HEADER TRANSPORT PROTEIN 23-JAN-10 3LI2 TITLE CLOSED CONFORMATION OF HTSA COMPLEXED WITH STAPHYLOFERRIN A COMPND MOL_ID: 1; COMPND 2 MOLECULE: FERRICHROME ABC TRANSPORTER LIPOPROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 38-327; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS SUBSP. AUREUS; SOURCE 3 ORGANISM_TAXID: 426430; SOURCE 4 STRAIN: NEWMAN; SOURCE 5 GENE: HTSA, NWMN_2078; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS SIDEROPHORE, IRON, RECEPTOR, LIPOPROTEIN, BINDING PROTEIN, TRANSPORT KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.C.GRIGG,M.E.P.MURPHY REVDAT 4 21-FEB-24 3LI2 1 REMARK SEQADV LINK REVDAT 3 13-JUL-11 3LI2 1 VERSN REVDAT 2 26-MAY-10 3LI2 1 JRNL REVDAT 1 09-FEB-10 3LI2 0 JRNL AUTH J.C.GRIGG,J.D.COOPER,J.CHEUNG,D.E.HEINRICHS,M.E.MURPHY JRNL TITL THE STAPHYLOCOCCUS AUREUS SIDEROPHORE RECEPTOR HTSA JRNL TITL 2 UNDERGOES LOCALIZED CONFORMATIONAL CHANGES TO ENCLOSE JRNL TITL 3 STAPHYLOFERRIN A IN AN ARGININE-RICH BINDING POCKET. JRNL REF J.BIOL.CHEM. V. 285 11162 2010 JRNL REFN ISSN 0021-9258 JRNL PMID 20147287 JRNL DOI 10.1074/JBC.M109.097865 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REFMAC_5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.15 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 35626 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1776 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2446 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.58 REMARK 3 BIN R VALUE (WORKING SET) : 0.1400 REMARK 3 BIN FREE R VALUE SET COUNT : 134 REMARK 3 BIN FREE R VALUE : 0.2330 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4569 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 76 REMARK 3 SOLVENT ATOMS : 220 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.12 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 8.23000 REMARK 3 B22 (A**2) : -6.61000 REMARK 3 B33 (A**2) : -1.62000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -10.46000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.046 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.039 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.136 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.226 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4791 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6447 ; 1.478 ; 2.001 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 593 ; 6.756 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 203 ;42.026 ;25.369 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 969 ;20.057 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 25 ;18.800 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 721 ; 0.098 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3499 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2932 ; 0.473 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4737 ; 0.806 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1859 ; 1.449 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1710 ; 2.229 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 2 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.509 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : L, -K, H REMARK 3 TWIN FRACTION : 0.491 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 20 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 36 A 68 REMARK 3 ORIGIN FOR THE GROUP (A): -6.5127 -27.9472 2.9764 REMARK 3 T TENSOR REMARK 3 T11: 0.2648 T22: 0.0340 REMARK 3 T33: 0.2020 T12: -0.0192 REMARK 3 T13: -0.0215 T23: -0.0036 REMARK 3 L TENSOR REMARK 3 L11: 3.2938 L22: 4.3694 REMARK 3 L33: 2.4598 L12: 2.0349 REMARK 3 L13: 0.2808 L23: 0.1231 REMARK 3 S TENSOR REMARK 3 S11: 0.1696 S12: -0.1521 S13: -0.5674 REMARK 3 S21: 0.4927 S22: -0.1244 S23: -0.0281 REMARK 3 S31: 0.5687 S32: -0.0705 S33: -0.0452 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 69 A 98 REMARK 3 ORIGIN FOR THE GROUP (A): -6.1763 -15.5809 -8.5330 REMARK 3 T TENSOR REMARK 3 T11: 0.3702 T22: 0.2926 REMARK 3 T33: 0.2115 T12: -0.1548 REMARK 3 T13: -0.1125 T23: -0.0045 REMARK 3 L TENSOR REMARK 3 L11: 4.9565 L22: 5.5127 REMARK 3 L33: 2.5867 L12: -0.6605 REMARK 3 L13: -2.8420 L23: -1.3991 REMARK 3 S TENSOR REMARK 3 S11: -0.0146 S12: 0.8597 S13: 0.4358 REMARK 3 S21: -1.0353 S22: 0.2909 S23: 0.0720 REMARK 3 S31: 0.0719 S32: -0.3925 S33: -0.2763 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 99 A 173 REMARK 3 ORIGIN FOR THE GROUP (A): -6.0512 -21.9703 4.0002 REMARK 3 T TENSOR REMARK 3 T11: 0.1756 T22: 0.0005 REMARK 3 T33: 0.0838 T12: -0.0281 REMARK 3 T13: -0.0052 T23: -0.0182 REMARK 3 L TENSOR REMARK 3 L11: 3.2817 L22: 4.7318 REMARK 3 L33: 2.3793 L12: 1.6967 REMARK 3 L13: 0.5639 L23: 0.2937 REMARK 3 S TENSOR REMARK 3 S11: 0.1034 S12: 0.0200 S13: -0.1919 REMARK 3 S21: 0.3599 S22: -0.0783 S23: 0.2082 REMARK 3 S31: 0.2047 S32: -0.0348 S33: -0.0252 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 174 A 191 REMARK 3 ORIGIN FOR THE GROUP (A): 18.4138 -15.8547 -6.7205 REMARK 3 T TENSOR REMARK 3 T11: 0.2712 T22: 0.5936 REMARK 3 T33: 0.5501 T12: -0.0708 REMARK 3 T13: 0.1073 T23: -0.2640 REMARK 3 L TENSOR REMARK 3 L11: 1.0485 L22: 11.4260 REMARK 3 L33: 1.9343 L12: 0.6949 REMARK 3 L13: -1.1446 L23: 1.6881 REMARK 3 S TENSOR REMARK 3 S11: -0.2131 S12: 0.4195 S13: -0.5338 REMARK 3 S21: -0.4447 S22: 0.1203 S23: -1.0655 REMARK 3 S31: 0.0259 S32: 0.0667 S33: 0.0929 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 192 A 219 REMARK 3 ORIGIN FOR THE GROUP (A): 11.3036 -4.6444 6.3161 REMARK 3 T TENSOR REMARK 3 T11: 0.1557 T22: 0.1103 REMARK 3 T33: 0.1253 T12: -0.0861 REMARK 3 T13: -0.0755 T23: 0.0386 REMARK 3 L TENSOR REMARK 3 L11: 3.5151 L22: 5.0850 REMARK 3 L33: 3.8120 L12: 2.0466 REMARK 3 L13: 0.0570 L23: 1.4073 REMARK 3 S TENSOR REMARK 3 S11: 0.0114 S12: 0.0028 S13: -0.1630 REMARK 3 S21: 0.1356 S22: 0.0491 S23: -0.3770 REMARK 3 S31: -0.3498 S32: 0.2315 S33: -0.0605 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 220 A 239 REMARK 3 ORIGIN FOR THE GROUP (A): 12.7114 -6.5383 12.2453 REMARK 3 T TENSOR REMARK 3 T11: 0.3697 T22: 0.1587 REMARK 3 T33: 0.3095 T12: -0.1256 REMARK 3 T13: -0.1271 T23: 0.0442 REMARK 3 L TENSOR REMARK 3 L11: 4.2382 L22: 4.6661 REMARK 3 L33: 5.4798 L12: -1.3167 REMARK 3 L13: -2.7710 L23: 4.6244 REMARK 3 S TENSOR REMARK 3 S11: -0.1749 S12: -0.2995 S13: -0.3169 REMARK 3 S21: 1.0353 S22: 0.1522 S23: -0.3156 REMARK 3 S31: 0.7391 S32: 0.4663 S33: 0.0227 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 240 A 267 REMARK 3 ORIGIN FOR THE GROUP (A): 9.1792 1.3524 8.5916 REMARK 3 T TENSOR REMARK 3 T11: 0.1861 T22: 0.0544 REMARK 3 T33: 0.2135 T12: -0.0180 REMARK 3 T13: -0.0795 T23: 0.0257 REMARK 3 L TENSOR REMARK 3 L11: 1.1734 L22: 2.5672 REMARK 3 L33: 4.3152 L12: 1.7999 REMARK 3 L13: 0.7437 L23: 1.3023 REMARK 3 S TENSOR REMARK 3 S11: 0.1183 S12: -0.0506 S13: 0.1081 REMARK 3 S21: 0.2238 S22: -0.0849 S23: -0.0767 REMARK 3 S31: -0.1439 S32: 0.1545 S33: -0.0334 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 268 A 283 REMARK 3 ORIGIN FOR THE GROUP (A): 6.6315 11.5889 1.4784 REMARK 3 T TENSOR REMARK 3 T11: 0.5064 T22: 0.1667 REMARK 3 T33: 0.7409 T12: -0.0208 REMARK 3 T13: 0.0418 T23: 0.2092 REMARK 3 L TENSOR REMARK 3 L11: 15.6378 L22: 1.1335 REMARK 3 L33: 10.7606 L12: 5.0440 REMARK 3 L13: 12.4306 L23: 3.2406 REMARK 3 S TENSOR REMARK 3 S11: -0.0601 S12: 0.0855 S13: 1.4147 REMARK 3 S21: 0.1252 S22: -0.0056 S23: 0.5657 REMARK 3 S31: -0.6061 S32: -0.2037 S33: 0.0657 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 284 A 310 REMARK 3 ORIGIN FOR THE GROUP (A): 10.7924 -0.7553 -0.5520 REMARK 3 T TENSOR REMARK 3 T11: 0.2065 T22: 0.2232 REMARK 3 T33: 0.0919 T12: -0.1386 REMARK 3 T13: 0.0300 T23: -0.0182 REMARK 3 L TENSOR REMARK 3 L11: 2.2395 L22: 5.8171 REMARK 3 L33: 1.3682 L12: 2.0105 REMARK 3 L13: -0.4381 L23: -0.6167 REMARK 3 S TENSOR REMARK 3 S11: -0.1377 S12: 0.4659 S13: -0.0108 REMARK 3 S21: -0.2273 S22: 0.2280 S23: -0.2302 REMARK 3 S31: -0.3778 S32: 0.3780 S33: -0.0902 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 311 A 323 REMARK 3 ORIGIN FOR THE GROUP (A): 14.2575 -8.0052 -8.7851 REMARK 3 T TENSOR REMARK 3 T11: 0.5451 T22: 0.7224 REMARK 3 T33: 0.1686 T12: -0.5359 REMARK 3 T13: 0.1155 T23: -0.1552 REMARK 3 L TENSOR REMARK 3 L11: 6.7309 L22: 22.2332 REMARK 3 L33: 2.0849 L12: 5.2200 REMARK 3 L13: -5.4058 L23: -3.8585 REMARK 3 S TENSOR REMARK 3 S11: -0.4678 S12: 1.0565 S13: -0.1064 REMARK 3 S21: -0.8075 S22: 0.5149 S23: -0.0448 REMARK 3 S31: 0.0568 S32: -0.4143 S33: -0.0471 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 36 B 61 REMARK 3 ORIGIN FOR THE GROUP (A): 6.8308 -29.0924 28.1938 REMARK 3 T TENSOR REMARK 3 T11: 0.3767 T22: 0.0924 REMARK 3 T33: 0.2138 T12: 0.0531 REMARK 3 T13: -0.0645 T23: -0.0133 REMARK 3 L TENSOR REMARK 3 L11: 4.0851 L22: 6.7179 REMARK 3 L33: 2.2704 L12: 0.0728 REMARK 3 L13: 2.1571 L23: 0.4933 REMARK 3 S TENSOR REMARK 3 S11: -0.2461 S12: 0.0793 S13: 0.5938 REMARK 3 S21: -0.1929 S22: -0.0935 S23: 0.6276 REMARK 3 S31: -0.6763 S32: -0.1545 S33: 0.3397 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 62 B 101 REMARK 3 ORIGIN FOR THE GROUP (A): 17.3993 -43.7350 32.0274 REMARK 3 T TENSOR REMARK 3 T11: 0.2804 T22: 0.1674 REMARK 3 T33: 0.2547 T12: 0.0171 REMARK 3 T13: -0.1327 T23: 0.0714 REMARK 3 L TENSOR REMARK 3 L11: 1.4131 L22: 4.3514 REMARK 3 L33: 4.2958 L12: -0.9016 REMARK 3 L13: -1.6004 L23: 1.5537 REMARK 3 S TENSOR REMARK 3 S11: -0.0164 S12: -0.3944 S13: -0.3023 REMARK 3 S21: 0.7100 S22: 0.0495 S23: -0.6475 REMARK 3 S31: 0.2951 S32: 0.7372 S33: -0.0331 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 102 B 122 REMARK 3 ORIGIN FOR THE GROUP (A): 4.3353 -41.4928 35.7714 REMARK 3 T TENSOR REMARK 3 T11: 0.6119 T22: 0.1674 REMARK 3 T33: 0.2246 T12: -0.0078 REMARK 3 T13: 0.2139 T23: 0.0179 REMARK 3 L TENSOR REMARK 3 L11: 6.0893 L22: 1.3912 REMARK 3 L33: 3.3919 L12: -1.5286 REMARK 3 L13: -2.0657 L23: 2.4661 REMARK 3 S TENSOR REMARK 3 S11: -0.3643 S12: -1.0664 S13: -0.2740 REMARK 3 S21: 0.6735 S22: 0.0984 S23: 0.2886 REMARK 3 S31: 0.7051 S32: 0.0693 S33: 0.2659 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 123 B 161 REMARK 3 ORIGIN FOR THE GROUP (A): 4.9696 -38.7679 23.1326 REMARK 3 T TENSOR REMARK 3 T11: 0.2063 T22: 0.0851 REMARK 3 T33: 0.4175 T12: 0.0343 REMARK 3 T13: -0.0633 T23: 0.0780 REMARK 3 L TENSOR REMARK 3 L11: 0.3533 L22: 5.8134 REMARK 3 L33: 5.5734 L12: -1.7640 REMARK 3 L13: -0.1591 L23: 1.8108 REMARK 3 S TENSOR REMARK 3 S11: -0.0463 S12: 0.1876 S13: -0.0074 REMARK 3 S21: -0.0961 S22: -0.2798 S23: 0.7775 REMARK 3 S31: -0.4423 S32: -0.5757 S33: 0.3261 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 162 B 196 REMARK 3 ORIGIN FOR THE GROUP (A): 24.6801 -40.8815 12.4886 REMARK 3 T TENSOR REMARK 3 T11: 0.3863 T22: 0.2390 REMARK 3 T33: 0.3927 T12: -0.0715 REMARK 3 T13: 0.1687 T23: -0.0044 REMARK 3 L TENSOR REMARK 3 L11: 2.3613 L22: 3.0430 REMARK 3 L33: 2.8500 L12: -0.7950 REMARK 3 L13: 0.0353 L23: 2.2131 REMARK 3 S TENSOR REMARK 3 S11: 0.2132 S12: 0.2338 S13: 0.4077 REMARK 3 S21: -0.7537 S22: 0.1444 S23: -0.9513 REMARK 3 S31: -0.5535 S32: 0.4418 S33: -0.3577 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 197 B 219 REMARK 3 ORIGIN FOR THE GROUP (A): 11.6560 -55.1632 12.8174 REMARK 3 T TENSOR REMARK 3 T11: 0.2143 T22: 0.0920 REMARK 3 T33: 0.0653 T12: 0.0128 REMARK 3 T13: -0.0291 T23: 0.0155 REMARK 3 L TENSOR REMARK 3 L11: 4.7390 L22: 6.2191 REMARK 3 L33: 4.0859 L12: -0.9229 REMARK 3 L13: 0.5395 L23: 1.8670 REMARK 3 S TENSOR REMARK 3 S11: 0.0143 S12: 0.0094 S13: -0.2828 REMARK 3 S21: -0.3446 S22: 0.0899 S23: 0.4555 REMARK 3 S31: 0.0374 S32: -0.3026 S33: -0.1042 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 220 B 240 REMARK 3 ORIGIN FOR THE GROUP (A): 8.1478 -53.9571 7.8584 REMARK 3 T TENSOR REMARK 3 T11: 0.3762 T22: 0.1284 REMARK 3 T33: 0.4052 T12: 0.0848 REMARK 3 T13: -0.1781 T23: 0.0161 REMARK 3 L TENSOR REMARK 3 L11: 8.5283 L22: 1.0286 REMARK 3 L33: 6.4076 L12: -0.9622 REMARK 3 L13: 4.4511 L23: 2.0770 REMARK 3 S TENSOR REMARK 3 S11: 0.3495 S12: 1.0580 S13: 0.3230 REMARK 3 S21: -0.4297 S22: -0.4030 S23: 0.2254 REMARK 3 S31: -0.2033 S32: -0.0536 S33: 0.0535 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 241 B 266 REMARK 3 ORIGIN FOR THE GROUP (A): 10.7992 -61.7373 10.5322 REMARK 3 T TENSOR REMARK 3 T11: 0.2367 T22: 0.0730 REMARK 3 T33: 0.1758 T12: 0.0455 REMARK 3 T13: 0.0337 T23: -0.0301 REMARK 3 L TENSOR REMARK 3 L11: 1.7491 L22: 6.2192 REMARK 3 L33: 1.9247 L12: -0.7819 REMARK 3 L13: 2.0070 L23: 0.3781 REMARK 3 S TENSOR REMARK 3 S11: -0.1304 S12: -0.0059 S13: -0.2766 REMARK 3 S21: -0.2867 S22: 0.1957 S23: 0.3685 REMARK 3 S31: -0.0455 S32: 0.0805 S33: -0.0653 REMARK 3 REMARK 3 TLS GROUP : 19 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 267 B 305 REMARK 3 ORIGIN FOR THE GROUP (A): 17.8607 -66.4918 14.3259 REMARK 3 T TENSOR REMARK 3 T11: 0.2777 T22: 0.1411 REMARK 3 T33: 0.1877 T12: 0.0274 REMARK 3 T13: -0.0899 T23: -0.0516 REMARK 3 L TENSOR REMARK 3 L11: 1.3679 L22: 6.6823 REMARK 3 L33: 2.6824 L12: -0.9256 REMARK 3 L13: 0.3349 L23: 1.8510 REMARK 3 S TENSOR REMARK 3 S11: 0.2078 S12: 0.1281 S13: -0.3897 REMARK 3 S21: 0.5658 S22: 0.1180 S23: -0.1488 REMARK 3 S31: 0.7421 S32: 0.1914 S33: -0.3258 REMARK 3 REMARK 3 TLS GROUP : 20 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 306 B 327 REMARK 3 ORIGIN FOR THE GROUP (A): 28.0667 -52.9199 14.6814 REMARK 3 T TENSOR REMARK 3 T11: 0.2188 T22: 0.2662 REMARK 3 T33: 0.3952 T12: -0.0229 REMARK 3 T13: 0.1176 T23: -0.1546 REMARK 3 L TENSOR REMARK 3 L11: 2.9786 L22: 1.3612 REMARK 3 L33: 7.6716 L12: -0.7597 REMARK 3 L13: -0.8955 L23: 1.2988 REMARK 3 S TENSOR REMARK 3 S11: -0.0286 S12: -0.2302 S13: -0.0570 REMARK 3 S21: -0.2332 S22: 0.4369 S23: -0.6743 REMARK 3 S31: 0.5032 S32: 1.2476 S33: -0.4083 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 THE FRIEDEL PAIRS WERE USED FOR PHASING. REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES: WITH REMARK 3 TLS ADDED REMARK 4 REMARK 4 3LI2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-FEB-10. REMARK 100 THE DEPOSITION ID IS D_1000057303. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-NOV-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : DCM WITH CRYO-COOLED 1ST CRYSTAL REMARK 200 SAGITTALLY BENT 2ND CRYSTAL REMARK 200 FOLLOWED BY VERTICALLY FOCUSING REMARK 200 MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.9 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35659 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 74.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08500 REMARK 200 FOR THE DATA SET : 10.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.30900 REMARK 200 FOR SHELL : 4.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: THE STRUCTURE FACTOR FILE CONTAINS FRIEDEL PAIRS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.05 M ZINC ACETATE, 20 % PEG 3350, PH REMARK 280 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 74.30000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 32 REMARK 465 SER A 33 REMARK 465 HIS A 34 REMARK 465 MET A 35 REMARK 465 LYS A 324 REMARK 465 GLU A 325 REMARK 465 GLN A 326 REMARK 465 LYS A 327 REMARK 465 GLY B 32 REMARK 465 SER B 33 REMARK 465 HIS B 34 REMARK 465 MET B 35 REMARK 465 GLU B 325 REMARK 465 GLN B 326 REMARK 465 LYS B 327 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O VAL B 200 O LEU B 206 2.02 REMARK 500 OD2 ASP A 248 N HIS A 251 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 116 65.31 35.28 REMARK 500 SER A 145 -73.60 -144.45 REMARK 500 ASP A 149 -159.95 -81.83 REMARK 500 LYS A 203 81.50 97.25 REMARK 500 ASP A 230 48.51 -64.23 REMARK 500 ASP A 231 -36.36 -168.68 REMARK 500 LYS A 234 -69.90 -24.95 REMARK 500 LEU A 236 119.22 56.75 REMARK 500 LYS A 269 36.87 39.30 REMARK 500 ASP A 270 -79.71 -88.38 REMARK 500 SER A 271 119.47 61.18 REMARK 500 ASP B 43 -166.91 -115.95 REMARK 500 ASP B 53 76.65 -116.62 REMARK 500 ALA B 79 98.75 -67.58 REMARK 500 ASP B 81 19.75 59.33 REMARK 500 SER B 145 -76.14 -155.84 REMARK 500 ASP B 191 105.82 -44.79 REMARK 500 LEU B 207 83.27 52.66 REMARK 500 ALA B 267 -44.54 -22.34 REMARK 500 LYS B 268 114.80 175.92 REMARK 500 LYS B 269 81.90 -164.16 REMARK 500 ASP B 270 29.00 -146.58 REMARK 500 LYS B 290 -39.62 -32.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 VAL A 201 ALA A 202 -147.51 REMARK 500 LYS B 269 ASP B 270 -147.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 1 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 266 NE2 REMARK 620 2 HOH A 404 O 116.7 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 2 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 266 ND1 REMARK 620 2 ASP A 270 OD1 111.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 3 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 248 OD1 REMARK 620 2 ASP A 248 OD2 59.1 REMARK 620 3 HIS A 251 ND1 129.4 112.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 4 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 254 OD2 REMARK 620 2 ASP A 254 OD1 57.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 500 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SF8 A 501 O29 REMARK 620 2 SF8 A 501 O22 150.5 REMARK 620 3 SF8 A 501 O32 90.0 95.8 REMARK 620 4 SF8 A 501 O30 74.4 77.2 85.9 REMARK 620 5 SF8 A 501 O19 107.3 71.0 162.3 102.0 REMARK 620 6 SF8 A 501 O18 116.7 91.8 94.5 168.9 74.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE B 500 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SF8 B 501 O22 REMARK 620 2 SF8 B 501 O30 77.8 REMARK 620 3 SF8 B 501 O29 154.8 78.0 REMARK 620 4 SF8 B 501 O19 76.9 96.6 112.5 REMARK 620 5 SF8 B 501 O18 90.9 166.0 112.1 88.5 REMARK 620 6 SF8 B 501 O32 96.9 90.1 76.6 169.6 83.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SF8 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 14 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE B 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SF8 B 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3EIW RELATED DB: PDB REMARK 900 APO-HTSA REMARK 900 RELATED ID: 3EIX RELATED DB: PDB REMARK 900 SELENOMETHIONINE APO-HTSA REMARK 900 RELATED ID: 3LHS RELATED DB: PDB DBREF 3LI2 A 39 327 UNP A6QJ18 A6QJ18_STAAE 38 326 DBREF 3LI2 B 39 327 UNP A6QJ18 A6QJ18_STAAE 38 326 SEQADV 3LI2 GLY A 32 UNP A6QJ18 EXPRESSION TAG SEQADV 3LI2 SER A 33 UNP A6QJ18 EXPRESSION TAG SEQADV 3LI2 HIS A 34 UNP A6QJ18 EXPRESSION TAG SEQADV 3LI2 MET A 35 UNP A6QJ18 EXPRESSION TAG SEQADV 3LI2 ALA A 36 UNP A6QJ18 EXPRESSION TAG SEQADV 3LI2 SER A 37 UNP A6QJ18 EXPRESSION TAG SEQADV 3LI2 THR A 38 UNP A6QJ18 EXPRESSION TAG SEQADV 3LI2 GLY B 32 UNP A6QJ18 EXPRESSION TAG SEQADV 3LI2 SER B 33 UNP A6QJ18 EXPRESSION TAG SEQADV 3LI2 HIS B 34 UNP A6QJ18 EXPRESSION TAG SEQADV 3LI2 MET B 35 UNP A6QJ18 EXPRESSION TAG SEQADV 3LI2 ALA B 36 UNP A6QJ18 EXPRESSION TAG SEQADV 3LI2 SER B 37 UNP A6QJ18 EXPRESSION TAG SEQADV 3LI2 THR B 38 UNP A6QJ18 EXPRESSION TAG SEQRES 1 A 296 GLY SER HIS MET ALA SER THR ILE SER VAL LYS ASP GLU SEQRES 2 A 296 ASN GLY THR VAL LYS VAL PRO LYS ASP ALA LYS ARG ILE SEQRES 3 A 296 VAL VAL LEU GLU TYR SER PHE ALA ASP ALA LEU ALA ALA SEQRES 4 A 296 LEU ASP VAL LYS PRO VAL GLY ILE ALA ASP ASP GLY LYS SEQRES 5 A 296 LYS LYS ARG ILE ILE LYS PRO VAL ARG GLU LYS ILE GLY SEQRES 6 A 296 ASP TYR THR SER VAL GLY THR ARG LYS GLN PRO ASN LEU SEQRES 7 A 296 GLU GLU ILE SER LYS LEU LYS PRO ASP LEU ILE ILE ALA SEQRES 8 A 296 ASP SER SER ARG HIS LYS GLY ILE ASN LYS GLU LEU ASN SEQRES 9 A 296 LYS ILE ALA PRO THR LEU SER LEU LYS SER PHE ASP GLY SEQRES 10 A 296 ASP TYR LYS GLN ASN ILE ASN SER PHE LYS THR ILE ALA SEQRES 11 A 296 LYS ALA LEU ASN LYS GLU LYS GLU GLY GLU LYS ARG LEU SEQRES 12 A 296 ALA GLU HIS ASP LYS LEU ILE ASN LYS TYR LYS ASP GLU SEQRES 13 A 296 ILE LYS PHE ASP ARG ASN GLN LYS VAL LEU PRO ALA VAL SEQRES 14 A 296 VAL ALA LYS ALA GLY LEU LEU ALA HIS PRO ASN TYR SER SEQRES 15 A 296 TYR VAL GLY GLN PHE LEU ASN GLU LEU GLY PHE LYS ASN SEQRES 16 A 296 ALA LEU SER ASP ASP VAL THR LYS GLY LEU SER LYS TYR SEQRES 17 A 296 LEU LYS GLY PRO TYR LEU GLN LEU ASP THR GLU HIS LEU SEQRES 18 A 296 ALA ASP LEU ASN PRO GLU ARG MET ILE ILE MET THR ASP SEQRES 19 A 296 HIS ALA LYS LYS ASP SER ALA GLU PHE LYS LYS LEU GLN SEQRES 20 A 296 GLU ASP ALA THR TRP LYS LYS LEU ASN ALA VAL LYS ASN SEQRES 21 A 296 ASN ARG VAL ASP ILE VAL ASP ARG ASP VAL TRP ALA ARG SEQRES 22 A 296 SER ARG GLY LEU ILE SER SER GLU GLU MET ALA LYS GLU SEQRES 23 A 296 LEU VAL GLU LEU SER LYS LYS GLU GLN LYS SEQRES 1 B 296 GLY SER HIS MET ALA SER THR ILE SER VAL LYS ASP GLU SEQRES 2 B 296 ASN GLY THR VAL LYS VAL PRO LYS ASP ALA LYS ARG ILE SEQRES 3 B 296 VAL VAL LEU GLU TYR SER PHE ALA ASP ALA LEU ALA ALA SEQRES 4 B 296 LEU ASP VAL LYS PRO VAL GLY ILE ALA ASP ASP GLY LYS SEQRES 5 B 296 LYS LYS ARG ILE ILE LYS PRO VAL ARG GLU LYS ILE GLY SEQRES 6 B 296 ASP TYR THR SER VAL GLY THR ARG LYS GLN PRO ASN LEU SEQRES 7 B 296 GLU GLU ILE SER LYS LEU LYS PRO ASP LEU ILE ILE ALA SEQRES 8 B 296 ASP SER SER ARG HIS LYS GLY ILE ASN LYS GLU LEU ASN SEQRES 9 B 296 LYS ILE ALA PRO THR LEU SER LEU LYS SER PHE ASP GLY SEQRES 10 B 296 ASP TYR LYS GLN ASN ILE ASN SER PHE LYS THR ILE ALA SEQRES 11 B 296 LYS ALA LEU ASN LYS GLU LYS GLU GLY GLU LYS ARG LEU SEQRES 12 B 296 ALA GLU HIS ASP LYS LEU ILE ASN LYS TYR LYS ASP GLU SEQRES 13 B 296 ILE LYS PHE ASP ARG ASN GLN LYS VAL LEU PRO ALA VAL SEQRES 14 B 296 VAL ALA LYS ALA GLY LEU LEU ALA HIS PRO ASN TYR SER SEQRES 15 B 296 TYR VAL GLY GLN PHE LEU ASN GLU LEU GLY PHE LYS ASN SEQRES 16 B 296 ALA LEU SER ASP ASP VAL THR LYS GLY LEU SER LYS TYR SEQRES 17 B 296 LEU LYS GLY PRO TYR LEU GLN LEU ASP THR GLU HIS LEU SEQRES 18 B 296 ALA ASP LEU ASN PRO GLU ARG MET ILE ILE MET THR ASP SEQRES 19 B 296 HIS ALA LYS LYS ASP SER ALA GLU PHE LYS LYS LEU GLN SEQRES 20 B 296 GLU ASP ALA THR TRP LYS LYS LEU ASN ALA VAL LYS ASN SEQRES 21 B 296 ASN ARG VAL ASP ILE VAL ASP ARG ASP VAL TRP ALA ARG SEQRES 22 B 296 SER ARG GLY LEU ILE SER SER GLU GLU MET ALA LYS GLU SEQRES 23 B 296 LEU VAL GLU LEU SER LYS LYS GLU GLN LYS HET FE A 500 1 HET SF8 A 501 33 HET ZN A 1 1 HET ZN A 2 1 HET ZN A 3 1 HET ZN A 4 1 HET ACT A 14 4 HET FE B 500 1 HET SF8 B 501 33 HETNAM FE FE (III) ION HETNAM SF8 (2R)-2-(2-{[(1R)-1-CARBOXY-4-{[(3S)-3,4-DICARBOXY-3- HETNAM 2 SF8 HYDROXYBUTANOYL]AMINO}BUTYL]AMINO}-2-OXOETHYL)-2- HETNAM 3 SF8 HYDROXYBUTANEDIOIC ACID HETNAM ZN ZINC ION HETNAM ACT ACETATE ION HETSYN SF8 STAPHYLOFERRIN A FORMUL 3 FE 2(FE 3+) FORMUL 4 SF8 2(C17 H24 N2 O14) FORMUL 5 ZN 4(ZN 2+) FORMUL 9 ACT C2 H3 O2 1- FORMUL 12 HOH *220(H2 O) HELIX 1 1 GLU A 61 ALA A 70 1 10 HELIX 2 2 LYS A 83 ILE A 87 5 5 HELIX 3 3 ILE A 88 GLY A 96 1 9 HELIX 4 4 ASN A 108 LEU A 115 1 8 HELIX 5 5 HIS A 127 GLY A 129 5 3 HELIX 6 6 ILE A 130 ALA A 138 1 9 HELIX 7 7 ASP A 149 LEU A 164 1 16 HELIX 8 8 LYS A 166 ASP A 186 1 21 HELIX 9 9 SER A 213 LEU A 222 1 10 HELIX 10 10 ASP A 248 ASN A 256 1 9 HELIX 11 11 SER A 271 ASP A 280 1 10 HELIX 12 12 ASP A 280 LYS A 285 1 6 HELIX 13 13 LEU A 286 ASN A 291 1 6 HELIX 14 14 ARG A 299 ALA A 303 1 5 HELIX 15 15 GLY A 307 LYS A 323 1 17 HELIX 16 16 GLU B 61 LEU B 71 1 11 HELIX 17 17 LYS B 83 ILE B 87 5 5 HELIX 18 18 ILE B 88 GLY B 96 1 9 HELIX 19 19 ASN B 108 LEU B 115 1 8 HELIX 20 20 ILE B 130 ASN B 135 1 6 HELIX 21 21 ASP B 149 LEU B 164 1 16 HELIX 22 22 LYS B 166 ILE B 188 1 23 HELIX 23 23 SER B 213 LEU B 222 1 10 HELIX 24 24 SER B 229 LYS B 234 1 6 HELIX 25 25 LYS B 238 GLY B 242 5 5 HELIX 26 26 ASP B 248 ASN B 256 1 9 HELIX 27 27 SER B 271 GLU B 279 1 9 HELIX 28 28 ASP B 280 LYS B 285 1 6 HELIX 29 29 LEU B 286 ASN B 291 1 6 HELIX 30 30 ARG B 299 ALA B 303 1 5 HELIX 31 31 GLY B 307 LYS B 324 1 18 SHEET 1 A 2 THR A 38 LYS A 42 0 SHEET 2 A 2 THR A 47 PRO A 51 -1 O VAL A 48 N VAL A 41 SHEET 1 B 5 THR A 99 SER A 100 0 SHEET 2 B 5 GLY A 77 ILE A 78 1 N ILE A 78 O THR A 99 SHEET 3 B 5 ILE A 57 VAL A 59 1 N VAL A 59 O GLY A 77 SHEET 4 B 5 LEU A 119 ASP A 123 1 O ILE A 121 N VAL A 58 SHEET 5 B 5 THR A 140 LEU A 143 1 O LEU A 143 N ALA A 122 SHEET 1 C 6 LYS A 238 TYR A 239 0 SHEET 2 C 6 GLY A 242 GLN A 246 -1 O GLY A 242 N TYR A 239 SHEET 3 C 6 LEU A 207 ALA A 208 -1 N ALA A 208 O LEU A 245 SHEET 4 C 6 VAL A 196 VAL A 200 -1 N VAL A 200 O LEU A 207 SHEET 5 C 6 ARG A 259 THR A 264 1 O MET A 263 N ALA A 199 SHEET 6 C 6 VAL A 294 ASP A 298 1 O VAL A 297 N THR A 264 SHEET 1 D 2 THR B 38 LYS B 42 0 SHEET 2 D 2 THR B 47 PRO B 51 -1 O VAL B 50 N ILE B 39 SHEET 1 E 5 THR B 99 SER B 100 0 SHEET 2 E 5 GLY B 77 ILE B 78 1 N ILE B 78 O THR B 99 SHEET 3 E 5 ILE B 57 VAL B 59 1 N VAL B 59 O GLY B 77 SHEET 4 E 5 LEU B 119 ASP B 123 1 O LEU B 119 N VAL B 58 SHEET 5 E 5 THR B 140 LEU B 143 1 O LEU B 141 N ALA B 122 SHEET 1 F 3 VAL B 196 ALA B 199 0 SHEET 2 F 3 ARG B 259 THR B 264 1 O MET B 263 N ALA B 199 SHEET 3 F 3 VAL B 294 ASP B 298 1 O VAL B 297 N ILE B 262 LINK ZN ZN A 1 NE2 HIS A 266 1555 1555 1.79 LINK ZN ZN A 1 O HOH A 404 1555 1555 2.21 LINK ZN ZN A 2 ND1 HIS A 266 1555 1555 2.38 LINK ZN ZN A 2 OD1 ASP A 270 1555 1555 1.73 LINK ZN ZN A 3 OD1 ASP A 248 1555 1555 1.84 LINK ZN ZN A 3 OD2 ASP A 248 1555 1555 2.42 LINK ZN ZN A 3 ND1 HIS A 251 1555 1555 2.08 LINK ZN ZN A 4 OD2 ASP A 254 1555 1555 2.20 LINK ZN ZN A 4 OD1 ASP A 254 1555 1555 2.34 LINK FE FE A 500 O29 SF8 A 501 1555 1555 1.91 LINK FE FE A 500 O22 SF8 A 501 1555 1555 2.05 LINK FE FE A 500 O32 SF8 A 501 1555 1555 2.10 LINK FE FE A 500 O30 SF8 A 501 1555 1555 2.15 LINK FE FE A 500 O19 SF8 A 501 1555 1555 2.17 LINK FE FE A 500 O18 SF8 A 501 1555 1555 2.19 LINK FE FE B 500 O22 SF8 B 501 1555 1555 1.94 LINK FE FE B 500 O30 SF8 B 501 1555 1555 2.06 LINK FE FE B 500 O29 SF8 B 501 1555 1555 2.09 LINK FE FE B 500 O19 SF8 B 501 1555 1555 2.11 LINK FE FE B 500 O18 SF8 B 501 1555 1555 2.14 LINK FE FE B 500 O32 SF8 B 501 1555 1555 2.19 CISPEP 1 LYS A 203 ALA A 204 0 -5.21 CISPEP 2 GLY A 205 LEU A 206 0 -1.98 CISPEP 3 LYS B 268 LYS B 269 0 -23.15 SITE 1 AC1 1 SF8 A 501 SITE 1 AC2 14 ARG A 86 ARG A 104 ARG A 126 VAL A 200 SITE 2 AC2 14 ALA A 202 LYS A 203 HIS A 209 TYR A 239 SITE 3 AC2 14 ARG A 299 ALA A 303 ARG A 304 ARG A 306 SITE 4 AC2 14 HOH A 337 FE A 500 SITE 1 AC3 3 HIS A 266 HOH A 363 HOH A 404 SITE 1 AC4 2 HIS A 266 ASP A 270 SITE 1 AC5 2 ASP A 248 HIS A 251 SITE 1 AC6 1 ASP A 254 SITE 1 AC7 2 SER A 322 LYS A 323 SITE 1 AC8 1 SF8 B 501 SITE 1 AC9 17 HOH B 29 ARG B 86 ARG B 104 ARG B 126 SITE 2 AC9 17 PHE B 146 VAL B 200 ALA B 202 LYS B 203 SITE 3 AC9 17 LEU B 207 HIS B 209 TYR B 239 ARG B 299 SITE 4 AC9 17 ALA B 303 ARG B 304 ARG B 306 HOH B 380 SITE 5 AC9 17 FE B 500 CRYST1 52.280 148.600 52.270 90.00 117.14 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019128 0.000000 0.009805 0.00000 SCALE2 0.000000 0.006729 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021498 0.00000