HEADER HYDROLASE 26-JAN-10 3LJC TITLE CRYSTAL STRUCTURE OF LON N-TERMINAL DOMAIN. COMPND MOL_ID: 1; COMPND 2 MOLECULE: ATP-DEPENDENT PROTEASE LA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: LON N-DOMAIN (UNP RESIDUES 1-245); COMPND 5 EC: 3.4.21.53; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: LON, CAPR, DEG, LOPA, MUC, B0439, JW0429; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: MG1655; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PBAD33 KEYWDS LON N-DOMAIN, ALLOSTERIC ENZYME, ATP-BINDING, DNA-BINDING, HYDROLASE, KEYWDS 2 NUCLEOTIDE-BINDING, PROTEASE, SERINE PROTEASE, STRESS RESPONSE EXPDTA X-RAY DIFFRACTION AUTHOR M.LI,A.GUSTCHINA,Z.DAUTER,A.WLODAWER REVDAT 4 01-NOV-17 3LJC 1 REMARK REVDAT 3 13-JUL-11 3LJC 1 VERSN REVDAT 2 25-AUG-10 3LJC 1 JRNL REVDAT 1 21-JUL-10 3LJC 0 JRNL AUTH M.LI,A.GUSTCHINA,F.S.RASULOVA,E.E.MELNIKOV,M.R.MAURIZI, JRNL AUTH 2 T.V.ROTANOVA,Z.DAUTER,A.WLODAWER JRNL TITL STRUCTURE OF THE N-TERMINAL FRAGMENT OF ESCHERICHIA COLI LON JRNL TITL 2 PROTEASE JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 66 865 2010 JRNL REFN ISSN 0907-4449 JRNL PMID 20693685 JRNL DOI 10.1107/S0907444910019554 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0104 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 11878 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.235 REMARK 3 R VALUE (WORKING SET) : 0.233 REMARK 3 FREE R VALUE : 0.282 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 606 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 807 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.47 REMARK 3 BIN R VALUE (WORKING SET) : 0.3340 REMARK 3 BIN FREE R VALUE SET COUNT : 47 REMARK 3 BIN FREE R VALUE : 0.4320 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1897 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 96.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.21000 REMARK 3 B22 (A**2) : 3.21000 REMARK 3 B33 (A**2) : -4.81000 REMARK 3 B12 (A**2) : 1.60000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.407 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.298 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.275 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 26.508 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1908 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2569 ; 1.313 ; 2.001 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 238 ; 5.568 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 84 ;38.959 ;25.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 377 ;21.513 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;18.922 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 299 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1394 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1194 ;11.965 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1933 ;16.268 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 714 ;15.806 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 636 ;20.534 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 6 A 117 REMARK 3 ORIGIN FOR THE GROUP (A): -27.5399 56.0861 -0.3582 REMARK 3 T TENSOR REMARK 3 T11: 0.6517 T22: 0.4354 REMARK 3 T33: 0.5392 T12: -0.2384 REMARK 3 T13: -0.0334 T23: 0.1722 REMARK 3 L TENSOR REMARK 3 L11: 1.4207 L22: 1.6919 REMARK 3 L33: 7.4020 L12: -0.5144 REMARK 3 L13: -2.7653 L23: 0.3878 REMARK 3 S TENSOR REMARK 3 S11: 0.1194 S12: -0.3095 S13: 0.1901 REMARK 3 S21: -0.1911 S22: -0.0819 S23: -0.6458 REMARK 3 S31: -1.1150 S32: 1.0809 S33: -0.0375 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 123 A 224 REMARK 3 ORIGIN FOR THE GROUP (A): -38.9931 32.9602 7.4056 REMARK 3 T TENSOR REMARK 3 T11: 0.2523 T22: 0.2833 REMARK 3 T33: 0.1118 T12: 0.0865 REMARK 3 T13: -0.0327 T23: 0.0347 REMARK 3 L TENSOR REMARK 3 L11: 1.0691 L22: 0.6558 REMARK 3 L33: 2.7345 L12: 0.3614 REMARK 3 L13: 0.4692 L23: 1.2229 REMARK 3 S TENSOR REMARK 3 S11: -0.0128 S12: -0.0692 S13: -0.0116 REMARK 3 S21: 0.0430 S22: 0.0399 S23: -0.0565 REMARK 3 S31: 0.2762 S32: 0.3990 S33: -0.0271 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3LJC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-FEB-10. REMARK 100 THE DEPOSITION ID IS D_1000057348. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : MIRROR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARCCD 300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12507 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 8.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05300 REMARK 200 FOR THE DATA SET : 33.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.05100 REMARK 200 R SYM FOR SHELL (I) : 0.53300 REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 06M MGFORMATE, PH 5.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.57467 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 27.28733 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 27.28733 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 54.57467 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MSE A 1 REMARK 465 ASN A 2 REMARK 465 PRO A 3 REMARK 465 GLU A 4 REMARK 465 ARG A 5 REMARK 465 SER A 6 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 118 CG CD OE1 OE2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 35 NZ REMARK 480 SER A 59 OG REMARK 480 LYS A 82 CG CD CE NZ REMARK 480 ASN A 106 CB CG OD1 ND2 REMARK 480 SER A 111 CB REMARK 480 GLU A 115 CB REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 59 CB SER A 59 OG -0.285 REMARK 500 SER A 111 CB SER A 111 OG 0.168 REMARK 500 GLU A 115 CB GLU A 115 CG 0.178 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 10 68.93 -118.78 REMARK 500 ASP A 18 28.00 -144.80 REMARK 500 PRO A 23 135.08 -38.50 REMARK 500 LYS A 56 -151.94 -140.02 REMARK 500 ALA A 58 86.38 52.39 REMARK 500 SER A 59 60.72 -62.55 REMARK 500 GLU A 62 78.80 -118.16 REMARK 500 PRO A 84 -34.80 -39.82 REMARK 500 LEU A 95 -68.48 -106.23 REMARK 500 GLU A 108 -56.65 -122.90 REMARK 500 ALA A 114 110.03 177.52 REMARK 500 GLU A 115 -160.12 -160.76 REMARK 500 TYR A 116 138.35 -176.65 REMARK 500 GLU A 118 82.25 -172.31 REMARK 500 PRO A 120 -154.51 -87.19 REMARK 500 ASP A 123 89.79 66.72 REMARK 500 LYS A 146 -4.99 71.45 REMARK 500 PRO A 150 -2.84 -59.30 REMARK 500 ILE A 159 127.63 -39.02 REMARK 500 ASP A 161 108.19 -54.16 REMARK 500 MSE A 244 -63.32 -137.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2ANE RELATED DB: PDB DBREF 3LJC A -6 245 UNP P0A9M0 LON_ECOLI 1 245 SEQADV 3LJC MSE A -6 UNP P0A9M0 EXPRESSION TAG SEQADV 3LJC HIS A -5 UNP P0A9M0 EXPRESSION TAG SEQADV 3LJC HIS A -4 UNP P0A9M0 EXPRESSION TAG SEQADV 3LJC HIS A -3 UNP P0A9M0 EXPRESSION TAG SEQADV 3LJC HIS A -2 UNP P0A9M0 EXPRESSION TAG SEQADV 3LJC HIS A -1 UNP P0A9M0 EXPRESSION TAG SEQADV 3LJC HIS A 0 UNP P0A9M0 EXPRESSION TAG SEQRES 1 A 252 MSE HIS HIS HIS HIS HIS HIS MSE ASN PRO GLU ARG SER SEQRES 2 A 252 GLU ARG ILE GLU ILE PRO VAL LEU PRO LEU ARG ASP VAL SEQRES 3 A 252 VAL VAL TYR PRO HIS MSE VAL ILE PRO LEU PHE VAL GLY SEQRES 4 A 252 ARG GLU LYS SER ILE ARG CYS LEU GLU ALA ALA MSE ASP SEQRES 5 A 252 HIS ASP LYS LYS ILE MSE LEU VAL ALA GLN LYS GLU ALA SEQRES 6 A 252 SER THR ASP GLU PRO GLY VAL ASN ASP LEU PHE THR VAL SEQRES 7 A 252 GLY THR VAL ALA SER ILE LEU GLN MSE LEU LYS LEU PRO SEQRES 8 A 252 ASP GLY THR VAL LYS VAL LEU VAL GLU GLY LEU GLN ARG SEQRES 9 A 252 ALA ARG ILE SER ALA LEU SER ASP ASN GLY GLU HIS PHE SEQRES 10 A 252 SER ALA LYS ALA GLU TYR LEU GLU SER PRO THR ILE ASP SEQRES 11 A 252 GLU ARG GLU GLN GLU VAL LEU VAL ARG THR ALA ILE SER SEQRES 12 A 252 GLN PHE GLU GLY TYR ILE LYS LEU ASN LYS LYS ILE PRO SEQRES 13 A 252 PRO GLU VAL LEU THR SER LEU ASN SER ILE ASP ASP PRO SEQRES 14 A 252 ALA ARG LEU ALA ASP THR ILE ALA ALA HIS MSE PRO LEU SEQRES 15 A 252 LYS LEU ALA ASP LYS GLN SER VAL LEU GLU MSE SER ASP SEQRES 16 A 252 VAL ASN GLU ARG LEU GLU TYR LEU MSE ALA MSE MSE GLU SEQRES 17 A 252 SER GLU ILE ASP LEU LEU GLN VAL GLU LYS ARG ILE ARG SEQRES 18 A 252 ASN ARG VAL LYS LYS GLN MSE GLU LYS SER GLN ARG GLU SEQRES 19 A 252 TYR TYR LEU ASN GLU GLN MSE LYS ALA ILE GLN LYS GLU SEQRES 20 A 252 LEU GLY GLU MSE ASP MODRES 3LJC MSE A 25 MET SELENOMETHIONINE MODRES 3LJC MSE A 44 MET SELENOMETHIONINE MODRES 3LJC MSE A 51 MET SELENOMETHIONINE MODRES 3LJC MSE A 80 MET SELENOMETHIONINE MODRES 3LJC MSE A 173 MET SELENOMETHIONINE MODRES 3LJC MSE A 186 MET SELENOMETHIONINE MODRES 3LJC MSE A 197 MET SELENOMETHIONINE MODRES 3LJC MSE A 199 MET SELENOMETHIONINE MODRES 3LJC MSE A 200 MET SELENOMETHIONINE MODRES 3LJC MSE A 221 MET SELENOMETHIONINE MODRES 3LJC MSE A 234 MET SELENOMETHIONINE MODRES 3LJC MSE A 244 MET SELENOMETHIONINE HET MSE A 25 8 HET MSE A 44 8 HET MSE A 51 8 HET MSE A 80 8 HET MSE A 173 8 HET MSE A 186 8 HET MSE A 197 8 HET MSE A 199 8 HET MSE A 200 8 HET MSE A 221 8 HET MSE A 234 8 HET MSE A 244 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 12(C5 H11 N O2 SE) HELIX 1 1 SER A 36 ASP A 45 1 10 HELIX 2 2 ASP A 123 LYS A 146 1 24 HELIX 3 3 PRO A 149 LEU A 156 1 8 HELIX 4 4 ASP A 161 HIS A 172 1 12 HELIX 5 5 LYS A 176 MSE A 186 1 11 HELIX 6 6 ASP A 188 GLU A 243 1 56 SHEET 1 A 7 VAL A 26 VAL A 31 0 SHEET 2 A 7 VAL A 88 ARG A 99 -1 O VAL A 90 N LEU A 29 SHEET 3 A 7 VAL A 71 ILE A 77 -1 N VAL A 74 O LEU A 95 SHEET 4 A 7 LYS A 49 ALA A 54 -1 N ILE A 50 O ALA A 75 SHEET 5 A 7 PRO A 12 LEU A 16 1 N LEU A 14 O MSE A 51 SHEET 6 A 7 HIS A 109 LYS A 113 -1 O PHE A 110 N VAL A 13 SHEET 7 A 7 ALA A 102 ASN A 106 -1 N SER A 104 O SER A 111 LINK C HIS A 24 N MSE A 25 1555 1555 1.34 LINK C MSE A 25 N VAL A 26 1555 1555 1.34 LINK C ALA A 43 N MSE A 44 1555 1555 1.33 LINK C MSE A 44 N ASP A 45 1555 1555 1.33 LINK C ILE A 50 N MSE A 51 1555 1555 1.33 LINK C MSE A 51 N LEU A 52 1555 1555 1.33 LINK C GLN A 79 N MSE A 80 1555 1555 1.34 LINK C MSE A 80 N LEU A 81 1555 1555 1.33 LINK C HIS A 172 N MSE A 173 1555 1555 1.33 LINK C MSE A 173 N PRO A 174 1555 1555 1.34 LINK C GLU A 185 N MSE A 186 1555 1555 1.33 LINK C MSE A 186 N SER A 187 1555 1555 1.33 LINK C LEU A 196 N MSE A 197 1555 1555 1.33 LINK C MSE A 197 N ALA A 198 1555 1555 1.34 LINK C ALA A 198 N MSE A 199 1555 1555 1.34 LINK C MSE A 199 N MSE A 200 1555 1555 1.34 LINK C MSE A 200 N GLU A 201 1555 1555 1.32 LINK C GLN A 220 N MSE A 221 1555 1555 1.34 LINK C MSE A 221 N GLU A 222 1555 1555 1.33 LINK C GLN A 233 N MSE A 234 1555 1555 1.32 LINK C MSE A 234 N LYS A 235 1555 1555 1.33 LINK C GLU A 243 N MSE A 244 1555 1555 1.33 LINK C MSE A 244 N ASP A 245 1555 1555 1.33 CISPEP 1 LYS A 113 ALA A 114 0 -8.64 CRYST1 91.568 91.568 81.862 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010921 0.006305 0.000000 0.00000 SCALE2 0.000000 0.012610 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012216 0.00000