HEADER LIGASE 02-FEB-10 3LN6 TITLE CRYSTAL STRUCTURE OF A BIFUNCTIONAL GLUTATHIONE SYNTHETASE FROM TITLE 2 STREPTOCOCCUS AGALACTIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTATHIONE BIOSYNTHESIS BIFUNCTIONAL PROTEIN GSHAB; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GAMMA-GCS-GS, GCS-GS, GLUTAMATE-CYSTEINE LIGASE, GAMMA- COMPND 5 GLUTAMYLCYSTEINE SYNTHETASE, GAMMA-ECS, GCS, GLUTATHIONE SYNTHETASE, COMPND 6 GLUTATHIONE SYNTHASE, GSH SYNTHETASE, GSH-S, GSHASE, GS; COMPND 7 EC: 6.3.2.2, 6.3.2.3; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS AGALACTIAE SEROGROUP V; SOURCE 3 ORGANISM_TAXID: 216466; SOURCE 4 STRAIN: BAA-811; SOURCE 5 GENE: GSHAB, GSHF, SAG1821; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET11A KEYWDS GAMMA-GLUTAMYL CYSTEINE LIGASE DOMAIN, ATP-GRASP DOMAIN, HYBRID KEYWDS 2 ENZYME, ATP-BINDING, GLUTATHIONE BIOSYNTHESIS, LIGASE, MAGNESIUM, KEYWDS 3 MANGANESE, METAL-BINDING, MULTIFUNCTIONAL ENZYME, NUCLEOTIDE-BINDING EXPDTA X-RAY DIFFRACTION AUTHOR J.STOUT,B.VERGAUWEN,S.N.SAVVIDES REVDAT 2 01-NOV-23 3LN6 1 REMARK REVDAT 1 13-APR-11 3LN6 0 JRNL AUTH J.STOUT,D.DE VOS,B.VERGAUWEN,S.N.SAVVIDES JRNL TITL STRUCTURES OF TWO BIFUNCTIONAL GAMMA-GLUTAMATE-CYSTEINE JRNL TITL 2 LIGASE/GLUTATHIONE SYNTHETASES (GSHF) REVEAL A NOVEL HYBRID JRNL TITL 3 ATP-GRASP FOLD JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 23309 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.253 REMARK 3 FREE R VALUE : 0.286 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1178 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 4.6700 - 4.0800 0.01 0 145 0.2070 0.2600 REMARK 3 2 4.0800 - 3.7100 0.01 0 148 0.2470 0.3160 REMARK 3 3 3.7100 - 3.4500 0.01 0 142 0.2740 0.2730 REMARK 3 4 3.4500 - 3.2500 0.01 0 142 0.3000 0.3550 REMARK 3 5 3.2500 - 3.0800 0.01 0 145 0.3220 0.4180 REMARK 3 6 3.0800 - 2.9500 0.01 0 153 0.3530 0.4280 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 76.73 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 95.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.03000 REMARK 3 B22 (A**2) : -1.03000 REMARK 3 B33 (A**2) : 2.07000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 NULL REMARK 3 ANGLE : 1.512 NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: MLHL MAXIMUM LIKELIHOOD REFINEMENT REMARK 3 PROCEDURE REMARK 4 REMARK 4 3LN6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-FEB-10. REMARK 100 THE DEPOSITION ID IS D_1000057484. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-FEB-07; 12-JUL-08 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG; ESRF REMARK 200 BEAMLINE : BW7A; ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0720; 0.9330 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM; ADSC QUANTUM REMARK 200 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24531 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 8.400 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.98 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.1 REMARK 200 DATA REDUNDANCY IN SHELL : 8.10 REMARK 200 R MERGE FOR SHELL (I) : 0.13200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIRAS, MR REMARK 200 SOFTWARE USED: SOLVE 2.13, MOLREP, PHASER REMARK 200 STARTING MODEL: 1V4G, 1UC8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.97 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6M (NH4)2SO4, 100MM TRIS-HCL PH 8.5, REMARK 280 12% GLYCEROL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 -X+1/2,Y,-Z+3/4 REMARK 290 6555 X,-Y+1/2,-Z+1/4 REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X,-Y,Z REMARK 290 11555 -Y+1/2,X,Z+3/4 REMARK 290 12555 Y,-X+1/2,Z+1/4 REMARK 290 13555 -X,Y+1/2,-Z+1/4 REMARK 290 14555 X+1/2,-Y,-Z+3/4 REMARK 290 15555 Y,X,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 71.51000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 71.51000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 105.61500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 71.51000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 52.80750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 71.51000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 158.42250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 71.51000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 158.42250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 71.51000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 52.80750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 71.51000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 71.51000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 105.61500 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 71.51000 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 71.51000 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 105.61500 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 71.51000 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 158.42250 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 71.51000 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 52.80750 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 71.51000 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 52.80750 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 71.51000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 158.42250 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 71.51000 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 71.51000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 105.61500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 61850 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 143.02000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 785 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ILE A 2 REMARK 465 ILE A 3 REMARK 465 LEU A 250 REMARK 465 ILE A 251 REMARK 465 SER A 314 REMARK 465 SER A 315 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 9 CD NE CZ NH1 NH2 REMARK 470 HIS A 13 CG ND1 CD2 CE1 NE2 REMARK 470 ILE A 16 CD1 REMARK 470 ILE A 30 CD1 REMARK 470 GLN A 35 CG CD OE1 NE2 REMARK 470 ARG A 36 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 37 CG1 CG2 REMARK 470 THR A 40 OG1 CG2 REMARK 470 LYS A 44 CG CD CE NZ REMARK 470 TYR A 59 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ILE A 67 CD1 REMARK 470 ILE A 70 CD1 REMARK 470 VAL A 107 CG1 CG2 REMARK 470 ARG A 108 NE CZ NH1 NH2 REMARK 470 GLU A 109 CG CD OE1 OE2 REMARK 470 GLU A 110 CG CD OE1 OE2 REMARK 470 ASP A 111 CG OD1 OD2 REMARK 470 ILE A 112 CD1 REMARK 470 ILE A 114 CG1 CG2 CD1 REMARK 470 LEU A 117 CG CD1 CD2 REMARK 470 PHE A 121 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 122 CG CD OE1 OE2 REMARK 470 TYR A 123 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASP A 124 CG OD1 OD2 REMARK 470 TYR A 125 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG A 126 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 127 CG CD CE NZ REMARK 470 TYR A 128 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU A 130 CG CD OE1 OE2 REMARK 470 LYS A 131 CG CD CE NZ REMARK 470 THR A 132 OG1 CG2 REMARK 470 LYS A 135 CG CD CE NZ REMARK 470 LEU A 136 CG CD1 CD2 REMARK 470 ILE A 137 CD1 REMARK 470 ILE A 140 CD1 REMARK 470 GLU A 152 CD OE1 OE2 REMARK 470 LEU A 160 CG CD1 CD2 REMARK 470 ILE A 167 CD1 REMARK 470 ASP A 168 CG OD1 OD2 REMARK 470 LYS A 176 CD CE NZ REMARK 470 ARG A 183 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 202 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP A 204 CG OD1 OD2 REMARK 470 GLN A 205 CD OE1 NE2 REMARK 470 LYS A 206 CG CD CE NZ REMARK 470 LEU A 207 CG CD1 CD2 REMARK 470 VAL A 211 CG1 CG2 REMARK 470 LEU A 214 CG CD1 CD2 REMARK 470 SER A 217 OG REMARK 470 VAL A 222 CG1 CG2 REMARK 470 ASN A 223 CG OD1 ND2 REMARK 470 HIS A 224 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 225 CG CD CE NZ REMARK 470 ASP A 226 CG OD1 OD2 REMARK 470 ILE A 227 CD1 REMARK 470 ARG A 228 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 229 CD1 REMARK 470 SER A 230 OG REMARK 470 TYR A 231 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU A 234 CG CD1 CD2 REMARK 470 LYS A 235 CG CD CE NZ REMARK 470 VAL A 238 CG1 CG2 REMARK 470 ASN A 239 CG OD1 ND2 REMARK 470 LEU A 241 CG CD1 CD2 REMARK 470 ASN A 243 CG OD1 ND2 REMARK 470 LYS A 246 CE NZ REMARK 470 SER A 247 OG REMARK 470 GLU A 253 CG CD OE1 OE2 REMARK 470 LYS A 254 CG CD CE NZ REMARK 470 GLU A 255 CG CD OE1 OE2 REMARK 470 ARG A 261 NE CZ NH1 NH2 REMARK 470 ARG A 269 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 270 CG OD1 ND2 REMARK 470 TYR A 271 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU A 272 CG CD1 CD2 REMARK 470 GLU A 273 CG CD OE1 OE2 REMARK 470 LYS A 274 CG CD CE NZ REMARK 470 ILE A 276 CD1 REMARK 470 ILE A 292 CD1 REMARK 470 LEU A 304 CG CD1 CD2 REMARK 470 ILE A 312 CG1 CG2 CD1 REMARK 470 ASP A 313 CG OD1 OD2 REMARK 470 SER A 316 OG REMARK 470 ILE A 318 CG1 CG2 CD1 REMARK 470 ASP A 319 CG OD1 OD2 REMARK 470 GLN A 320 CG CD OE1 NE2 REMARK 470 ASP A 321 CG OD1 OD2 REMARK 470 ILE A 322 CG1 CG2 CD1 REMARK 470 LYS A 323 CG CD CE NZ REMARK 470 GLU A 324 CG CD OE1 OE2 REMARK 470 ARG A 327 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 331 CG CD1 CD2 REMARK 470 ILE A 332 CG1 CG2 CD1 REMARK 470 SER A 335 OG REMARK 470 LEU A 338 CG CD1 CD2 REMARK 470 GLU A 339 CG CD OE1 OE2 REMARK 470 LEU A 341 CG CD1 CD2 REMARK 470 GLN A 359 CG CD OE1 NE2 REMARK 470 ASN A 362 CG OD1 ND2 REMARK 470 SER A 364 OG REMARK 470 ARG A 376 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 378 CG1 CG2 CD1 REMARK 470 GLU A 382 CG CD OE1 OE2 REMARK 470 MET A 392 SD CE REMARK 470 ILE A 393 CD1 REMARK 470 LEU A 396 CG CD1 CD2 REMARK 470 LYS A 440 CD CE NZ REMARK 470 VAL A 446 CG1 CG2 REMARK 470 GLN A 450 CD OE1 NE2 REMARK 470 SER A 460 OG REMARK 470 ILE A 462 CD1 REMARK 470 LYS A 473 CD CE NZ REMARK 470 ILE A 477 CD1 REMARK 470 LYS A 485 CG CD CE NZ REMARK 470 ILE A 491 CG1 CG2 CD1 REMARK 470 PHE A 505 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP A 507 CG OD1 OD2 REMARK 470 ARG A 508 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 509 CE NZ REMARK 470 ASN A 513 CG OD1 ND2 REMARK 470 PHE A 515 CD1 CD2 CE1 CE2 CZ REMARK 470 GLN A 517 CD OE1 NE2 REMARK 470 ILE A 518 CG1 CG2 CD1 REMARK 470 GLN A 519 CG CD OE1 NE2 REMARK 470 LYS A 521 NZ REMARK 470 ILE A 523 CD1 REMARK 470 LYS A 526 CE NZ REMARK 470 LYS A 528 CG CD CE NZ REMARK 470 SER A 529 OG REMARK 470 THR A 530 OG1 CG2 REMARK 470 ASN A 531 CG OD1 ND2 REMARK 470 LEU A 534 CG CD1 CD2 REMARK 470 ILE A 536 CG1 CG2 CD1 REMARK 470 ILE A 538 CD1 REMARK 470 PHE A 539 CD1 CD2 CE1 CE2 CZ REMARK 470 ASN A 544 CG OD1 ND2 REMARK 470 LEU A 545 CG CD1 CD2 REMARK 470 GLU A 549 CG CD OE1 OE2 REMARK 470 LYS A 550 CG CD CE NZ REMARK 470 ILE A 552 CD1 REMARK 470 ILE A 554 CD1 REMARK 470 THR A 557 OG1 CG2 REMARK 470 GLU A 558 CG CD OE1 OE2 REMARK 470 ILE A 562 CG1 CG2 CD1 REMARK 470 ILE A 583 CD1 REMARK 470 ASP A 596 CG OD1 OD2 REMARK 470 ILE A 598 CG1 CG2 CD1 REMARK 470 TYR A 616 CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASP A 617 CG OD1 OD2 REMARK 470 ILE A 625 CD1 REMARK 470 GLU A 629 CG CD OE1 OE2 REMARK 470 GLU A 648 CG CD OE1 OE2 REMARK 470 LYS A 651 CD CE NZ REMARK 470 ILE A 652 CD1 REMARK 470 ARG A 656 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 660 CD1 REMARK 470 ILE A 698 CD1 REMARK 470 SER A 707 OG REMARK 470 LYS A 708 CG CD CE NZ REMARK 470 ASP A 709 CG OD1 OD2 REMARK 470 LYS A 710 CG CD CE NZ REMARK 470 LYS A 711 CG CD CE NZ REMARK 470 ILE A 716 CD1 REMARK 470 MET A 726 SD CE REMARK 470 LEU A 750 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 693 CB CYS A 693 SG -0.125 REMARK 500 CYS A 730 CB CYS A 730 SG -0.099 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 288 C - N - CA ANGL. DEV. = 9.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 48 142.57 -37.17 REMARK 500 TYR A 59 -61.20 -138.46 REMARK 500 PRO A 69 176.27 -53.22 REMARK 500 ASN A 209 177.49 95.56 REMARK 500 ARG A 269 -21.66 92.08 REMARK 500 LEU A 286 137.86 -37.20 REMARK 500 ILE A 312 32.64 -80.56 REMARK 500 GLU A 449 -55.72 77.32 REMARK 500 ASN A 459 -127.99 63.42 REMARK 500 LYS A 485 -58.37 75.36 REMARK 500 GLN A 519 -65.86 -128.78 REMARK 500 ASN A 531 -154.10 -74.58 REMARK 500 GLU A 579 -125.05 48.98 REMARK 500 CYS A 693 163.17 -48.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 751 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3LN7 RELATED DB: PDB DBREF 3LN6 A 1 750 UNP Q8DXM9 GSHAB_STRA5 1 750 SEQRES 1 A 750 MET ILE ILE ASP ARG LEU LEU GLN ARG SER HIS SER HIS SEQRES 2 A 750 LEU PRO ILE LEU GLN ALA THR PHE GLY LEU GLU ARG GLU SEQRES 3 A 750 SER LEU ARG ILE HIS GLN PRO THR GLN ARG VAL ALA GLN SEQRES 4 A 750 THR PRO HIS PRO LYS THR LEU GLY SER ARG ASN TYR HIS SEQRES 5 A 750 PRO TYR ILE GLN THR ASP TYR SER GLU PRO GLN LEU GLU SEQRES 6 A 750 LEU ILE THR PRO ILE ALA LYS ASP SER GLN GLU ALA ILE SEQRES 7 A 750 ARG PHE LEU LYS ALA ILE SER ASP VAL ALA GLY ARG SER SEQRES 8 A 750 ILE ASN HIS ASP GLU TYR LEU TRP PRO LEU SER MET PRO SEQRES 9 A 750 PRO LYS VAL ARG GLU GLU ASP ILE GLN ILE ALA GLN LEU SEQRES 10 A 750 GLU ASP ALA PHE GLU TYR ASP TYR ARG LYS TYR LEU GLU SEQRES 11 A 750 LYS THR TYR GLY LYS LEU ILE GLN SER ILE SER GLY ILE SEQRES 12 A 750 HIS TYR ASN LEU GLY LEU GLY GLN GLU LEU LEU THR SER SEQRES 13 A 750 LEU PHE GLU LEU SER GLN ALA ASP ASN ALA ILE ASP PHE SEQRES 14 A 750 GLN ASN GLN LEU TYR MET LYS LEU SER GLN ASN PHE LEU SEQRES 15 A 750 ARG TYR ARG TRP LEU LEU THR TYR LEU TYR GLY ALA SER SEQRES 16 A 750 PRO VAL ALA GLU GLU ASP PHE LEU ASP GLN LYS LEU ASN SEQRES 17 A 750 ASN PRO VAL ARG SER LEU ARG ASN SER HIS LEU GLY TYR SEQRES 18 A 750 VAL ASN HIS LYS ASP ILE ARG ILE SER TYR THR SER LEU SEQRES 19 A 750 LYS ASP TYR VAL ASN ASP LEU GLU ASN ALA VAL LYS SER SEQRES 20 A 750 GLY GLN LEU ILE ALA GLU LYS GLU PHE TYR SER PRO VAL SEQRES 21 A 750 ARG LEU ARG GLY SER LYS ALA CYS ARG ASN TYR LEU GLU SEQRES 22 A 750 LYS GLY ILE THR TYR LEU GLU PHE ARG THR PHE ASP LEU SEQRES 23 A 750 ASN PRO PHE SER PRO ILE GLY ILE THR GLN GLU THR VAL SEQRES 24 A 750 ASP THR VAL HIS LEU PHE LEU LEU ALA LEU LEU TRP ILE SEQRES 25 A 750 ASP SER SER SER HIS ILE ASP GLN ASP ILE LYS GLU ALA SEQRES 26 A 750 ASN ARG LEU ASN ASP LEU ILE ALA LEU SER HIS PRO LEU SEQRES 27 A 750 GLU LYS LEU PRO ASN GLN ALA PRO VAL SER ASP LEU VAL SEQRES 28 A 750 ASP ALA MET GLN SER VAL ILE GLN HIS PHE ASN LEU SER SEQRES 29 A 750 PRO TYR TYR GLN ASP LEU LEU GLU SER VAL LYS ARG GLN SEQRES 30 A 750 ILE GLN SER PRO GLU LEU THR VAL ALA GLY GLN LEU LEU SEQRES 31 A 750 GLU MET ILE GLU GLY LEU SER LEU GLU THR PHE GLY GLN SEQRES 32 A 750 ARG GLN GLY GLN ILE TYR HIS ASP TYR ALA TRP GLU ALA SEQRES 33 A 750 PRO TYR ALA LEU LYS GLY TYR GLU THR MET GLU LEU SER SEQRES 34 A 750 THR GLN LEU LEU LEU PHE ASP VAL ILE GLN LYS GLY VAL SEQRES 35 A 750 ASN PHE GLU VAL LEU ASP GLU GLN ASP GLN PHE LEU LYS SEQRES 36 A 750 LEU TRP HIS ASN SER HIS ILE GLU TYR VAL LYS ASN GLY SEQRES 37 A 750 ASN MET THR SER LYS ASP ASN TYR ILE VAL PRO LEU ALA SEQRES 38 A 750 MET ALA ASN LYS VAL VAL THR LYS LYS ILE LEU ASP GLU SEQRES 39 A 750 LYS HIS PHE PRO THR PRO PHE GLY ASP GLU PHE THR ASP SEQRES 40 A 750 ARG LYS GLU ALA LEU ASN TYR PHE SER GLN ILE GLN ASP SEQRES 41 A 750 LYS PRO ILE VAL VAL LYS PRO LYS SER THR ASN PHE GLY SEQRES 42 A 750 LEU GLY ILE SER ILE PHE LYS THR SER ALA ASN LEU ALA SEQRES 43 A 750 SER TYR GLU LYS ALA ILE ASP ILE ALA PHE THR GLU ASP SEQRES 44 A 750 SER ALA ILE LEU VAL GLU GLU TYR ILE GLU GLY THR GLU SEQRES 45 A 750 TYR ARG PHE PHE VAL LEU GLU GLY ASP CYS ILE ALA VAL SEQRES 46 A 750 LEU LEU ARG VAL ALA ALA ASN VAL VAL GLY ASP GLY ILE SEQRES 47 A 750 HIS THR ILE SER GLN LEU VAL LYS LEU LYS ASN GLN ASN SEQRES 48 A 750 PRO LEU ARG GLY TYR ASP HIS ARG SER PRO LEU GLU VAL SEQRES 49 A 750 ILE GLU LEU GLY GLU VAL GLU GLN LEU MET LEU GLU GLN SEQRES 50 A 750 GLN GLY TYR THR VAL ASN SER ILE PRO PRO GLU GLY THR SEQRES 51 A 750 LYS ILE GLU LEU ARG ARG ASN SER ASN ILE SER THR GLY SEQRES 52 A 750 GLY ASP SER ILE ASP VAL THR ASN THR MET ASP PRO THR SEQRES 53 A 750 TYR LYS GLN LEU ALA ALA GLU MET ALA GLU ALA MET GLY SEQRES 54 A 750 ALA TRP VAL CYS GLY VAL ASP LEU ILE ILE PRO ASN ALA SEQRES 55 A 750 THR GLN ALA TYR SER LYS ASP LYS LYS ASN ALA THR CYS SEQRES 56 A 750 ILE GLU LEU ASN PHE ASN PRO LEU MET TYR MET HIS THR SEQRES 57 A 750 TYR CYS GLN GLU GLY PRO GLY GLN SER ILE THR PRO ARG SEQRES 58 A 750 ILE LEU ALA LYS LEU PHE PRO GLU LEU HET SO4 A 751 5 HETNAM SO4 SULFATE ION FORMUL 2 SO4 O4 S 2- FORMUL 3 HOH *35(H2 O) HELIX 1 1 LEU A 6 SER A 10 5 5 HELIX 2 2 ASP A 73 ILE A 92 1 20 HELIX 3 3 ASP A 119 GLY A 134 1 16 HELIX 4 4 LYS A 135 ILE A 140 5 6 HELIX 5 5 GLY A 150 GLN A 162 1 13 HELIX 6 6 ASN A 165 TYR A 192 1 28 HELIX 7 7 SER A 233 ALA A 244 1 12 HELIX 8 8 ALA A 252 PHE A 256 5 5 HELIX 9 9 THR A 295 ILE A 312 1 18 HELIX 10 10 HIS A 317 SER A 335 1 19 HELIX 11 11 PRO A 346 ASN A 362 1 17 HELIX 12 12 SER A 364 SER A 380 1 17 HELIX 13 13 PRO A 381 LEU A 383 5 3 HELIX 14 14 THR A 384 ILE A 393 1 10 HELIX 15 15 LEU A 398 TRP A 414 1 17 HELIX 16 16 LEU A 420 GLU A 424 5 5 HELIX 17 17 GLU A 427 GLY A 441 1 15 HELIX 18 18 TYR A 476 MET A 482 1 7 HELIX 19 19 LYS A 485 LYS A 495 1 11 HELIX 20 20 GLU A 510 ILE A 518 1 9 HELIX 21 21 ASN A 544 ASP A 559 1 16 HELIX 22 22 THR A 600 ASN A 609 1 10 HELIX 23 23 GLY A 628 GLN A 638 1 11 HELIX 24 24 ASP A 674 MET A 688 1 15 HELIX 25 25 MET A 724 TYR A 729 1 6 HELIX 26 26 ILE A 738 PHE A 747 1 10 SHEET 1 A 3 ARG A 36 VAL A 37 0 SHEET 2 A 3 ALA A 19 HIS A 31 -1 N HIS A 31 O ARG A 36 SHEET 3 A 3 GLU A 96 LEU A 98 -1 O TYR A 97 N ILE A 30 SHEET 1 B 6 ILE A 55 THR A 57 0 SHEET 2 B 6 GLN A 63 ILE A 67 -1 O GLU A 65 N GLN A 56 SHEET 3 B 6 ALA A 19 HIS A 31 -1 N SER A 27 O LEU A 64 SHEET 4 B 6 ILE A 143 LEU A 149 -1 O GLY A 148 N THR A 20 SHEET 5 B 6 TYR A 278 PHE A 281 -1 O PHE A 281 N TYR A 145 SHEET 6 B 6 VAL A 260 ARG A 263 -1 N ARG A 261 O GLU A 280 SHEET 1 C 3 ASN A 443 VAL A 446 0 SHEET 2 C 3 PHE A 453 HIS A 458 -1 O LYS A 455 N GLU A 445 SHEET 3 C 3 HIS A 461 LYS A 466 -1 O GLU A 463 N LEU A 456 SHEET 1 D 4 PHE A 505 THR A 506 0 SHEET 2 D 4 ALA A 561 GLU A 566 -1 O ILE A 562 N PHE A 505 SHEET 3 D 4 ILE A 523 PRO A 527 -1 N LYS A 526 O LEU A 563 SHEET 4 D 4 SER A 537 PHE A 539 -1 O SER A 537 N VAL A 525 SHEET 1 E 5 ASP A 665 ASP A 668 0 SHEET 2 E 5 ASP A 581 VAL A 589 -1 N LEU A 587 O ILE A 667 SHEET 3 E 5 THR A 571 LEU A 578 -1 N ARG A 574 O LEU A 586 SHEET 4 E 5 GLY A 694 ILE A 699 -1 O VAL A 695 N PHE A 575 SHEET 5 E 5 THR A 714 ASN A 719 -1 O ASN A 719 N GLY A 694 SHEET 1 F 2 ASN A 592 VAL A 594 0 SHEET 2 F 2 LYS A 651 GLU A 653 -1 O ILE A 652 N VAL A 593 SHEET 1 G 2 ARG A 614 GLY A 615 0 SHEET 2 G 2 LEU A 622 GLU A 623 1 O LEU A 622 N GLY A 615 SITE 1 AC1 5 ARG A 588 ASN A 659 ILE A 660 SER A 661 SITE 2 AC1 5 HOH A 776 CRYST1 143.020 143.020 211.230 90.00 90.00 90.00 I 41 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006992 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006992 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004734 0.00000