data_3LQK # _entry.id 3LQK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3LQK RCSB RCSB057605 WWPDB D_1000057605 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC41279.0 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3LQK _pdbx_database_status.recvd_initial_deposition_date 2010-02-09 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nocek, B.' 1 'Kagan, O.' 2 'Savchenko, A.' 3 'Edwards, A.' 4 'Joachimiak, A.' 5 'Midwest Center for Structural Genomics (MCSG)' 6 # _citation.id primary _citation.title 'Crystal structure of dipicolinate synthase subunit B from Bacillus halodurans C' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Nocek, B.' 1 primary 'Kagan, O.' 2 primary 'Savchenko, A.' 3 primary 'Edwards, A.' 4 primary 'Joachimiak, A.' 5 # _cell.entry_id 3LQK _cell.length_a 110.185 _cell.length_b 110.185 _cell.length_c 71.350 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3LQK _symmetry.space_group_name_H-M 'P 63 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Dipicolinate synthase subunit B' 22396.221 1 ? ? ? ? 2 non-polymer syn 'PHOSPHATE ION' 94.971 2 ? ? ? ? 3 water nat water 18.015 84 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GH(MSE)NFAGKHVGFGLTGSHCTYHEVLPQ(MSE)ERLVELGAKVTPFVTHTVQTTDTKFGESSEWINKIKQITEEPIV DS(MSE)VKAEPFGPKTPLDC(MSE)VIAP(MSE)TGNSTSKFANA(MSE)TDSPVL(MSE)GAKATLRNGKPVVVGIST NDALGLNGINI(MSE)RL(MSE)ATKNIYFIPFGQDNPQVKPNSLVAR(MSE)EALPETIEAALRGQQYQPVLIEKFRDG S ; _entity_poly.pdbx_seq_one_letter_code_can ;GHMNFAGKHVGFGLTGSHCTYHEVLPQMERLVELGAKVTPFVTHTVQTTDTKFGESSEWINKIKQITEEPIVDSMVKAEP FGPKTPLDCMVIAPMTGNSTSKFANAMTDSPVLMGAKATLRNGKPVVVGISTNDALGLNGINIMRLMATKNIYFIPFGQD NPQVKPNSLVARMEALPETIEAALRGQQYQPVLIEKFRDGS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier APC41279.0 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 HIS n 1 3 MSE n 1 4 ASN n 1 5 PHE n 1 6 ALA n 1 7 GLY n 1 8 LYS n 1 9 HIS n 1 10 VAL n 1 11 GLY n 1 12 PHE n 1 13 GLY n 1 14 LEU n 1 15 THR n 1 16 GLY n 1 17 SER n 1 18 HIS n 1 19 CYS n 1 20 THR n 1 21 TYR n 1 22 HIS n 1 23 GLU n 1 24 VAL n 1 25 LEU n 1 26 PRO n 1 27 GLN n 1 28 MSE n 1 29 GLU n 1 30 ARG n 1 31 LEU n 1 32 VAL n 1 33 GLU n 1 34 LEU n 1 35 GLY n 1 36 ALA n 1 37 LYS n 1 38 VAL n 1 39 THR n 1 40 PRO n 1 41 PHE n 1 42 VAL n 1 43 THR n 1 44 HIS n 1 45 THR n 1 46 VAL n 1 47 GLN n 1 48 THR n 1 49 THR n 1 50 ASP n 1 51 THR n 1 52 LYS n 1 53 PHE n 1 54 GLY n 1 55 GLU n 1 56 SER n 1 57 SER n 1 58 GLU n 1 59 TRP n 1 60 ILE n 1 61 ASN n 1 62 LYS n 1 63 ILE n 1 64 LYS n 1 65 GLN n 1 66 ILE n 1 67 THR n 1 68 GLU n 1 69 GLU n 1 70 PRO n 1 71 ILE n 1 72 VAL n 1 73 ASP n 1 74 SER n 1 75 MSE n 1 76 VAL n 1 77 LYS n 1 78 ALA n 1 79 GLU n 1 80 PRO n 1 81 PHE n 1 82 GLY n 1 83 PRO n 1 84 LYS n 1 85 THR n 1 86 PRO n 1 87 LEU n 1 88 ASP n 1 89 CYS n 1 90 MSE n 1 91 VAL n 1 92 ILE n 1 93 ALA n 1 94 PRO n 1 95 MSE n 1 96 THR n 1 97 GLY n 1 98 ASN n 1 99 SER n 1 100 THR n 1 101 SER n 1 102 LYS n 1 103 PHE n 1 104 ALA n 1 105 ASN n 1 106 ALA n 1 107 MSE n 1 108 THR n 1 109 ASP n 1 110 SER n 1 111 PRO n 1 112 VAL n 1 113 LEU n 1 114 MSE n 1 115 GLY n 1 116 ALA n 1 117 LYS n 1 118 ALA n 1 119 THR n 1 120 LEU n 1 121 ARG n 1 122 ASN n 1 123 GLY n 1 124 LYS n 1 125 PRO n 1 126 VAL n 1 127 VAL n 1 128 VAL n 1 129 GLY n 1 130 ILE n 1 131 SER n 1 132 THR n 1 133 ASN n 1 134 ASP n 1 135 ALA n 1 136 LEU n 1 137 GLY n 1 138 LEU n 1 139 ASN n 1 140 GLY n 1 141 ILE n 1 142 ASN n 1 143 ILE n 1 144 MSE n 1 145 ARG n 1 146 LEU n 1 147 MSE n 1 148 ALA n 1 149 THR n 1 150 LYS n 1 151 ASN n 1 152 ILE n 1 153 TYR n 1 154 PHE n 1 155 ILE n 1 156 PRO n 1 157 PHE n 1 158 GLY n 1 159 GLN n 1 160 ASP n 1 161 ASN n 1 162 PRO n 1 163 GLN n 1 164 VAL n 1 165 LYS n 1 166 PRO n 1 167 ASN n 1 168 SER n 1 169 LEU n 1 170 VAL n 1 171 ALA n 1 172 ARG n 1 173 MSE n 1 174 GLU n 1 175 ALA n 1 176 LEU n 1 177 PRO n 1 178 GLU n 1 179 THR n 1 180 ILE n 1 181 GLU n 1 182 ALA n 1 183 ALA n 1 184 LEU n 1 185 ARG n 1 186 GLY n 1 187 GLN n 1 188 GLN n 1 189 TYR n 1 190 GLN n 1 191 PRO n 1 192 VAL n 1 193 LEU n 1 194 ILE n 1 195 GLU n 1 196 LYS n 1 197 PHE n 1 198 ARG n 1 199 ASP n 1 200 GLY n 1 201 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'spoVFB, BH2402' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain C-125 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus halodurans' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 86665 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain Bl21DE3 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector peT15b _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9KA88_BACHD _struct_ref.pdbx_db_accession Q9KA88 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MNFAGKHVGFGLTGSHCTYHEVLPQMERLVELGAKVTPFVTHTVQTTDTKFGESSEWINKIKQITEEPIVDSMVKAEPFG PKTPLDCMVIAPMTGNSTSKFANAMTDSPVLMGAKATLRNGKPVVVGISTNDALGLNGINIMRLMATKNIYFIPFGQDNP QVKPNSLVARMEALPETIEAALRGQQYQPVLIEKFRD ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3LQK _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 199 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9KA88 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 197 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 197 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3LQK GLY A 1 ? UNP Q9KA88 ? ? 'EXPRESSION TAG' -1 1 1 3LQK HIS A 2 ? UNP Q9KA88 ? ? 'EXPRESSION TAG' 0 2 1 3LQK GLY A 200 ? UNP Q9KA88 ? ? 'EXPRESSION TAG' 198 3 1 3LQK SER A 201 ? UNP Q9KA88 ? ? 'EXPRESSION TAG' 199 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3LQK _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.79 _exptl_crystal.density_percent_sol 55.93 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '0.1 M Tris, 0.3 M 195NSBD, 2.0 M Ammonium dihydrogen phosphate, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2010-02-04 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9794 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9794 # _reflns.entry_id 3LQK _reflns.observed_criterion_sigma_I 2 _reflns.observed_criterion_sigma_F 2 _reflns.d_resolution_low 40 _reflns.d_resolution_high 2.10 _reflns.number_obs 14994 _reflns.number_all 15060 _reflns.percent_possible_obs 96.8 _reflns.pdbx_Rmerge_I_obs 0.11 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 20.5 _reflns.B_iso_Wilson_estimate 40 _reflns.pdbx_redundancy 5.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.1 _reflns_shell.d_res_low 2.14 _reflns_shell.percent_possible_all 99.7 _reflns_shell.Rmerge_I_obs 0.64 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.8 _reflns_shell.pdbx_redundancy 5.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 742 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3LQK _refine.ls_number_reflns_obs 14181 _refine.ls_number_reflns_all 14930 _refine.pdbx_ls_sigma_I 2.0 _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40.00 _refine.ls_d_res_high 2.10 _refine.ls_percent_reflns_obs 96.88 _refine.ls_R_factor_obs 0.16882 _refine.ls_R_factor_all 0.1700 _refine.ls_R_factor_R_work 0.16658 _refine.ls_R_factor_R_free 0.21296 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 749 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.962 _refine.correlation_coeff_Fo_to_Fc_free 0.946 _refine.B_iso_mean 15.038 _refine.aniso_B[1][1] 0.21 _refine.aniso_B[2][2] 0.21 _refine.aniso_B[3][3] -0.31 _refine.aniso_B[1][2] 0.10 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.160 _refine.pdbx_overall_ESU_R_Free 0.153 _refine.overall_SU_ML 0.096 _refine.overall_SU_B 7.987 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1460 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 84 _refine_hist.number_atoms_total 1554 _refine_hist.d_res_high 2.10 _refine_hist.d_res_low 40.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.023 0.022 ? 1511 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 997 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.781 1.975 ? 2058 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.077 3.000 ? 2471 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.421 5.000 ? 198 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.549 25.273 ? 55 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.202 15.000 ? 256 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 19.912 15.000 ? 5 'X-RAY DIFFRACTION' ? r_chiral_restr 0.123 0.200 ? 241 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.009 0.021 ? 1660 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 264 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.094 1.500 ? 979 'X-RAY DIFFRACTION' ? r_mcbond_other 0.301 1.500 ? 392 'X-RAY DIFFRACTION' ? r_mcangle_it 2.021 2.000 ? 1589 'X-RAY DIFFRACTION' ? r_scbond_it 3.245 3.000 ? 532 'X-RAY DIFFRACTION' ? r_scangle_it 5.541 4.500 ? 467 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.100 _refine_ls_shell.d_res_low 2.154 _refine_ls_shell.number_reflns_R_work 1029 _refine_ls_shell.R_factor_R_work 0.194 _refine_ls_shell.percent_reflns_obs 99.00 _refine_ls_shell.R_factor_R_free 0.275 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 60 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3LQK _struct.title 'Crystal structure of dipicolinate synthase subunit B from Bacillus halodurans C' _struct.pdbx_descriptor 'Dipicolinate synthase subunit B' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3LQK _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text ;dipicolinate synthase, Flavoprotein, PSI2, MCSG, Structural Genomics, Protein Structure Initiative, Midwest Center for Structural Genomics, OXIDOREDUCTASE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 17 ? GLU A 23 ? SER A 15 GLU A 21 5 ? 7 HELX_P HELX_P2 2 VAL A 24 ? LEU A 34 ? VAL A 22 LEU A 32 1 ? 11 HELX_P HELX_P3 3 SER A 57 ? THR A 67 ? SER A 55 THR A 65 1 ? 11 HELX_P HELX_P4 4 SER A 74 ? GLU A 79 ? SER A 72 GLU A 77 1 ? 6 HELX_P HELX_P5 5 PRO A 80 ? GLY A 82 ? PRO A 78 GLY A 80 5 ? 3 HELX_P HELX_P6 6 THR A 96 ? ASN A 105 ? THR A 94 ASN A 103 1 ? 10 HELX_P HELX_P7 7 SER A 110 ? ASN A 122 ? SER A 108 ASN A 120 1 ? 13 HELX_P HELX_P8 8 ASN A 139 ? ALA A 148 ? ASN A 137 ALA A 146 1 ? 10 HELX_P HELX_P9 9 ALA A 175 ? ARG A 185 ? ALA A 173 ARG A 183 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A MSE 3 C ? ? ? 1_555 A ASN 4 N ? ? A MSE 1 A ASN 2 1_555 ? ? ? ? ? ? ? 1.324 ? covale2 covale ? ? A GLN 27 C ? ? ? 1_555 A MSE 28 N ? ? A GLN 25 A MSE 26 1_555 ? ? ? ? ? ? ? 1.339 ? covale3 covale ? ? A MSE 28 C ? ? ? 1_555 A GLU 29 N ? ? A MSE 26 A GLU 27 1_555 ? ? ? ? ? ? ? 1.323 ? covale4 covale ? ? A SER 74 C ? ? ? 1_555 A MSE 75 N ? ? A SER 72 A MSE 73 1_555 ? ? ? ? ? ? ? 1.332 ? covale5 covale ? ? A MSE 75 C ? ? ? 1_555 A VAL 76 N ? ? A MSE 73 A VAL 74 1_555 ? ? ? ? ? ? ? 1.331 ? covale6 covale ? ? A CYS 89 C ? ? ? 1_555 A MSE 90 N ? ? A CYS 87 A MSE 88 1_555 ? ? ? ? ? ? ? 1.317 ? covale7 covale ? ? A MSE 90 C ? ? ? 1_555 A VAL 91 N ? ? A MSE 88 A VAL 89 1_555 ? ? ? ? ? ? ? 1.323 ? covale8 covale ? ? A PRO 94 C ? ? ? 1_555 A MSE 95 N ? ? A PRO 92 A MSE 93 1_555 ? ? ? ? ? ? ? 1.344 ? covale9 covale ? ? A MSE 95 C ? ? ? 1_555 A THR 96 N ? ? A MSE 93 A THR 94 1_555 ? ? ? ? ? ? ? 1.336 ? covale10 covale ? ? A ALA 106 C ? ? ? 1_555 A MSE 107 N ? ? A ALA 104 A MSE 105 1_555 ? ? ? ? ? ? ? 1.320 ? covale11 covale ? ? A MSE 107 C ? ? ? 1_555 A THR 108 N ? ? A MSE 105 A THR 106 1_555 ? ? ? ? ? ? ? 1.284 ? covale12 covale ? ? A LEU 113 C ? ? ? 1_555 A MSE 114 N ? ? A LEU 111 A MSE 112 1_555 ? ? ? ? ? ? ? 1.333 ? covale13 covale ? ? A MSE 114 C ? ? ? 1_555 A GLY 115 N ? ? A MSE 112 A GLY 113 1_555 ? ? ? ? ? ? ? 1.354 ? covale14 covale ? ? A ILE 143 C ? ? ? 1_555 A MSE 144 N ? ? A ILE 141 A MSE 142 1_555 ? ? ? ? ? ? ? 1.324 ? covale15 covale ? ? A MSE 144 C ? ? ? 1_555 A ARG 145 N ? ? A MSE 142 A ARG 143 1_555 ? ? ? ? ? ? ? 1.312 ? covale16 covale ? ? A LEU 146 C ? ? ? 1_555 A MSE 147 N ? ? A LEU 144 A MSE 145 1_555 ? ? ? ? ? ? ? 1.330 ? covale17 covale ? ? A MSE 147 C ? ? ? 1_555 A ALA 148 N ? ? A MSE 145 A ALA 146 1_555 ? ? ? ? ? ? ? 1.352 ? covale18 covale ? ? A ARG 172 C ? ? ? 1_555 A MSE 173 N ? ? A ARG 170 A MSE 171 1_555 ? ? ? ? ? ? ? 1.325 ? covale19 covale ? ? A MSE 173 C ? ? ? 1_555 A GLU 174 N ? ? A MSE 171 A GLU 172 1_555 ? ? ? ? ? ? ? 1.328 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ALA 93 A . ? ALA 91 A PRO 94 A ? PRO 92 A 1 -6.00 2 GLN 190 A . ? GLN 188 A PRO 191 A ? PRO 189 A 1 -3.44 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 37 ? PHE A 41 ? LYS A 35 PHE A 39 A 2 HIS A 9 ? GLY A 13 ? HIS A 7 GLY A 11 A 3 CYS A 89 ? MSE A 95 ? CYS A 87 MSE A 93 A 4 VAL A 126 ? THR A 132 ? VAL A 124 THR A 130 A 5 ILE A 152 ? PHE A 154 ? ILE A 150 PHE A 152 B 1 LYS A 37 ? PHE A 41 ? LYS A 35 PHE A 39 B 2 HIS A 9 ? GLY A 13 ? HIS A 7 GLY A 11 B 3 CYS A 89 ? MSE A 95 ? CYS A 87 MSE A 93 B 4 VAL A 126 ? THR A 132 ? VAL A 124 THR A 130 B 5 LEU A 169 ? ALA A 171 ? LEU A 167 ALA A 169 B 6 PHE A 157 ? GLN A 159 ? PHE A 155 GLN A 157 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O THR A 39 ? O THR A 37 N PHE A 12 ? N PHE A 10 A 2 3 N GLY A 13 ? N GLY A 11 O VAL A 91 ? O VAL A 89 A 3 4 N MSE A 95 ? N MSE A 93 O GLY A 129 ? O GLY A 127 A 4 5 N VAL A 126 ? N VAL A 124 O TYR A 153 ? O TYR A 151 B 1 2 O THR A 39 ? O THR A 37 N PHE A 12 ? N PHE A 10 B 2 3 N GLY A 13 ? N GLY A 11 O VAL A 91 ? O VAL A 89 B 3 4 N MSE A 95 ? N MSE A 93 O GLY A 129 ? O GLY A 127 B 4 5 N ILE A 130 ? N ILE A 128 O ALA A 171 ? O ALA A 169 B 5 6 O VAL A 170 ? O VAL A 168 N GLY A 158 ? N GLY A 156 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE PO4 A 200' AC2 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE PO4 A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 THR A 15 ? THR A 13 . ? 1_555 ? 2 AC1 8 GLY A 16 ? GLY A 14 . ? 1_555 ? 3 AC1 8 THR A 96 ? THR A 94 . ? 1_555 ? 4 AC1 8 ASN A 98 ? ASN A 96 . ? 1_555 ? 5 AC1 8 SER A 99 ? SER A 97 . ? 1_555 ? 6 AC1 8 HOH D . ? HOH A 228 . ? 2_665 ? 7 AC1 8 HOH D . ? HOH A 248 . ? 1_555 ? 8 AC1 8 HOH D . ? HOH A 275 . ? 1_555 ? 9 AC2 3 GLU A 79 ? GLU A 77 . ? 1_555 ? 10 AC2 3 ARG A 121 ? ARG A 119 . ? 1_555 ? 11 AC2 3 ASN A 133 ? ASN A 131 . ? 3_565 ? # _database_PDB_matrix.entry_id 3LQK _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3LQK _atom_sites.fract_transf_matrix[1][1] 0.009076 _atom_sites.fract_transf_matrix[1][2] 0.005240 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010480 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014015 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 ? ? ? A . n A 1 2 HIS 2 0 ? ? ? A . n A 1 3 MSE 3 1 1 MSE MSE A . n A 1 4 ASN 4 2 2 ASN ASN A . n A 1 5 PHE 5 3 3 PHE PHE A . n A 1 6 ALA 6 4 4 ALA ALA A . n A 1 7 GLY 7 5 5 GLY GLY A . n A 1 8 LYS 8 6 6 LYS LYS A . n A 1 9 HIS 9 7 7 HIS HIS A . n A 1 10 VAL 10 8 8 VAL VAL A . n A 1 11 GLY 11 9 9 GLY GLY A . n A 1 12 PHE 12 10 10 PHE PHE A . n A 1 13 GLY 13 11 11 GLY GLY A . n A 1 14 LEU 14 12 12 LEU LEU A . n A 1 15 THR 15 13 13 THR THR A . n A 1 16 GLY 16 14 14 GLY GLY A . n A 1 17 SER 17 15 15 SER SER A . n A 1 18 HIS 18 16 16 HIS HIS A . n A 1 19 CYS 19 17 17 CYS CYS A . n A 1 20 THR 20 18 18 THR THR A . n A 1 21 TYR 21 19 19 TYR TYR A . n A 1 22 HIS 22 20 20 HIS HIS A . n A 1 23 GLU 23 21 21 GLU GLU A . n A 1 24 VAL 24 22 22 VAL VAL A . n A 1 25 LEU 25 23 23 LEU LEU A . n A 1 26 PRO 26 24 24 PRO PRO A . n A 1 27 GLN 27 25 25 GLN GLN A . n A 1 28 MSE 28 26 26 MSE MSE A . n A 1 29 GLU 29 27 27 GLU GLU A . n A 1 30 ARG 30 28 28 ARG ARG A . n A 1 31 LEU 31 29 29 LEU LEU A . n A 1 32 VAL 32 30 30 VAL VAL A . n A 1 33 GLU 33 31 31 GLU GLU A . n A 1 34 LEU 34 32 32 LEU LEU A . n A 1 35 GLY 35 33 33 GLY GLY A . n A 1 36 ALA 36 34 34 ALA ALA A . n A 1 37 LYS 37 35 35 LYS LYS A . n A 1 38 VAL 38 36 36 VAL VAL A . n A 1 39 THR 39 37 37 THR THR A . n A 1 40 PRO 40 38 38 PRO PRO A . n A 1 41 PHE 41 39 39 PHE PHE A . n A 1 42 VAL 42 40 40 VAL VAL A . n A 1 43 THR 43 41 41 THR THR A . n A 1 44 HIS 44 42 42 HIS HIS A . n A 1 45 THR 45 43 43 THR THR A . n A 1 46 VAL 46 44 44 VAL VAL A . n A 1 47 GLN 47 45 45 GLN GLN A . n A 1 48 THR 48 46 46 THR THR A . n A 1 49 THR 49 47 47 THR THR A . n A 1 50 ASP 50 48 48 ASP ASP A . n A 1 51 THR 51 49 49 THR THR A . n A 1 52 LYS 52 50 50 LYS LYS A . n A 1 53 PHE 53 51 51 PHE PHE A . n A 1 54 GLY 54 52 52 GLY GLY A . n A 1 55 GLU 55 53 53 GLU GLU A . n A 1 56 SER 56 54 54 SER SER A . n A 1 57 SER 57 55 55 SER SER A . n A 1 58 GLU 58 56 56 GLU GLU A . n A 1 59 TRP 59 57 57 TRP TRP A . n A 1 60 ILE 60 58 58 ILE ILE A . n A 1 61 ASN 61 59 59 ASN ASN A . n A 1 62 LYS 62 60 60 LYS LYS A . n A 1 63 ILE 63 61 61 ILE ILE A . n A 1 64 LYS 64 62 62 LYS LYS A . n A 1 65 GLN 65 63 63 GLN GLN A . n A 1 66 ILE 66 64 64 ILE ILE A . n A 1 67 THR 67 65 65 THR THR A . n A 1 68 GLU 68 66 66 GLU GLU A . n A 1 69 GLU 69 67 67 GLU GLU A . n A 1 70 PRO 70 68 68 PRO PRO A . n A 1 71 ILE 71 69 69 ILE ILE A . n A 1 72 VAL 72 70 70 VAL VAL A . n A 1 73 ASP 73 71 71 ASP ASP A . n A 1 74 SER 74 72 72 SER SER A . n A 1 75 MSE 75 73 73 MSE MSE A . n A 1 76 VAL 76 74 74 VAL VAL A . n A 1 77 LYS 77 75 75 LYS LYS A . n A 1 78 ALA 78 76 76 ALA ALA A . n A 1 79 GLU 79 77 77 GLU GLU A . n A 1 80 PRO 80 78 78 PRO PRO A . n A 1 81 PHE 81 79 79 PHE PHE A . n A 1 82 GLY 82 80 80 GLY GLY A . n A 1 83 PRO 83 81 81 PRO PRO A . n A 1 84 LYS 84 82 82 LYS LYS A . n A 1 85 THR 85 83 83 THR THR A . n A 1 86 PRO 86 84 84 PRO PRO A . n A 1 87 LEU 87 85 85 LEU LEU A . n A 1 88 ASP 88 86 86 ASP ASP A . n A 1 89 CYS 89 87 87 CYS CYS A . n A 1 90 MSE 90 88 88 MSE MSE A . n A 1 91 VAL 91 89 89 VAL VAL A . n A 1 92 ILE 92 90 90 ILE ILE A . n A 1 93 ALA 93 91 91 ALA ALA A . n A 1 94 PRO 94 92 92 PRO PRO A . n A 1 95 MSE 95 93 93 MSE MSE A . n A 1 96 THR 96 94 94 THR THR A . n A 1 97 GLY 97 95 95 GLY GLY A . n A 1 98 ASN 98 96 96 ASN ASN A . n A 1 99 SER 99 97 97 SER SER A . n A 1 100 THR 100 98 98 THR THR A . n A 1 101 SER 101 99 99 SER SER A . n A 1 102 LYS 102 100 100 LYS LYS A . n A 1 103 PHE 103 101 101 PHE PHE A . n A 1 104 ALA 104 102 102 ALA ALA A . n A 1 105 ASN 105 103 103 ASN ASN A . n A 1 106 ALA 106 104 104 ALA ALA A . n A 1 107 MSE 107 105 105 MSE MSE A . n A 1 108 THR 108 106 106 THR THR A . n A 1 109 ASP 109 107 107 ASP ASP A . n A 1 110 SER 110 108 108 SER SER A . n A 1 111 PRO 111 109 109 PRO PRO A . n A 1 112 VAL 112 110 110 VAL VAL A . n A 1 113 LEU 113 111 111 LEU LEU A . n A 1 114 MSE 114 112 112 MSE MSE A . n A 1 115 GLY 115 113 113 GLY GLY A . n A 1 116 ALA 116 114 114 ALA ALA A . n A 1 117 LYS 117 115 115 LYS LYS A . n A 1 118 ALA 118 116 116 ALA ALA A . n A 1 119 THR 119 117 117 THR THR A . n A 1 120 LEU 120 118 118 LEU LEU A . n A 1 121 ARG 121 119 119 ARG ARG A . n A 1 122 ASN 122 120 120 ASN ASN A . n A 1 123 GLY 123 121 121 GLY GLY A . n A 1 124 LYS 124 122 122 LYS LYS A . n A 1 125 PRO 125 123 123 PRO PRO A . n A 1 126 VAL 126 124 124 VAL VAL A . n A 1 127 VAL 127 125 125 VAL VAL A . n A 1 128 VAL 128 126 126 VAL VAL A . n A 1 129 GLY 129 127 127 GLY GLY A . n A 1 130 ILE 130 128 128 ILE ILE A . n A 1 131 SER 131 129 129 SER SER A . n A 1 132 THR 132 130 130 THR THR A . n A 1 133 ASN 133 131 131 ASN ASN A . n A 1 134 ASP 134 132 132 ASP ASP A . n A 1 135 ALA 135 133 133 ALA ALA A . n A 1 136 LEU 136 134 134 LEU LEU A . n A 1 137 GLY 137 135 135 GLY GLY A . n A 1 138 LEU 138 136 136 LEU LEU A . n A 1 139 ASN 139 137 137 ASN ASN A . n A 1 140 GLY 140 138 138 GLY GLY A . n A 1 141 ILE 141 139 139 ILE ILE A . n A 1 142 ASN 142 140 140 ASN ASN A . n A 1 143 ILE 143 141 141 ILE ILE A . n A 1 144 MSE 144 142 142 MSE MSE A . n A 1 145 ARG 145 143 143 ARG ARG A . n A 1 146 LEU 146 144 144 LEU LEU A . n A 1 147 MSE 147 145 145 MSE MSE A . n A 1 148 ALA 148 146 146 ALA ALA A . n A 1 149 THR 149 147 147 THR THR A . n A 1 150 LYS 150 148 148 LYS LYS A . n A 1 151 ASN 151 149 149 ASN ASN A . n A 1 152 ILE 152 150 150 ILE ILE A . n A 1 153 TYR 153 151 151 TYR TYR A . n A 1 154 PHE 154 152 152 PHE PHE A . n A 1 155 ILE 155 153 153 ILE ILE A . n A 1 156 PRO 156 154 154 PRO PRO A . n A 1 157 PHE 157 155 155 PHE PHE A . n A 1 158 GLY 158 156 156 GLY GLY A . n A 1 159 GLN 159 157 157 GLN GLN A . n A 1 160 ASP 160 158 158 ASP ASP A . n A 1 161 ASN 161 159 159 ASN ASN A . n A 1 162 PRO 162 160 160 PRO PRO A . n A 1 163 GLN 163 161 161 GLN GLN A . n A 1 164 VAL 164 162 162 VAL VAL A . n A 1 165 LYS 165 163 163 LYS LYS A . n A 1 166 PRO 166 164 164 PRO PRO A . n A 1 167 ASN 167 165 165 ASN ASN A . n A 1 168 SER 168 166 166 SER SER A . n A 1 169 LEU 169 167 167 LEU LEU A . n A 1 170 VAL 170 168 168 VAL VAL A . n A 1 171 ALA 171 169 169 ALA ALA A . n A 1 172 ARG 172 170 170 ARG ARG A . n A 1 173 MSE 173 171 171 MSE MSE A . n A 1 174 GLU 174 172 172 GLU GLU A . n A 1 175 ALA 175 173 173 ALA ALA A . n A 1 176 LEU 176 174 174 LEU LEU A . n A 1 177 PRO 177 175 175 PRO PRO A . n A 1 178 GLU 178 176 176 GLU GLU A . n A 1 179 THR 179 177 177 THR THR A . n A 1 180 ILE 180 178 178 ILE ILE A . n A 1 181 GLU 181 179 179 GLU GLU A . n A 1 182 ALA 182 180 180 ALA ALA A . n A 1 183 ALA 183 181 181 ALA ALA A . n A 1 184 LEU 184 182 182 LEU LEU A . n A 1 185 ARG 185 183 183 ARG ARG A . n A 1 186 GLY 186 184 184 GLY GLY A . n A 1 187 GLN 187 185 185 GLN GLN A . n A 1 188 GLN 188 186 186 GLN GLN A . n A 1 189 TYR 189 187 187 TYR TYR A . n A 1 190 GLN 190 188 188 GLN GLN A . n A 1 191 PRO 191 189 189 PRO PRO A . n A 1 192 VAL 192 190 190 VAL VAL A . n A 1 193 LEU 193 191 191 LEU LEU A . n A 1 194 ILE 194 192 192 ILE ILE A . n A 1 195 GLU 195 193 193 GLU GLU A . n A 1 196 LYS 196 194 194 LYS LYS A . n A 1 197 PHE 197 195 195 PHE PHE A . n A 1 198 ARG 198 196 ? ? ? A . n A 1 199 ASP 199 197 ? ? ? A . n A 1 200 GLY 200 198 ? ? ? A . n A 1 201 SER 201 199 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 1 200 200 PO4 PO4 A . C 2 PO4 1 201 201 PO4 PO4 A . D 3 HOH 1 202 202 HOH HOH A . D 3 HOH 2 203 203 HOH HOH A . D 3 HOH 3 204 204 HOH HOH A . D 3 HOH 4 205 205 HOH HOH A . D 3 HOH 5 206 206 HOH HOH A . D 3 HOH 6 207 207 HOH HOH A . D 3 HOH 7 208 208 HOH HOH A . D 3 HOH 8 209 209 HOH HOH A . D 3 HOH 9 210 210 HOH HOH A . D 3 HOH 10 211 211 HOH HOH A . D 3 HOH 11 212 212 HOH HOH A . D 3 HOH 12 213 213 HOH HOH A . D 3 HOH 13 214 214 HOH HOH A . D 3 HOH 14 215 215 HOH HOH A . D 3 HOH 15 216 216 HOH HOH A . D 3 HOH 16 217 217 HOH HOH A . D 3 HOH 17 218 218 HOH HOH A . D 3 HOH 18 219 219 HOH HOH A . D 3 HOH 19 220 220 HOH HOH A . D 3 HOH 20 221 221 HOH HOH A . D 3 HOH 21 222 222 HOH HOH A . D 3 HOH 22 223 223 HOH HOH A . D 3 HOH 23 224 224 HOH HOH A . D 3 HOH 24 225 225 HOH HOH A . D 3 HOH 25 226 226 HOH HOH A . D 3 HOH 26 227 227 HOH HOH A . D 3 HOH 27 228 228 HOH HOH A . D 3 HOH 28 229 229 HOH HOH A . D 3 HOH 29 230 230 HOH HOH A . D 3 HOH 30 231 231 HOH HOH A . D 3 HOH 31 232 232 HOH HOH A . D 3 HOH 32 233 233 HOH HOH A . D 3 HOH 33 234 234 HOH HOH A . D 3 HOH 34 235 235 HOH HOH A . D 3 HOH 35 236 236 HOH HOH A . D 3 HOH 36 237 237 HOH HOH A . D 3 HOH 37 238 238 HOH HOH A . D 3 HOH 38 239 239 HOH HOH A . D 3 HOH 39 240 240 HOH HOH A . D 3 HOH 40 241 241 HOH HOH A . D 3 HOH 41 242 242 HOH HOH A . D 3 HOH 42 243 243 HOH HOH A . D 3 HOH 43 244 244 HOH HOH A . D 3 HOH 44 245 245 HOH HOH A . D 3 HOH 45 246 246 HOH HOH A . D 3 HOH 46 247 247 HOH HOH A . D 3 HOH 47 248 248 HOH HOH A . D 3 HOH 48 249 249 HOH HOH A . D 3 HOH 49 250 250 HOH HOH A . D 3 HOH 50 251 251 HOH HOH A . D 3 HOH 51 252 252 HOH HOH A . D 3 HOH 52 253 253 HOH HOH A . D 3 HOH 53 254 254 HOH HOH A . D 3 HOH 54 255 255 HOH HOH A . D 3 HOH 55 256 256 HOH HOH A . D 3 HOH 56 257 257 HOH HOH A . D 3 HOH 57 258 258 HOH HOH A . D 3 HOH 58 259 259 HOH HOH A . D 3 HOH 59 260 260 HOH HOH A . D 3 HOH 60 261 261 HOH HOH A . D 3 HOH 61 262 262 HOH HOH A . D 3 HOH 62 263 263 HOH HOH A . D 3 HOH 63 264 264 HOH HOH A . D 3 HOH 64 265 265 HOH HOH A . D 3 HOH 65 266 266 HOH HOH A . D 3 HOH 66 267 267 HOH HOH A . D 3 HOH 67 268 268 HOH HOH A . D 3 HOH 68 269 269 HOH HOH A . D 3 HOH 69 270 270 HOH HOH A . D 3 HOH 70 271 271 HOH HOH A . D 3 HOH 71 272 272 HOH HOH A . D 3 HOH 72 273 273 HOH HOH A . D 3 HOH 73 274 274 HOH HOH A . D 3 HOH 74 275 275 HOH HOH A . D 3 HOH 75 276 276 HOH HOH A . D 3 HOH 76 277 277 HOH HOH A . D 3 HOH 77 278 278 HOH HOH A . D 3 HOH 78 279 279 HOH HOH A . D 3 HOH 79 280 280 HOH HOH A . D 3 HOH 80 281 281 HOH HOH A . D 3 HOH 81 282 282 HOH HOH A . D 3 HOH 82 283 283 HOH HOH A . D 3 HOH 83 284 284 HOH HOH A . D 3 HOH 84 285 285 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 3 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 28 A MSE 26 ? MET SELENOMETHIONINE 3 A MSE 75 A MSE 73 ? MET SELENOMETHIONINE 4 A MSE 90 A MSE 88 ? MET SELENOMETHIONINE 5 A MSE 95 A MSE 93 ? MET SELENOMETHIONINE 6 A MSE 107 A MSE 105 ? MET SELENOMETHIONINE 7 A MSE 114 A MSE 112 ? MET SELENOMETHIONINE 8 A MSE 144 A MSE 142 ? MET SELENOMETHIONINE 9 A MSE 147 A MSE 145 ? MET SELENOMETHIONINE 10 A MSE 173 A MSE 171 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 software_defined_assembly PISA hexameric 6 2 software_defined_assembly PISA trimeric 3 3 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2,3,4,5,6 A,B,C,D 2 1,2,3 A,B,C,D 3 1,4 A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 16820 ? 1 MORE -164 ? 1 'SSA (A^2)' 42920 ? 2 'ABSA (A^2)' 5070 ? 2 MORE -59 ? 2 'SSA (A^2)' 24800 ? 3 'ABSA (A^2)' 2460 ? 3 MORE -36 ? 3 'SSA (A^2)' 17460 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5000000000 -0.8660254038 0.0000000000 55.0925000000 0.8660254038 -0.5000000000 0.0000000000 95.4230091160 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_565 -x+y,-x+1,z -0.5000000000 0.8660254038 0.0000000000 -55.0925000000 -0.8660254038 -0.5000000000 0.0000000000 95.4230091160 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/2 0.5000000000 -0.8660254038 0.0000000000 55.0925000000 -0.8660254038 -0.5000000000 0.0000000000 95.4230091160 0.0000000000 0.0000000000 -1.0000000000 35.6750000000 5 'crystal symmetry operation' 11_555 -x+y,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 35.6750000000 6 'crystal symmetry operation' 12_565 x,x-y+1,-z+1/2 0.5000000000 0.8660254038 0.0000000000 -55.0925000000 0.8660254038 -0.5000000000 0.0000000000 95.4230091160 0.0000000000 0.0000000000 -1.0000000000 35.6750000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 272 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-03-23 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 9.6278 41.8054 -1.7784 0.1566 0.1420 0.1313 0.0038 -0.0038 -0.0416 1.2519 2.0684 0.8456 -0.1598 -0.5469 -0.0581 -0.0327 0.2485 -0.1127 -0.0275 0.0721 -0.1268 -0.0110 -0.0182 -0.0394 'X-RAY DIFFRACTION' 2 ? refined 17.4889 41.8877 -2.9022 0.1300 0.1549 0.1446 0.0139 0.0358 0.0036 3.8884 7.0889 3.1194 -4.4511 0.6082 -1.9642 -0.0194 0.2482 0.1196 -0.0497 -0.0165 -0.4956 -0.0954 0.0773 0.0359 'X-RAY DIFFRACTION' 3 ? refined 7.4166 41.0005 -5.2427 0.1421 0.1821 0.1110 0.0247 0.0043 -0.0440 2.1807 4.4914 0.5306 -1.1193 0.6746 -1.4286 0.0383 0.2607 -0.1278 -0.0201 -0.1509 0.0515 0.0142 -0.0078 0.1126 'X-RAY DIFFRACTION' 4 ? refined 10.0508 50.5485 -19.4317 0.4453 0.3230 0.0736 -0.0089 0.0159 0.0136 1.6418 2.4602 8.7490 -5.4453 5.7021 -9.3921 0.0891 0.1064 -0.0068 -0.4398 -0.0151 -0.0011 0.3940 0.0252 -0.0740 'X-RAY DIFFRACTION' 5 ? refined 4.9604 43.3046 -11.0376 0.1477 0.1951 0.0536 0.0137 -0.0085 -0.0435 6.8588 4.2477 0.6576 -3.4215 0.2257 -1.0246 -0.0233 0.4561 -0.1093 -0.2452 -0.0280 0.0513 0.0348 0.0170 0.0513 'X-RAY DIFFRACTION' 6 ? refined 1.2435 48.3311 1.5423 0.1461 0.1668 0.1291 0.0083 0.0114 -0.0087 0.5436 1.3398 0.3509 0.4450 -0.1800 0.4620 0.0125 0.0911 -0.0279 -0.0109 -0.0586 0.0139 -0.0135 -0.0724 0.0461 'X-RAY DIFFRACTION' 7 ? refined 4.0388 52.4117 5.9535 0.1593 0.1512 0.1305 0.0089 0.0099 0.0008 0.4924 0.2679 0.3197 0.2072 0.1951 0.2496 0.0035 0.0228 0.0516 -0.0159 -0.0600 0.0380 -0.0245 -0.0316 0.0565 'X-RAY DIFFRACTION' 8 ? refined 3.2206 50.4871 14.7941 0.1455 0.1508 0.1322 0.0052 0.0157 0.0035 0.6165 3.0288 1.4062 0.7954 -0.3860 0.4879 -0.0564 -0.0230 0.0779 0.0599 0.0765 -0.0811 0.0786 -0.0224 -0.0201 'X-RAY DIFFRACTION' 9 ? refined 16.3163 47.5298 10.0956 0.1423 0.1558 0.1218 0.0101 0.0128 0.0092 1.6522 1.8309 0.1616 1.0689 0.3736 0.2558 0.0233 -0.0053 -0.0993 0.0533 -0.0532 -0.0919 0.0247 0.0934 0.0299 'X-RAY DIFFRACTION' 10 ? refined 18.6951 45.6296 14.9753 0.1306 0.2052 0.2308 0.0119 0.0160 0.0530 -1.1217 2.4137 9.3707 -0.3288 1.0369 -5.0997 0.0282 -0.0719 -0.0539 0.0528 -0.5352 -0.3441 -0.0058 0.7623 0.5070 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 1 ? ? A 19 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 20 ? ? A 28 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 29 ? ? A 43 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 44 ? ? A 59 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 60 ? ? A 75 ? ? ? ? 'X-RAY DIFFRACTION' 6 6 A 76 ? ? A 104 ? ? ? ? 'X-RAY DIFFRACTION' 7 7 A 105 ? ? A 141 ? ? ? ? 'X-RAY DIFFRACTION' 8 8 A 142 ? ? A 150 ? ? ? ? 'X-RAY DIFFRACTION' 9 9 A 151 ? ? A 185 ? ? ? ? 'X-RAY DIFFRACTION' 10 10 A 186 ? ? A 195 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SBC-Collect 'data collection' . ? 1 HKL-3000 phasing . ? 2 DM 'model building' . ? 3 SHELX 'model building' . ? 4 MLPHARE phasing . ? 5 Coot 'model building' . ? 6 ARP/wARP 'model building' . ? 7 REFMAC refinement 5.5.0102 ? 8 HKL-3000 'data reduction' . ? 9 HKL-3000 'data scaling' . ? 10 DM phasing . ? 11 SHELX phasing . ? 12 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 129 ? ? -162.91 87.28 2 1 ASN A 159 ? ? -159.58 83.05 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A THR 46 ? OG1 ? A THR 48 OG1 2 1 Y 1 A THR 46 ? CG2 ? A THR 48 CG2 3 1 Y 1 A ASP 48 ? CG ? A ASP 50 CG 4 1 Y 1 A ASP 48 ? OD1 ? A ASP 50 OD1 5 1 Y 1 A ASP 48 ? OD2 ? A ASP 50 OD2 6 1 Y 1 A LYS 50 ? CG ? A LYS 52 CG 7 1 Y 1 A LYS 50 ? CD ? A LYS 52 CD 8 1 Y 1 A LYS 50 ? CE ? A LYS 52 CE 9 1 Y 1 A LYS 50 ? NZ ? A LYS 52 NZ 10 1 Y 1 A PHE 51 ? CG ? A PHE 53 CG 11 1 Y 1 A PHE 51 ? CD1 ? A PHE 53 CD1 12 1 Y 1 A PHE 51 ? CD2 ? A PHE 53 CD2 13 1 Y 1 A PHE 51 ? CE1 ? A PHE 53 CE1 14 1 Y 1 A PHE 51 ? CE2 ? A PHE 53 CE2 15 1 Y 1 A PHE 51 ? CZ ? A PHE 53 CZ 16 1 Y 1 A GLU 56 ? CG ? A GLU 58 CG 17 1 Y 1 A GLU 56 ? CD ? A GLU 58 CD 18 1 Y 1 A GLU 56 ? OE1 ? A GLU 58 OE1 19 1 Y 1 A GLU 56 ? OE2 ? A GLU 58 OE2 20 1 Y 1 A GLU 66 ? CG ? A GLU 68 CG 21 1 Y 1 A GLU 66 ? CD ? A GLU 68 CD 22 1 Y 1 A GLU 66 ? OE1 ? A GLU 68 OE1 23 1 Y 1 A GLU 66 ? OE2 ? A GLU 68 OE2 24 1 Y 1 A SER 99 ? OG ? A SER 101 OG 25 1 Y 1 A PHE 195 ? CG ? A PHE 197 CG 26 1 Y 1 A PHE 195 ? CD1 ? A PHE 197 CD1 27 1 Y 1 A PHE 195 ? CD2 ? A PHE 197 CD2 28 1 Y 1 A PHE 195 ? CE1 ? A PHE 197 CE1 29 1 Y 1 A PHE 195 ? CE2 ? A PHE 197 CE2 30 1 Y 1 A PHE 195 ? CZ ? A PHE 197 CZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -1 ? A GLY 1 2 1 Y 1 A HIS 0 ? A HIS 2 3 1 Y 1 A ARG 196 ? A ARG 198 4 1 Y 1 A ASP 197 ? A ASP 199 5 1 Y 1 A GLY 198 ? A GLY 200 6 1 Y 1 A SER 199 ? A SER 201 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PHOSPHATE ION' PO4 3 water HOH #