLCPESRKSARKLYERSHKLRKNNHHLFTTTINLNSMNDGWYGA LKEAIQQQQNQLVWVSEG ; 626 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3LH5 A 1 ? 73 ? Q07157 516 ? 588 ? 516 588 2 2 3LH5 A 74 ? 251 ? Q07157 626 ? 803 ? 626 803 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 49 ? HIS A 51 ? LYS A 564 HIS A 566 5 ? 3 HELX_P HELX_P2 2 ASN A 61 ? ALA A 69 ? ASN A 576 ALA A 584 1 ? 9 HELX_P HELX_P3 3 ILE A 101 ? GLU A 113 ? ILE A 653 GLU A 665 1 ? 13 HELX_P HELX_P4 4 ARG A 138 ? ASP A 147 ? ARG A 690 ASP A 699 1 ? 10 HELX_P HELX_P5 5 THR A 157 ? ALA A 167 ? THR A 709 ALA A 719 1 ? 11 HELX_P HELX_P6 6 SER A 180 ? CYS A 192 ? SER A 732 CYS A 744 1 ? 13 HELX_P HELX_P7 7 SER A 198 ? HIS A 214 ? SER A 750 HIS A 766 1 ? 17 HELX_P HELX_P8 8 HIS A 215 ? PHE A 217 ? HIS A 767 PHE A 769 5 ? 3 HELX_P HELX_P9 9 ASP A 228 ? ASN A 243 ? ASP A 780 ASN A 795 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 53 ? PRO A 60 ? GLU A 568 PRO A 575 A 2 SER A 41 ? ILE A 47 ? SER A 556 ILE A 562 A 3 VAL A 27 ? ASP A 32 ? VAL A 542 ASP A 547 A 4 PHE A 4 ? THR A 8 ? PHE A 519 THR A 523 A 5 TYR A 81 ? ARG A 87 ? TYR A 633 ARG A 639 A 6 VAL A 246 ? SER A 249 ? VAL A 798 SER A 801 B 1 TYR A 117 ? ILE A 119 ? TYR A 669 ILE A 671 B 2 HIS A 151 ? LEU A 154 ? HIS A 703 LEU A 706 B 3 VAL A 95 ? PHE A 98 ? VAL A 647 PHE A 650 B 4 ILE A 172 ? ASN A 177 ? ILE A 724 ASN A 729 B 5 THR A 219 ? ASN A 222 ? THR A 771 ASN A 774 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLY A 57 ? O GLY A 572 N ALA A 44 ? N ALA A 559 A 2 3 O LEU A 43 ? O LEU A 558 N ASP A 32 ? N ASP A 547 A 3 4 O VAL A 30 ? O VAL A 545 N PHE A 4 ? N PHE A 519 A 4 5 N ARG A 7 ? N ARG A 522 O GLU A 82 ? O GLU A 634 A 5 6 N VAL A 85 ? N VAL A 637 O VAL A 248 ? O VAL A 800 B 1 2 N GLN A 118 ? N GLN A 670 O LEU A 153 ? O LEU A 705 B 2 3 O ALA A 152 ? O ALA A 704 N VAL A 95 ? N VAL A 647 B 3 4 N THR A 96 ? N THR A 648 O ILE A 172 ? O ILE A 724 B 4 5 N ASN A 177 ? N ASN A 729 O ILE A 221 ? O ILE A 773 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 740 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 740 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 740 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 116.82 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation -3.48 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 549 ? ? 45.70 79.48 2 1 TYR A 588 ? ? -67.36 9.91 3 1 VAL A 626 ? ? -42.50 98.45 4 1 GLN A 627 ? ? -69.74 94.56 5 1 TYR A 722 ? ? 26.24 75.32 6 1 CYS A 744 ? ? -153.30 66.89 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 17.0530 48.7770 15.5900 0.0081 0.0446 -0.0186 -0.2946 -0.1350 0.1523 10.0987 4.3760 4.1607 2.7294 -1.5055 0.1602 -0.3676 0.5429 0.3308 -0.3538 0.3996 0.2470 -0.0318 -0.4065 -0.0320 'X-RAY DIFFRACTION' 2 ? refined -5.5080 33.2980 16.3920 -0.2507 -0.1298 -0.1186 -0.0156 -0.0403 0.0903 2.9481 2.7049 4.0514 0.6606 0.4609 -0.1567 0.0063 0.0174 0.1992 -0.0927 -0.0796 0.0316 -0.1650 0.0629 0.0733 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 1 ? ? A 89 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 90 ? ? A 251 ? ? ? ? # _phasing.method MIRAS # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ARG 684 ? A ARG 132 2 1 Y 1 A SER 685 ? A SER 133 3 1 Y 1 A SER 686 ? A SER 134 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _atom_sites.entry_id 3LH5 _atom_sites.fract_transf_matrix[1][1] 0.007949 _atom_sites.fract_transf_matrix[1][2] 0.004589 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009179 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.028090 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_