data_3LHN # _entry.id 3LHN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3LHN pdb_00003lhn 10.2210/pdb3lhn/pdb RCSB RCSB057288 ? ? WWPDB D_1000057288 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 365930 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3LHN _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-01-22 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of putative lipoprotein (NP_718719.1) from Shewanella oneidensis at 1.42 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3LHN _cell.length_a 50.185 _cell.length_b 50.185 _cell.length_c 300.508 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 24 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3LHN _symmetry.Int_Tables_number 178 _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Lipoprotein 13551.774 2 ? ? 'sequence database residues 26-150' ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 4 water nat water 18.015 228 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GAPSQGATANAETQTTIPLGDTSQNALDWPGVYEGVLPCASCEGIQTTLTLQADNSFELKSIYLGKDESIFKVAGKFDWD SNGSKITLSDGSKYLVGENQLL(MSE)LDTEGNRITGGLAEHYILKKKG(MSE) ; _entity_poly.pdbx_seq_one_letter_code_can ;GAPSQGATANAETQTTIPLGDTSQNALDWPGVYEGVLPCASCEGIQTTLTLQADNSFELKSIYLGKDESIFKVAGKFDWD SNGSKITLSDGSKYLVGENQLLMLDTEGNRITGGLAEHYILKKKGM ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier 365930 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 PRO n 1 4 SER n 1 5 GLN n 1 6 GLY n 1 7 ALA n 1 8 THR n 1 9 ALA n 1 10 ASN n 1 11 ALA n 1 12 GLU n 1 13 THR n 1 14 GLN n 1 15 THR n 1 16 THR n 1 17 ILE n 1 18 PRO n 1 19 LEU n 1 20 GLY n 1 21 ASP n 1 22 THR n 1 23 SER n 1 24 GLN n 1 25 ASN n 1 26 ALA n 1 27 LEU n 1 28 ASP n 1 29 TRP n 1 30 PRO n 1 31 GLY n 1 32 VAL n 1 33 TYR n 1 34 GLU n 1 35 GLY n 1 36 VAL n 1 37 LEU n 1 38 PRO n 1 39 CYS n 1 40 ALA n 1 41 SER n 1 42 CYS n 1 43 GLU n 1 44 GLY n 1 45 ILE n 1 46 GLN n 1 47 THR n 1 48 THR n 1 49 LEU n 1 50 THR n 1 51 LEU n 1 52 GLN n 1 53 ALA n 1 54 ASP n 1 55 ASN n 1 56 SER n 1 57 PHE n 1 58 GLU n 1 59 LEU n 1 60 LYS n 1 61 SER n 1 62 ILE n 1 63 TYR n 1 64 LEU n 1 65 GLY n 1 66 LYS n 1 67 ASP n 1 68 GLU n 1 69 SER n 1 70 ILE n 1 71 PHE n 1 72 LYS n 1 73 VAL n 1 74 ALA n 1 75 GLY n 1 76 LYS n 1 77 PHE n 1 78 ASP n 1 79 TRP n 1 80 ASP n 1 81 SER n 1 82 ASN n 1 83 GLY n 1 84 SER n 1 85 LYS n 1 86 ILE n 1 87 THR n 1 88 LEU n 1 89 SER n 1 90 ASP n 1 91 GLY n 1 92 SER n 1 93 LYS n 1 94 TYR n 1 95 LEU n 1 96 VAL n 1 97 GLY n 1 98 GLU n 1 99 ASN n 1 100 GLN n 1 101 LEU n 1 102 LEU n 1 103 MSE n 1 104 LEU n 1 105 ASP n 1 106 THR n 1 107 GLU n 1 108 GLY n 1 109 ASN n 1 110 ARG n 1 111 ILE n 1 112 THR n 1 113 GLY n 1 114 GLY n 1 115 LEU n 1 116 ALA n 1 117 GLU n 1 118 HIS n 1 119 TYR n 1 120 ILE n 1 121 LEU n 1 122 LYS n 1 123 LYS n 1 124 LYS n 1 125 GLY n 1 126 MSE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene SO_3163 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Shewanella oneidensis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 70863 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedETS _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8ECH9_SHEON _struct_ref.pdbx_db_accession Q8ECH9 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;APSQGATANAETQTTIPLGDTSQNALDWPGVYEGVLPCASCEGIQTTLTLQADNSFELKSIYLGKDESIFKVAGKFDWDS NGSKITLSDGSKYLVGENQLLMLDTEGNRITGGLAEHYILKKKGM ; _struct_ref.pdbx_align_begin 26 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3LHN A 2 ? 126 ? Q8ECH9 26 ? 150 ? 26 150 2 1 3LHN B 2 ? 126 ? Q8ECH9 26 ? 150 ? 26 150 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3LHN GLY A 1 ? UNP Q8ECH9 ? ? 'expression tag' 0 1 2 3LHN GLY B 1 ? UNP Q8ECH9 ? ? 'expression tag' 0 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3LHN # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.02 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 38.96 _exptl_crystal.description 'DATA WERE SCALED USING XSCALE WITH FRIEDEL PAIRS KEPT AS SEPARATE WHEN COMPUTING R-SYM, COMPLETENESS AND ' _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details ;1.6000M ammonium sulfate, 0.1M citric acid pH 5.0, 0.001 M copper (II) chloride, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 293K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2009-07-07 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97932 1.0 3 0.97882 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list 0.91837,0.97932,0.97882 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3LHN _reflns.d_resolution_high 1.42 _reflns.d_resolution_low 28.421 _reflns.number_obs 43813 _reflns.pdbx_Rmerge_I_obs 0.035 _reflns.pdbx_netI_over_sigmaI 18.520 _reflns.percent_possible_obs 98.700 _reflns.B_iso_Wilson_estimate 16.807 _reflns.observed_criterion_sigma_I -3.00 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.42 1.47 16359 ? 7469 0.492 1.7 ? ? ? ? ? 94.30 1 1 1.47 1.53 23881 ? 8004 0.347 2.8 ? ? ? ? ? 98.30 2 1 1.53 1.60 29864 ? 7951 0.253 4.4 ? ? ? ? ? 99.30 3 1 1.60 1.68 28647 ? 7606 0.178 6.2 ? ? ? ? ? 99.30 4 1 1.68 1.79 31426 ? 8308 0.122 9.0 ? ? ? ? ? 99.30 5 1 1.79 1.93 30540 ? 8066 0.072 14.6 ? ? ? ? ? 99.50 6 1 1.93 2.12 29559 ? 7724 0.046 22.4 ? ? ? ? ? 99.60 7 1 2.12 2.43 30838 ? 8033 0.035 30.2 ? ? ? ? ? 99.50 8 1 2.43 3.06 30622 ? 7951 0.027 39.2 ? ? ? ? ? 99.60 9 1 3.06 28.421 30908 ? 7996 0.019 53.5 ? ? ? ? ? 98.80 10 1 # _refine.entry_id 3LHN _refine.ls_d_res_high 1.420 _refine.ls_d_res_low 28.421 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.290 _refine.ls_number_reflns_obs 43647 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1.HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4.A SULFATE ION(SO4) FROM CRYSTALLIZATION AND GLYCEROL MOLECULES(GOL) FROM CRYOPROTECTANT ARE MODELED IN THE STRUCTURE. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.173 _refine.ls_R_factor_R_work 0.172 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.181 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 2191 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 14.711 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.820 _refine.aniso_B[2][2] 0.820 _refine.aniso_B[3][3] -1.230 _refine.aniso_B[1][2] 0.410 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.966 _refine.correlation_coeff_Fo_to_Fc_free 0.967 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.063 _refine.pdbx_overall_ESU_R_Free 0.059 _refine.overall_SU_ML 0.039 _refine.overall_SU_B 2.231 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 56.82 _refine.B_iso_min 4.74 _refine.occupancy_max 1.00 _refine.occupancy_min 0.07 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1622 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 17 _refine_hist.number_atoms_solvent 228 _refine_hist.number_atoms_total 1867 _refine_hist.d_res_high 1.420 _refine_hist.d_res_low 28.421 # loop_ _refine_ls_restr.type _refine_ls_restr.pdbx_refine_id _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 'X-RAY DIFFRACTION' 1928 0.018 0.022 ? ? r_bond_other_d 'X-RAY DIFFRACTION' 1295 0.001 0.020 ? ? r_angle_refined_deg 'X-RAY DIFFRACTION' 2620 1.772 1.986 ? ? r_angle_other_deg 'X-RAY DIFFRACTION' 3202 0.910 3.002 ? ? r_dihedral_angle_1_deg 'X-RAY DIFFRACTION' 261 5.672 5.000 ? ? r_dihedral_angle_2_deg 'X-RAY DIFFRACTION' 77 28.708 26.753 ? ? r_dihedral_angle_3_deg 'X-RAY DIFFRACTION' 351 11.864 15.000 ? ? r_dihedral_angle_4_deg 'X-RAY DIFFRACTION' 2 12.091 15.000 ? ? r_chiral_restr 'X-RAY DIFFRACTION' 279 0.084 0.200 ? ? r_gen_planes_refined 'X-RAY DIFFRACTION' 2239 0.008 0.020 ? ? r_gen_planes_other 'X-RAY DIFFRACTION' 355 0.002 0.020 ? ? r_mcbond_it 'X-RAY DIFFRACTION' 1218 1.195 2.000 ? ? r_mcbond_other 'X-RAY DIFFRACTION' 509 0.303 2.000 ? ? r_mcangle_it 'X-RAY DIFFRACTION' 1967 2.027 3.000 ? ? r_scbond_it 'X-RAY DIFFRACTION' 710 1.881 2.000 ? ? r_scangle_it 'X-RAY DIFFRACTION' 653 3.036 3.000 ? ? # _refine_ls_shell.d_res_high 1.421 _refine_ls_shell.d_res_low 1.458 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 97.920 _refine_ls_shell.number_reflns_R_work 2950 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.286 _refine_ls_shell.R_factor_R_free 0.261 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 150 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 3100 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3LHN _struct.title 'Crystal structure of putative lipoprotein (NP_718719.1) from Shewanella oneidensis at 1.42 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text 'Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, LIPID BINDING PROTEIN' _struct_keywords.pdbx_keywords 'LIPID BINDING PROTEIN' _struct_keywords.entry_id 3LHN # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 4 ? G N N 4 ? # _struct_biol.id 1 _struct_biol.details ;ANALYTICAL SIZE EXCLUSION CHROMATOGRAPHY SUGGESTS A DIMER AS A SIGNIFICANT OLIGOMERIZATION STATE IN SOLUTION. CRYSTAL PACKING SUPPORTS THE ASSIGNMENT OF A DIMER AS SIGNIFICANT OLIGOMERIZATION STATES. ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 22 ? LEU A 27 ? THR A 46 LEU A 51 1 ? 6 HELX_P HELX_P2 2 LEU A 115 ? HIS A 118 ? LEU A 139 HIS A 142 5 ? 4 HELX_P HELX_P3 3 THR B 22 ? LEU B 27 ? THR B 46 LEU B 51 1 ? 6 HELX_P HELX_P4 4 LEU B 115 ? HIS B 118 ? LEU B 139 HIS B 142 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 39 SG ? ? ? 1_555 A CYS 42 SG ? ? A CYS 63 A CYS 66 1_555 ? ? ? ? ? ? ? 2.118 ? ? disulf2 disulf ? ? B CYS 39 SG ? ? ? 1_555 B CYS 42 SG ? ? B CYS 63 B CYS 66 1_555 ? ? ? ? ? ? ? 2.125 ? ? covale1 covale both ? A LEU 102 C ? ? ? 1_555 A MSE 103 N A ? A LEU 126 A MSE 127 1_555 ? ? ? ? ? ? ? 1.343 ? ? covale2 covale both ? A LEU 102 C ? ? ? 1_555 A MSE 103 N B ? A LEU 126 A MSE 127 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale3 covale both ? A MSE 103 C A ? ? 1_555 A LEU 104 N ? ? A MSE 127 A LEU 128 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale4 covale both ? A MSE 103 C B ? ? 1_555 A LEU 104 N ? ? A MSE 127 A LEU 128 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale5 covale both ? A GLY 125 C A ? ? 1_555 A MSE 126 N A ? A GLY 149 A MSE 150 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale6 covale both ? A GLY 125 C B ? ? 1_555 A MSE 126 N B ? A GLY 149 A MSE 150 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale7 covale both ? B LEU 102 C ? ? ? 1_555 B MSE 103 N A ? B LEU 126 B MSE 127 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale8 covale both ? B LEU 102 C ? ? ? 1_555 B MSE 103 N B ? B LEU 126 B MSE 127 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale9 covale both ? B MSE 103 C A ? ? 1_555 B LEU 104 N ? ? B MSE 127 B LEU 128 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale10 covale both ? B MSE 103 C B ? ? 1_555 B LEU 104 N ? ? B MSE 127 B LEU 128 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale11 covale both ? B GLY 125 C ? ? ? 1_555 B MSE 126 N A ? B GLY 149 B MSE 150 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale12 covale both ? B GLY 125 C ? ? ? 1_555 B MSE 126 N B ? B GLY 149 B MSE 150 1_555 ? ? ? ? ? ? ? 1.330 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 9 ? B ? 9 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel B 8 9 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 31 ? LEU A 37 ? GLY A 55 LEU A 61 A 2 GLY A 44 ? LEU A 51 ? GLY A 68 LEU A 75 A 3 SER A 56 ? LEU A 64 ? SER A 80 LEU A 88 A 4 SER A 69 ? TRP A 79 ? SER A 93 TRP A 103 A 5 LYS A 85 ? LEU A 88 ? LYS A 109 LEU A 112 A 6 LYS A 93 ? GLY A 97 ? LYS A 117 GLY A 121 A 7 GLN A 100 ? MSE A 103 ? GLN A 124 MSE A 127 A 8 ILE A 120 ? LYS A 123 ? ILE A 144 LYS A 147 A 9 GLY A 31 ? LEU A 37 ? GLY A 55 LEU A 61 B 1 SER B 69 ? LYS B 76 ? SER B 93 LYS B 100 B 2 SER B 56 ? TYR B 63 ? SER B 80 TYR B 87 B 3 ILE B 45 ? LEU B 51 ? ILE B 69 LEU B 75 B 4 GLY B 31 ? LEU B 37 ? GLY B 55 LEU B 61 B 5 ILE B 120 ? LYS B 123 ? ILE B 144 LYS B 147 B 6 GLN B 100 ? MSE B 103 ? GLN B 124 MSE B 127 B 7 LYS B 93 ? GLY B 97 ? LYS B 117 GLY B 121 B 8 LYS B 85 ? THR B 87 ? LYS B 109 THR B 111 B 9 ASP B 78 ? TRP B 79 ? ASP B 102 TRP B 103 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLY A 35 ? N GLY A 59 O THR A 47 ? O THR A 71 A 2 3 N THR A 50 ? N THR A 74 O GLU A 58 ? O GLU A 82 A 3 4 N LEU A 59 ? N LEU A 83 O VAL A 73 ? O VAL A 97 A 4 5 N ASP A 78 ? N ASP A 102 O THR A 87 ? O THR A 111 A 5 6 N ILE A 86 ? N ILE A 110 O TYR A 94 ? O TYR A 118 A 6 7 N GLY A 97 ? N GLY A 121 O GLN A 100 ? O GLN A 124 A 7 8 N LEU A 101 ? N LEU A 125 O LEU A 121 ? O LEU A 145 A 8 9 O LYS A 122 ? O LYS A 146 N GLU A 34 ? N GLU A 58 B 1 2 O VAL B 73 ? O VAL B 97 N LEU B 59 ? N LEU B 83 B 2 3 O LYS B 60 ? O LYS B 84 N THR B 48 ? N THR B 72 B 3 4 O THR B 47 ? O THR B 71 N GLY B 35 ? N GLY B 59 B 4 5 N GLU B 34 ? N GLU B 58 O LYS B 122 ? O LYS B 146 B 5 6 O LEU B 121 ? O LEU B 145 N LEU B 101 ? N LEU B 125 B 6 7 O GLN B 100 ? O GLN B 124 N GLY B 97 ? N GLY B 121 B 7 8 O TYR B 94 ? O TYR B 118 N ILE B 86 ? N ILE B 110 B 8 9 O THR B 87 ? O THR B 111 N ASP B 78 ? N ASP B 102 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 1 ? 5 'BINDING SITE FOR RESIDUE SO4 A 1' AC2 Software A GOL 2 ? 10 'BINDING SITE FOR RESIDUE GOL A 2' AC3 Software B GOL 3 ? 10 'BINDING SITE FOR RESIDUE GOL B 3' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ASN A 109 ? ASN A 133 . ? 1_555 ? 2 AC1 5 ARG A 110 ? ARG A 134 . ? 1_555 ? 3 AC1 5 HOH F . ? HOH A 177 . ? 1_555 ? 4 AC1 5 HOH F . ? HOH A 233 . ? 1_555 ? 5 AC1 5 LYS B 66 ? LYS B 90 . ? 1_555 ? 6 AC2 10 VAL A 36 ? VAL A 60 . ? 1_555 ? 7 AC2 10 LEU A 37 ? LEU A 61 . ? 1_555 ? 8 AC2 10 PRO A 38 ? PRO A 62 . ? 1_555 ? 9 AC2 10 GLU A 43 ? GLU A 67 . ? 1_555 ? 10 AC2 10 GLY A 44 ? GLY A 68 . ? 1_555 ? 11 AC2 10 HIS A 118 ? HIS A 142 . ? 1_555 ? 12 AC2 10 HOH F . ? HOH A 153 . ? 1_555 ? 13 AC2 10 HOH F . ? HOH A 154 . ? 1_555 ? 14 AC2 10 HOH F . ? HOH A 216 . ? 1_555 ? 15 AC2 10 HOH F . ? HOH A 263 . ? 1_555 ? 16 AC3 10 GLY A 114 ? GLY A 138 . ? 1_555 ? 17 AC3 10 VAL B 36 ? VAL B 60 . ? 1_555 ? 18 AC3 10 LEU B 37 ? LEU B 61 . ? 1_555 ? 19 AC3 10 PRO B 38 ? PRO B 62 . ? 1_555 ? 20 AC3 10 GLU B 43 ? GLU B 67 . ? 1_555 ? 21 AC3 10 GLY B 44 ? GLY B 68 . ? 1_555 ? 22 AC3 10 HIS B 118 ? HIS B 142 . ? 1_555 ? 23 AC3 10 HOH G . ? HOH B 207 . ? 1_555 ? 24 AC3 10 HOH G . ? HOH B 221 . ? 1_555 ? 25 AC3 10 HOH G . ? HOH B 237 . ? 1_555 ? # _atom_sites.entry_id 3LHN _atom_sites.fract_transf_matrix[1][1] 0.019926 _atom_sites.fract_transf_matrix[1][2] 0.011504 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023009 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003328 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 ALA 2 26 ? ? ? A . n A 1 3 PRO 3 27 ? ? ? A . n A 1 4 SER 4 28 ? ? ? A . n A 1 5 GLN 5 29 ? ? ? A . n A 1 6 GLY 6 30 ? ? ? A . n A 1 7 ALA 7 31 ? ? ? A . n A 1 8 THR 8 32 ? ? ? A . n A 1 9 ALA 9 33 ? ? ? A . n A 1 10 ASN 10 34 ? ? ? A . n A 1 11 ALA 11 35 ? ? ? A . n A 1 12 GLU 12 36 ? ? ? A . n A 1 13 THR 13 37 ? ? ? A . n A 1 14 GLN 14 38 ? ? ? A . n A 1 15 THR 15 39 ? ? ? A . n A 1 16 THR 16 40 ? ? ? A . n A 1 17 ILE 17 41 ? ? ? A . n A 1 18 PRO 18 42 ? ? ? A . n A 1 19 LEU 19 43 43 LEU LEU A . n A 1 20 GLY 20 44 44 GLY GLY A . n A 1 21 ASP 21 45 45 ASP ASP A . n A 1 22 THR 22 46 46 THR THR A . n A 1 23 SER 23 47 47 SER SER A . n A 1 24 GLN 24 48 48 GLN GLN A . n A 1 25 ASN 25 49 49 ASN ASN A . n A 1 26 ALA 26 50 50 ALA ALA A . n A 1 27 LEU 27 51 51 LEU LEU A . n A 1 28 ASP 28 52 52 ASP ASP A . n A 1 29 TRP 29 53 53 TRP TRP A . n A 1 30 PRO 30 54 54 PRO PRO A . n A 1 31 GLY 31 55 55 GLY GLY A . n A 1 32 VAL 32 56 56 VAL VAL A . n A 1 33 TYR 33 57 57 TYR TYR A . n A 1 34 GLU 34 58 58 GLU GLU A . n A 1 35 GLY 35 59 59 GLY GLY A . n A 1 36 VAL 36 60 60 VAL VAL A . n A 1 37 LEU 37 61 61 LEU LEU A . n A 1 38 PRO 38 62 62 PRO PRO A . n A 1 39 CYS 39 63 63 CYS CYS A . n A 1 40 ALA 40 64 64 ALA ALA A . n A 1 41 SER 41 65 65 SER SER A . n A 1 42 CYS 42 66 66 CYS CYS A . n A 1 43 GLU 43 67 67 GLU GLU A . n A 1 44 GLY 44 68 68 GLY GLY A . n A 1 45 ILE 45 69 69 ILE ILE A . n A 1 46 GLN 46 70 70 GLN GLN A . n A 1 47 THR 47 71 71 THR THR A . n A 1 48 THR 48 72 72 THR THR A . n A 1 49 LEU 49 73 73 LEU LEU A . n A 1 50 THR 50 74 74 THR THR A . n A 1 51 LEU 51 75 75 LEU LEU A . n A 1 52 GLN 52 76 76 GLN GLN A . n A 1 53 ALA 53 77 77 ALA ALA A . n A 1 54 ASP 54 78 78 ASP ASP A . n A 1 55 ASN 55 79 79 ASN ASN A . n A 1 56 SER 56 80 80 SER SER A . n A 1 57 PHE 57 81 81 PHE PHE A . n A 1 58 GLU 58 82 82 GLU GLU A . n A 1 59 LEU 59 83 83 LEU LEU A . n A 1 60 LYS 60 84 84 LYS LYS A . n A 1 61 SER 61 85 85 SER SER A . n A 1 62 ILE 62 86 86 ILE ILE A . n A 1 63 TYR 63 87 87 TYR TYR A . n A 1 64 LEU 64 88 88 LEU LEU A . n A 1 65 GLY 65 89 89 GLY GLY A . n A 1 66 LYS 66 90 90 LYS LYS A . n A 1 67 ASP 67 91 91 ASP ASP A . n A 1 68 GLU 68 92 92 GLU GLU A . n A 1 69 SER 69 93 93 SER SER A . n A 1 70 ILE 70 94 94 ILE ILE A . n A 1 71 PHE 71 95 95 PHE PHE A . n A 1 72 LYS 72 96 96 LYS LYS A . n A 1 73 VAL 73 97 97 VAL VAL A . n A 1 74 ALA 74 98 98 ALA ALA A . n A 1 75 GLY 75 99 99 GLY GLY A . n A 1 76 LYS 76 100 100 LYS LYS A . n A 1 77 PHE 77 101 101 PHE PHE A . n A 1 78 ASP 78 102 102 ASP ASP A . n A 1 79 TRP 79 103 103 TRP TRP A . n A 1 80 ASP 80 104 104 ASP ASP A . n A 1 81 SER 81 105 105 SER SER A . n A 1 82 ASN 82 106 106 ASN ASN A . n A 1 83 GLY 83 107 107 GLY GLY A . n A 1 84 SER 84 108 108 SER SER A . n A 1 85 LYS 85 109 109 LYS LYS A . n A 1 86 ILE 86 110 110 ILE ILE A . n A 1 87 THR 87 111 111 THR THR A . n A 1 88 LEU 88 112 112 LEU LEU A . n A 1 89 SER 89 113 113 SER SER A . n A 1 90 ASP 90 114 114 ASP ASP A . n A 1 91 GLY 91 115 115 GLY GLY A . n A 1 92 SER 92 116 116 SER SER A . n A 1 93 LYS 93 117 117 LYS LYS A . n A 1 94 TYR 94 118 118 TYR TYR A . n A 1 95 LEU 95 119 119 LEU LEU A . n A 1 96 VAL 96 120 120 VAL VAL A . n A 1 97 GLY 97 121 121 GLY GLY A . n A 1 98 GLU 98 122 122 GLU GLU A . n A 1 99 ASN 99 123 123 ASN ASN A . n A 1 100 GLN 100 124 124 GLN GLN A . n A 1 101 LEU 101 125 125 LEU LEU A . n A 1 102 LEU 102 126 126 LEU LEU A . n A 1 103 MSE 103 127 127 MSE MSE A . n A 1 104 LEU 104 128 128 LEU LEU A . n A 1 105 ASP 105 129 129 ASP ASP A . n A 1 106 THR 106 130 130 THR THR A . n A 1 107 GLU 107 131 131 GLU GLU A . n A 1 108 GLY 108 132 132 GLY GLY A . n A 1 109 ASN 109 133 133 ASN ASN A . n A 1 110 ARG 110 134 134 ARG ARG A . n A 1 111 ILE 111 135 135 ILE ILE A . n A 1 112 THR 112 136 136 THR THR A . n A 1 113 GLY 113 137 137 GLY GLY A . n A 1 114 GLY 114 138 138 GLY GLY A . n A 1 115 LEU 115 139 139 LEU LEU A . n A 1 116 ALA 116 140 140 ALA ALA A . n A 1 117 GLU 117 141 141 GLU GLU A . n A 1 118 HIS 118 142 142 HIS HIS A . n A 1 119 TYR 119 143 143 TYR TYR A . n A 1 120 ILE 120 144 144 ILE ILE A . n A 1 121 LEU 121 145 145 LEU LEU A . n A 1 122 LYS 122 146 146 LYS LYS A . n A 1 123 LYS 123 147 147 LYS LYS A . n A 1 124 LYS 124 148 148 LYS LYS A . n A 1 125 GLY 125 149 149 GLY GLY A . n A 1 126 MSE 126 150 150 MSE MSE A . n B 1 1 GLY 1 0 ? ? ? B . n B 1 2 ALA 2 26 ? ? ? B . n B 1 3 PRO 3 27 ? ? ? B . n B 1 4 SER 4 28 ? ? ? B . n B 1 5 GLN 5 29 ? ? ? B . n B 1 6 GLY 6 30 ? ? ? B . n B 1 7 ALA 7 31 ? ? ? B . n B 1 8 THR 8 32 ? ? ? B . n B 1 9 ALA 9 33 ? ? ? B . n B 1 10 ASN 10 34 ? ? ? B . n B 1 11 ALA 11 35 ? ? ? B . n B 1 12 GLU 12 36 ? ? ? B . n B 1 13 THR 13 37 ? ? ? B . n B 1 14 GLN 14 38 ? ? ? B . n B 1 15 THR 15 39 ? ? ? B . n B 1 16 THR 16 40 ? ? ? B . n B 1 17 ILE 17 41 ? ? ? B . n B 1 18 PRO 18 42 ? ? ? B . n B 1 19 LEU 19 43 ? ? ? B . n B 1 20 GLY 20 44 44 GLY GLY B . n B 1 21 ASP 21 45 45 ASP ASP B . n B 1 22 THR 22 46 46 THR THR B . n B 1 23 SER 23 47 47 SER SER B . n B 1 24 GLN 24 48 48 GLN GLN B . n B 1 25 ASN 25 49 49 ASN ASN B . n B 1 26 ALA 26 50 50 ALA ALA B . n B 1 27 LEU 27 51 51 LEU LEU B . n B 1 28 ASP 28 52 52 ASP ASP B . n B 1 29 TRP 29 53 53 TRP TRP B . n B 1 30 PRO 30 54 54 PRO PRO B . n B 1 31 GLY 31 55 55 GLY GLY B . n B 1 32 VAL 32 56 56 VAL VAL B . n B 1 33 TYR 33 57 57 TYR TYR B . n B 1 34 GLU 34 58 58 GLU GLU B . n B 1 35 GLY 35 59 59 GLY GLY B . n B 1 36 VAL 36 60 60 VAL VAL B . n B 1 37 LEU 37 61 61 LEU LEU B . n B 1 38 PRO 38 62 62 PRO PRO B . n B 1 39 CYS 39 63 63 CYS CYS B . n B 1 40 ALA 40 64 64 ALA ALA B . n B 1 41 SER 41 65 65 SER SER B . n B 1 42 CYS 42 66 66 CYS CYS B . n B 1 43 GLU 43 67 67 GLU GLU B . n B 1 44 GLY 44 68 68 GLY GLY B . n B 1 45 ILE 45 69 69 ILE ILE B . n B 1 46 GLN 46 70 70 GLN GLN B . n B 1 47 THR 47 71 71 THR THR B . n B 1 48 THR 48 72 72 THR THR B . n B 1 49 LEU 49 73 73 LEU LEU B . n B 1 50 THR 50 74 74 THR THR B . n B 1 51 LEU 51 75 75 LEU LEU B . n B 1 52 GLN 52 76 76 GLN GLN B . n B 1 53 ALA 53 77 77 ALA ALA B . n B 1 54 ASP 54 78 78 ASP ASP B . n B 1 55 ASN 55 79 79 ASN ASN B . n B 1 56 SER 56 80 80 SER SER B . n B 1 57 PHE 57 81 81 PHE PHE B . n B 1 58 GLU 58 82 82 GLU GLU B . n B 1 59 LEU 59 83 83 LEU LEU B . n B 1 60 LYS 60 84 84 LYS LYS B . n B 1 61 SER 61 85 85 SER SER B . n B 1 62 ILE 62 86 86 ILE ILE B . n B 1 63 TYR 63 87 87 TYR TYR B . n B 1 64 LEU 64 88 88 LEU LEU B . n B 1 65 GLY 65 89 89 GLY GLY B . n B 1 66 LYS 66 90 90 LYS LYS B . n B 1 67 ASP 67 91 91 ASP ASP B . n B 1 68 GLU 68 92 92 GLU GLU B . n B 1 69 SER 69 93 93 SER SER B . n B 1 70 ILE 70 94 94 ILE ILE B . n B 1 71 PHE 71 95 95 PHE PHE B . n B 1 72 LYS 72 96 96 LYS LYS B . n B 1 73 VAL 73 97 97 VAL VAL B . n B 1 74 ALA 74 98 98 ALA ALA B . n B 1 75 GLY 75 99 99 GLY GLY B . n B 1 76 LYS 76 100 100 LYS LYS B . n B 1 77 PHE 77 101 101 PHE PHE B . n B 1 78 ASP 78 102 102 ASP ASP B . n B 1 79 TRP 79 103 103 TRP TRP B . n B 1 80 ASP 80 104 104 ASP ASP B . n B 1 81 SER 81 105 105 SER SER B . n B 1 82 ASN 82 106 106 ASN ASN B . n B 1 83 GLY 83 107 107 GLY GLY B . n B 1 84 SER 84 108 108 SER SER B . n B 1 85 LYS 85 109 109 LYS LYS B . n B 1 86 ILE 86 110 110 ILE ILE B . n B 1 87 THR 87 111 111 THR THR B . n B 1 88 LEU 88 112 112 LEU LEU B . n B 1 89 SER 89 113 113 SER SER B . n B 1 90 ASP 90 114 114 ASP ASP B . n B 1 91 GLY 91 115 115 GLY GLY B . n B 1 92 SER 92 116 116 SER SER B . n B 1 93 LYS 93 117 117 LYS LYS B . n B 1 94 TYR 94 118 118 TYR TYR B . n B 1 95 LEU 95 119 119 LEU LEU B . n B 1 96 VAL 96 120 120 VAL VAL B . n B 1 97 GLY 97 121 121 GLY GLY B . n B 1 98 GLU 98 122 122 GLU GLU B . n B 1 99 ASN 99 123 123 ASN ASN B . n B 1 100 GLN 100 124 124 GLN GLN B . n B 1 101 LEU 101 125 125 LEU LEU B . n B 1 102 LEU 102 126 126 LEU LEU B . n B 1 103 MSE 103 127 127 MSE MSE B . n B 1 104 LEU 104 128 128 LEU LEU B . n B 1 105 ASP 105 129 129 ASP ASP B . n B 1 106 THR 106 130 130 THR THR B . n B 1 107 GLU 107 131 131 GLU GLU B . n B 1 108 GLY 108 132 132 GLY GLY B . n B 1 109 ASN 109 133 133 ASN ASN B . n B 1 110 ARG 110 134 134 ARG ARG B . n B 1 111 ILE 111 135 135 ILE ILE B . n B 1 112 THR 112 136 136 THR THR B . n B 1 113 GLY 113 137 137 GLY GLY B . n B 1 114 GLY 114 138 138 GLY GLY B . n B 1 115 LEU 115 139 139 LEU LEU B . n B 1 116 ALA 116 140 140 ALA ALA B . n B 1 117 GLU 117 141 141 GLU GLU B . n B 1 118 HIS 118 142 142 HIS HIS B . n B 1 119 TYR 119 143 143 TYR TYR B . n B 1 120 ILE 120 144 144 ILE ILE B . n B 1 121 LEU 121 145 145 LEU LEU B . n B 1 122 LYS 122 146 146 LYS LYS B . n B 1 123 LYS 123 147 147 LYS LYS B . n B 1 124 LYS 124 148 148 LYS LYS B . n B 1 125 GLY 125 149 149 GLY GLY B . n B 1 126 MSE 126 150 150 MSE MSE B . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 1 1 1 SO4 SO4 A . D 3 GOL 1 2 2 GOL GOL A . E 3 GOL 1 3 3 GOL GOL B . F 4 HOH 1 4 4 HOH HOH A . F 4 HOH 2 5 5 HOH HOH A . F 4 HOH 3 6 6 HOH HOH A . F 4 HOH 4 7 7 HOH HOH A . F 4 HOH 5 8 8 HOH HOH A . F 4 HOH 6 11 11 HOH HOH A . F 4 HOH 7 14 14 HOH HOH A . F 4 HOH 8 16 16 HOH HOH A . F 4 HOH 9 18 18 HOH HOH A . F 4 HOH 10 19 19 HOH HOH A . F 4 HOH 11 20 20 HOH HOH A . F 4 HOH 12 21 21 HOH HOH A . F 4 HOH 13 151 151 HOH HOH A . F 4 HOH 14 152 152 HOH HOH A . F 4 HOH 15 153 153 HOH HOH A . F 4 HOH 16 154 154 HOH HOH A . F 4 HOH 17 155 155 HOH HOH A . F 4 HOH 18 156 156 HOH HOH A . F 4 HOH 19 157 157 HOH HOH A . F 4 HOH 20 158 158 HOH HOH A . F 4 HOH 21 159 159 HOH HOH A . F 4 HOH 22 160 160 HOH HOH A . F 4 HOH 23 161 161 HOH HOH A . F 4 HOH 24 162 162 HOH HOH A . F 4 HOH 25 163 163 HOH HOH A . F 4 HOH 26 164 164 HOH HOH A . F 4 HOH 27 165 165 HOH HOH A . F 4 HOH 28 166 166 HOH HOH A . F 4 HOH 29 167 167 HOH HOH A . F 4 HOH 30 168 168 HOH HOH A . F 4 HOH 31 169 169 HOH HOH A . F 4 HOH 32 170 170 HOH HOH A . F 4 HOH 33 171 171 HOH HOH A . F 4 HOH 34 172 172 HOH HOH A . F 4 HOH 35 173 173 HOH HOH A . F 4 HOH 36 174 174 HOH HOH A . F 4 HOH 37 175 175 HOH HOH A . F 4 HOH 38 176 176 HOH HOH A . F 4 HOH 39 177 177 HOH HOH A . F 4 HOH 40 178 178 HOH HOH A . F 4 HOH 41 179 179 HOH HOH A . F 4 HOH 42 180 180 HOH HOH A . F 4 HOH 43 181 181 HOH HOH A . F 4 HOH 44 182 182 HOH HOH A . F 4 HOH 45 183 183 HOH HOH A . F 4 HOH 46 184 184 HOH HOH A . F 4 HOH 47 185 185 HOH HOH A . F 4 HOH 48 186 186 HOH HOH A . F 4 HOH 49 187 187 HOH HOH A . F 4 HOH 50 188 188 HOH HOH A . F 4 HOH 51 189 189 HOH HOH A . F 4 HOH 52 190 190 HOH HOH A . F 4 HOH 53 191 191 HOH HOH A . F 4 HOH 54 192 192 HOH HOH A . F 4 HOH 55 193 193 HOH HOH A . F 4 HOH 56 194 194 HOH HOH A . F 4 HOH 57 195 195 HOH HOH A . F 4 HOH 58 196 196 HOH HOH A . F 4 HOH 59 197 197 HOH HOH A . F 4 HOH 60 198 198 HOH HOH A . F 4 HOH 61 199 199 HOH HOH A . F 4 HOH 62 200 200 HOH HOH A . F 4 HOH 63 201 201 HOH HOH A . F 4 HOH 64 202 202 HOH HOH A . F 4 HOH 65 203 203 HOH HOH A . F 4 HOH 66 204 204 HOH HOH A . F 4 HOH 67 205 205 HOH HOH A . F 4 HOH 68 206 206 HOH HOH A . F 4 HOH 69 207 207 HOH HOH A . F 4 HOH 70 208 208 HOH HOH A . F 4 HOH 71 209 209 HOH HOH A . F 4 HOH 72 210 210 HOH HOH A . F 4 HOH 73 211 211 HOH HOH A . F 4 HOH 74 212 212 HOH HOH A . F 4 HOH 75 213 213 HOH HOH A . F 4 HOH 76 214 214 HOH HOH A . F 4 HOH 77 215 215 HOH HOH A . F 4 HOH 78 216 216 HOH HOH A . F 4 HOH 79 217 217 HOH HOH A . F 4 HOH 80 218 218 HOH HOH A . F 4 HOH 81 219 219 HOH HOH A . F 4 HOH 82 220 220 HOH HOH A . F 4 HOH 83 221 221 HOH HOH A . F 4 HOH 84 222 222 HOH HOH A . F 4 HOH 85 223 223 HOH HOH A . F 4 HOH 86 224 224 HOH HOH A . F 4 HOH 87 225 225 HOH HOH A . F 4 HOH 88 226 226 HOH HOH A . F 4 HOH 89 227 227 HOH HOH A . F 4 HOH 90 228 228 HOH HOH A . F 4 HOH 91 229 229 HOH HOH A . F 4 HOH 92 230 230 HOH HOH A . F 4 HOH 93 231 231 HOH HOH A . F 4 HOH 94 232 232 HOH HOH A . F 4 HOH 95 233 233 HOH HOH A . F 4 HOH 96 234 234 HOH HOH A . F 4 HOH 97 235 235 HOH HOH A . F 4 HOH 98 236 236 HOH HOH A . F 4 HOH 99 237 237 HOH HOH A . F 4 HOH 100 238 238 HOH HOH A . F 4 HOH 101 239 239 HOH HOH A . F 4 HOH 102 240 240 HOH HOH A . F 4 HOH 103 241 241 HOH HOH A . F 4 HOH 104 242 242 HOH HOH A . F 4 HOH 105 243 243 HOH HOH A . F 4 HOH 106 244 244 HOH HOH A . F 4 HOH 107 245 245 HOH HOH A . F 4 HOH 108 246 246 HOH HOH A . F 4 HOH 109 247 247 HOH HOH A . F 4 HOH 110 248 248 HOH HOH A . F 4 HOH 111 249 249 HOH HOH A . F 4 HOH 112 250 250 HOH HOH A . F 4 HOH 113 251 251 HOH HOH A . F 4 HOH 114 252 252 HOH HOH A . F 4 HOH 115 253 253 HOH HOH A . F 4 HOH 116 254 254 HOH HOH A . F 4 HOH 117 255 255 HOH HOH A . F 4 HOH 118 256 256 HOH HOH A . F 4 HOH 119 257 257 HOH HOH A . F 4 HOH 120 258 258 HOH HOH A . F 4 HOH 121 259 259 HOH HOH A . F 4 HOH 122 260 260 HOH HOH A . F 4 HOH 123 261 261 HOH HOH A . F 4 HOH 124 262 262 HOH HOH A . F 4 HOH 125 263 263 HOH HOH A . F 4 HOH 126 264 264 HOH HOH A . F 4 HOH 127 265 265 HOH HOH A . F 4 HOH 128 266 266 HOH HOH A . F 4 HOH 129 267 267 HOH HOH A . F 4 HOH 130 268 268 HOH HOH A . F 4 HOH 131 269 269 HOH HOH A . G 4 HOH 1 9 9 HOH HOH B . G 4 HOH 2 10 10 HOH HOH B . G 4 HOH 3 12 12 HOH HOH B . G 4 HOH 4 13 13 HOH HOH B . G 4 HOH 5 15 15 HOH HOH B . G 4 HOH 6 17 17 HOH HOH B . G 4 HOH 7 22 22 HOH HOH B . G 4 HOH 8 23 23 HOH HOH B . G 4 HOH 9 24 24 HOH HOH B . G 4 HOH 10 151 151 HOH HOH B . G 4 HOH 11 152 152 HOH HOH B . G 4 HOH 12 153 153 HOH HOH B . G 4 HOH 13 154 154 HOH HOH B . G 4 HOH 14 155 155 HOH HOH B . G 4 HOH 15 156 156 HOH HOH B . G 4 HOH 16 157 157 HOH HOH B . G 4 HOH 17 158 158 HOH HOH B . G 4 HOH 18 159 159 HOH HOH B . G 4 HOH 19 160 160 HOH HOH B . G 4 HOH 20 161 161 HOH HOH B . G 4 HOH 21 162 162 HOH HOH B . G 4 HOH 22 163 163 HOH HOH B . G 4 HOH 23 164 164 HOH HOH B . G 4 HOH 24 165 165 HOH HOH B . G 4 HOH 25 166 166 HOH HOH B . G 4 HOH 26 167 167 HOH HOH B . G 4 HOH 27 168 168 HOH HOH B . G 4 HOH 28 169 169 HOH HOH B . G 4 HOH 29 170 170 HOH HOH B . G 4 HOH 30 171 171 HOH HOH B . G 4 HOH 31 172 172 HOH HOH B . G 4 HOH 32 173 173 HOH HOH B . G 4 HOH 33 174 174 HOH HOH B . G 4 HOH 34 175 175 HOH HOH B . G 4 HOH 35 176 176 HOH HOH B . G 4 HOH 36 177 177 HOH HOH B . G 4 HOH 37 178 178 HOH HOH B . G 4 HOH 38 179 179 HOH HOH B . G 4 HOH 39 180 180 HOH HOH B . G 4 HOH 40 181 181 HOH HOH B . G 4 HOH 41 182 182 HOH HOH B . G 4 HOH 42 183 183 HOH HOH B . G 4 HOH 43 184 184 HOH HOH B . G 4 HOH 44 185 185 HOH HOH B . G 4 HOH 45 186 186 HOH HOH B . G 4 HOH 46 187 187 HOH HOH B . G 4 HOH 47 188 188 HOH HOH B . G 4 HOH 48 189 189 HOH HOH B . G 4 HOH 49 190 190 HOH HOH B . G 4 HOH 50 191 191 HOH HOH B . G 4 HOH 51 192 192 HOH HOH B . G 4 HOH 52 193 193 HOH HOH B . G 4 HOH 53 194 194 HOH HOH B . G 4 HOH 54 195 195 HOH HOH B . G 4 HOH 55 196 196 HOH HOH B . G 4 HOH 56 197 197 HOH HOH B . G 4 HOH 57 198 198 HOH HOH B . G 4 HOH 58 199 199 HOH HOH B . G 4 HOH 59 200 200 HOH HOH B . G 4 HOH 60 201 201 HOH HOH B . G 4 HOH 61 202 202 HOH HOH B . G 4 HOH 62 203 203 HOH HOH B . G 4 HOH 63 204 204 HOH HOH B . G 4 HOH 64 205 205 HOH HOH B . G 4 HOH 65 206 206 HOH HOH B . G 4 HOH 66 207 207 HOH HOH B . G 4 HOH 67 208 208 HOH HOH B . G 4 HOH 68 209 209 HOH HOH B . G 4 HOH 69 210 210 HOH HOH B . G 4 HOH 70 211 211 HOH HOH B . G 4 HOH 71 212 212 HOH HOH B . G 4 HOH 72 213 213 HOH HOH B . G 4 HOH 73 214 214 HOH HOH B . G 4 HOH 74 215 215 HOH HOH B . G 4 HOH 75 216 216 HOH HOH B . G 4 HOH 76 217 217 HOH HOH B . G 4 HOH 77 218 218 HOH HOH B . G 4 HOH 78 219 219 HOH HOH B . G 4 HOH 79 220 220 HOH HOH B . G 4 HOH 80 221 221 HOH HOH B . G 4 HOH 81 222 222 HOH HOH B . G 4 HOH 82 223 223 HOH HOH B . G 4 HOH 83 224 224 HOH HOH B . G 4 HOH 84 225 225 HOH HOH B . G 4 HOH 85 226 226 HOH HOH B . G 4 HOH 86 227 227 HOH HOH B . G 4 HOH 87 228 228 HOH HOH B . G 4 HOH 88 229 229 HOH HOH B . G 4 HOH 89 230 230 HOH HOH B . G 4 HOH 90 231 231 HOH HOH B . G 4 HOH 91 232 232 HOH HOH B . G 4 HOH 92 233 233 HOH HOH B . G 4 HOH 93 234 234 HOH HOH B . G 4 HOH 94 235 235 HOH HOH B . G 4 HOH 95 236 236 HOH HOH B . G 4 HOH 96 237 237 HOH HOH B . G 4 HOH 97 238 238 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 103 A MSE 127 ? MET SELENOMETHIONINE 2 A MSE 126 A MSE 150 ? MET SELENOMETHIONINE 3 B MSE 103 B MSE 127 ? MET SELENOMETHIONINE 4 B MSE 126 B MSE 150 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA tetrameric 4 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2 A,B,C,D,E,F,G 2 1 A,B,C,D,E,F,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7660 ? 1 MORE -57 ? 1 'SSA (A^2)' 19140 ? 2 'ABSA (A^2)' 2560 ? 2 MORE -24 ? 2 'SSA (A^2)' 10840 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 12_555 x,x-y,-z+1/6 0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 50.0846666667 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-02-23 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2019-07-17 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Author supporting evidence' 4 3 'Structure model' 'Refinement description' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' 8 5 'Structure model' 'Database references' 9 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_struct_assembly_auth_evidence 2 3 'Structure model' software 3 4 'Structure model' software 4 4 'Structure model' struct_conn 5 5 'Structure model' database_2 6 5 'Structure model' struct_ref_seq_dif 7 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 32.0832 7.6596 14.7783 0.0441 0.0824 0.0404 -0.0116 0.0027 -0.0521 0.6454 0.2618 1.0076 0.0363 0.3905 -0.2672 -0.0055 0.0413 -0.0358 -0.0402 0.0278 -0.0430 0.0123 -0.0766 0.1048 'X-RAY DIFFRACTION' 2 ? refined 48.2855 15.9082 37.0162 0.0085 0.0376 0.0290 0.0043 -0.0138 -0.0117 0.6816 0.4773 1.6501 0.3125 0.3135 0.5569 -0.0246 -0.0255 0.0501 0.0452 -0.0193 0.0826 -0.0603 -0.0561 -0.1258 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 44 A 150 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 B 44 B 150 ? . . . . ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.5.0053 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SOLVE . ? program 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 5 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? 7 # _pdbx_entry_details.entry_id 3LHN _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. THE CLONED CONSTRUCT CONTAINS RESIDUES 26-150 OF THE FULL LENGTH PROTEIN. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 65 ? ? -146.07 44.68 2 1 ASP A 91 ? ? -105.92 68.62 3 1 SER B 65 ? ? -142.88 45.51 4 1 GLU B 92 ? A 30.14 127.02 5 1 GLU B 92 ? B -1.70 150.56 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LEU 43 ? CG ? A LEU 19 CG 2 1 Y 1 A LEU 43 ? CD1 ? A LEU 19 CD1 3 1 Y 1 A LEU 43 ? CD2 ? A LEU 19 CD2 4 1 Y 1 A LYS 90 ? CE ? A LYS 66 CE 5 1 Y 1 A LYS 90 ? NZ ? A LYS 66 NZ 6 1 Y 1 A LYS 100 ? CD ? A LYS 76 CD 7 1 Y 1 A LYS 100 ? CE ? A LYS 76 CE 8 1 Y 1 A LYS 100 ? NZ ? A LYS 76 NZ 9 1 Y 1 A ARG 134 ? CD ? A ARG 110 CD 10 1 Y 1 A ARG 134 ? NE ? A ARG 110 NE 11 1 Y 1 A ARG 134 ? CZ ? A ARG 110 CZ 12 1 Y 1 A ARG 134 ? NH1 ? A ARG 110 NH1 13 1 Y 1 A ARG 134 ? NH2 ? A ARG 110 NH2 14 1 Y 1 A GLU 141 ? CD ? A GLU 117 CD 15 1 Y 1 A GLU 141 ? OE1 ? A GLU 117 OE1 16 1 Y 1 A GLU 141 ? OE2 ? A GLU 117 OE2 17 1 Y 1 A LYS 146 ? CE ? A LYS 122 CE 18 1 Y 1 A LYS 146 ? NZ ? A LYS 122 NZ 19 1 Y 1 B LYS 96 ? CE ? B LYS 72 CE 20 1 Y 1 B LYS 96 ? NZ ? B LYS 72 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A ALA 26 ? A ALA 2 3 1 Y 1 A PRO 27 ? A PRO 3 4 1 Y 1 A SER 28 ? A SER 4 5 1 Y 1 A GLN 29 ? A GLN 5 6 1 Y 1 A GLY 30 ? A GLY 6 7 1 Y 1 A ALA 31 ? A ALA 7 8 1 Y 1 A THR 32 ? A THR 8 9 1 Y 1 A ALA 33 ? A ALA 9 10 1 Y 1 A ASN 34 ? A ASN 10 11 1 Y 1 A ALA 35 ? A ALA 11 12 1 Y 1 A GLU 36 ? A GLU 12 13 1 Y 1 A THR 37 ? A THR 13 14 1 Y 1 A GLN 38 ? A GLN 14 15 1 Y 1 A THR 39 ? A THR 15 16 1 Y 1 A THR 40 ? A THR 16 17 1 Y 1 A ILE 41 ? A ILE 17 18 1 Y 1 A PRO 42 ? A PRO 18 19 1 Y 1 B GLY 0 ? B GLY 1 20 1 Y 1 B ALA 26 ? B ALA 2 21 1 Y 1 B PRO 27 ? B PRO 3 22 1 Y 1 B SER 28 ? B SER 4 23 1 Y 1 B GLN 29 ? B GLN 5 24 1 Y 1 B GLY 30 ? B GLY 6 25 1 Y 1 B ALA 31 ? B ALA 7 26 1 Y 1 B THR 32 ? B THR 8 27 1 Y 1 B ALA 33 ? B ALA 9 28 1 Y 1 B ASN 34 ? B ASN 10 29 1 Y 1 B ALA 35 ? B ALA 11 30 1 Y 1 B GLU 36 ? B GLU 12 31 1 Y 1 B THR 37 ? B THR 13 32 1 Y 1 B GLN 38 ? B GLN 14 33 1 Y 1 B THR 39 ? B THR 15 34 1 Y 1 B THR 40 ? B THR 16 35 1 Y 1 B ILE 41 ? B ILE 17 36 1 Y 1 B PRO 42 ? B PRO 18 37 1 Y 1 B LEU 43 ? B LEU 19 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 GLYCEROL GOL 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 2 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #