data_3LR0 # _entry.id 3LR0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3LR0 pdb_00003lr0 10.2210/pdb3lr0/pdb RCSB RCSB057621 ? ? WWPDB D_1000057621 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-06-16 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Refinement description' 3 2 'Structure model' 'Version format compliance' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Database references' 6 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_struct_special_symmetry 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 3LR0 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-02-10 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3LR3 'low pH native structure' unspecified PDB 3LR4 'low pH barium structure' unspecified PDB 3LR5 'neutral pH structure' unspecified TargetDB BupsA.00863.i . unspecified # _audit_author.name 'Seattle Structural Genomics Center for Infectious Disease (SSGCID)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Structural basis for pH sensing by the periplasmic domain of the risS histidine kinase from Bukholderia pseudomallei' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Edwards, T.E.' 1 ? primary 'Abendroth, J.' 2 ? primary 'Staker, B.L.' 3 ? primary 'Phan, I.' 4 ? primary 'Myler, P.' 5 ? primary 'Stacy, R.' 6 ? primary 'Stewart, L.' 7 ? primary 'Miller, S.I.' 8 ? primary 'Seattle Structural Genomics Center for Infectious Disease (SSGCID)' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Sensor protein' 16445.494 1 2.7.13.3 ? ? ? 2 non-polymer syn 'IODIDE ION' 126.904 6 ? ? ? ? 3 water nat water 18.015 71 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MAHHHHHHMGTLEAQTQGPGSMFRVIEREPRAQRVALQLVAIVKLTRTALLYSDPDLRRALLQDLESNEGVRVYPREKTD KFKLQPDESVNRLIEHDIRSRLGDDTVIAQSVNDIPGVWISFKIDDDDYWVALDRDQLDTVTG ; _entity_poly.pdbx_seq_one_letter_code_can ;MAHHHHHHMGTLEAQTQGPGSMFRVIEREPRAQRVALQLVAIVKLTRTALLYSDPDLRRALLQDLESNEGVRVYPREKTD KFKLQPDESVNRLIEHDIRSRLGDDTVIAQSVNDIPGVWISFKIDDDDYWVALDRDQLDTVTG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier BupsA.00863.i # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'IODIDE ION' IOD 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 MET n 1 10 GLY n 1 11 THR n 1 12 LEU n 1 13 GLU n 1 14 ALA n 1 15 GLN n 1 16 THR n 1 17 GLN n 1 18 GLY n 1 19 PRO n 1 20 GLY n 1 21 SER n 1 22 MET n 1 23 PHE n 1 24 ARG n 1 25 VAL n 1 26 ILE n 1 27 GLU n 1 28 ARG n 1 29 GLU n 1 30 PRO n 1 31 ARG n 1 32 ALA n 1 33 GLN n 1 34 ARG n 1 35 VAL n 1 36 ALA n 1 37 LEU n 1 38 GLN n 1 39 LEU n 1 40 VAL n 1 41 ALA n 1 42 ILE n 1 43 VAL n 1 44 LYS n 1 45 LEU n 1 46 THR n 1 47 ARG n 1 48 THR n 1 49 ALA n 1 50 LEU n 1 51 LEU n 1 52 TYR n 1 53 SER n 1 54 ASP n 1 55 PRO n 1 56 ASP n 1 57 LEU n 1 58 ARG n 1 59 ARG n 1 60 ALA n 1 61 LEU n 1 62 LEU n 1 63 GLN n 1 64 ASP n 1 65 LEU n 1 66 GLU n 1 67 SER n 1 68 ASN n 1 69 GLU n 1 70 GLY n 1 71 VAL n 1 72 ARG n 1 73 VAL n 1 74 TYR n 1 75 PRO n 1 76 ARG n 1 77 GLU n 1 78 LYS n 1 79 THR n 1 80 ASP n 1 81 LYS n 1 82 PHE n 1 83 LYS n 1 84 LEU n 1 85 GLN n 1 86 PRO n 1 87 ASP n 1 88 GLU n 1 89 SER n 1 90 VAL n 1 91 ASN n 1 92 ARG n 1 93 LEU n 1 94 ILE n 1 95 GLU n 1 96 HIS n 1 97 ASP n 1 98 ILE n 1 99 ARG n 1 100 SER n 1 101 ARG n 1 102 LEU n 1 103 GLY n 1 104 ASP n 1 105 ASP n 1 106 THR n 1 107 VAL n 1 108 ILE n 1 109 ALA n 1 110 GLN n 1 111 SER n 1 112 VAL n 1 113 ASN n 1 114 ASP n 1 115 ILE n 1 116 PRO n 1 117 GLY n 1 118 VAL n 1 119 TRP n 1 120 ILE n 1 121 SER n 1 122 PHE n 1 123 LYS n 1 124 ILE n 1 125 ASP n 1 126 ASP n 1 127 ASP n 1 128 ASP n 1 129 TYR n 1 130 TRP n 1 131 VAL n 1 132 ALA n 1 133 LEU n 1 134 ASP n 1 135 ARG n 1 136 ASP n 1 137 GLN n 1 138 LEU n 1 139 ASP n 1 140 THR n 1 141 VAL n 1 142 THR n 1 143 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Pseudomonas pseudomallei' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene BPSL2095 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 1710b _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Burkholderia pseudomallei' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 28450 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type AVA0421 _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IOD non-polymer . 'IODIDE ION' ? 'I -1' 126.904 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 9 ? ? ? A . n A 1 2 ALA 2 10 ? ? ? A . n A 1 3 HIS 3 11 ? ? ? A . n A 1 4 HIS 4 12 ? ? ? A . n A 1 5 HIS 5 13 ? ? ? A . n A 1 6 HIS 6 14 ? ? ? A . n A 1 7 HIS 7 15 ? ? ? A . n A 1 8 HIS 8 16 ? ? ? A . n A 1 9 MET 9 17 ? ? ? A . n A 1 10 GLY 10 18 ? ? ? A . n A 1 11 THR 11 19 ? ? ? A . n A 1 12 LEU 12 20 ? ? ? A . n A 1 13 GLU 13 21 ? ? ? A . n A 1 14 ALA 14 22 ? ? ? A . n A 1 15 GLN 15 23 ? ? ? A . n A 1 16 THR 16 24 ? ? ? A . n A 1 17 GLN 17 25 ? ? ? A . n A 1 18 GLY 18 26 ? ? ? A . n A 1 19 PRO 19 27 ? ? ? A . n A 1 20 GLY 20 28 ? ? ? A . n A 1 21 SER 21 29 ? ? ? A . n A 1 22 MET 22 30 ? ? ? A . n A 1 23 PHE 23 31 ? ? ? A . n A 1 24 ARG 24 32 ? ? ? A . n A 1 25 VAL 25 33 ? ? ? A . n A 1 26 ILE 26 34 ? ? ? A . n A 1 27 GLU 27 35 ? ? ? A . n A 1 28 ARG 28 36 ? ? ? A . n A 1 29 GLU 29 37 ? ? ? A . n A 1 30 PRO 30 38 ? ? ? A . n A 1 31 ARG 31 39 ? ? ? A . n A 1 32 ALA 32 40 40 ALA ALA A . n A 1 33 GLN 33 41 41 GLN GLN A . n A 1 34 ARG 34 42 42 ARG ARG A . n A 1 35 VAL 35 43 43 VAL VAL A . n A 1 36 ALA 36 44 44 ALA ALA A . n A 1 37 LEU 37 45 45 LEU LEU A . n A 1 38 GLN 38 46 46 GLN GLN A . n A 1 39 LEU 39 47 47 LEU LEU A . n A 1 40 VAL 40 48 48 VAL VAL A . n A 1 41 ALA 41 49 49 ALA ALA A . n A 1 42 ILE 42 50 50 ILE ILE A . n A 1 43 VAL 43 51 51 VAL VAL A . n A 1 44 LYS 44 52 52 LYS LYS A . n A 1 45 LEU 45 53 53 LEU LEU A . n A 1 46 THR 46 54 54 THR THR A . n A 1 47 ARG 47 55 55 ARG ARG A . n A 1 48 THR 48 56 56 THR THR A . n A 1 49 ALA 49 57 57 ALA ALA A . n A 1 50 LEU 50 58 58 LEU LEU A . n A 1 51 LEU 51 59 59 LEU LEU A . n A 1 52 TYR 52 60 60 TYR TYR A . n A 1 53 SER 53 61 61 SER SER A . n A 1 54 ASP 54 62 62 ASP ASP A . n A 1 55 PRO 55 63 63 PRO PRO A . n A 1 56 ASP 56 64 64 ASP ASP A . n A 1 57 LEU 57 65 65 LEU LEU A . n A 1 58 ARG 58 66 66 ARG ARG A . n A 1 59 ARG 59 67 67 ARG ARG A . n A 1 60 ALA 60 68 68 ALA ALA A . n A 1 61 LEU 61 69 69 LEU LEU A . n A 1 62 LEU 62 70 70 LEU LEU A . n A 1 63 GLN 63 71 71 GLN GLN A . n A 1 64 ASP 64 72 72 ASP ASP A . n A 1 65 LEU 65 73 73 LEU LEU A . n A 1 66 GLU 66 74 74 GLU GLU A . n A 1 67 SER 67 75 75 SER SER A . n A 1 68 ASN 68 76 76 ASN ASN A . n A 1 69 GLU 69 77 77 GLU GLU A . n A 1 70 GLY 70 78 78 GLY GLY A . n A 1 71 VAL 71 79 79 VAL VAL A . n A 1 72 ARG 72 80 80 ARG ARG A . n A 1 73 VAL 73 81 81 VAL VAL A . n A 1 74 TYR 74 82 82 TYR TYR A . n A 1 75 PRO 75 83 83 PRO PRO A . n A 1 76 ARG 76 84 84 ARG ARG A . n A 1 77 GLU 77 85 85 GLU GLU A . n A 1 78 LYS 78 86 86 LYS LYS A . n A 1 79 THR 79 87 87 THR THR A . n A 1 80 ASP 80 88 88 ASP ASP A . n A 1 81 LYS 81 89 89 LYS LYS A . n A 1 82 PHE 82 90 90 PHE PHE A . n A 1 83 LYS 83 91 91 LYS LYS A . n A 1 84 LEU 84 92 92 LEU LEU A . n A 1 85 GLN 85 93 93 GLN GLN A . n A 1 86 PRO 86 94 94 PRO PRO A . n A 1 87 ASP 87 95 95 ASP ASP A . n A 1 88 GLU 88 96 96 GLU GLU A . n A 1 89 SER 89 97 97 SER SER A . n A 1 90 VAL 90 98 98 VAL VAL A . n A 1 91 ASN 91 99 99 ASN ASN A . n A 1 92 ARG 92 100 100 ARG ARG A . n A 1 93 LEU 93 101 101 LEU LEU A . n A 1 94 ILE 94 102 102 ILE ILE A . n A 1 95 GLU 95 103 103 GLU GLU A . n A 1 96 HIS 96 104 104 HIS HIS A . n A 1 97 ASP 97 105 105 ASP ASP A . n A 1 98 ILE 98 106 106 ILE ILE A . n A 1 99 ARG 99 107 107 ARG ARG A . n A 1 100 SER 100 108 108 SER SER A . n A 1 101 ARG 101 109 109 ARG ARG A . n A 1 102 LEU 102 110 110 LEU LEU A . n A 1 103 GLY 103 111 111 GLY GLY A . n A 1 104 ASP 104 112 112 ASP ASP A . n A 1 105 ASP 105 113 113 ASP ASP A . n A 1 106 THR 106 114 114 THR THR A . n A 1 107 VAL 107 115 115 VAL VAL A . n A 1 108 ILE 108 116 116 ILE ILE A . n A 1 109 ALA 109 117 117 ALA ALA A . n A 1 110 GLN 110 118 118 GLN GLN A . n A 1 111 SER 111 119 119 SER SER A . n A 1 112 VAL 112 120 120 VAL VAL A . n A 1 113 ASN 113 121 121 ASN ASN A . n A 1 114 ASP 114 122 122 ASP ASP A . n A 1 115 ILE 115 123 123 ILE ILE A . n A 1 116 PRO 116 124 124 PRO PRO A . n A 1 117 GLY 117 125 125 GLY GLY A . n A 1 118 VAL 118 126 126 VAL VAL A . n A 1 119 TRP 119 127 127 TRP TRP A . n A 1 120 ILE 120 128 128 ILE ILE A . n A 1 121 SER 121 129 129 SER SER A . n A 1 122 PHE 122 130 130 PHE PHE A . n A 1 123 LYS 123 131 131 LYS LYS A . n A 1 124 ILE 124 132 132 ILE ILE A . n A 1 125 ASP 125 133 133 ASP ASP A . n A 1 126 ASP 126 134 134 ASP ASP A . n A 1 127 ASP 127 135 135 ASP ASP A . n A 1 128 ASP 128 136 136 ASP ASP A . n A 1 129 TYR 129 137 137 TYR TYR A . n A 1 130 TRP 130 138 138 TRP TRP A . n A 1 131 VAL 131 139 139 VAL VAL A . n A 1 132 ALA 132 140 140 ALA ALA A . n A 1 133 LEU 133 141 141 LEU LEU A . n A 1 134 ASP 134 142 ? ? ? A . n A 1 135 ARG 135 143 ? ? ? A . n A 1 136 ASP 136 144 ? ? ? A . n A 1 137 GLN 137 145 ? ? ? A . n A 1 138 LEU 138 146 ? ? ? A . n A 1 139 ASP 139 147 ? ? ? A . n A 1 140 THR 140 148 ? ? ? A . n A 1 141 VAL 141 149 ? ? ? A . n A 1 142 THR 142 150 ? ? ? A . n A 1 143 GLY 143 151 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IOD 1 1 1 IOD IOD A . C 2 IOD 1 2 2 IOD IOD A . D 2 IOD 1 3 3 IOD IOD A . E 2 IOD 1 4 4 IOD IOD A . F 2 IOD 1 5 5 IOD IOD A . G 2 IOD 1 6 6 IOD IOD A . H 3 HOH 1 7 7 HOH HOH A . H 3 HOH 2 8 8 HOH HOH A . H 3 HOH 3 152 1 HOH HOH A . H 3 HOH 4 153 2 HOH HOH A . H 3 HOH 5 154 3 HOH HOH A . H 3 HOH 6 155 4 HOH HOH A . H 3 HOH 7 156 5 HOH HOH A . H 3 HOH 8 157 6 HOH HOH A . H 3 HOH 9 158 9 HOH HOH A . H 3 HOH 10 159 10 HOH HOH A . H 3 HOH 11 160 11 HOH HOH A . H 3 HOH 12 161 12 HOH HOH A . H 3 HOH 13 162 13 HOH HOH A . H 3 HOH 14 163 14 HOH HOH A . H 3 HOH 15 164 15 HOH HOH A . H 3 HOH 16 165 17 HOH HOH A . H 3 HOH 17 166 18 HOH HOH A . H 3 HOH 18 167 19 HOH HOH A . H 3 HOH 19 168 20 HOH HOH A . H 3 HOH 20 169 21 HOH HOH A . H 3 HOH 21 170 22 HOH HOH A . H 3 HOH 22 171 23 HOH HOH A . H 3 HOH 23 172 24 HOH HOH A . H 3 HOH 24 173 25 HOH HOH A . H 3 HOH 25 174 26 HOH HOH A . H 3 HOH 26 175 27 HOH HOH A . H 3 HOH 27 176 28 HOH HOH A . H 3 HOH 28 177 29 HOH HOH A . H 3 HOH 29 178 31 HOH HOH A . H 3 HOH 30 179 32 HOH HOH A . H 3 HOH 31 180 33 HOH HOH A . H 3 HOH 32 181 34 HOH HOH A . H 3 HOH 33 182 35 HOH HOH A . H 3 HOH 34 183 36 HOH HOH A . H 3 HOH 35 184 37 HOH HOH A . H 3 HOH 36 185 38 HOH HOH A . H 3 HOH 37 186 39 HOH HOH A . H 3 HOH 38 187 40 HOH HOH A . H 3 HOH 39 188 41 HOH HOH A . H 3 HOH 40 189 42 HOH HOH A . H 3 HOH 41 190 43 HOH HOH A . H 3 HOH 42 191 44 HOH HOH A . H 3 HOH 43 192 45 HOH HOH A . H 3 HOH 44 193 46 HOH HOH A . H 3 HOH 45 194 47 HOH HOH A . H 3 HOH 46 195 48 HOH HOH A . H 3 HOH 47 196 49 HOH HOH A . H 3 HOH 48 197 50 HOH HOH A . H 3 HOH 49 198 51 HOH HOH A . H 3 HOH 50 199 53 HOH HOH A . H 3 HOH 51 200 55 HOH HOH A . H 3 HOH 52 201 56 HOH HOH A . H 3 HOH 53 202 57 HOH HOH A . H 3 HOH 54 203 58 HOH HOH A . H 3 HOH 55 204 60 HOH HOH A . H 3 HOH 56 205 61 HOH HOH A . H 3 HOH 57 206 62 HOH HOH A . H 3 HOH 58 207 63 HOH HOH A . H 3 HOH 59 208 64 HOH HOH A . H 3 HOH 60 209 65 HOH HOH A . H 3 HOH 61 210 66 HOH HOH A . H 3 HOH 62 211 67 HOH HOH A . H 3 HOH 63 212 68 HOH HOH A . H 3 HOH 64 213 69 HOH HOH A . H 3 HOH 65 214 70 HOH HOH A . H 3 HOH 66 215 71 HOH HOH A . H 3 HOH 67 216 72 HOH HOH A . H 3 HOH 68 217 73 HOH HOH A . H 3 HOH 69 218 74 HOH HOH A . H 3 HOH 70 219 75 HOH HOH A . H 3 HOH 71 220 76 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 41 ? CG ? A GLN 33 CG 2 1 Y 1 A GLN 41 ? CD ? A GLN 33 CD 3 1 Y 1 A GLN 41 ? OE1 ? A GLN 33 OE1 4 1 Y 1 A GLN 41 ? NE2 ? A GLN 33 NE2 5 1 Y 1 A ARG 42 ? CG ? A ARG 34 CG 6 1 Y 1 A ARG 42 ? CD ? A ARG 34 CD 7 1 Y 1 A ARG 42 ? NE ? A ARG 34 NE 8 1 Y 1 A ARG 42 ? CZ ? A ARG 34 CZ 9 1 Y 1 A ARG 42 ? NH1 ? A ARG 34 NH1 10 1 Y 1 A ARG 42 ? NH2 ? A ARG 34 NH2 11 1 Y 1 A LYS 86 ? CG ? A LYS 78 CG 12 1 Y 1 A LYS 86 ? CD ? A LYS 78 CD 13 1 Y 1 A LYS 86 ? CE ? A LYS 78 CE 14 1 Y 1 A LYS 86 ? NZ ? A LYS 78 NZ 15 1 Y 1 A LYS 91 ? CG ? A LYS 83 CG 16 1 Y 1 A LYS 91 ? CD ? A LYS 83 CD 17 1 Y 1 A LYS 91 ? CE ? A LYS 83 CE 18 1 Y 1 A LYS 91 ? NZ ? A LYS 83 NZ 19 1 Y 1 A ASP 134 ? CG ? A ASP 126 CG 20 1 Y 1 A ASP 134 ? OD1 ? A ASP 126 OD1 21 1 Y 1 A ASP 134 ? OD2 ? A ASP 126 OD2 # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 2 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 XDS . ? ? ? ? 'data reduction' ? ? ? # _cell.length_a 58.360 _cell.length_b 58.360 _cell.length_c 75.690 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 3LR0 _cell.pdbx_unique_axis ? _cell.Z_PDB 6 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.entry_id 3LR0 _symmetry.Int_Tables_number 154 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 3LR0 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.26 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 45.64 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 4.2 _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details ;Crystal originally grown in JCSG+ condition a6, 0.1M phosphate-citrate pH 4.2, 0.2 M lithium sulfate, 25% PEG 1000 then soaked and cryo-protected into 0.1 M Na citrate pH 4.5, 1.0 M KI, 30% PEG 1000 for 1 hour prior to vitrification; crystal tracking IDs 203087a6 for growth and 206239a1 for soak; affinity tag not removed prior to crystallization, VAPOR DIFFUSION, SITTING DROP, temperature 289K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU SATURN 944' _diffrn_detector.pdbx_collection_date 2009-12-10 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 3LR0 _reflns.d_resolution_high 1.900 _reflns.number_obs 12191 _reflns.pdbx_Rmerge_I_obs 0.046 _reflns.pdbx_netI_over_sigmaI 25.450 _reflns.percent_possible_obs 99.800 _reflns.B_iso_Wilson_estimate 32.657 _reflns.observed_criterion_sigma_I -3.00 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 19.10 _reflns.number_all 12212 _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy 11.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 1.95 _reflns_shell.number_measured_obs 4275 _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs 924 _reflns_shell.Rmerge_I_obs 0.337 _reflns_shell.meanI_over_sigI_obs 4.1 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_redundancy 8.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 925 _reflns_shell.percent_possible_all 99.90 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3LR0 _refine.ls_d_res_high 1.900 _refine.ls_d_res_low 19.10 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.840 _refine.ls_number_reflns_obs 12191 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : RESIDUAL ONLY' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.213 _refine.ls_R_factor_R_work 0.211 _refine.ls_wR_factor_R_work 0.209 _refine.ls_R_factor_R_free 0.254 _refine.ls_wR_factor_R_free 0.254 _refine.ls_percent_reflns_R_free 4.800 _refine.ls_number_reflns_R_free 585 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 18.791 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.460 _refine.aniso_B[2][2] 0.460 _refine.aniso_B[3][3] -0.690 _refine.aniso_B[1][2] 0.230 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.941 _refine.correlation_coeff_Fo_to_Fc_free 0.914 _refine.overall_SU_R_Cruickshank_DPI 0.140 _refine.overall_SU_R_free 0.139 _refine.pdbx_overall_ESU_R 0.140 _refine.pdbx_overall_ESU_R_Free 0.139 _refine.overall_SU_ML 0.089 _refine.overall_SU_B 5.636 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.839 _refine.B_iso_max 60.93 _refine.B_iso_min 2.95 _refine.occupancy_max 1.00 _refine.occupancy_min 0.22 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 806 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 71 _refine_hist.number_atoms_total 883 _refine_hist.d_res_high 1.900 _refine_hist.d_res_low 19.10 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 875 0.016 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1204 1.388 1.973 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 117 5.971 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 45 32.792 23.333 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 154 14.385 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 11 20.377 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 143 0.089 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 675 0.006 0.021 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 534 0.864 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 874 1.568 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 341 2.416 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 322 4.041 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.900 _refine_ls_shell.d_res_low 1.949 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.890 _refine_ls_shell.number_reflns_R_work 875 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.216 _refine_ls_shell.R_factor_R_free 0.230 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 47 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 922 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3LR0 _struct.title 'Periplasmic domain of the risS sensor protein from Burkholderia pseudomallei, iodide phased at low pH' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3LR0 _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text ;NIAID, Seattle Structural Genomics Center for Infectious Disease, SSGCID, pH, sensor protein, risS, iodide phased, Burkholderia, melioidosis, ATP-binding, Kinase, Membrane, Nucleotide-binding, Phosphoprotein, Transferase, Transmembrane, Two-component regulatory system ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q63T74_BURPS _struct_ref.pdbx_db_accession Q63T74 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;FRVIEREPRAQRVALQLVAIVKLTRTALLYSDPDLRRALLQDLESNEGVRVYPREKTDKFKLQPDESVNRLIEHDIRSRL GDDTVIAQSVNDIPGVWISFKIDDDDYWVALDRDQLDTVTG ; _struct_ref.pdbx_align_begin 38 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3LR0 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 23 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 143 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q63T74 _struct_ref_seq.db_align_beg 38 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 158 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 31 _struct_ref_seq.pdbx_auth_seq_align_end 151 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3LR0 MET A 1 ? UNP Q63T74 ? ? 'expression tag' 9 1 1 3LR0 ALA A 2 ? UNP Q63T74 ? ? 'expression tag' 10 2 1 3LR0 HIS A 3 ? UNP Q63T74 ? ? 'expression tag' 11 3 1 3LR0 HIS A 4 ? UNP Q63T74 ? ? 'expression tag' 12 4 1 3LR0 HIS A 5 ? UNP Q63T74 ? ? 'expression tag' 13 5 1 3LR0 HIS A 6 ? UNP Q63T74 ? ? 'expression tag' 14 6 1 3LR0 HIS A 7 ? UNP Q63T74 ? ? 'expression tag' 15 7 1 3LR0 HIS A 8 ? UNP Q63T74 ? ? 'expression tag' 16 8 1 3LR0 MET A 9 ? UNP Q63T74 ? ? 'expression tag' 17 9 1 3LR0 GLY A 10 ? UNP Q63T74 ? ? 'expression tag' 18 10 1 3LR0 THR A 11 ? UNP Q63T74 ? ? 'expression tag' 19 11 1 3LR0 LEU A 12 ? UNP Q63T74 ? ? 'expression tag' 20 12 1 3LR0 GLU A 13 ? UNP Q63T74 ? ? 'expression tag' 21 13 1 3LR0 ALA A 14 ? UNP Q63T74 ? ? 'expression tag' 22 14 1 3LR0 GLN A 15 ? UNP Q63T74 ? ? 'expression tag' 23 15 1 3LR0 THR A 16 ? UNP Q63T74 ? ? 'expression tag' 24 16 1 3LR0 GLN A 17 ? UNP Q63T74 ? ? 'expression tag' 25 17 1 3LR0 GLY A 18 ? UNP Q63T74 ? ? 'expression tag' 26 18 1 3LR0 PRO A 19 ? UNP Q63T74 ? ? 'expression tag' 27 19 1 3LR0 GLY A 20 ? UNP Q63T74 ? ? 'expression tag' 28 20 1 3LR0 SER A 21 ? UNP Q63T74 ? ? 'expression tag' 29 21 1 3LR0 MET A 22 ? UNP Q63T74 ? ? 'expression tag' 30 22 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1670 ? 1 MORE -11 ? 1 'SSA (A^2)' 10970 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_555 y,x,-z -0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 32 ? SER A 53 ? ALA A 40 SER A 61 1 ? 22 HELX_P HELX_P2 2 ASP A 54 ? ASP A 56 ? ASP A 62 ASP A 64 5 ? 3 HELX_P HELX_P3 3 LEU A 57 ? GLY A 70 ? LEU A 65 GLY A 78 1 ? 14 HELX_P HELX_P4 4 VAL A 90 ? GLY A 103 ? VAL A 98 GLY A 111 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 72 ? PRO A 75 ? ARG A 80 PRO A 83 A 2 ASP A 127 ? LEU A 133 ? ASP A 135 LEU A 141 A 3 ILE A 115 ? ILE A 124 ? ILE A 123 ILE A 132 A 4 ILE A 108 ? VAL A 112 ? ILE A 116 VAL A 120 A 5 PHE A 82 ? LYS A 83 ? PHE A 90 LYS A 91 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 72 ? N ARG A 80 O ALA A 132 ? O ALA A 140 A 2 3 O TYR A 129 ? O TYR A 137 N PHE A 122 ? N PHE A 130 A 3 4 O TRP A 119 ? O TRP A 127 N ALA A 109 ? N ALA A 117 A 4 5 O GLN A 110 ? O GLN A 118 N LYS A 83 ? N LYS A 91 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A IOD 2 ? 2 'BINDING SITE FOR RESIDUE IOD A 2' AC2 Software A IOD 4 ? 3 'BINDING SITE FOR RESIDUE IOD A 4' AC3 Software A IOD 5 ? 2 'BINDING SITE FOR RESIDUE IOD A 5' AC4 Software A IOD 6 ? 1 'BINDING SITE FOR RESIDUE IOD A 6' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 GLN A 38 ? GLN A 46 . ? 1_555 ? 2 AC1 2 GLN A 38 ? GLN A 46 . ? 4_555 ? 3 AC2 3 LYS A 81 ? LYS A 89 . ? 1_555 ? 4 AC2 3 SER A 111 ? SER A 119 . ? 1_555 ? 5 AC2 3 ASP A 114 ? ASP A 122 . ? 1_555 ? 6 AC3 2 ARG A 59 ? ARG A 67 . ? 1_555 ? 7 AC3 2 PRO A 75 ? PRO A 83 . ? 1_555 ? 8 AC4 1 LYS A 123 ? LYS A 131 . ? 1_555 ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CD _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 GLN _pdbx_validate_rmsd_bond.auth_seq_id_1 46 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 B _pdbx_validate_rmsd_bond.auth_atom_id_2 NE2 _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 GLN _pdbx_validate_rmsd_bond.auth_seq_id_2 46 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 B _pdbx_validate_rmsd_bond.bond_value 1.056 _pdbx_validate_rmsd_bond.bond_target_value 1.324 _pdbx_validate_rmsd_bond.bond_deviation -0.268 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.025 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 97 ? ? 49.03 -114.53 2 1 ASP A 133 ? ? 55.15 -123.92 # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Seattle Structural Genomics Center for Infectious Disease' _pdbx_SG_project.initial_of_center SSGCID # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id GLN _pdbx_struct_special_symmetry.auth_seq_id 46 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id A _pdbx_struct_special_symmetry.label_comp_id GLN _pdbx_struct_special_symmetry.label_seq_id 38 # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 1.900 _diffrn_reflns.pdbx_d_res_low ? _diffrn_reflns.pdbx_number_obs 12191 _diffrn_reflns.pdbx_Rmerge_I_obs 0.046 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared ? _diffrn_reflns.av_sigmaI_over_netI ? _diffrn_reflns.pdbx_redundancy ? _diffrn_reflns.pdbx_percent_possible_obs 99.80 _diffrn_reflns.number 89341 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 8.50 19.10 147 ? 0.032 ? ? ? 89.10 1 6.01 8.50 270 ? 0.033 ? ? ? 99.60 1 4.91 6.01 345 ? 0.036 ? ? ? 100.00 1 4.25 4.91 401 ? 0.030 ? ? ? 100.00 1 3.80 4.25 446 ? 0.032 ? ? ? 100.00 1 3.47 3.80 495 ? 0.032 ? ? ? 100.00 1 3.21 3.47 529 ? 0.039 ? ? ? 100.00 1 3.00 3.21 555 ? 0.044 ? ? ? 100.00 1 2.83 3.00 604 ? 0.054 ? ? ? 100.00 1 2.69 2.83 628 ? 0.065 ? ? ? 99.80 1 2.56 2.69 661 ? 0.067 ? ? ? 100.00 1 2.45 2.56 665 ? 0.087 ? ? ? 100.00 1 2.36 2.45 727 ? 0.090 ? ? ? 100.00 1 2.27 2.36 743 ? 0.110 ? ? ? 100.00 1 2.19 2.27 770 ? 0.120 ? ? ? 100.00 1 2.12 2.19 788 ? 0.148 ? ? ? 100.00 1 2.06 2.12 824 ? 0.185 ? ? ? 100.00 1 2.00 2.06 829 ? 0.240 ? ? ? 100.00 1 1.95 2.00 840 ? 0.330 ? ? ? 100.00 1 1.90 1.95 924 ? 0.337 ? ? ? 99.90 # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 2.7336 _pdbx_refine_tls.origin_y 25.2005 _pdbx_refine_tls.origin_z 6.1664 _pdbx_refine_tls.T[1][1] 0.0320 _pdbx_refine_tls.T[2][2] 0.0652 _pdbx_refine_tls.T[3][3] 0.0300 _pdbx_refine_tls.T[1][2] 0.0193 _pdbx_refine_tls.T[1][3] 0.0014 _pdbx_refine_tls.T[2][3] -0.0218 _pdbx_refine_tls.L[1][1] 3.3633 _pdbx_refine_tls.L[2][2] 0.8835 _pdbx_refine_tls.L[3][3] 2.2485 _pdbx_refine_tls.L[1][2] -0.2251 _pdbx_refine_tls.L[1][3] -1.9038 _pdbx_refine_tls.L[2][3] -0.1266 _pdbx_refine_tls.S[1][1] -0.0822 _pdbx_refine_tls.S[2][2] -0.0531 _pdbx_refine_tls.S[3][3] 0.1353 _pdbx_refine_tls.S[1][2] 0.0132 _pdbx_refine_tls.S[1][3] -0.1302 _pdbx_refine_tls.S[2][3] 0.1125 _pdbx_refine_tls.S[2][1] -0.0008 _pdbx_refine_tls.S[3][1] -0.0260 _pdbx_refine_tls.S[3][2] -0.1697 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 40 A 141 ? . . . . ? 'X-RAY DIFFRACTION' 2 1 A 1 A 6 ? . . . . ? 'X-RAY DIFFRACTION' 3 1 A 7 A 220 ? . . . . ? # loop_ _pdbx_phasing_MAD_shell.d_res_high _pdbx_phasing_MAD_shell.d_res_low _pdbx_phasing_MAD_shell.reflns_acentric _pdbx_phasing_MAD_shell.fom_acentric _pdbx_phasing_MAD_shell.reflns_centric _pdbx_phasing_MAD_shell.fom_centric _pdbx_phasing_MAD_shell.reflns _pdbx_phasing_MAD_shell.fom 8.12 19.10 101 0.579 74 0.272 175 0.450 6.02 8.12 174 0.619 71 0.313 245 0.530 5.00 6.02 234 0.560 73 0.247 307 0.486 4.36 5.00 280 0.559 71 0.147 351 0.476 3.92 4.36 310 0.565 78 0.178 388 0.487 3.59 3.92 355 0.589 73 0.144 428 0.513 3.34 3.59 391 0.604 73 0.156 464 0.534 3.13 3.34 406 0.583 80 0.189 486 0.518 2.95 3.13 447 0.569 67 0.230 514 0.525 2.80 2.95 456 0.561 67 0.219 523 0.517 2.68 2.80 506 0.529 75 0.232 581 0.491 2.56 2.68 521 0.512 79 0.197 600 0.470 2.47 2.56 544 0.455 72 0.221 616 0.427 2.38 2.47 557 0.460 75 0.165 632 0.425 2.30 2.38 584 0.403 68 0.222 652 0.384 2.23 2.30 606 0.388 76 0.173 683 0.363 2.16 2.23 619 0.348 81 0.151 700 0.325 2.10 2.16 661 0.332 68 0.213 731 0.320 # _phasing.method SAD # _phasing_MAD.entry_id 3LR0 _phasing_MAD.pdbx_d_res_high 2.10 _phasing_MAD.pdbx_d_res_low 19.10 _phasing_MAD.pdbx_reflns_acentric 7752 _phasing_MAD.pdbx_fom_acentric 0.486 _phasing_MAD.pdbx_reflns_centric 1321 _phasing_MAD.pdbx_fom_centric 0.203 _phasing_MAD.pdbx_reflns 9076 _phasing_MAD.pdbx_fom 0.444 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 9 ? A MET 1 2 1 Y 1 A ALA 10 ? A ALA 2 3 1 Y 1 A HIS 11 ? A HIS 3 4 1 Y 1 A HIS 12 ? A HIS 4 5 1 Y 1 A HIS 13 ? A HIS 5 6 1 Y 1 A HIS 14 ? A HIS 6 7 1 Y 1 A HIS 15 ? A HIS 7 8 1 Y 1 A HIS 16 ? A HIS 8 9 1 Y 1 A MET 17 ? A MET 9 10 1 Y 1 A GLY 18 ? A GLY 10 11 1 Y 1 A THR 19 ? A THR 11 12 1 Y 1 A LEU 20 ? A LEU 12 13 1 Y 1 A GLU 21 ? A GLU 13 14 1 Y 1 A ALA 22 ? A ALA 14 15 1 Y 1 A GLN 23 ? A GLN 15 16 1 Y 1 A THR 24 ? A THR 16 17 1 Y 1 A GLN 25 ? A GLN 17 18 1 Y 1 A GLY 26 ? A GLY 18 19 1 Y 1 A PRO 27 ? A PRO 19 20 1 Y 1 A GLY 28 ? A GLY 20 21 1 Y 1 A SER 29 ? A SER 21 22 1 Y 1 A MET 30 ? A MET 22 23 1 Y 1 A PHE 31 ? A PHE 23 24 1 Y 1 A ARG 32 ? A ARG 24 25 1 Y 1 A VAL 33 ? A VAL 25 26 1 Y 1 A ILE 34 ? A ILE 26 27 1 Y 1 A GLU 35 ? A GLU 27 28 1 Y 1 A ARG 36 ? A ARG 28 29 1 Y 1 A GLU 37 ? A GLU 29 30 1 Y 1 A PRO 38 ? A PRO 30 31 1 Y 1 A ARG 39 ? A ARG 31 32 1 Y 1 A ASP 142 ? A ASP 134 33 1 Y 1 A ARG 143 ? A ARG 135 34 1 Y 1 A ASP 144 ? A ASP 136 35 1 Y 1 A GLN 145 ? A GLN 137 36 1 Y 1 A LEU 146 ? A LEU 138 37 1 Y 1 A ASP 147 ? A ASP 139 38 1 Y 1 A THR 148 ? A THR 140 39 1 Y 1 A VAL 149 ? A VAL 141 40 1 Y 1 A THR 150 ? A THR 142 41 1 Y 1 A GLY 151 ? A GLY 143 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 IOD I I N N 169 LEU N N N N 170 LEU CA C N S 171 LEU C C N N 172 LEU O O N N 173 LEU CB C N N 174 LEU CG C N N 175 LEU CD1 C N N 176 LEU CD2 C N N 177 LEU OXT O N N 178 LEU H H N N 179 LEU H2 H N N 180 LEU HA H N N 181 LEU HB2 H N N 182 LEU HB3 H N N 183 LEU HG H N N 184 LEU HD11 H N N 185 LEU HD12 H N N 186 LEU HD13 H N N 187 LEU HD21 H N N 188 LEU HD22 H N N 189 LEU HD23 H N N 190 LEU HXT H N N 191 LYS N N N N 192 LYS CA C N S 193 LYS C C N N 194 LYS O O N N 195 LYS CB C N N 196 LYS CG C N N 197 LYS CD C N N 198 LYS CE C N N 199 LYS NZ N N N 200 LYS OXT O N N 201 LYS H H N N 202 LYS H2 H N N 203 LYS HA H N N 204 LYS HB2 H N N 205 LYS HB3 H N N 206 LYS HG2 H N N 207 LYS HG3 H N N 208 LYS HD2 H N N 209 LYS HD3 H N N 210 LYS HE2 H N N 211 LYS HE3 H N N 212 LYS HZ1 H N N 213 LYS HZ2 H N N 214 LYS HZ3 H N N 215 LYS HXT H N N 216 MET N N N N 217 MET CA C N S 218 MET C C N N 219 MET O O N N 220 MET CB C N N 221 MET CG C N N 222 MET SD S N N 223 MET CE C N N 224 MET OXT O N N 225 MET H H N N 226 MET H2 H N N 227 MET HA H N N 228 MET HB2 H N N 229 MET HB3 H N N 230 MET HG2 H N N 231 MET HG3 H N N 232 MET HE1 H N N 233 MET HE2 H N N 234 MET HE3 H N N 235 MET HXT H N N 236 PHE N N N N 237 PHE CA C N S 238 PHE C C N N 239 PHE O O N N 240 PHE CB C N N 241 PHE CG C Y N 242 PHE CD1 C Y N 243 PHE CD2 C Y N 244 PHE CE1 C Y N 245 PHE CE2 C Y N 246 PHE CZ C Y N 247 PHE OXT O N N 248 PHE H H N N 249 PHE H2 H N N 250 PHE HA H N N 251 PHE HB2 H N N 252 PHE HB3 H N N 253 PHE HD1 H N N 254 PHE HD2 H N N 255 PHE HE1 H N N 256 PHE HE2 H N N 257 PHE HZ H N N 258 PHE HXT H N N 259 PRO N N N N 260 PRO CA C N S 261 PRO C C N N 262 PRO O O N N 263 PRO CB C N N 264 PRO CG C N N 265 PRO CD C N N 266 PRO OXT O N N 267 PRO H H N N 268 PRO HA H N N 269 PRO HB2 H N N 270 PRO HB3 H N N 271 PRO HG2 H N N 272 PRO HG3 H N N 273 PRO HD2 H N N 274 PRO HD3 H N N 275 PRO HXT H N N 276 SER N N N N 277 SER CA C N S 278 SER C C N N 279 SER O O N N 280 SER CB C N N 281 SER OG O N N 282 SER OXT O N N 283 SER H H N N 284 SER H2 H N N 285 SER HA H N N 286 SER HB2 H N N 287 SER HB3 H N N 288 SER HG H N N 289 SER HXT H N N 290 THR N N N N 291 THR CA C N S 292 THR C C N N 293 THR O O N N 294 THR CB C N R 295 THR OG1 O N N 296 THR CG2 C N N 297 THR OXT O N N 298 THR H H N N 299 THR H2 H N N 300 THR HA H N N 301 THR HB H N N 302 THR HG1 H N N 303 THR HG21 H N N 304 THR HG22 H N N 305 THR HG23 H N N 306 THR HXT H N N 307 TRP N N N N 308 TRP CA C N S 309 TRP C C N N 310 TRP O O N N 311 TRP CB C N N 312 TRP CG C Y N 313 TRP CD1 C Y N 314 TRP CD2 C Y N 315 TRP NE1 N Y N 316 TRP CE2 C Y N 317 TRP CE3 C Y N 318 TRP CZ2 C Y N 319 TRP CZ3 C Y N 320 TRP CH2 C Y N 321 TRP OXT O N N 322 TRP H H N N 323 TRP H2 H N N 324 TRP HA H N N 325 TRP HB2 H N N 326 TRP HB3 H N N 327 TRP HD1 H N N 328 TRP HE1 H N N 329 TRP HE3 H N N 330 TRP HZ2 H N N 331 TRP HZ3 H N N 332 TRP HH2 H N N 333 TRP HXT H N N 334 TYR N N N N 335 TYR CA C N S 336 TYR C C N N 337 TYR O O N N 338 TYR CB C N N 339 TYR CG C Y N 340 TYR CD1 C Y N 341 TYR CD2 C Y N 342 TYR CE1 C Y N 343 TYR CE2 C Y N 344 TYR CZ C Y N 345 TYR OH O N N 346 TYR OXT O N N 347 TYR H H N N 348 TYR H2 H N N 349 TYR HA H N N 350 TYR HB2 H N N 351 TYR HB3 H N N 352 TYR HD1 H N N 353 TYR HD2 H N N 354 TYR HE1 H N N 355 TYR HE2 H N N 356 TYR HH H N N 357 TYR HXT H N N 358 VAL N N N N 359 VAL CA C N S 360 VAL C C N N 361 VAL O O N N 362 VAL CB C N N 363 VAL CG1 C N N 364 VAL CG2 C N N 365 VAL OXT O N N 366 VAL H H N N 367 VAL H2 H N N 368 VAL HA H N N 369 VAL HB H N N 370 VAL HG11 H N N 371 VAL HG12 H N N 372 VAL HG13 H N N 373 VAL HG21 H N N 374 VAL HG22 H N N 375 VAL HG23 H N N 376 VAL HXT H N N 377 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 THR N CA sing N N 277 THR N H sing N N 278 THR N H2 sing N N 279 THR CA C sing N N 280 THR CA CB sing N N 281 THR CA HA sing N N 282 THR C O doub N N 283 THR C OXT sing N N 284 THR CB OG1 sing N N 285 THR CB CG2 sing N N 286 THR CB HB sing N N 287 THR OG1 HG1 sing N N 288 THR CG2 HG21 sing N N 289 THR CG2 HG22 sing N N 290 THR CG2 HG23 sing N N 291 THR OXT HXT sing N N 292 TRP N CA sing N N 293 TRP N H sing N N 294 TRP N H2 sing N N 295 TRP CA C sing N N 296 TRP CA CB sing N N 297 TRP CA HA sing N N 298 TRP C O doub N N 299 TRP C OXT sing N N 300 TRP CB CG sing N N 301 TRP CB HB2 sing N N 302 TRP CB HB3 sing N N 303 TRP CG CD1 doub Y N 304 TRP CG CD2 sing Y N 305 TRP CD1 NE1 sing Y N 306 TRP CD1 HD1 sing N N 307 TRP CD2 CE2 doub Y N 308 TRP CD2 CE3 sing Y N 309 TRP NE1 CE2 sing Y N 310 TRP NE1 HE1 sing N N 311 TRP CE2 CZ2 sing Y N 312 TRP CE3 CZ3 doub Y N 313 TRP CE3 HE3 sing N N 314 TRP CZ2 CH2 doub Y N 315 TRP CZ2 HZ2 sing N N 316 TRP CZ3 CH2 sing Y N 317 TRP CZ3 HZ3 sing N N 318 TRP CH2 HH2 sing N N 319 TRP OXT HXT sing N N 320 TYR N CA sing N N 321 TYR N H sing N N 322 TYR N H2 sing N N 323 TYR CA C sing N N 324 TYR CA CB sing N N 325 TYR CA HA sing N N 326 TYR C O doub N N 327 TYR C OXT sing N N 328 TYR CB CG sing N N 329 TYR CB HB2 sing N N 330 TYR CB HB3 sing N N 331 TYR CG CD1 doub Y N 332 TYR CG CD2 sing Y N 333 TYR CD1 CE1 sing Y N 334 TYR CD1 HD1 sing N N 335 TYR CD2 CE2 doub Y N 336 TYR CD2 HD2 sing N N 337 TYR CE1 CZ doub Y N 338 TYR CE1 HE1 sing N N 339 TYR CE2 CZ sing Y N 340 TYR CE2 HE2 sing N N 341 TYR CZ OH sing N N 342 TYR OH HH sing N N 343 TYR OXT HXT sing N N 344 VAL N CA sing N N 345 VAL N H sing N N 346 VAL N H2 sing N N 347 VAL CA C sing N N 348 VAL CA CB sing N N 349 VAL CA HA sing N N 350 VAL C O doub N N 351 VAL C OXT sing N N 352 VAL CB CG1 sing N N 353 VAL CB CG2 sing N N 354 VAL CB HB sing N N 355 VAL CG1 HG11 sing N N 356 VAL CG1 HG12 sing N N 357 VAL CG1 HG13 sing N N 358 VAL CG2 HG21 sing N N 359 VAL CG2 HG22 sing N N 360 VAL CG2 HG23 sing N N 361 VAL OXT HXT sing N N 362 # _atom_sites.entry_id 3LR0 _atom_sites.fract_transf_matrix[1][1] 0.017135 _atom_sites.fract_transf_matrix[1][2] 0.009893 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019786 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013212 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C I N O # loop_