data_3LMZ # _entry.id 3LMZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3LMZ pdb_00003lmz 10.2210/pdb3lmz/pdb RCSB RCSB057477 ? ? WWPDB D_1000057477 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 396625 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3LMZ _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-02-01 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of Putative sugar isomerase. (YP_001305105.1) from Parabacteroides distasonis ATCC 8503 at 1.44 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3LMZ _cell.length_a 78.594 _cell.length_b 81.906 _cell.length_c 95.485 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3LMZ _symmetry.Int_Tables_number 20 _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative sugar isomerase' 29503.688 1 ? ? ? ? 2 non-polymer syn 'CITRIC ACID' 192.124 1 ? ? ? ? 3 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 1 ? ? ? ? 4 non-polymer syn 'TRIETHYLENE GLYCOL' 150.173 1 ? ? ? ? 5 water nat water 18.015 410 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GALPDPVKPKAPKAVNPFHLG(MSE)AGYTFVNFDLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVT GYAVGPIY(MSE)KSEEEIDRAFDYAKRVGVKLIVGVPNYELLPYVDKKVKEYDFHYAIHLHGPDIKTYPDATDVWVHTK DLDPRIG(MSE)CLDVGHDLRNGCDPVADLKKYHTRVFD(MSE)HIKDVTDSSKAGVGIEIGRGKIDFPALIR(MSE) (MSE)REVNYTG(MSE)CSLEYEKD(MSE)KDPFLGIAESIGYFKAVSDLT ; _entity_poly.pdbx_seq_one_letter_code_can ;GALPDPVKPKAPKAVNPFHLGMAGYTFVNFDLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAV GPIYMKSEEEIDRAFDYAKRVGVKLIVGVPNYELLPYVDKKVKEYDFHYAIHLHGPDIKTYPDATDVWVHTKDLDPRIGM CLDVGHDLRNGCDPVADLKKYHTRVFDMHIKDVTDSSKAGVGIEIGRGKIDFPALIRMMREVNYTGMCSLEYEKDMKDPF LGIAESIGYFKAVSDLT ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 396625 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 LEU n 1 4 PRO n 1 5 ASP n 1 6 PRO n 1 7 VAL n 1 8 LYS n 1 9 PRO n 1 10 LYS n 1 11 ALA n 1 12 PRO n 1 13 LYS n 1 14 ALA n 1 15 VAL n 1 16 ASN n 1 17 PRO n 1 18 PHE n 1 19 HIS n 1 20 LEU n 1 21 GLY n 1 22 MSE n 1 23 ALA n 1 24 GLY n 1 25 TYR n 1 26 THR n 1 27 PHE n 1 28 VAL n 1 29 ASN n 1 30 PHE n 1 31 ASP n 1 32 LEU n 1 33 ASP n 1 34 THR n 1 35 THR n 1 36 LEU n 1 37 LYS n 1 38 THR n 1 39 LEU n 1 40 GLU n 1 41 ARG n 1 42 LEU n 1 43 ASP n 1 44 ILE n 1 45 HIS n 1 46 TYR n 1 47 LEU n 1 48 CYS n 1 49 ILE n 1 50 LYS n 1 51 ASP n 1 52 PHE n 1 53 HIS n 1 54 LEU n 1 55 PRO n 1 56 LEU n 1 57 ASN n 1 58 SER n 1 59 THR n 1 60 ASP n 1 61 GLU n 1 62 GLN n 1 63 ILE n 1 64 ARG n 1 65 ALA n 1 66 PHE n 1 67 HIS n 1 68 ASP n 1 69 LYS n 1 70 CYS n 1 71 ALA n 1 72 ALA n 1 73 HIS n 1 74 LYS n 1 75 VAL n 1 76 THR n 1 77 GLY n 1 78 TYR n 1 79 ALA n 1 80 VAL n 1 81 GLY n 1 82 PRO n 1 83 ILE n 1 84 TYR n 1 85 MSE n 1 86 LYS n 1 87 SER n 1 88 GLU n 1 89 GLU n 1 90 GLU n 1 91 ILE n 1 92 ASP n 1 93 ARG n 1 94 ALA n 1 95 PHE n 1 96 ASP n 1 97 TYR n 1 98 ALA n 1 99 LYS n 1 100 ARG n 1 101 VAL n 1 102 GLY n 1 103 VAL n 1 104 LYS n 1 105 LEU n 1 106 ILE n 1 107 VAL n 1 108 GLY n 1 109 VAL n 1 110 PRO n 1 111 ASN n 1 112 TYR n 1 113 GLU n 1 114 LEU n 1 115 LEU n 1 116 PRO n 1 117 TYR n 1 118 VAL n 1 119 ASP n 1 120 LYS n 1 121 LYS n 1 122 VAL n 1 123 LYS n 1 124 GLU n 1 125 TYR n 1 126 ASP n 1 127 PHE n 1 128 HIS n 1 129 TYR n 1 130 ALA n 1 131 ILE n 1 132 HIS n 1 133 LEU n 1 134 HIS n 1 135 GLY n 1 136 PRO n 1 137 ASP n 1 138 ILE n 1 139 LYS n 1 140 THR n 1 141 TYR n 1 142 PRO n 1 143 ASP n 1 144 ALA n 1 145 THR n 1 146 ASP n 1 147 VAL n 1 148 TRP n 1 149 VAL n 1 150 HIS n 1 151 THR n 1 152 LYS n 1 153 ASP n 1 154 LEU n 1 155 ASP n 1 156 PRO n 1 157 ARG n 1 158 ILE n 1 159 GLY n 1 160 MSE n 1 161 CYS n 1 162 LEU n 1 163 ASP n 1 164 VAL n 1 165 GLY n 1 166 HIS n 1 167 ASP n 1 168 LEU n 1 169 ARG n 1 170 ASN n 1 171 GLY n 1 172 CYS n 1 173 ASP n 1 174 PRO n 1 175 VAL n 1 176 ALA n 1 177 ASP n 1 178 LEU n 1 179 LYS n 1 180 LYS n 1 181 TYR n 1 182 HIS n 1 183 THR n 1 184 ARG n 1 185 VAL n 1 186 PHE n 1 187 ASP n 1 188 MSE n 1 189 HIS n 1 190 ILE n 1 191 LYS n 1 192 ASP n 1 193 VAL n 1 194 THR n 1 195 ASP n 1 196 SER n 1 197 SER n 1 198 LYS n 1 199 ALA n 1 200 GLY n 1 201 VAL n 1 202 GLY n 1 203 ILE n 1 204 GLU n 1 205 ILE n 1 206 GLY n 1 207 ARG n 1 208 GLY n 1 209 LYS n 1 210 ILE n 1 211 ASP n 1 212 PHE n 1 213 PRO n 1 214 ALA n 1 215 LEU n 1 216 ILE n 1 217 ARG n 1 218 MSE n 1 219 MSE n 1 220 ARG n 1 221 GLU n 1 222 VAL n 1 223 ASN n 1 224 TYR n 1 225 THR n 1 226 GLY n 1 227 MSE n 1 228 CYS n 1 229 SER n 1 230 LEU n 1 231 GLU n 1 232 TYR n 1 233 GLU n 1 234 LYS n 1 235 ASP n 1 236 MSE n 1 237 LYS n 1 238 ASP n 1 239 PRO n 1 240 PHE n 1 241 LEU n 1 242 GLY n 1 243 ILE n 1 244 ALA n 1 245 GLU n 1 246 SER n 1 247 ILE n 1 248 GLY n 1 249 TYR n 1 250 PHE n 1 251 LYS n 1 252 ALA n 1 253 VAL n 1 254 SER n 1 255 ASP n 1 256 LEU n 1 257 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene BDI_3797 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 8503 / DSM 20701 / NCTC 11152' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Parabacteroides distasonis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 435591 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A6LIG9_PARD8 _struct_ref.pdbx_db_accession A6LIG9 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ALPDPVKPKAPKAVNPFHLGMAGYTFVNFDLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVG PIYMKSEEEIDRAFDYAKRVGVKLIVGVPNYELLPYVDKKVKEYDFHYAIHLHGPDIKTYPDATDVWVHTKDLDPRIGMC LDVGHDLRNGCDPVADLKKYHTRVFDMHIKDVTDSSKAGVGIEIGRGKIDFPALIRMMREVNYTGMCSLEYEKDMKDPFL GIAESIGYFKAVSDLT ; _struct_ref.pdbx_align_begin 28 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3LMZ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 257 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A6LIG9 _struct_ref_seq.db_align_beg 28 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 283 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 28 _struct_ref_seq.pdbx_auth_seq_align_end 283 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3LMZ _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code A6LIG9 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CIT non-polymer . 'CITRIC ACID' ? 'C6 H8 O7' 192.124 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PGE non-polymer . 'TRIETHYLENE GLYCOL' ? 'C6 H14 O4' 150.173 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3LMZ # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.60 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 52.77 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 5.57 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '19.5000% polyethylene glycol 3000, 0.1M citric acid pH 5.57, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat collimating mirror, toroid focusing mirror' _diffrn_detector.pdbx_collection_date 2009-11-06 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91162 1.0 2 0.97944 1.0 3 0.97932 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL9-2 _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_wavelength_list 0.91162,0.97944,0.97932 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3LMZ _reflns.d_resolution_high 1.44 _reflns.d_resolution_low 28.355 _reflns.number_obs 47272 _reflns.pdbx_Rmerge_I_obs 0.053 _reflns.pdbx_netI_over_sigmaI 10.020 _reflns.percent_possible_obs 76.700 _reflns.B_iso_Wilson_estimate 17.141 _reflns.observed_criterion_sigma_I -3.00 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.44 1.49 18658 ? 8307 0.490 1.8 ? ? ? ? ? 79.00 1 1 1.49 1.55 20090 ? 8773 0.374 2.3 ? ? ? ? ? 81.20 2 1 1.55 1.62 20179 ? 8668 0.292 3.1 ? ? ? ? ? 80.40 3 1 1.62 1.71 21311 ? 9049 0.205 4.3 ? ? ? ? ? 79.60 4 1 1.71 1.81 18895 ? 7890 0.155 5.7 ? ? ? ? ? 78.70 5 1 1.81 1.95 20599 ? 8458 0.102 8.5 ? ? ? ? ? 77.40 6 1 1.95 2.15 20734 ? 8316 0.068 12.4 ? ? ? ? ? 75.80 7 1 2.15 2.46 20319 ? 7984 0.053 16.6 ? ? ? ? ? 73.90 8 1 2.46 3.10 20371 ? 7744 0.040 21.2 ? ? ? ? ? 71.70 9 1 3.10 28.355 20470 ? 7549 0.030 28.2 ? ? ? ? ? 69.70 10 1 # _refine.entry_id 3LMZ _refine.ls_d_res_high 1.440 _refine.ls_d_res_low 28.355 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 84.510 _refine.ls_number_reflns_obs 47252 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORDS CONTAIN RESIDUAL B FACTORS ONLY. 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. A CITRATE (CIT) MOLECULE IS MODELLED FROM CRYSTALLIZATION CONDITIONS, AND PEG-3000 FRAGMENT FROM CRYSTALLIZATION OR PEG-400 FRAGMENT FROM CRYO CONDITIONS (PEG AND PGE) ARE MODELED. 5. THE NOMINAL RESOLUTION IS 1.55 A WITH 9570 OBSERVED REFLECTIONS BETWEEN 1.55-1.44 A (87.7% COMPLETE FOR THIS SHELL) INCLUDED IN THE REFINEMENT. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.151 _refine.ls_R_factor_R_work 0.149 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.185 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 2401 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 19.044 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.630 _refine.aniso_B[2][2] 0.960 _refine.aniso_B[3][3] -0.330 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.976 _refine.correlation_coeff_Fo_to_Fc_free 0.967 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.063 _refine.pdbx_overall_ESU_R_Free 0.068 _refine.overall_SU_ML 0.041 _refine.overall_SU_B 2.072 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 67.95 _refine.B_iso_min 8.29 _refine.occupancy_max 1.00 _refine.occupancy_min 0.22 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2003 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 30 _refine_hist.number_atoms_solvent 410 _refine_hist.number_atoms_total 2443 _refine_hist.d_res_high 1.440 _refine_hist.d_res_low 28.355 # loop_ _refine_ls_restr.type _refine_ls_restr.pdbx_refine_id _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 'X-RAY DIFFRACTION' 2191 0.018 0.022 ? ? r_bond_other_d 'X-RAY DIFFRACTION' 1508 0.002 0.020 ? ? r_angle_refined_deg 'X-RAY DIFFRACTION' 2971 1.688 1.979 ? ? r_angle_other_deg 'X-RAY DIFFRACTION' 3690 0.979 3.000 ? ? r_dihedral_angle_1_deg 'X-RAY DIFFRACTION' 272 5.726 5.000 ? ? r_dihedral_angle_2_deg 'X-RAY DIFFRACTION' 96 34.271 23.750 ? ? r_dihedral_angle_3_deg 'X-RAY DIFFRACTION' 385 12.257 15.000 ? ? r_dihedral_angle_4_deg 'X-RAY DIFFRACTION' 11 14.498 15.000 ? ? r_chiral_restr 'X-RAY DIFFRACTION' 317 0.107 0.200 ? ? r_gen_planes_refined 'X-RAY DIFFRACTION' 2448 0.010 0.020 ? ? r_gen_planes_other 'X-RAY DIFFRACTION' 442 0.001 0.020 ? ? r_nbd_refined 'X-RAY DIFFRACTION' 475 0.245 0.200 ? ? r_nbd_other 'X-RAY DIFFRACTION' 1574 0.193 0.200 ? ? r_nbtor_refined 'X-RAY DIFFRACTION' 1062 0.182 0.200 ? ? r_nbtor_other 'X-RAY DIFFRACTION' 1039 0.086 0.200 ? ? r_xyhbond_nbd_refined 'X-RAY DIFFRACTION' 265 0.174 0.200 ? ? r_symmetry_vdw_refined 'X-RAY DIFFRACTION' 13 0.270 0.200 ? ? r_symmetry_vdw_other 'X-RAY DIFFRACTION' 53 0.262 0.200 ? ? r_symmetry_hbond_refined 'X-RAY DIFFRACTION' 34 0.156 0.200 ? ? r_mcbond_it 'X-RAY DIFFRACTION' 1465 1.763 3.000 ? ? r_mcbond_other 'X-RAY DIFFRACTION' 529 0.457 3.000 ? ? r_mcangle_it 'X-RAY DIFFRACTION' 2156 2.104 5.000 ? ? r_scbond_it 'X-RAY DIFFRACTION' 965 4.069 8.000 ? ? r_scangle_it 'X-RAY DIFFRACTION' 815 5.490 11.000 ? ? # _refine_ls_shell.d_res_high 1.440 _refine_ls_shell.d_res_low 1.478 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 86.230 _refine_ls_shell.number_reflns_R_work 3322 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.245 _refine_ls_shell.R_factor_R_free 0.319 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 186 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 3508 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3LMZ _struct.title 'Crystal structure of Putative sugar isomerase. (YP_001305105.1) from Parabacteroides distasonis ATCC 8503 at 1.44 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;Putative sugar isomerase., Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, ISOMERASE ; _struct_keywords.pdbx_keywords ISOMERASE _struct_keywords.entry_id 3LMZ # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 _struct_biol.details 'STATIC LIGHT SCATTERING SUPPORTS THE ASSIGNMENT OF A DIMER AS A SIGNIFICANT OLIGOMERIZATION STATE.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 24 ? VAL A 28 ? GLY A 50 VAL A 54 5 ? 5 HELX_P HELX_P2 2 ASP A 31 ? LEU A 42 ? ASP A 57 LEU A 68 1 ? 12 HELX_P HELX_P3 3 THR A 59 ? HIS A 73 ? THR A 85 HIS A 99 1 ? 15 HELX_P HELX_P4 4 SER A 87 ? GLY A 102 ? SER A 113 GLY A 128 1 ? 16 HELX_P HELX_P5 5 LEU A 114 ? ASP A 126 ? LEU A 140 ASP A 152 1 ? 13 HELX_P HELX_P6 6 ASP A 143 ? LYS A 152 ? ASP A 169 LYS A 178 1 ? 10 HELX_P HELX_P7 7 VAL A 164 ? ASN A 170 ? VAL A 190 ASN A 196 1 ? 7 HELX_P HELX_P8 8 ASP A 173 ? HIS A 182 ? ASP A 199 HIS A 208 1 ? 10 HELX_P HELX_P9 9 ASP A 211 ? VAL A 222 ? ASP A 237 VAL A 248 1 ? 12 HELX_P HELX_P10 10 PRO A 239 ? THR A 257 ? PRO A 265 THR A 283 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLY 21 C ? ? ? 1_555 A MSE 22 N A ? A GLY 47 A MSE 48 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale2 covale both ? A GLY 21 C ? ? ? 1_555 A MSE 22 N B ? A GLY 47 A MSE 48 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale3 covale both ? A MSE 22 C A ? ? 1_555 A ALA 23 N ? ? A MSE 48 A ALA 49 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale4 covale both ? A MSE 22 C B ? ? 1_555 A ALA 23 N ? ? A MSE 48 A ALA 49 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale5 covale both ? A TYR 84 C ? ? ? 1_555 A MSE 85 N ? ? A TYR 110 A MSE 111 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale6 covale both ? A MSE 85 C ? ? ? 1_555 A LYS 86 N ? ? A MSE 111 A LYS 112 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale7 covale both ? A GLY 159 C ? ? ? 1_555 A MSE 160 N ? ? A GLY 185 A MSE 186 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale8 covale both ? A MSE 160 C ? ? ? 1_555 A CYS 161 N ? ? A MSE 186 A CYS 187 1_555 ? ? ? ? ? ? ? 1.352 ? ? covale9 covale both ? A ASP 187 C ? ? ? 1_555 A MSE 188 N ? ? A ASP 213 A MSE 214 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale10 covale both ? A MSE 188 C ? ? ? 1_555 A HIS 189 N ? ? A MSE 214 A HIS 215 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale11 covale both ? A ARG 217 C ? ? ? 1_555 A MSE 218 N ? ? A ARG 243 A MSE 244 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale12 covale both ? A MSE 218 C ? ? ? 1_555 A MSE 219 N ? ? A MSE 244 A MSE 245 1_555 ? ? ? ? ? ? ? 1.314 ? ? covale13 covale both ? A MSE 219 C ? ? ? 1_555 A ARG 220 N ? ? A MSE 245 A ARG 246 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale14 covale both ? A GLY 226 C ? ? ? 1_555 A MSE 227 N A ? A GLY 252 A MSE 253 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale15 covale both ? A GLY 226 C ? ? ? 1_555 A MSE 227 N B ? A GLY 252 A MSE 253 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale16 covale both ? A MSE 227 C A ? ? 1_555 A CYS 228 N A ? A MSE 253 A CYS 254 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale17 covale both ? A MSE 227 C B ? ? 1_555 A CYS 228 N B ? A MSE 253 A CYS 254 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale18 covale both ? A ASP 235 C ? ? ? 1_555 A MSE 236 N ? ? A ASP 261 A MSE 262 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale19 covale both ? A MSE 236 C ? ? ? 1_555 A LYS 237 N ? ? A MSE 262 A LYS 263 1_555 ? ? ? ? ? ? ? 1.340 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 81 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 107 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 82 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 108 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 1.63 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 9 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel A 7 8 ? parallel A 8 9 ? parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 HIS A 19 ? MSE A 22 ? HIS A 45 MSE A 48 A 2 TYR A 46 ? ILE A 49 ? TYR A 72 ILE A 75 A 3 THR A 76 ? MSE A 85 ? THR A 102 MSE A 111 A 4 LEU A 105 ? PRO A 110 ? LEU A 131 PRO A 136 A 5 HIS A 128 ? HIS A 132 ? HIS A 154 HIS A 158 A 6 ILE A 158 ? ASP A 163 ? ILE A 184 ASP A 189 A 7 VAL A 185 ? ILE A 190 ? VAL A 211 ILE A 216 A 8 MSE A 227 ? LEU A 230 ? MSE A 253 LEU A 256 A 9 HIS A 19 ? MSE A 22 ? HIS A 45 MSE A 48 B 1 ASP A 192 ? VAL A 193 ? ASP A 218 VAL A 219 B 2 GLY A 202 ? ILE A 203 ? GLY A 228 ILE A 229 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N MSE A 22 ? N MSE A 48 O CYS A 48 ? O CYS A 74 A 2 3 N ILE A 49 ? N ILE A 75 O GLY A 81 ? O GLY A 107 A 3 4 N VAL A 80 ? N VAL A 106 O VAL A 107 ? O VAL A 133 A 4 5 N ILE A 106 ? N ILE A 132 O ALA A 130 ? O ALA A 156 A 5 6 N TYR A 129 ? N TYR A 155 O GLY A 159 ? O GLY A 185 A 6 7 N LEU A 162 ? N LEU A 188 O ASP A 187 ? O ASP A 213 A 7 8 N MSE A 188 ? N MSE A 214 O SER A 229 ? O SER A 255 A 8 9 O CYS A 228 ? O CYS A 254 N GLY A 21 ? N GLY A 47 B 1 2 N ASP A 192 ? N ASP A 218 O ILE A 203 ? O ILE A 229 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CIT 1 ? 13 'BINDING SITE FOR RESIDUE CIT A 1' AC2 Software A PEG 2 ? 7 'BINDING SITE FOR RESIDUE PEG A 2' AC3 Software A PGE 3 ? 5 'BINDING SITE FOR RESIDUE PGE A 3' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 13 HOH E . ? HOH A 6 . ? 1_555 ? 2 AC1 13 TYR A 25 ? TYR A 51 . ? 1_555 ? 3 AC1 13 LYS A 50 ? LYS A 76 . ? 1_555 ? 4 AC1 13 PRO A 82 ? PRO A 108 . ? 1_555 ? 5 AC1 13 TYR A 84 ? TYR A 110 . ? 1_555 ? 6 AC1 13 HIS A 132 ? HIS A 158 . ? 1_555 ? 7 AC1 13 HIS A 134 ? HIS A 160 . ? 1_555 ? 8 AC1 13 HIS A 166 ? HIS A 192 . ? 1_555 ? 9 AC1 13 LYS A 191 ? LYS A 217 . ? 1_555 ? 10 AC1 13 GLU A 231 ? GLU A 257 . ? 1_555 ? 11 AC1 13 GLU A 233 ? GLU A 259 . ? 1_555 ? 12 AC1 13 HOH E . ? HOH A 285 . ? 1_555 ? 13 AC1 13 HOH E . ? HOH A 370 . ? 1_555 ? 14 AC2 7 LYS A 99 ? LYS A 125 . ? 1_555 ? 15 AC2 7 GLU A 124 ? GLU A 150 . ? 1_555 ? 16 AC2 7 THR A 194 ? THR A 220 . ? 6_555 ? 17 AC2 7 ASP A 195 ? ASP A 221 . ? 6_555 ? 18 AC2 7 HOH E . ? HOH A 297 . ? 1_555 ? 19 AC2 7 HOH E . ? HOH A 526 . ? 1_555 ? 20 AC2 7 HOH E . ? HOH A 575 . ? 1_555 ? 21 AC3 5 ASP A 51 ? ASP A 77 . ? 4_566 ? 22 AC3 5 ASN A 57 ? ASN A 83 . ? 1_555 ? 23 AC3 5 HOH E . ? HOH A 589 . ? 4_566 ? 24 AC3 5 HOH E . ? HOH A 610 . ? 4_566 ? 25 AC3 5 HOH E . ? HOH A 645 . ? 1_555 ? # _atom_sites.entry_id 3LMZ _atom_sites.fract_transf_matrix[1][1] 0.012724 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012209 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010473 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 ALA 2 28 ? ? ? A . n A 1 3 LEU 3 29 ? ? ? A . n A 1 4 PRO 4 30 ? ? ? A . n A 1 5 ASP 5 31 ? ? ? A . n A 1 6 PRO 6 32 ? ? ? A . n A 1 7 VAL 7 33 33 VAL VAL A . n A 1 8 LYS 8 34 34 LYS LYS A . n A 1 9 PRO 9 35 35 PRO PRO A . n A 1 10 LYS 10 36 36 LYS LYS A . n A 1 11 ALA 11 37 37 ALA ALA A . n A 1 12 PRO 12 38 38 PRO PRO A . n A 1 13 LYS 13 39 39 LYS LYS A . n A 1 14 ALA 14 40 40 ALA ALA A . n A 1 15 VAL 15 41 41 VAL VAL A . n A 1 16 ASN 16 42 42 ASN ASN A . n A 1 17 PRO 17 43 43 PRO PRO A . n A 1 18 PHE 18 44 44 PHE PHE A . n A 1 19 HIS 19 45 45 HIS HIS A . n A 1 20 LEU 20 46 46 LEU LEU A . n A 1 21 GLY 21 47 47 GLY GLY A . n A 1 22 MSE 22 48 48 MSE MSE A . n A 1 23 ALA 23 49 49 ALA ALA A . n A 1 24 GLY 24 50 50 GLY GLY A . n A 1 25 TYR 25 51 51 TYR TYR A . n A 1 26 THR 26 52 52 THR THR A . n A 1 27 PHE 27 53 53 PHE PHE A . n A 1 28 VAL 28 54 54 VAL VAL A . n A 1 29 ASN 29 55 55 ASN ASN A . n A 1 30 PHE 30 56 56 PHE PHE A . n A 1 31 ASP 31 57 57 ASP ASP A . n A 1 32 LEU 32 58 58 LEU LEU A . n A 1 33 ASP 33 59 59 ASP ASP A . n A 1 34 THR 34 60 60 THR THR A . n A 1 35 THR 35 61 61 THR THR A . n A 1 36 LEU 36 62 62 LEU LEU A . n A 1 37 LYS 37 63 63 LYS LYS A . n A 1 38 THR 38 64 64 THR THR A . n A 1 39 LEU 39 65 65 LEU LEU A . n A 1 40 GLU 40 66 66 GLU GLU A . n A 1 41 ARG 41 67 67 ARG ARG A . n A 1 42 LEU 42 68 68 LEU LEU A . n A 1 43 ASP 43 69 69 ASP ASP A . n A 1 44 ILE 44 70 70 ILE ILE A . n A 1 45 HIS 45 71 71 HIS HIS A . n A 1 46 TYR 46 72 72 TYR TYR A . n A 1 47 LEU 47 73 73 LEU LEU A . n A 1 48 CYS 48 74 74 CYS CYS A . n A 1 49 ILE 49 75 75 ILE ILE A . n A 1 50 LYS 50 76 76 LYS LYS A . n A 1 51 ASP 51 77 77 ASP ASP A . n A 1 52 PHE 52 78 78 PHE PHE A . n A 1 53 HIS 53 79 79 HIS HIS A . n A 1 54 LEU 54 80 80 LEU LEU A . n A 1 55 PRO 55 81 81 PRO PRO A . n A 1 56 LEU 56 82 82 LEU LEU A . n A 1 57 ASN 57 83 83 ASN ASN A . n A 1 58 SER 58 84 84 SER SER A . n A 1 59 THR 59 85 85 THR THR A . n A 1 60 ASP 60 86 86 ASP ASP A . n A 1 61 GLU 61 87 87 GLU GLU A . n A 1 62 GLN 62 88 88 GLN GLN A . n A 1 63 ILE 63 89 89 ILE ILE A . n A 1 64 ARG 64 90 90 ARG ARG A . n A 1 65 ALA 65 91 91 ALA ALA A . n A 1 66 PHE 66 92 92 PHE PHE A . n A 1 67 HIS 67 93 93 HIS HIS A . n A 1 68 ASP 68 94 94 ASP ASP A . n A 1 69 LYS 69 95 95 LYS LYS A . n A 1 70 CYS 70 96 96 CYS CYS A . n A 1 71 ALA 71 97 97 ALA ALA A . n A 1 72 ALA 72 98 98 ALA ALA A . n A 1 73 HIS 73 99 99 HIS HIS A . n A 1 74 LYS 74 100 100 LYS LYS A . n A 1 75 VAL 75 101 101 VAL VAL A . n A 1 76 THR 76 102 102 THR THR A . n A 1 77 GLY 77 103 103 GLY GLY A . n A 1 78 TYR 78 104 104 TYR TYR A . n A 1 79 ALA 79 105 105 ALA ALA A . n A 1 80 VAL 80 106 106 VAL VAL A . n A 1 81 GLY 81 107 107 GLY GLY A . n A 1 82 PRO 82 108 108 PRO PRO A . n A 1 83 ILE 83 109 109 ILE ILE A . n A 1 84 TYR 84 110 110 TYR TYR A . n A 1 85 MSE 85 111 111 MSE MSE A . n A 1 86 LYS 86 112 112 LYS LYS A . n A 1 87 SER 87 113 113 SER SER A . n A 1 88 GLU 88 114 114 GLU GLU A . n A 1 89 GLU 89 115 115 GLU GLU A . n A 1 90 GLU 90 116 116 GLU GLU A . n A 1 91 ILE 91 117 117 ILE ILE A . n A 1 92 ASP 92 118 118 ASP ASP A . n A 1 93 ARG 93 119 119 ARG ARG A . n A 1 94 ALA 94 120 120 ALA ALA A . n A 1 95 PHE 95 121 121 PHE PHE A . n A 1 96 ASP 96 122 122 ASP ASP A . n A 1 97 TYR 97 123 123 TYR TYR A . n A 1 98 ALA 98 124 124 ALA ALA A . n A 1 99 LYS 99 125 125 LYS LYS A . n A 1 100 ARG 100 126 126 ARG ARG A . n A 1 101 VAL 101 127 127 VAL VAL A . n A 1 102 GLY 102 128 128 GLY GLY A . n A 1 103 VAL 103 129 129 VAL VAL A . n A 1 104 LYS 104 130 130 LYS LYS A . n A 1 105 LEU 105 131 131 LEU LEU A . n A 1 106 ILE 106 132 132 ILE ILE A . n A 1 107 VAL 107 133 133 VAL VAL A . n A 1 108 GLY 108 134 134 GLY GLY A . n A 1 109 VAL 109 135 135 VAL VAL A . n A 1 110 PRO 110 136 136 PRO PRO A . n A 1 111 ASN 111 137 137 ASN ASN A . n A 1 112 TYR 112 138 138 TYR TYR A . n A 1 113 GLU 113 139 139 GLU GLU A . n A 1 114 LEU 114 140 140 LEU LEU A . n A 1 115 LEU 115 141 141 LEU LEU A . n A 1 116 PRO 116 142 142 PRO PRO A . n A 1 117 TYR 117 143 143 TYR TYR A . n A 1 118 VAL 118 144 144 VAL VAL A . n A 1 119 ASP 119 145 145 ASP ASP A . n A 1 120 LYS 120 146 146 LYS LYS A . n A 1 121 LYS 121 147 147 LYS LYS A . n A 1 122 VAL 122 148 148 VAL VAL A . n A 1 123 LYS 123 149 149 LYS LYS A . n A 1 124 GLU 124 150 150 GLU GLU A . n A 1 125 TYR 125 151 151 TYR TYR A . n A 1 126 ASP 126 152 152 ASP ASP A . n A 1 127 PHE 127 153 153 PHE PHE A . n A 1 128 HIS 128 154 154 HIS HIS A . n A 1 129 TYR 129 155 155 TYR TYR A . n A 1 130 ALA 130 156 156 ALA ALA A . n A 1 131 ILE 131 157 157 ILE ILE A . n A 1 132 HIS 132 158 158 HIS HIS A . n A 1 133 LEU 133 159 159 LEU LEU A . n A 1 134 HIS 134 160 160 HIS HIS A . n A 1 135 GLY 135 161 161 GLY GLY A . n A 1 136 PRO 136 162 162 PRO PRO A . n A 1 137 ASP 137 163 163 ASP ASP A . n A 1 138 ILE 138 164 164 ILE ILE A . n A 1 139 LYS 139 165 165 LYS LYS A . n A 1 140 THR 140 166 166 THR THR A . n A 1 141 TYR 141 167 167 TYR TYR A . n A 1 142 PRO 142 168 168 PRO PRO A . n A 1 143 ASP 143 169 169 ASP ASP A . n A 1 144 ALA 144 170 170 ALA ALA A . n A 1 145 THR 145 171 171 THR THR A . n A 1 146 ASP 146 172 172 ASP ASP A . n A 1 147 VAL 147 173 173 VAL VAL A . n A 1 148 TRP 148 174 174 TRP TRP A . n A 1 149 VAL 149 175 175 VAL VAL A . n A 1 150 HIS 150 176 176 HIS HIS A . n A 1 151 THR 151 177 177 THR THR A . n A 1 152 LYS 152 178 178 LYS LYS A . n A 1 153 ASP 153 179 179 ASP ASP A . n A 1 154 LEU 154 180 180 LEU LEU A . n A 1 155 ASP 155 181 181 ASP ASP A . n A 1 156 PRO 156 182 182 PRO PRO A . n A 1 157 ARG 157 183 183 ARG ARG A . n A 1 158 ILE 158 184 184 ILE ILE A . n A 1 159 GLY 159 185 185 GLY GLY A . n A 1 160 MSE 160 186 186 MSE MSE A . n A 1 161 CYS 161 187 187 CYS CYS A . n A 1 162 LEU 162 188 188 LEU LEU A . n A 1 163 ASP 163 189 189 ASP ASP A . n A 1 164 VAL 164 190 190 VAL VAL A . n A 1 165 GLY 165 191 191 GLY GLY A . n A 1 166 HIS 166 192 192 HIS HIS A . n A 1 167 ASP 167 193 193 ASP ASP A . n A 1 168 LEU 168 194 194 LEU LEU A . n A 1 169 ARG 169 195 195 ARG ARG A . n A 1 170 ASN 170 196 196 ASN ASN A . n A 1 171 GLY 171 197 197 GLY GLY A . n A 1 172 CYS 172 198 198 CYS CYS A . n A 1 173 ASP 173 199 199 ASP ASP A . n A 1 174 PRO 174 200 200 PRO PRO A . n A 1 175 VAL 175 201 201 VAL VAL A . n A 1 176 ALA 176 202 202 ALA ALA A . n A 1 177 ASP 177 203 203 ASP ASP A . n A 1 178 LEU 178 204 204 LEU LEU A . n A 1 179 LYS 179 205 205 LYS LYS A . n A 1 180 LYS 180 206 206 LYS LYS A . n A 1 181 TYR 181 207 207 TYR TYR A . n A 1 182 HIS 182 208 208 HIS HIS A . n A 1 183 THR 183 209 209 THR THR A . n A 1 184 ARG 184 210 210 ARG ARG A . n A 1 185 VAL 185 211 211 VAL VAL A . n A 1 186 PHE 186 212 212 PHE PHE A . n A 1 187 ASP 187 213 213 ASP ASP A . n A 1 188 MSE 188 214 214 MSE MSE A . n A 1 189 HIS 189 215 215 HIS HIS A . n A 1 190 ILE 190 216 216 ILE ILE A . n A 1 191 LYS 191 217 217 LYS LYS A . n A 1 192 ASP 192 218 218 ASP ASP A . n A 1 193 VAL 193 219 219 VAL VAL A . n A 1 194 THR 194 220 220 THR THR A . n A 1 195 ASP 195 221 221 ASP ASP A . n A 1 196 SER 196 222 222 SER SER A . n A 1 197 SER 197 223 223 SER SER A . n A 1 198 LYS 198 224 224 LYS LYS A . n A 1 199 ALA 199 225 225 ALA ALA A . n A 1 200 GLY 200 226 226 GLY GLY A . n A 1 201 VAL 201 227 227 VAL VAL A . n A 1 202 GLY 202 228 228 GLY GLY A . n A 1 203 ILE 203 229 229 ILE ILE A . n A 1 204 GLU 204 230 230 GLU GLU A . n A 1 205 ILE 205 231 231 ILE ILE A . n A 1 206 GLY 206 232 232 GLY GLY A . n A 1 207 ARG 207 233 233 ARG ARG A . n A 1 208 GLY 208 234 234 GLY GLY A . n A 1 209 LYS 209 235 235 LYS LYS A . n A 1 210 ILE 210 236 236 ILE ILE A . n A 1 211 ASP 211 237 237 ASP ASP A . n A 1 212 PHE 212 238 238 PHE PHE A . n A 1 213 PRO 213 239 239 PRO PRO A . n A 1 214 ALA 214 240 240 ALA ALA A . n A 1 215 LEU 215 241 241 LEU LEU A . n A 1 216 ILE 216 242 242 ILE ILE A . n A 1 217 ARG 217 243 243 ARG ARG A . n A 1 218 MSE 218 244 244 MSE MSE A . n A 1 219 MSE 219 245 245 MSE MSE A . n A 1 220 ARG 220 246 246 ARG ARG A . n A 1 221 GLU 221 247 247 GLU GLU A . n A 1 222 VAL 222 248 248 VAL VAL A . n A 1 223 ASN 223 249 249 ASN ASN A . n A 1 224 TYR 224 250 250 TYR TYR A . n A 1 225 THR 225 251 251 THR THR A . n A 1 226 GLY 226 252 252 GLY GLY A . n A 1 227 MSE 227 253 253 MSE MSE A . n A 1 228 CYS 228 254 254 CYS CYS A . n A 1 229 SER 229 255 255 SER SER A . n A 1 230 LEU 230 256 256 LEU LEU A . n A 1 231 GLU 231 257 257 GLU GLU A . n A 1 232 TYR 232 258 258 TYR TYR A . n A 1 233 GLU 233 259 259 GLU GLU A . n A 1 234 LYS 234 260 260 LYS LYS A . n A 1 235 ASP 235 261 261 ASP ASP A . n A 1 236 MSE 236 262 262 MSE MSE A . n A 1 237 LYS 237 263 263 LYS LYS A . n A 1 238 ASP 238 264 264 ASP ASP A . n A 1 239 PRO 239 265 265 PRO PRO A . n A 1 240 PHE 240 266 266 PHE PHE A . n A 1 241 LEU 241 267 267 LEU LEU A . n A 1 242 GLY 242 268 268 GLY GLY A . n A 1 243 ILE 243 269 269 ILE ILE A . n A 1 244 ALA 244 270 270 ALA ALA A . n A 1 245 GLU 245 271 271 GLU GLU A . n A 1 246 SER 246 272 272 SER SER A . n A 1 247 ILE 247 273 273 ILE ILE A . n A 1 248 GLY 248 274 274 GLY GLY A . n A 1 249 TYR 249 275 275 TYR TYR A . n A 1 250 PHE 250 276 276 PHE PHE A . n A 1 251 LYS 251 277 277 LYS LYS A . n A 1 252 ALA 252 278 278 ALA ALA A . n A 1 253 VAL 253 279 279 VAL VAL A . n A 1 254 SER 254 280 280 SER SER A . n A 1 255 ASP 255 281 281 ASP ASP A . n A 1 256 LEU 256 282 282 LEU LEU A . n A 1 257 THR 257 283 283 THR THR A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CIT 1 1 1 CIT CIT A . C 3 PEG 1 2 2 PEG PEG A . D 4 PGE 1 3 3 PGE PGE A . E 5 HOH 1 4 4 HOH HOH A . E 5 HOH 2 5 5 HOH HOH A . E 5 HOH 3 6 6 HOH HOH A . E 5 HOH 4 7 7 HOH HOH A . E 5 HOH 5 8 8 HOH HOH A . E 5 HOH 6 9 9 HOH HOH A . E 5 HOH 7 10 10 HOH HOH A . E 5 HOH 8 11 11 HOH HOH A . E 5 HOH 9 12 12 HOH HOH A . E 5 HOH 10 13 13 HOH HOH A . E 5 HOH 11 14 14 HOH HOH A . E 5 HOH 12 15 15 HOH HOH A . E 5 HOH 13 16 16 HOH HOH A . E 5 HOH 14 17 17 HOH HOH A . E 5 HOH 15 18 18 HOH HOH A . E 5 HOH 16 19 19 HOH HOH A . E 5 HOH 17 20 20 HOH HOH A . E 5 HOH 18 21 21 HOH HOH A . E 5 HOH 19 22 22 HOH HOH A . E 5 HOH 20 23 23 HOH HOH A . E 5 HOH 21 24 24 HOH HOH A . E 5 HOH 22 25 25 HOH HOH A . E 5 HOH 23 26 26 HOH HOH A . E 5 HOH 24 284 284 HOH HOH A . E 5 HOH 25 285 285 HOH HOH A . E 5 HOH 26 286 286 HOH HOH A . E 5 HOH 27 287 287 HOH HOH A . E 5 HOH 28 288 288 HOH HOH A . E 5 HOH 29 289 289 HOH HOH A . E 5 HOH 30 290 290 HOH HOH A . E 5 HOH 31 291 291 HOH HOH A . E 5 HOH 32 292 292 HOH HOH A . E 5 HOH 33 293 293 HOH HOH A . E 5 HOH 34 294 294 HOH HOH A . E 5 HOH 35 295 295 HOH HOH A . E 5 HOH 36 296 296 HOH HOH A . E 5 HOH 37 297 297 HOH HOH A . E 5 HOH 38 298 298 HOH HOH A . E 5 HOH 39 299 299 HOH HOH A . E 5 HOH 40 300 300 HOH HOH A . E 5 HOH 41 301 301 HOH HOH A . E 5 HOH 42 302 302 HOH HOH A . E 5 HOH 43 303 303 HOH HOH A . E 5 HOH 44 304 304 HOH HOH A . E 5 HOH 45 305 305 HOH HOH A . E 5 HOH 46 306 306 HOH HOH A . E 5 HOH 47 307 307 HOH HOH A . E 5 HOH 48 308 308 HOH HOH A . E 5 HOH 49 309 309 HOH HOH A . E 5 HOH 50 310 310 HOH HOH A . E 5 HOH 51 311 311 HOH HOH A . E 5 HOH 52 312 312 HOH HOH A . E 5 HOH 53 313 313 HOH HOH A . E 5 HOH 54 314 314 HOH HOH A . E 5 HOH 55 315 315 HOH HOH A . E 5 HOH 56 316 316 HOH HOH A . E 5 HOH 57 317 317 HOH HOH A . E 5 HOH 58 318 318 HOH HOH A . E 5 HOH 59 319 319 HOH HOH A . E 5 HOH 60 320 320 HOH HOH A . E 5 HOH 61 321 321 HOH HOH A . E 5 HOH 62 322 322 HOH HOH A . E 5 HOH 63 323 323 HOH HOH A . E 5 HOH 64 324 324 HOH HOH A . E 5 HOH 65 325 325 HOH HOH A . E 5 HOH 66 326 326 HOH HOH A . E 5 HOH 67 327 327 HOH HOH A . E 5 HOH 68 328 328 HOH HOH A . E 5 HOH 69 329 329 HOH HOH A . E 5 HOH 70 330 330 HOH HOH A . E 5 HOH 71 331 331 HOH HOH A . E 5 HOH 72 332 332 HOH HOH A . E 5 HOH 73 333 333 HOH HOH A . E 5 HOH 74 334 334 HOH HOH A . E 5 HOH 75 335 335 HOH HOH A . E 5 HOH 76 336 336 HOH HOH A . E 5 HOH 77 337 337 HOH HOH A . E 5 HOH 78 338 338 HOH HOH A . E 5 HOH 79 339 339 HOH HOH A . E 5 HOH 80 340 340 HOH HOH A . E 5 HOH 81 341 341 HOH HOH A . E 5 HOH 82 342 342 HOH HOH A . E 5 HOH 83 343 343 HOH HOH A . E 5 HOH 84 344 344 HOH HOH A . E 5 HOH 85 345 345 HOH HOH A . E 5 HOH 86 346 346 HOH HOH A . E 5 HOH 87 347 347 HOH HOH A . E 5 HOH 88 348 348 HOH HOH A . E 5 HOH 89 349 349 HOH HOH A . E 5 HOH 90 350 350 HOH HOH A . E 5 HOH 91 351 351 HOH HOH A . E 5 HOH 92 352 352 HOH HOH A . E 5 HOH 93 353 353 HOH HOH A . E 5 HOH 94 354 354 HOH HOH A . E 5 HOH 95 355 355 HOH HOH A . E 5 HOH 96 356 356 HOH HOH A . E 5 HOH 97 357 357 HOH HOH A . E 5 HOH 98 358 358 HOH HOH A . E 5 HOH 99 359 359 HOH HOH A . E 5 HOH 100 360 360 HOH HOH A . E 5 HOH 101 361 361 HOH HOH A . E 5 HOH 102 362 362 HOH HOH A . E 5 HOH 103 363 363 HOH HOH A . E 5 HOH 104 364 364 HOH HOH A . E 5 HOH 105 365 365 HOH HOH A . E 5 HOH 106 366 366 HOH HOH A . E 5 HOH 107 367 367 HOH HOH A . E 5 HOH 108 368 368 HOH HOH A . E 5 HOH 109 369 369 HOH HOH A . E 5 HOH 110 370 370 HOH HOH A . E 5 HOH 111 371 371 HOH HOH A . E 5 HOH 112 372 372 HOH HOH A . E 5 HOH 113 373 373 HOH HOH A . E 5 HOH 114 374 374 HOH HOH A . E 5 HOH 115 375 375 HOH HOH A . E 5 HOH 116 376 376 HOH HOH A . E 5 HOH 117 377 377 HOH HOH A . E 5 HOH 118 378 378 HOH HOH A . E 5 HOH 119 379 379 HOH HOH A . E 5 HOH 120 380 380 HOH HOH A . E 5 HOH 121 381 381 HOH HOH A . E 5 HOH 122 382 382 HOH HOH A . E 5 HOH 123 383 383 HOH HOH A . E 5 HOH 124 384 384 HOH HOH A . E 5 HOH 125 385 385 HOH HOH A . E 5 HOH 126 386 386 HOH HOH A . E 5 HOH 127 387 387 HOH HOH A . E 5 HOH 128 388 388 HOH HOH A . E 5 HOH 129 389 389 HOH HOH A . E 5 HOH 130 390 390 HOH HOH A . E 5 HOH 131 391 391 HOH HOH A . E 5 HOH 132 392 392 HOH HOH A . E 5 HOH 133 393 393 HOH HOH A . E 5 HOH 134 394 394 HOH HOH A . E 5 HOH 135 395 395 HOH HOH A . E 5 HOH 136 396 396 HOH HOH A . E 5 HOH 137 397 397 HOH HOH A . E 5 HOH 138 398 398 HOH HOH A . E 5 HOH 139 399 399 HOH HOH A . E 5 HOH 140 400 400 HOH HOH A . E 5 HOH 141 401 401 HOH HOH A . E 5 HOH 142 402 402 HOH HOH A . E 5 HOH 143 403 403 HOH HOH A . E 5 HOH 144 404 404 HOH HOH A . E 5 HOH 145 405 405 HOH HOH A . E 5 HOH 146 406 406 HOH HOH A . E 5 HOH 147 407 407 HOH HOH A . E 5 HOH 148 408 408 HOH HOH A . E 5 HOH 149 409 409 HOH HOH A . E 5 HOH 150 410 410 HOH HOH A . E 5 HOH 151 411 411 HOH HOH A . E 5 HOH 152 412 412 HOH HOH A . E 5 HOH 153 413 413 HOH HOH A . E 5 HOH 154 414 27 HOH HOH A . E 5 HOH 155 415 28 HOH HOH A . E 5 HOH 156 416 29 HOH HOH A . E 5 HOH 157 417 30 HOH HOH A . E 5 HOH 158 418 31 HOH HOH A . E 5 HOH 159 419 32 HOH HOH A . E 5 HOH 160 420 33 HOH HOH A . E 5 HOH 161 421 34 HOH HOH A . E 5 HOH 162 422 35 HOH HOH A . E 5 HOH 163 423 36 HOH HOH A . E 5 HOH 164 424 37 HOH HOH A . E 5 HOH 165 425 38 HOH HOH A . E 5 HOH 166 426 39 HOH HOH A . E 5 HOH 167 427 40 HOH HOH A . E 5 HOH 168 428 41 HOH HOH A . E 5 HOH 169 429 42 HOH HOH A . E 5 HOH 170 430 43 HOH HOH A . E 5 HOH 171 431 44 HOH HOH A . E 5 HOH 172 432 45 HOH HOH A . E 5 HOH 173 433 46 HOH HOH A . E 5 HOH 174 434 47 HOH HOH A . E 5 HOH 175 435 48 HOH HOH A . E 5 HOH 176 436 49 HOH HOH A . E 5 HOH 177 437 50 HOH HOH A . E 5 HOH 178 438 51 HOH HOH A . E 5 HOH 179 439 52 HOH HOH A . E 5 HOH 180 440 53 HOH HOH A . E 5 HOH 181 441 54 HOH HOH A . E 5 HOH 182 442 55 HOH HOH A . E 5 HOH 183 443 56 HOH HOH A . E 5 HOH 184 444 57 HOH HOH A . E 5 HOH 185 445 58 HOH HOH A . E 5 HOH 186 446 59 HOH HOH A . E 5 HOH 187 447 60 HOH HOH A . E 5 HOH 188 448 61 HOH HOH A . E 5 HOH 189 449 62 HOH HOH A . E 5 HOH 190 450 63 HOH HOH A . E 5 HOH 191 451 64 HOH HOH A . E 5 HOH 192 452 65 HOH HOH A . E 5 HOH 193 453 66 HOH HOH A . E 5 HOH 194 454 67 HOH HOH A . E 5 HOH 195 455 68 HOH HOH A . E 5 HOH 196 456 69 HOH HOH A . E 5 HOH 197 457 70 HOH HOH A . E 5 HOH 198 458 71 HOH HOH A . E 5 HOH 199 459 72 HOH HOH A . E 5 HOH 200 460 73 HOH HOH A . E 5 HOH 201 461 74 HOH HOH A . E 5 HOH 202 462 75 HOH HOH A . E 5 HOH 203 463 76 HOH HOH A . E 5 HOH 204 464 77 HOH HOH A . E 5 HOH 205 465 78 HOH HOH A . E 5 HOH 206 466 79 HOH HOH A . E 5 HOH 207 467 80 HOH HOH A . E 5 HOH 208 468 81 HOH HOH A . E 5 HOH 209 469 82 HOH HOH A . E 5 HOH 210 470 83 HOH HOH A . E 5 HOH 211 471 84 HOH HOH A . E 5 HOH 212 472 85 HOH HOH A . E 5 HOH 213 473 86 HOH HOH A . E 5 HOH 214 474 87 HOH HOH A . E 5 HOH 215 475 88 HOH HOH A . E 5 HOH 216 476 89 HOH HOH A . E 5 HOH 217 477 90 HOH HOH A . E 5 HOH 218 478 91 HOH HOH A . E 5 HOH 219 479 92 HOH HOH A . E 5 HOH 220 480 93 HOH HOH A . E 5 HOH 221 481 94 HOH HOH A . E 5 HOH 222 482 95 HOH HOH A . E 5 HOH 223 483 96 HOH HOH A . E 5 HOH 224 484 97 HOH HOH A . E 5 HOH 225 485 98 HOH HOH A . E 5 HOH 226 486 99 HOH HOH A . E 5 HOH 227 487 100 HOH HOH A . E 5 HOH 228 488 101 HOH HOH A . E 5 HOH 229 489 102 HOH HOH A . E 5 HOH 230 490 103 HOH HOH A . E 5 HOH 231 491 104 HOH HOH A . E 5 HOH 232 492 105 HOH HOH A . E 5 HOH 233 493 106 HOH HOH A . E 5 HOH 234 494 107 HOH HOH A . E 5 HOH 235 495 108 HOH HOH A . E 5 HOH 236 496 109 HOH HOH A . E 5 HOH 237 497 110 HOH HOH A . E 5 HOH 238 498 111 HOH HOH A . E 5 HOH 239 499 112 HOH HOH A . E 5 HOH 240 500 113 HOH HOH A . E 5 HOH 241 501 114 HOH HOH A . E 5 HOH 242 502 115 HOH HOH A . E 5 HOH 243 503 116 HOH HOH A . E 5 HOH 244 504 117 HOH HOH A . E 5 HOH 245 505 118 HOH HOH A . E 5 HOH 246 506 119 HOH HOH A . E 5 HOH 247 507 120 HOH HOH A . E 5 HOH 248 508 121 HOH HOH A . E 5 HOH 249 509 122 HOH HOH A . E 5 HOH 250 510 123 HOH HOH A . E 5 HOH 251 511 124 HOH HOH A . E 5 HOH 252 512 125 HOH HOH A . E 5 HOH 253 513 126 HOH HOH A . E 5 HOH 254 514 127 HOH HOH A . E 5 HOH 255 515 128 HOH HOH A . E 5 HOH 256 516 129 HOH HOH A . E 5 HOH 257 517 130 HOH HOH A . E 5 HOH 258 518 131 HOH HOH A . E 5 HOH 259 519 132 HOH HOH A . E 5 HOH 260 520 133 HOH HOH A . E 5 HOH 261 521 134 HOH HOH A . E 5 HOH 262 522 135 HOH HOH A . E 5 HOH 263 523 136 HOH HOH A . E 5 HOH 264 524 137 HOH HOH A . E 5 HOH 265 525 138 HOH HOH A . E 5 HOH 266 526 139 HOH HOH A . E 5 HOH 267 527 140 HOH HOH A . E 5 HOH 268 528 141 HOH HOH A . E 5 HOH 269 529 142 HOH HOH A . E 5 HOH 270 530 143 HOH HOH A . E 5 HOH 271 531 144 HOH HOH A . E 5 HOH 272 532 145 HOH HOH A . E 5 HOH 273 533 146 HOH HOH A . E 5 HOH 274 534 147 HOH HOH A . E 5 HOH 275 535 148 HOH HOH A . E 5 HOH 276 536 149 HOH HOH A . E 5 HOH 277 537 150 HOH HOH A . E 5 HOH 278 538 151 HOH HOH A . E 5 HOH 279 539 152 HOH HOH A . E 5 HOH 280 540 153 HOH HOH A . E 5 HOH 281 541 154 HOH HOH A . E 5 HOH 282 542 155 HOH HOH A . E 5 HOH 283 543 156 HOH HOH A . E 5 HOH 284 544 157 HOH HOH A . E 5 HOH 285 545 158 HOH HOH A . E 5 HOH 286 546 159 HOH HOH A . E 5 HOH 287 547 160 HOH HOH A . E 5 HOH 288 548 161 HOH HOH A . E 5 HOH 289 549 162 HOH HOH A . E 5 HOH 290 550 163 HOH HOH A . E 5 HOH 291 551 164 HOH HOH A . E 5 HOH 292 552 165 HOH HOH A . E 5 HOH 293 553 166 HOH HOH A . E 5 HOH 294 554 167 HOH HOH A . E 5 HOH 295 555 168 HOH HOH A . E 5 HOH 296 556 169 HOH HOH A . E 5 HOH 297 557 170 HOH HOH A . E 5 HOH 298 558 171 HOH HOH A . E 5 HOH 299 559 172 HOH HOH A . E 5 HOH 300 560 173 HOH HOH A . E 5 HOH 301 561 174 HOH HOH A . E 5 HOH 302 562 175 HOH HOH A . E 5 HOH 303 563 176 HOH HOH A . E 5 HOH 304 564 177 HOH HOH A . E 5 HOH 305 565 178 HOH HOH A . E 5 HOH 306 566 179 HOH HOH A . E 5 HOH 307 567 180 HOH HOH A . E 5 HOH 308 568 181 HOH HOH A . E 5 HOH 309 569 182 HOH HOH A . E 5 HOH 310 570 183 HOH HOH A . E 5 HOH 311 571 184 HOH HOH A . E 5 HOH 312 572 185 HOH HOH A . E 5 HOH 313 573 186 HOH HOH A . E 5 HOH 314 574 187 HOH HOH A . E 5 HOH 315 575 188 HOH HOH A . E 5 HOH 316 576 189 HOH HOH A . E 5 HOH 317 577 190 HOH HOH A . E 5 HOH 318 578 191 HOH HOH A . E 5 HOH 319 579 192 HOH HOH A . E 5 HOH 320 580 193 HOH HOH A . E 5 HOH 321 581 194 HOH HOH A . E 5 HOH 322 582 195 HOH HOH A . E 5 HOH 323 583 196 HOH HOH A . E 5 HOH 324 584 197 HOH HOH A . E 5 HOH 325 585 198 HOH HOH A . E 5 HOH 326 586 199 HOH HOH A . E 5 HOH 327 587 200 HOH HOH A . E 5 HOH 328 588 201 HOH HOH A . E 5 HOH 329 589 202 HOH HOH A . E 5 HOH 330 590 203 HOH HOH A . E 5 HOH 331 591 204 HOH HOH A . E 5 HOH 332 592 205 HOH HOH A . E 5 HOH 333 593 206 HOH HOH A . E 5 HOH 334 594 207 HOH HOH A . E 5 HOH 335 595 208 HOH HOH A . E 5 HOH 336 596 209 HOH HOH A . E 5 HOH 337 597 210 HOH HOH A . E 5 HOH 338 598 211 HOH HOH A . E 5 HOH 339 599 212 HOH HOH A . E 5 HOH 340 600 213 HOH HOH A . E 5 HOH 341 601 214 HOH HOH A . E 5 HOH 342 602 215 HOH HOH A . E 5 HOH 343 603 216 HOH HOH A . E 5 HOH 344 604 217 HOH HOH A . E 5 HOH 345 605 218 HOH HOH A . E 5 HOH 346 606 219 HOH HOH A . E 5 HOH 347 607 220 HOH HOH A . E 5 HOH 348 608 221 HOH HOH A . E 5 HOH 349 609 222 HOH HOH A . E 5 HOH 350 610 223 HOH HOH A . E 5 HOH 351 611 224 HOH HOH A . E 5 HOH 352 612 225 HOH HOH A . E 5 HOH 353 613 226 HOH HOH A . E 5 HOH 354 614 227 HOH HOH A . E 5 HOH 355 615 228 HOH HOH A . E 5 HOH 356 616 229 HOH HOH A . E 5 HOH 357 617 230 HOH HOH A . E 5 HOH 358 618 231 HOH HOH A . E 5 HOH 359 619 232 HOH HOH A . E 5 HOH 360 620 233 HOH HOH A . E 5 HOH 361 621 234 HOH HOH A . E 5 HOH 362 622 235 HOH HOH A . E 5 HOH 363 623 236 HOH HOH A . E 5 HOH 364 624 237 HOH HOH A . E 5 HOH 365 625 238 HOH HOH A . E 5 HOH 366 626 239 HOH HOH A . E 5 HOH 367 627 240 HOH HOH A . E 5 HOH 368 628 241 HOH HOH A . E 5 HOH 369 629 242 HOH HOH A . E 5 HOH 370 630 243 HOH HOH A . E 5 HOH 371 631 244 HOH HOH A . E 5 HOH 372 632 245 HOH HOH A . E 5 HOH 373 633 246 HOH HOH A . E 5 HOH 374 634 247 HOH HOH A . E 5 HOH 375 635 248 HOH HOH A . E 5 HOH 376 636 249 HOH HOH A . E 5 HOH 377 637 250 HOH HOH A . E 5 HOH 378 638 251 HOH HOH A . E 5 HOH 379 639 252 HOH HOH A . E 5 HOH 380 640 253 HOH HOH A . E 5 HOH 381 641 254 HOH HOH A . E 5 HOH 382 642 255 HOH HOH A . E 5 HOH 383 643 256 HOH HOH A . E 5 HOH 384 644 257 HOH HOH A . E 5 HOH 385 645 258 HOH HOH A . E 5 HOH 386 646 259 HOH HOH A . E 5 HOH 387 647 260 HOH HOH A . E 5 HOH 388 648 261 HOH HOH A . E 5 HOH 389 649 262 HOH HOH A . E 5 HOH 390 650 263 HOH HOH A . E 5 HOH 391 651 264 HOH HOH A . E 5 HOH 392 652 265 HOH HOH A . E 5 HOH 393 653 266 HOH HOH A . E 5 HOH 394 654 267 HOH HOH A . E 5 HOH 395 655 268 HOH HOH A . E 5 HOH 396 656 269 HOH HOH A . E 5 HOH 397 657 270 HOH HOH A . E 5 HOH 398 658 271 HOH HOH A . E 5 HOH 399 659 272 HOH HOH A . E 5 HOH 400 660 273 HOH HOH A . E 5 HOH 401 661 274 HOH HOH A . E 5 HOH 402 662 275 HOH HOH A . E 5 HOH 403 663 276 HOH HOH A . E 5 HOH 404 664 277 HOH HOH A . E 5 HOH 405 665 278 HOH HOH A . E 5 HOH 406 666 279 HOH HOH A . E 5 HOH 407 667 280 HOH HOH A . E 5 HOH 408 668 281 HOH HOH A . E 5 HOH 409 669 282 HOH HOH A . E 5 HOH 410 670 283 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 22 A MSE 48 ? MET SELENOMETHIONINE 2 A MSE 85 A MSE 111 ? MET SELENOMETHIONINE 3 A MSE 160 A MSE 186 ? MET SELENOMETHIONINE 4 A MSE 188 A MSE 214 ? MET SELENOMETHIONINE 5 A MSE 218 A MSE 244 ? MET SELENOMETHIONINE 6 A MSE 219 A MSE 245 ? MET SELENOMETHIONINE 7 A MSE 227 A MSE 253 ? MET SELENOMETHIONINE 8 A MSE 236 A MSE 262 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4440 ? 1 MORE 1 ? 1 'SSA (A^2)' 20330 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_555 -x,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 47.7425000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 453 ? E HOH . 2 1 A HOH 485 ? E HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-02-23 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2019-07-17 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Author supporting evidence' 4 3 'Structure model' 'Refinement description' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' 8 5 'Structure model' 'Database references' 9 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_struct_assembly_auth_evidence 2 3 'Structure model' software 3 4 'Structure model' software 4 4 'Structure model' struct_conn 5 5 'Structure model' database_2 6 5 'Structure model' struct_ref_seq_dif 7 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 3.5587 26.9606 39.5202 -0.0304 -0.0056 -0.0059 -0.0085 -0.0015 -0.0009 0.2581 0.5870 0.5163 0.1783 0.3599 0.1671 0.0247 -0.0108 -0.0139 -0.0473 -0.0205 0.0374 -0.0035 0.0412 -0.0497 'X-RAY DIFFRACTION' 2 ? refined 18.0798 18.1196 37.2050 -0.0124 -0.0119 -0.0001 0.0114 -0.0135 0.0000 0.4398 0.0662 0.6736 -0.1058 0.4515 -0.0606 0.0496 -0.0045 -0.0451 0.0247 -0.0430 -0.0266 0.0032 0.0837 0.0854 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 33 A 103 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 A 104 A 283 ? . . . . ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0019 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SOLVE . ? program 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 5 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? 7 # _pdbx_entry_details.entry_id 3LMZ _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT (RESIDUES 28-283) WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 264 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -156.02 _pdbx_validate_torsion.psi 67.08 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 165 ? CD ? A LYS 139 CD 2 1 Y 1 A LYS 165 ? CE ? A LYS 139 CE 3 1 Y 1 A LYS 165 ? NZ ? A LYS 139 NZ 4 1 Y 1 A LYS 235 ? CE ? A LYS 209 CE 5 1 Y 1 A LYS 235 ? NZ ? A LYS 209 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A ALA 28 ? A ALA 2 3 1 Y 1 A LEU 29 ? A LEU 3 4 1 Y 1 A PRO 30 ? A PRO 4 5 1 Y 1 A ASP 31 ? A ASP 5 6 1 Y 1 A PRO 32 ? A PRO 6 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CITRIC ACID' CIT 3 'DI(HYDROXYETHYL)ETHER' PEG 4 'TRIETHYLENE GLYCOL' PGE 5 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'light scattering' _pdbx_struct_assembly_auth_evidence.details ? #