data_3LHI # _entry.id 3LHI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3LHI pdb_00003lhi 10.2210/pdb3lhi/pdb RCSB RCSB057284 ? ? WWPDB D_1000057284 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 398990 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3LHI _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-01-22 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of Putative 6-phosphogluconolactonase(YP_207848.1) from Neisseria gonorrhoeae FA 1090 at 1.33 A resolution' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3LHI _cell.length_a 63.237 _cell.length_b 63.237 _cell.length_c 106.920 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 6 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3LHI _symmetry.Int_Tables_number 154 _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative 6-phosphogluconolactonase' 25149.539 1 ? ? ? ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 3 water nat water 18.015 385 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)FVWHEYENAAEAAQSLADAVADALQGALDEKGGAVLAVSGGRSPIAFFNALSQKDLDWKNVGITLADERIVPTN HADSNTGLVREYLLKNKAAAAVWIP(MSE)VEDGKTETELHPDAVVDYALKHYKQPDVLILG(MSE)GNDGHTASIFPKA PQFQTAIDGSAGVALVHTTPVTAPHERIS(MSE)TLDAIAHTGHVFLAIQGEEKKAVFDQAAQGENREYPISLVLNHQGV NCHVFYAE ; _entity_poly.pdbx_seq_one_letter_code_can ;GMFVWHEYENAAEAAQSLADAVADALQGALDEKGGAVLAVSGGRSPIAFFNALSQKDLDWKNVGITLADERIVPTNHADS NTGLVREYLLKNKAAAAVWIPMVEDGKTETELHPDAVVDYALKHYKQPDVLILGMGNDGHTASIFPKAPQFQTAIDGSAG VALVHTTPVTAPHERISMTLDAIAHTGHVFLAIQGEEKKAVFDQAAQGENREYPISLVLNHQGVNCHVFYAE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 398990 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 PHE n 1 4 VAL n 1 5 TRP n 1 6 HIS n 1 7 GLU n 1 8 TYR n 1 9 GLU n 1 10 ASN n 1 11 ALA n 1 12 ALA n 1 13 GLU n 1 14 ALA n 1 15 ALA n 1 16 GLN n 1 17 SER n 1 18 LEU n 1 19 ALA n 1 20 ASP n 1 21 ALA n 1 22 VAL n 1 23 ALA n 1 24 ASP n 1 25 ALA n 1 26 LEU n 1 27 GLN n 1 28 GLY n 1 29 ALA n 1 30 LEU n 1 31 ASP n 1 32 GLU n 1 33 LYS n 1 34 GLY n 1 35 GLY n 1 36 ALA n 1 37 VAL n 1 38 LEU n 1 39 ALA n 1 40 VAL n 1 41 SER n 1 42 GLY n 1 43 GLY n 1 44 ARG n 1 45 SER n 1 46 PRO n 1 47 ILE n 1 48 ALA n 1 49 PHE n 1 50 PHE n 1 51 ASN n 1 52 ALA n 1 53 LEU n 1 54 SER n 1 55 GLN n 1 56 LYS n 1 57 ASP n 1 58 LEU n 1 59 ASP n 1 60 TRP n 1 61 LYS n 1 62 ASN n 1 63 VAL n 1 64 GLY n 1 65 ILE n 1 66 THR n 1 67 LEU n 1 68 ALA n 1 69 ASP n 1 70 GLU n 1 71 ARG n 1 72 ILE n 1 73 VAL n 1 74 PRO n 1 75 THR n 1 76 ASN n 1 77 HIS n 1 78 ALA n 1 79 ASP n 1 80 SER n 1 81 ASN n 1 82 THR n 1 83 GLY n 1 84 LEU n 1 85 VAL n 1 86 ARG n 1 87 GLU n 1 88 TYR n 1 89 LEU n 1 90 LEU n 1 91 LYS n 1 92 ASN n 1 93 LYS n 1 94 ALA n 1 95 ALA n 1 96 ALA n 1 97 ALA n 1 98 VAL n 1 99 TRP n 1 100 ILE n 1 101 PRO n 1 102 MSE n 1 103 VAL n 1 104 GLU n 1 105 ASP n 1 106 GLY n 1 107 LYS n 1 108 THR n 1 109 GLU n 1 110 THR n 1 111 GLU n 1 112 LEU n 1 113 HIS n 1 114 PRO n 1 115 ASP n 1 116 ALA n 1 117 VAL n 1 118 VAL n 1 119 ASP n 1 120 TYR n 1 121 ALA n 1 122 LEU n 1 123 LYS n 1 124 HIS n 1 125 TYR n 1 126 LYS n 1 127 GLN n 1 128 PRO n 1 129 ASP n 1 130 VAL n 1 131 LEU n 1 132 ILE n 1 133 LEU n 1 134 GLY n 1 135 MSE n 1 136 GLY n 1 137 ASN n 1 138 ASP n 1 139 GLY n 1 140 HIS n 1 141 THR n 1 142 ALA n 1 143 SER n 1 144 ILE n 1 145 PHE n 1 146 PRO n 1 147 LYS n 1 148 ALA n 1 149 PRO n 1 150 GLN n 1 151 PHE n 1 152 GLN n 1 153 THR n 1 154 ALA n 1 155 ILE n 1 156 ASP n 1 157 GLY n 1 158 SER n 1 159 ALA n 1 160 GLY n 1 161 VAL n 1 162 ALA n 1 163 LEU n 1 164 VAL n 1 165 HIS n 1 166 THR n 1 167 THR n 1 168 PRO n 1 169 VAL n 1 170 THR n 1 171 ALA n 1 172 PRO n 1 173 HIS n 1 174 GLU n 1 175 ARG n 1 176 ILE n 1 177 SER n 1 178 MSE n 1 179 THR n 1 180 LEU n 1 181 ASP n 1 182 ALA n 1 183 ILE n 1 184 ALA n 1 185 HIS n 1 186 THR n 1 187 GLY n 1 188 HIS n 1 189 VAL n 1 190 PHE n 1 191 LEU n 1 192 ALA n 1 193 ILE n 1 194 GLN n 1 195 GLY n 1 196 GLU n 1 197 GLU n 1 198 LYS n 1 199 LYS n 1 200 ALA n 1 201 VAL n 1 202 PHE n 1 203 ASP n 1 204 GLN n 1 205 ALA n 1 206 ALA n 1 207 GLN n 1 208 GLY n 1 209 GLU n 1 210 ASN n 1 211 ARG n 1 212 GLU n 1 213 TYR n 1 214 PRO n 1 215 ILE n 1 216 SER n 1 217 LEU n 1 218 VAL n 1 219 LEU n 1 220 ASN n 1 221 HIS n 1 222 GLN n 1 223 GLY n 1 224 VAL n 1 225 ASN n 1 226 CYS n 1 227 HIS n 1 228 VAL n 1 229 PHE n 1 230 TYR n 1 231 ALA n 1 232 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene NGO0716 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 700825 / FA 1090' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Neisseria gonorrhoeae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 242231 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q5F8Q1_NEIG1 _struct_ref.pdbx_db_accession Q5F8Q1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MFVWHEYENAAEAAQSLADAVADALQGALDEKGGAVLAVSGGRSPIAFFNALSQKDLDWKNVGITLADERIVPTNHADSN TGLVREYLLKNKAAAAVWIPMVEDGKTETELHPDAVVDYALKHYKQPDVLILGMGNDGHTASIFPKAPQFQTAIDGSAGV ALVHTTPVTAPHERISMTLDAIAHTGHVFLAIQGEEKKAVFDQAAQGENREYPISLVLNHQGVNCHVFYAE ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3LHI _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 232 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q5F8Q1 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 231 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 231 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3LHI _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q5F8Q1 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3LHI # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.45 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 49.87 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 6.2 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '0.2000M NH4F, 20.0000% PEG-3350, No Buffer pH 6.2, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat collimating mirror, toroid focusing mirror' _diffrn_detector.pdbx_collection_date 2009-11-06 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97951 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL9-2 _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_wavelength_list 0.91837,0.97951 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3LHI _reflns.d_resolution_high 1.33 _reflns.d_resolution_low 27.382 _reflns.number_obs 52593 _reflns.pdbx_Rmerge_I_obs 0.036 _reflns.pdbx_netI_over_sigmaI 17.470 _reflns.percent_possible_obs 90.900 _reflns.B_iso_Wilson_estimate 15.686 _reflns.observed_criterion_sigma_I -3.00 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 1.33 1.38 12617 ? 6413 0.594 1.4 ? ? ? ? ? 55.40 ? 1 1.38 1.43 16576 ? 7016 0.476 2.0 ? ? ? ? ? 70.60 ? 2 1.43 1.50 27755 ? 10232 0.337 3.0 ? ? ? ? ? 86.60 ? 3 1.50 1.58 39276 ? 10979 0.251 5.1 ? ? ? ? ? 99.20 ? 4 1.58 1.68 41489 ? 10951 0.161 8.0 ? ? ? ? ? 99.60 ? 5 1.68 1.80 38871 ? 10229 0.106 11.8 ? ? ? ? ? 99.70 ? 6 1.80 1.99 43317 ? 11449 0.065 18.3 ? ? ? ? ? 99.70 ? 7 1.99 2.27 40103 ? 10656 0.041 27.9 ? ? ? ? ? 99.50 ? 8 2.27 2.86 42187 ? 11048 0.030 36.1 ? ? ? ? ? 99.80 ? 9 2.86 27.382 41681 ? 10997 0.023 47.6 ? ? ? ? ? 99.30 ? 10 # _refine.entry_id 3LHI _refine.ls_d_res_high 1.330 _refine.ls_d_res_low 27.382 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 91.760 _refine.ls_number_reflns_obs 52563 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3. ETHYLENE GLYCOL (EDO) MOLECULES ARE MODELED BASED ON CRYO CONDITION. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.133 _refine.ls_R_factor_R_work 0.132 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.161 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 2685 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 21.128 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.010 _refine.aniso_B[2][2] -0.010 _refine.aniso_B[3][3] 0.010 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.979 _refine.correlation_coeff_Fo_to_Fc_free 0.972 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.051 _refine.pdbx_overall_ESU_R_Free 0.048 _refine.overall_SU_ML 0.028 _refine.overall_SU_B 1.538 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 90.45 _refine.B_iso_min 7.87 _refine.occupancy_max 1.00 _refine.occupancy_min 0.30 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1884 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 8 _refine_hist.number_atoms_solvent 394 _refine_hist.number_atoms_total 2286 _refine_hist.d_res_high 1.330 _refine_hist.d_res_low 27.382 # loop_ _refine_ls_restr.type _refine_ls_restr.pdbx_refine_id _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 'X-RAY DIFFRACTION' 1947 0.017 0.021 ? ? r_bond_other_d 'X-RAY DIFFRACTION' 1245 0.004 0.020 ? ? r_angle_refined_deg 'X-RAY DIFFRACTION' 2672 1.702 1.938 ? ? r_angle_other_deg 'X-RAY DIFFRACTION' 3075 0.978 3.000 ? ? r_dihedral_angle_1_deg 'X-RAY DIFFRACTION' 262 6.138 5.000 ? ? r_dihedral_angle_2_deg 'X-RAY DIFFRACTION' 87 32.551 25.287 ? ? r_dihedral_angle_3_deg 'X-RAY DIFFRACTION' 306 11.385 15.000 ? ? r_dihedral_angle_4_deg 'X-RAY DIFFRACTION' 6 13.124 15.000 ? ? r_chiral_restr 'X-RAY DIFFRACTION' 297 0.115 0.200 ? ? r_gen_planes_refined 'X-RAY DIFFRACTION' 2294 0.009 0.021 ? ? r_gen_planes_other 'X-RAY DIFFRACTION' 381 0.003 0.020 ? ? r_mcbond_it 'X-RAY DIFFRACTION' 1244 2.758 3.000 ? ? r_mcbond_other 'X-RAY DIFFRACTION' 500 0.993 3.000 ? ? r_mcangle_it 'X-RAY DIFFRACTION' 2013 3.792 4.000 ? ? r_scbond_it 'X-RAY DIFFRACTION' 703 5.115 5.000 ? ? r_scangle_it 'X-RAY DIFFRACTION' 659 7.126 6.000 ? ? r_rigid_bond_restr 'X-RAY DIFFRACTION' 3192 1.966 3.000 ? ? # _refine_ls_shell.d_res_high 1.332 _refine_ls_shell.d_res_low 1.367 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 57.290 _refine_ls_shell.number_reflns_R_work 2272 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.273 _refine_ls_shell.R_factor_R_free 0.331 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 136 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2408 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3LHI _struct.title 'Crystal structure of Putative 6-phosphogluconolactonase(YP_207848.1) from Neisseria gonorrhoeae FA 1090 at 1.33 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text 'Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.entry_id 3LHI # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ;STATIC LIGHT SCATTERING SUPPORTS THE ASSIGNMENT OF A DIMER AS A SIGNIFICANT OLIGOMERIZATION STATE. ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 10 ? GLY A 34 ? ASN A 9 GLY A 33 1 ? 25 HELX_P HELX_P2 2 PRO A 46 ? GLN A 55 ? PRO A 45 GLN A 54 1 ? 10 HELX_P HELX_P3 3 ASP A 59 ? LYS A 61 ? ASP A 58 LYS A 60 5 ? 3 HELX_P HELX_P4 4 SER A 80 ? LEU A 89 ? SER A 79 LEU A 88 1 ? 10 HELX_P HELX_P5 5 LYS A 91 ? ALA A 97 ? LYS A 90 ALA A 96 5 ? 7 HELX_P HELX_P6 6 THR A 108 ? LEU A 112 ? THR A 107 LEU A 111 5 ? 5 HELX_P HELX_P7 7 HIS A 113 ? TYR A 125 ? HIS A 112 TYR A 124 1 ? 13 HELX_P HELX_P8 8 GLN A 150 ? ASP A 156 ? GLN A 149 ASP A 155 1 ? 7 HELX_P HELX_P9 9 THR A 179 ? HIS A 185 ? THR A 178 HIS A 184 1 ? 7 HELX_P HELX_P10 10 GLY A 195 ? GLN A 207 ? GLY A 194 GLN A 206 1 ? 13 HELX_P HELX_P11 11 PRO A 214 ? ASN A 220 ? PRO A 213 ASN A 219 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 2 C ? ? ? 1_555 A PHE 3 N ? ? A MSE 1 A PHE 2 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale2 covale both ? A PRO 101 C ? ? ? 1_555 A MSE 102 N A ? A PRO 100 A MSE 101 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale3 covale both ? A PRO 101 C ? ? ? 1_555 A MSE 102 N B ? A PRO 100 A MSE 101 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale4 covale both ? A MSE 102 C A ? ? 1_555 A VAL 103 N ? ? A MSE 101 A VAL 102 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale5 covale both ? A MSE 102 C B ? ? 1_555 A VAL 103 N ? ? A MSE 101 A VAL 102 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale6 covale both ? A GLY 134 C ? ? ? 1_555 A MSE 135 N ? ? A GLY 133 A MSE 134 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale7 covale both ? A MSE 135 C ? ? ? 1_555 A GLY 136 N ? ? A MSE 134 A GLY 135 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale8 covale both ? A SER 177 C ? ? ? 1_555 A MSE 178 N ? ? A SER 176 A MSE 177 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale9 covale both ? A MSE 178 C ? ? ? 1_555 A THR 179 N ? ? A MSE 177 A THR 178 1_555 ? ? ? ? ? ? ? 1.306 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 3 ? TYR A 8 ? PHE A 2 TYR A 7 A 2 CYS A 226 ? ALA A 231 ? CYS A 225 ALA A 230 A 3 HIS A 188 ? GLN A 194 ? HIS A 187 GLN A 193 A 4 VAL A 130 ? LEU A 133 ? VAL A 129 LEU A 132 A 5 ALA A 36 ? VAL A 40 ? ALA A 35 VAL A 39 A 6 VAL A 63 ? LEU A 67 ? VAL A 62 LEU A 66 A 7 VAL A 98 ? TRP A 99 ? VAL A 97 TRP A 98 B 1 ASP A 69 ? ARG A 71 ? ASP A 68 ARG A 70 B 2 ARG A 175 ? MSE A 178 ? ARG A 174 MSE A 177 B 3 LEU A 163 ? THR A 166 ? LEU A 162 THR A 165 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N HIS A 6 ? N HIS A 5 O TYR A 230 ? O TYR A 229 A 2 3 O PHE A 229 ? O PHE A 228 N LEU A 191 ? N LEU A 190 A 3 4 O PHE A 190 ? O PHE A 189 N LEU A 133 ? N LEU A 132 A 4 5 O VAL A 130 ? O VAL A 129 N ALA A 39 ? N ALA A 38 A 5 6 N LEU A 38 ? N LEU A 37 O GLY A 64 ? O GLY A 63 A 6 7 N VAL A 63 ? N VAL A 62 O VAL A 98 ? O VAL A 97 B 1 2 N GLU A 70 ? N GLU A 69 O ILE A 176 ? O ILE A 175 B 2 3 O ARG A 175 ? O ARG A 174 N THR A 166 ? N THR A 165 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A EDO 232 ? 6 'BINDING SITE FOR RESIDUE EDO A 232' AC2 Software A EDO 233 ? 6 'BINDING SITE FOR RESIDUE EDO A 233' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ASP A 31 ? ASP A 30 . ? 4_655 ? 2 AC1 6 LYS A 33 ? LYS A 32 . ? 4_655 ? 3 AC1 6 GLY A 34 ? GLY A 33 . ? 4_655 ? 4 AC1 6 VAL A 169 ? VAL A 168 . ? 1_555 ? 5 AC1 6 THR A 170 ? THR A 169 . ? 1_555 ? 6 AC1 6 HOH D . ? HOH A 365 . ? 1_555 ? 7 AC2 6 ALA A 78 ? ALA A 77 . ? 1_555 ? 8 AC2 6 GLY A 83 ? GLY A 82 . ? 1_555 ? 9 AC2 6 LEU A 84 ? LEU A 83 . ? 1_555 ? 10 AC2 6 GLU A 87 ? GLU A 86 . ? 1_555 ? 11 AC2 6 HOH D . ? HOH A 310 . ? 1_555 ? 12 AC2 6 HOH D . ? HOH A 357 . ? 4_655 ? # _atom_sites.entry_id 3LHI _atom_sites.fract_transf_matrix[1][1] 0.015814 _atom_sites.fract_transf_matrix[1][2] 0.009130 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018260 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009353 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 PHE 3 2 2 PHE PHE A . n A 1 4 VAL 4 3 3 VAL VAL A . n A 1 5 TRP 5 4 4 TRP TRP A . n A 1 6 HIS 6 5 5 HIS HIS A . n A 1 7 GLU 7 6 6 GLU GLU A . n A 1 8 TYR 8 7 7 TYR TYR A . n A 1 9 GLU 9 8 8 GLU GLU A . n A 1 10 ASN 10 9 9 ASN ASN A . n A 1 11 ALA 11 10 10 ALA ALA A . n A 1 12 ALA 12 11 11 ALA ALA A . n A 1 13 GLU 13 12 12 GLU GLU A . n A 1 14 ALA 14 13 13 ALA ALA A . n A 1 15 ALA 15 14 14 ALA ALA A . n A 1 16 GLN 16 15 15 GLN GLN A . n A 1 17 SER 17 16 16 SER SER A . n A 1 18 LEU 18 17 17 LEU LEU A . n A 1 19 ALA 19 18 18 ALA ALA A . n A 1 20 ASP 20 19 19 ASP ASP A . n A 1 21 ALA 21 20 20 ALA ALA A . n A 1 22 VAL 22 21 21 VAL VAL A . n A 1 23 ALA 23 22 22 ALA ALA A . n A 1 24 ASP 24 23 23 ASP ASP A . n A 1 25 ALA 25 24 24 ALA ALA A . n A 1 26 LEU 26 25 25 LEU LEU A . n A 1 27 GLN 27 26 26 GLN GLN A . n A 1 28 GLY 28 27 27 GLY GLY A . n A 1 29 ALA 29 28 28 ALA ALA A . n A 1 30 LEU 30 29 29 LEU LEU A . n A 1 31 ASP 31 30 30 ASP ASP A . n A 1 32 GLU 32 31 31 GLU GLU A . n A 1 33 LYS 33 32 32 LYS LYS A . n A 1 34 GLY 34 33 33 GLY GLY A . n A 1 35 GLY 35 34 34 GLY GLY A . n A 1 36 ALA 36 35 35 ALA ALA A . n A 1 37 VAL 37 36 36 VAL VAL A . n A 1 38 LEU 38 37 37 LEU LEU A . n A 1 39 ALA 39 38 38 ALA ALA A . n A 1 40 VAL 40 39 39 VAL VAL A . n A 1 41 SER 41 40 40 SER SER A . n A 1 42 GLY 42 41 41 GLY GLY A . n A 1 43 GLY 43 42 42 GLY GLY A . n A 1 44 ARG 44 43 43 ARG ARG A . n A 1 45 SER 45 44 44 SER SER A . n A 1 46 PRO 46 45 45 PRO PRO A . n A 1 47 ILE 47 46 46 ILE ILE A . n A 1 48 ALA 48 47 47 ALA ALA A . n A 1 49 PHE 49 48 48 PHE PHE A . n A 1 50 PHE 50 49 49 PHE PHE A . n A 1 51 ASN 51 50 50 ASN ASN A . n A 1 52 ALA 52 51 51 ALA ALA A . n A 1 53 LEU 53 52 52 LEU LEU A . n A 1 54 SER 54 53 53 SER SER A . n A 1 55 GLN 55 54 54 GLN GLN A . n A 1 56 LYS 56 55 55 LYS LYS A . n A 1 57 ASP 57 56 56 ASP ASP A . n A 1 58 LEU 58 57 57 LEU LEU A . n A 1 59 ASP 59 58 58 ASP ASP A . n A 1 60 TRP 60 59 59 TRP TRP A . n A 1 61 LYS 61 60 60 LYS LYS A . n A 1 62 ASN 62 61 61 ASN ASN A . n A 1 63 VAL 63 62 62 VAL VAL A . n A 1 64 GLY 64 63 63 GLY GLY A . n A 1 65 ILE 65 64 64 ILE ILE A . n A 1 66 THR 66 65 65 THR THR A . n A 1 67 LEU 67 66 66 LEU LEU A . n A 1 68 ALA 68 67 67 ALA ALA A . n A 1 69 ASP 69 68 68 ASP ASP A . n A 1 70 GLU 70 69 69 GLU GLU A . n A 1 71 ARG 71 70 70 ARG ARG A . n A 1 72 ILE 72 71 71 ILE ILE A . n A 1 73 VAL 73 72 72 VAL VAL A . n A 1 74 PRO 74 73 73 PRO PRO A . n A 1 75 THR 75 74 74 THR THR A . n A 1 76 ASN 76 75 75 ASN ASN A . n A 1 77 HIS 77 76 76 HIS HIS A . n A 1 78 ALA 78 77 77 ALA ALA A . n A 1 79 ASP 79 78 78 ASP ASP A . n A 1 80 SER 80 79 79 SER SER A . n A 1 81 ASN 81 80 80 ASN ASN A . n A 1 82 THR 82 81 81 THR THR A . n A 1 83 GLY 83 82 82 GLY GLY A . n A 1 84 LEU 84 83 83 LEU LEU A . n A 1 85 VAL 85 84 84 VAL VAL A . n A 1 86 ARG 86 85 85 ARG ARG A . n A 1 87 GLU 87 86 86 GLU GLU A . n A 1 88 TYR 88 87 87 TYR TYR A . n A 1 89 LEU 89 88 88 LEU LEU A . n A 1 90 LEU 90 89 89 LEU LEU A . n A 1 91 LYS 91 90 90 LYS LYS A . n A 1 92 ASN 92 91 91 ASN ASN A . n A 1 93 LYS 93 92 92 LYS LYS A . n A 1 94 ALA 94 93 93 ALA ALA A . n A 1 95 ALA 95 94 94 ALA ALA A . n A 1 96 ALA 96 95 95 ALA ALA A . n A 1 97 ALA 97 96 96 ALA ALA A . n A 1 98 VAL 98 97 97 VAL VAL A . n A 1 99 TRP 99 98 98 TRP TRP A . n A 1 100 ILE 100 99 99 ILE ILE A . n A 1 101 PRO 101 100 100 PRO PRO A . n A 1 102 MSE 102 101 101 MSE MSE A . n A 1 103 VAL 103 102 102 VAL VAL A . n A 1 104 GLU 104 103 103 GLU GLU A . n A 1 105 ASP 105 104 104 ASP ASP A . n A 1 106 GLY 106 105 105 GLY GLY A . n A 1 107 LYS 107 106 106 LYS LYS A . n A 1 108 THR 108 107 107 THR THR A . n A 1 109 GLU 109 108 108 GLU GLU A . n A 1 110 THR 110 109 109 THR THR A . n A 1 111 GLU 111 110 110 GLU GLU A . n A 1 112 LEU 112 111 111 LEU LEU A . n A 1 113 HIS 113 112 112 HIS HIS A . n A 1 114 PRO 114 113 113 PRO PRO A . n A 1 115 ASP 115 114 114 ASP ASP A . n A 1 116 ALA 116 115 115 ALA ALA A . n A 1 117 VAL 117 116 116 VAL VAL A . n A 1 118 VAL 118 117 117 VAL VAL A . n A 1 119 ASP 119 118 118 ASP ASP A . n A 1 120 TYR 120 119 119 TYR TYR A . n A 1 121 ALA 121 120 120 ALA ALA A . n A 1 122 LEU 122 121 121 LEU LEU A . n A 1 123 LYS 123 122 122 LYS LYS A . n A 1 124 HIS 124 123 123 HIS HIS A . n A 1 125 TYR 125 124 124 TYR TYR A . n A 1 126 LYS 126 125 125 LYS LYS A . n A 1 127 GLN 127 126 126 GLN GLN A . n A 1 128 PRO 128 127 127 PRO PRO A . n A 1 129 ASP 129 128 128 ASP ASP A . n A 1 130 VAL 130 129 129 VAL VAL A . n A 1 131 LEU 131 130 130 LEU LEU A . n A 1 132 ILE 132 131 131 ILE ILE A . n A 1 133 LEU 133 132 132 LEU LEU A . n A 1 134 GLY 134 133 133 GLY GLY A . n A 1 135 MSE 135 134 134 MSE MSE A . n A 1 136 GLY 136 135 135 GLY GLY A . n A 1 137 ASN 137 136 136 ASN ASN A . n A 1 138 ASP 138 137 137 ASP ASP A . n A 1 139 GLY 139 138 138 GLY GLY A . n A 1 140 HIS 140 139 139 HIS HIS A . n A 1 141 THR 141 140 140 THR THR A . n A 1 142 ALA 142 141 141 ALA ALA A . n A 1 143 SER 143 142 142 SER SER A . n A 1 144 ILE 144 143 143 ILE ILE A . n A 1 145 PHE 145 144 144 PHE PHE A . n A 1 146 PRO 146 145 145 PRO PRO A . n A 1 147 LYS 147 146 146 LYS LYS A . n A 1 148 ALA 148 147 147 ALA ALA A . n A 1 149 PRO 149 148 148 PRO PRO A . n A 1 150 GLN 150 149 149 GLN GLN A . n A 1 151 PHE 151 150 150 PHE PHE A . n A 1 152 GLN 152 151 151 GLN GLN A . n A 1 153 THR 153 152 152 THR THR A . n A 1 154 ALA 154 153 153 ALA ALA A . n A 1 155 ILE 155 154 154 ILE ILE A . n A 1 156 ASP 156 155 155 ASP ASP A . n A 1 157 GLY 157 156 156 GLY GLY A . n A 1 158 SER 158 157 157 SER SER A . n A 1 159 ALA 159 158 158 ALA ALA A . n A 1 160 GLY 160 159 159 GLY GLY A . n A 1 161 VAL 161 160 160 VAL VAL A . n A 1 162 ALA 162 161 161 ALA ALA A . n A 1 163 LEU 163 162 162 LEU LEU A . n A 1 164 VAL 164 163 163 VAL VAL A . n A 1 165 HIS 165 164 164 HIS HIS A . n A 1 166 THR 166 165 165 THR THR A . n A 1 167 THR 167 166 166 THR THR A . n A 1 168 PRO 168 167 167 PRO PRO A . n A 1 169 VAL 169 168 168 VAL VAL A . n A 1 170 THR 170 169 169 THR THR A . n A 1 171 ALA 171 170 170 ALA ALA A . n A 1 172 PRO 172 171 171 PRO PRO A . n A 1 173 HIS 173 172 172 HIS HIS A . n A 1 174 GLU 174 173 173 GLU GLU A . n A 1 175 ARG 175 174 174 ARG ARG A . n A 1 176 ILE 176 175 175 ILE ILE A . n A 1 177 SER 177 176 176 SER SER A . n A 1 178 MSE 178 177 177 MSE MSE A . n A 1 179 THR 179 178 178 THR THR A . n A 1 180 LEU 180 179 179 LEU LEU A . n A 1 181 ASP 181 180 180 ASP ASP A . n A 1 182 ALA 182 181 181 ALA ALA A . n A 1 183 ILE 183 182 182 ILE ILE A . n A 1 184 ALA 184 183 183 ALA ALA A . n A 1 185 HIS 185 184 184 HIS HIS A . n A 1 186 THR 186 185 185 THR THR A . n A 1 187 GLY 187 186 186 GLY GLY A . n A 1 188 HIS 188 187 187 HIS HIS A . n A 1 189 VAL 189 188 188 VAL VAL A . n A 1 190 PHE 190 189 189 PHE PHE A . n A 1 191 LEU 191 190 190 LEU LEU A . n A 1 192 ALA 192 191 191 ALA ALA A . n A 1 193 ILE 193 192 192 ILE ILE A . n A 1 194 GLN 194 193 193 GLN GLN A . n A 1 195 GLY 195 194 194 GLY GLY A . n A 1 196 GLU 196 195 195 GLU GLU A . n A 1 197 GLU 197 196 196 GLU GLU A . n A 1 198 LYS 198 197 197 LYS LYS A . n A 1 199 LYS 199 198 198 LYS LYS A . n A 1 200 ALA 200 199 199 ALA ALA A . n A 1 201 VAL 201 200 200 VAL VAL A . n A 1 202 PHE 202 201 201 PHE PHE A . n A 1 203 ASP 203 202 202 ASP ASP A . n A 1 204 GLN 204 203 203 GLN GLN A . n A 1 205 ALA 205 204 204 ALA ALA A . n A 1 206 ALA 206 205 205 ALA ALA A . n A 1 207 GLN 207 206 206 GLN GLN A . n A 1 208 GLY 208 207 207 GLY GLY A . n A 1 209 GLU 209 208 208 GLU GLU A . n A 1 210 ASN 210 209 209 ASN ASN A . n A 1 211 ARG 211 210 210 ARG ARG A . n A 1 212 GLU 212 211 211 GLU GLU A . n A 1 213 TYR 213 212 212 TYR TYR A . n A 1 214 PRO 214 213 213 PRO PRO A . n A 1 215 ILE 215 214 214 ILE ILE A . n A 1 216 SER 216 215 215 SER SER A . n A 1 217 LEU 217 216 216 LEU LEU A . n A 1 218 VAL 218 217 217 VAL VAL A . n A 1 219 LEU 219 218 218 LEU LEU A . n A 1 220 ASN 220 219 219 ASN ASN A . n A 1 221 HIS 221 220 220 HIS HIS A . n A 1 222 GLN 222 221 221 GLN GLN A . n A 1 223 GLY 223 222 222 GLY GLY A . n A 1 224 VAL 224 223 223 VAL VAL A . n A 1 225 ASN 225 224 224 ASN ASN A . n A 1 226 CYS 226 225 225 CYS CYS A . n A 1 227 HIS 227 226 226 HIS HIS A . n A 1 228 VAL 228 227 227 VAL VAL A . n A 1 229 PHE 229 228 228 PHE PHE A . n A 1 230 TYR 230 229 229 TYR TYR A . n A 1 231 ALA 231 230 230 ALA ALA A . n A 1 232 GLU 232 231 231 GLU GLU A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO 1 232 1 EDO EDO A . C 2 EDO 1 233 2 EDO EDO A . D 3 HOH 1 234 234 HOH HOH A . D 3 HOH 2 235 235 HOH HOH A . D 3 HOH 3 236 236 HOH HOH A . D 3 HOH 4 237 237 HOH HOH A . D 3 HOH 5 238 238 HOH HOH A . D 3 HOH 6 239 239 HOH HOH A . D 3 HOH 7 240 240 HOH HOH A . D 3 HOH 8 241 241 HOH HOH A . D 3 HOH 9 242 242 HOH HOH A . D 3 HOH 10 243 243 HOH HOH A . D 3 HOH 11 244 244 HOH HOH A . D 3 HOH 12 245 245 HOH HOH A . D 3 HOH 13 246 246 HOH HOH A . D 3 HOH 14 247 247 HOH HOH A . D 3 HOH 15 248 248 HOH HOH A . D 3 HOH 16 249 249 HOH HOH A . D 3 HOH 17 250 250 HOH HOH A . D 3 HOH 18 251 251 HOH HOH A . D 3 HOH 19 252 252 HOH HOH A . D 3 HOH 20 253 253 HOH HOH A . D 3 HOH 21 254 254 HOH HOH A . D 3 HOH 22 255 255 HOH HOH A . D 3 HOH 23 256 256 HOH HOH A . D 3 HOH 24 257 257 HOH HOH A . D 3 HOH 25 258 258 HOH HOH A . D 3 HOH 26 259 259 HOH HOH A . D 3 HOH 27 260 260 HOH HOH A . D 3 HOH 28 261 261 HOH HOH A . D 3 HOH 29 262 262 HOH HOH A . D 3 HOH 30 263 263 HOH HOH A . D 3 HOH 31 264 264 HOH HOH A . D 3 HOH 32 265 265 HOH HOH A . D 3 HOH 33 266 266 HOH HOH A . D 3 HOH 34 267 267 HOH HOH A . D 3 HOH 35 268 268 HOH HOH A . D 3 HOH 36 269 269 HOH HOH A . D 3 HOH 37 270 270 HOH HOH A . D 3 HOH 38 271 271 HOH HOH A . D 3 HOH 39 272 272 HOH HOH A . D 3 HOH 40 273 273 HOH HOH A . D 3 HOH 41 274 274 HOH HOH A . D 3 HOH 42 275 275 HOH HOH A . D 3 HOH 43 276 276 HOH HOH A . D 3 HOH 44 277 277 HOH HOH A . D 3 HOH 45 278 278 HOH HOH A . D 3 HOH 46 279 279 HOH HOH A . D 3 HOH 47 280 280 HOH HOH A . D 3 HOH 48 281 281 HOH HOH A . D 3 HOH 49 282 282 HOH HOH A . D 3 HOH 50 283 283 HOH HOH A . D 3 HOH 51 284 284 HOH HOH A . D 3 HOH 52 285 285 HOH HOH A . D 3 HOH 53 286 286 HOH HOH A . D 3 HOH 54 287 287 HOH HOH A . D 3 HOH 55 288 288 HOH HOH A . D 3 HOH 56 289 289 HOH HOH A . D 3 HOH 57 290 290 HOH HOH A . D 3 HOH 58 291 291 HOH HOH A . D 3 HOH 59 292 292 HOH HOH A . D 3 HOH 60 293 293 HOH HOH A . D 3 HOH 61 294 294 HOH HOH A . D 3 HOH 62 295 295 HOH HOH A . D 3 HOH 63 296 296 HOH HOH A . D 3 HOH 64 297 297 HOH HOH A . D 3 HOH 65 298 298 HOH HOH A . D 3 HOH 66 299 299 HOH HOH A . D 3 HOH 67 300 300 HOH HOH A . D 3 HOH 68 301 301 HOH HOH A . D 3 HOH 69 302 302 HOH HOH A . D 3 HOH 70 303 303 HOH HOH A . D 3 HOH 71 304 304 HOH HOH A . D 3 HOH 72 305 305 HOH HOH A . D 3 HOH 73 306 306 HOH HOH A . D 3 HOH 74 307 307 HOH HOH A . D 3 HOH 75 308 308 HOH HOH A . D 3 HOH 76 309 309 HOH HOH A . D 3 HOH 77 310 310 HOH HOH A . D 3 HOH 78 311 311 HOH HOH A . D 3 HOH 79 312 312 HOH HOH A . D 3 HOH 80 313 313 HOH HOH A . D 3 HOH 81 314 314 HOH HOH A . D 3 HOH 82 315 315 HOH HOH A . D 3 HOH 83 316 316 HOH HOH A . D 3 HOH 84 317 317 HOH HOH A . D 3 HOH 85 318 318 HOH HOH A . D 3 HOH 86 319 319 HOH HOH A . D 3 HOH 87 320 320 HOH HOH A . D 3 HOH 88 321 321 HOH HOH A . D 3 HOH 89 322 322 HOH HOH A . D 3 HOH 90 323 323 HOH HOH A . D 3 HOH 91 324 324 HOH HOH A . D 3 HOH 92 325 325 HOH HOH A . D 3 HOH 93 326 326 HOH HOH A . D 3 HOH 94 327 327 HOH HOH A . D 3 HOH 95 328 328 HOH HOH A . D 3 HOH 96 329 329 HOH HOH A . D 3 HOH 97 330 330 HOH HOH A . D 3 HOH 98 331 331 HOH HOH A . D 3 HOH 99 332 332 HOH HOH A . D 3 HOH 100 333 333 HOH HOH A . D 3 HOH 101 334 334 HOH HOH A . D 3 HOH 102 335 335 HOH HOH A . D 3 HOH 103 336 336 HOH HOH A . D 3 HOH 104 337 337 HOH HOH A . D 3 HOH 105 338 338 HOH HOH A . D 3 HOH 106 339 339 HOH HOH A . D 3 HOH 107 340 340 HOH HOH A . D 3 HOH 108 341 341 HOH HOH A . D 3 HOH 109 342 342 HOH HOH A . D 3 HOH 110 343 343 HOH HOH A . D 3 HOH 111 344 344 HOH HOH A . D 3 HOH 112 345 345 HOH HOH A . D 3 HOH 113 346 346 HOH HOH A . D 3 HOH 114 347 347 HOH HOH A . D 3 HOH 115 348 348 HOH HOH A . D 3 HOH 116 349 349 HOH HOH A . D 3 HOH 117 350 350 HOH HOH A . D 3 HOH 118 351 351 HOH HOH A . D 3 HOH 119 352 352 HOH HOH A . D 3 HOH 120 353 353 HOH HOH A . D 3 HOH 121 354 354 HOH HOH A . D 3 HOH 122 355 355 HOH HOH A . D 3 HOH 123 356 356 HOH HOH A . D 3 HOH 124 357 357 HOH HOH A . D 3 HOH 125 358 358 HOH HOH A . D 3 HOH 126 359 359 HOH HOH A . D 3 HOH 127 360 360 HOH HOH A . D 3 HOH 128 361 361 HOH HOH A . D 3 HOH 129 362 362 HOH HOH A . D 3 HOH 130 363 363 HOH HOH A . D 3 HOH 131 364 364 HOH HOH A . D 3 HOH 132 365 365 HOH HOH A . D 3 HOH 133 366 366 HOH HOH A . D 3 HOH 134 367 367 HOH HOH A . D 3 HOH 135 368 368 HOH HOH A . D 3 HOH 136 369 369 HOH HOH A . D 3 HOH 137 370 370 HOH HOH A . D 3 HOH 138 371 371 HOH HOH A . D 3 HOH 139 372 372 HOH HOH A . D 3 HOH 140 373 373 HOH HOH A . D 3 HOH 141 374 374 HOH HOH A . D 3 HOH 142 375 375 HOH HOH A . D 3 HOH 143 376 376 HOH HOH A . D 3 HOH 144 377 377 HOH HOH A . D 3 HOH 145 378 378 HOH HOH A . D 3 HOH 146 379 379 HOH HOH A . D 3 HOH 147 380 380 HOH HOH A . D 3 HOH 148 381 381 HOH HOH A . D 3 HOH 149 382 382 HOH HOH A . D 3 HOH 150 383 383 HOH HOH A . D 3 HOH 151 384 384 HOH HOH A . D 3 HOH 152 385 385 HOH HOH A . D 3 HOH 153 386 386 HOH HOH A . D 3 HOH 154 387 387 HOH HOH A . D 3 HOH 155 388 3 HOH HOH A . D 3 HOH 156 389 4 HOH HOH A . D 3 HOH 157 390 5 HOH HOH A . D 3 HOH 158 391 6 HOH HOH A . D 3 HOH 159 392 7 HOH HOH A . D 3 HOH 160 393 8 HOH HOH A . D 3 HOH 161 394 9 HOH HOH A . D 3 HOH 162 395 10 HOH HOH A . D 3 HOH 163 396 11 HOH HOH A . D 3 HOH 164 397 12 HOH HOH A . D 3 HOH 165 398 13 HOH HOH A . D 3 HOH 166 399 14 HOH HOH A . D 3 HOH 167 400 15 HOH HOH A . D 3 HOH 168 401 16 HOH HOH A . D 3 HOH 169 402 17 HOH HOH A . D 3 HOH 170 403 18 HOH HOH A . D 3 HOH 171 404 19 HOH HOH A . D 3 HOH 172 405 20 HOH HOH A . D 3 HOH 173 406 21 HOH HOH A . D 3 HOH 174 407 22 HOH HOH A . D 3 HOH 175 408 23 HOH HOH A . D 3 HOH 176 409 24 HOH HOH A . D 3 HOH 177 410 25 HOH HOH A . D 3 HOH 178 411 26 HOH HOH A . D 3 HOH 179 412 27 HOH HOH A . D 3 HOH 180 413 28 HOH HOH A . D 3 HOH 181 414 29 HOH HOH A . D 3 HOH 182 415 30 HOH HOH A . D 3 HOH 183 416 31 HOH HOH A . D 3 HOH 184 417 32 HOH HOH A . D 3 HOH 185 418 33 HOH HOH A . D 3 HOH 186 419 34 HOH HOH A . D 3 HOH 187 420 35 HOH HOH A . D 3 HOH 188 421 36 HOH HOH A . D 3 HOH 189 422 37 HOH HOH A . D 3 HOH 190 423 38 HOH HOH A . D 3 HOH 191 424 39 HOH HOH A . D 3 HOH 192 425 40 HOH HOH A . D 3 HOH 193 426 41 HOH HOH A . D 3 HOH 194 427 42 HOH HOH A . D 3 HOH 195 428 43 HOH HOH A . D 3 HOH 196 429 44 HOH HOH A . D 3 HOH 197 430 45 HOH HOH A . D 3 HOH 198 431 46 HOH HOH A . D 3 HOH 199 432 47 HOH HOH A . D 3 HOH 200 433 48 HOH HOH A . D 3 HOH 201 434 49 HOH HOH A . D 3 HOH 202 435 50 HOH HOH A . D 3 HOH 203 436 51 HOH HOH A . D 3 HOH 204 437 52 HOH HOH A . D 3 HOH 205 438 53 HOH HOH A . D 3 HOH 206 439 54 HOH HOH A . D 3 HOH 207 440 55 HOH HOH A . D 3 HOH 208 441 56 HOH HOH A . D 3 HOH 209 442 57 HOH HOH A . D 3 HOH 210 443 58 HOH HOH A . D 3 HOH 211 444 59 HOH HOH A . D 3 HOH 212 445 60 HOH HOH A . D 3 HOH 213 446 61 HOH HOH A . D 3 HOH 214 447 62 HOH HOH A . D 3 HOH 215 448 63 HOH HOH A . D 3 HOH 216 449 64 HOH HOH A . D 3 HOH 217 450 65 HOH HOH A . D 3 HOH 218 451 66 HOH HOH A . D 3 HOH 219 452 67 HOH HOH A . D 3 HOH 220 453 68 HOH HOH A . D 3 HOH 221 454 69 HOH HOH A . D 3 HOH 222 455 70 HOH HOH A . D 3 HOH 223 456 71 HOH HOH A . D 3 HOH 224 457 72 HOH HOH A . D 3 HOH 225 458 73 HOH HOH A . D 3 HOH 226 459 74 HOH HOH A . D 3 HOH 227 460 75 HOH HOH A . D 3 HOH 228 461 76 HOH HOH A . D 3 HOH 229 462 77 HOH HOH A . D 3 HOH 230 463 78 HOH HOH A . D 3 HOH 231 464 79 HOH HOH A . D 3 HOH 232 465 80 HOH HOH A . D 3 HOH 233 466 81 HOH HOH A . D 3 HOH 234 467 82 HOH HOH A . D 3 HOH 235 468 83 HOH HOH A . D 3 HOH 236 469 84 HOH HOH A . D 3 HOH 237 470 85 HOH HOH A . D 3 HOH 238 471 86 HOH HOH A . D 3 HOH 239 472 87 HOH HOH A . D 3 HOH 240 473 88 HOH HOH A . D 3 HOH 241 474 89 HOH HOH A . D 3 HOH 242 475 90 HOH HOH A . D 3 HOH 243 476 91 HOH HOH A . D 3 HOH 244 477 92 HOH HOH A . D 3 HOH 245 478 93 HOH HOH A . D 3 HOH 246 479 94 HOH HOH A . D 3 HOH 247 480 95 HOH HOH A . D 3 HOH 248 481 96 HOH HOH A . D 3 HOH 249 482 97 HOH HOH A . D 3 HOH 250 483 98 HOH HOH A . D 3 HOH 251 484 99 HOH HOH A . D 3 HOH 252 485 100 HOH HOH A . D 3 HOH 253 486 101 HOH HOH A . D 3 HOH 254 487 102 HOH HOH A . D 3 HOH 255 488 103 HOH HOH A . D 3 HOH 256 489 104 HOH HOH A . D 3 HOH 257 490 105 HOH HOH A . D 3 HOH 258 491 106 HOH HOH A . D 3 HOH 259 492 107 HOH HOH A . D 3 HOH 260 493 108 HOH HOH A . D 3 HOH 261 494 109 HOH HOH A . D 3 HOH 262 495 110 HOH HOH A . D 3 HOH 263 496 111 HOH HOH A . D 3 HOH 264 497 112 HOH HOH A . D 3 HOH 265 498 113 HOH HOH A . D 3 HOH 266 499 114 HOH HOH A . D 3 HOH 267 500 115 HOH HOH A . D 3 HOH 268 501 116 HOH HOH A . D 3 HOH 269 502 117 HOH HOH A . D 3 HOH 270 503 118 HOH HOH A . D 3 HOH 271 504 119 HOH HOH A . D 3 HOH 272 505 120 HOH HOH A . D 3 HOH 273 506 121 HOH HOH A . D 3 HOH 274 507 122 HOH HOH A . D 3 HOH 275 508 123 HOH HOH A . D 3 HOH 276 509 124 HOH HOH A . D 3 HOH 277 510 125 HOH HOH A . D 3 HOH 278 511 126 HOH HOH A . D 3 HOH 279 512 127 HOH HOH A . D 3 HOH 280 513 128 HOH HOH A . D 3 HOH 281 514 129 HOH HOH A . D 3 HOH 282 515 130 HOH HOH A . D 3 HOH 283 516 131 HOH HOH A . D 3 HOH 284 517 132 HOH HOH A . D 3 HOH 285 518 133 HOH HOH A . D 3 HOH 286 519 134 HOH HOH A . D 3 HOH 287 520 135 HOH HOH A . D 3 HOH 288 521 136 HOH HOH A . D 3 HOH 289 522 137 HOH HOH A . D 3 HOH 290 523 138 HOH HOH A . D 3 HOH 291 524 139 HOH HOH A . D 3 HOH 292 525 140 HOH HOH A . D 3 HOH 293 526 141 HOH HOH A . D 3 HOH 294 527 142 HOH HOH A . D 3 HOH 295 528 143 HOH HOH A . D 3 HOH 296 529 144 HOH HOH A . D 3 HOH 297 530 145 HOH HOH A . D 3 HOH 298 531 146 HOH HOH A . D 3 HOH 299 532 147 HOH HOH A . D 3 HOH 300 533 148 HOH HOH A . D 3 HOH 301 534 149 HOH HOH A . D 3 HOH 302 535 150 HOH HOH A . D 3 HOH 303 536 151 HOH HOH A . D 3 HOH 304 537 152 HOH HOH A . D 3 HOH 305 538 153 HOH HOH A . D 3 HOH 306 539 154 HOH HOH A . D 3 HOH 307 540 155 HOH HOH A . D 3 HOH 308 541 156 HOH HOH A . D 3 HOH 309 542 157 HOH HOH A . D 3 HOH 310 543 158 HOH HOH A . D 3 HOH 311 544 159 HOH HOH A . D 3 HOH 312 545 160 HOH HOH A . D 3 HOH 313 546 161 HOH HOH A . D 3 HOH 314 547 162 HOH HOH A . D 3 HOH 315 548 163 HOH HOH A . D 3 HOH 316 549 164 HOH HOH A . D 3 HOH 317 550 165 HOH HOH A . D 3 HOH 318 551 166 HOH HOH A . D 3 HOH 319 552 167 HOH HOH A . D 3 HOH 320 553 168 HOH HOH A . D 3 HOH 321 554 169 HOH HOH A . D 3 HOH 322 555 170 HOH HOH A . D 3 HOH 323 556 171 HOH HOH A . D 3 HOH 324 557 172 HOH HOH A . D 3 HOH 325 558 173 HOH HOH A . D 3 HOH 326 559 174 HOH HOH A . D 3 HOH 327 560 175 HOH HOH A . D 3 HOH 328 561 176 HOH HOH A . D 3 HOH 329 562 177 HOH HOH A . D 3 HOH 330 563 178 HOH HOH A . D 3 HOH 331 564 179 HOH HOH A . D 3 HOH 332 565 180 HOH HOH A . D 3 HOH 333 566 181 HOH HOH A . D 3 HOH 334 567 182 HOH HOH A . D 3 HOH 335 568 183 HOH HOH A . D 3 HOH 336 569 184 HOH HOH A . D 3 HOH 337 570 185 HOH HOH A . D 3 HOH 338 571 186 HOH HOH A . D 3 HOH 339 572 187 HOH HOH A . D 3 HOH 340 573 188 HOH HOH A . D 3 HOH 341 574 189 HOH HOH A . D 3 HOH 342 575 190 HOH HOH A . D 3 HOH 343 576 191 HOH HOH A . D 3 HOH 344 577 192 HOH HOH A . D 3 HOH 345 578 193 HOH HOH A . D 3 HOH 346 579 194 HOH HOH A . D 3 HOH 347 580 195 HOH HOH A . D 3 HOH 348 581 196 HOH HOH A . D 3 HOH 349 582 197 HOH HOH A . D 3 HOH 350 583 198 HOH HOH A . D 3 HOH 351 584 199 HOH HOH A . D 3 HOH 352 585 200 HOH HOH A . D 3 HOH 353 586 201 HOH HOH A . D 3 HOH 354 587 202 HOH HOH A . D 3 HOH 355 588 203 HOH HOH A . D 3 HOH 356 589 204 HOH HOH A . D 3 HOH 357 590 205 HOH HOH A . D 3 HOH 358 591 206 HOH HOH A . D 3 HOH 359 592 207 HOH HOH A . D 3 HOH 360 593 208 HOH HOH A . D 3 HOH 361 594 209 HOH HOH A . D 3 HOH 362 595 210 HOH HOH A . D 3 HOH 363 596 211 HOH HOH A . D 3 HOH 364 597 212 HOH HOH A . D 3 HOH 365 598 213 HOH HOH A . D 3 HOH 366 599 214 HOH HOH A . D 3 HOH 367 600 215 HOH HOH A . D 3 HOH 368 601 216 HOH HOH A . D 3 HOH 369 602 217 HOH HOH A . D 3 HOH 370 603 218 HOH HOH A . D 3 HOH 371 604 219 HOH HOH A . D 3 HOH 372 605 220 HOH HOH A . D 3 HOH 373 606 221 HOH HOH A . D 3 HOH 374 607 222 HOH HOH A . D 3 HOH 375 608 223 HOH HOH A . D 3 HOH 376 609 224 HOH HOH A . D 3 HOH 377 610 225 HOH HOH A . D 3 HOH 378 611 226 HOH HOH A . D 3 HOH 379 612 227 HOH HOH A . D 3 HOH 380 613 228 HOH HOH A . D 3 HOH 381 614 229 HOH HOH A . D 3 HOH 382 615 230 HOH HOH A . D 3 HOH 383 616 231 HOH HOH A . D 3 HOH 384 617 232 HOH HOH A . D 3 HOH 385 618 233 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 102 A MSE 101 ? MET SELENOMETHIONINE 3 A MSE 135 A MSE 134 ? MET SELENOMETHIONINE 4 A MSE 178 A MSE 177 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-02-23 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 4 'Structure model' 1 3 2019-07-17 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' software 3 4 'Structure model' struct_conn 4 5 'Structure model' database_2 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.5.0102 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 5 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? 7 SHELXD . ? ? ? ? phasing ? ? ? 8 autoSHARP . ? ? ? ? phasing ? ? ? 9 # _pdbx_entry_details.entry_id 3LHI _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 56 ? ? CG A ASP 56 ? ? OD1 A ASP 56 ? ? 124.46 118.30 6.16 0.90 N 2 1 NE A ARG 210 ? A CZ A ARG 210 ? A NH2 A ARG 210 ? A 117.16 120.30 -3.14 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 91 ? ? 54.60 -142.70 2 1 ALA A 141 ? ? 42.09 -134.47 3 1 VAL A 168 ? ? 77.44 -49.35 4 1 HIS A 172 ? ? 79.96 134.78 5 1 ARG A 210 ? B -34.52 -38.07 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A MSE 1 ? CG ? A MSE 2 CG 2 1 Y 1 A MSE 1 ? SE ? A MSE 2 SE 3 1 Y 1 A MSE 1 ? CE ? A MSE 2 CE 4 1 Y 1 A GLU 8 ? CG ? A GLU 9 CG 5 1 Y 1 A GLU 8 ? CD ? A GLU 9 CD 6 1 Y 1 A GLU 8 ? OE1 ? A GLU 9 OE1 7 1 Y 1 A GLU 8 ? OE2 ? A GLU 9 OE2 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id GLY _pdbx_unobs_or_zero_occ_residues.auth_seq_id 0 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id GLY _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 water HOH #