data_3LRA # _entry.id 3LRA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3LRA pdb_00003lra 10.2210/pdb3lra/pdb RCSB RCSB057631 ? ? WWPDB D_1000057631 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-11-17 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-06-28 4 'Structure model' 1 3 2024-03-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Source and taxonomy' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' entity_src_gen 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' struct_ref_seq # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq.db_align_beg' 4 4 'Structure model' '_struct_ref_seq.db_align_end' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3LRA _pdbx_database_status.recvd_initial_deposition_date 2010-02-10 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Yang, X.' 1 'Xie, X.' 2 'Shen, Y.' 3 'Long, J.' 4 # _citation.id primary _citation.title 'Structural basis for tandem L27 domain-mediated polymerization' _citation.journal_abbrev 'Faseb J.' _citation.journal_volume 24 _citation.page_first 4806 _citation.page_last 4815 _citation.year 2010 _citation.journal_id_ASTM FAJOEC _citation.country US _citation.journal_id_ISSN 0892-6638 _citation.journal_id_CSD 2074 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20702775 _citation.pdbx_database_id_DOI 10.1096/fj.10-163857 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yang, X.' 1 ? primary 'Xie, X.' 2 ? primary 'Chen, L.' 3 ? primary 'Zhou, H.' 4 ? primary 'Wang, Z.' 5 ? primary 'Zhao, W.' 6 ? primary 'Tian, R.' 7 ? primary 'Zhang, R.' 8 ? primary 'Tian, C.' 9 ? primary 'Long, J.' 10 ? primary 'Shen, Y.' 11 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Disks large homolog 1, MAGUK p55 subfamily member 7, Protein lin-7 homolog C' 29164.166 1 ? ? 'L27 domain, L27 1/2 domain' 'Structural Basis for Assembling a Tripartite Complex Dlg1-MPP7-Mals3' 2 water nat water 18.015 41 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Dlg1, Synapse-associated protein 97, SAP-97, SAP97, hDlg, MPP7, MALS-3, Lin-7C, Mammalian lin-seven protein 3, Vertebrate lin-7 homolog 3, Veli-3 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;PVRKQDTQRALHLLEEYRSKLSQTEDRQLRSSIERVINIFQSNLFQALIDIQEFYEVTLLDNPKLEVLFQGPGSDTGLYE LLAALPAQLQPHVDSQEDLTFLWDMFGEKSLHSLVKIHEKLHYYEKQSPVPILHGAAALADDLAEELQNKPLNSEIRELL KLLSKPNVKALLSVHDTVAQKNYDLEVLFQGPALGEPVRLERDICRAIELLEKLQRSGEVPPQKLQALQRVLQSEFCNAV REVYEHVYETVDIS ; _entity_poly.pdbx_seq_one_letter_code_can ;PVRKQDTQRALHLLEEYRSKLSQTEDRQLRSSIERVINIFQSNLFQALIDIQEFYEVTLLDNPKLEVLFQGPGSDTGLYE LLAALPAQLQPHVDSQEDLTFLWDMFGEKSLHSLVKIHEKLHYYEKQSPVPILHGAAALADDLAEELQNKPLNSEIRELL KLLSKPNVKALLSVHDTVAQKNYDLEVLFQGPALGEPVRLERDICRAIELLEKLQRSGEVPPQKLQALQRVLQSEFCNAV REVYEHVYETVDIS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 VAL n 1 3 ARG n 1 4 LYS n 1 5 GLN n 1 6 ASP n 1 7 THR n 1 8 GLN n 1 9 ARG n 1 10 ALA n 1 11 LEU n 1 12 HIS n 1 13 LEU n 1 14 LEU n 1 15 GLU n 1 16 GLU n 1 17 TYR n 1 18 ARG n 1 19 SER n 1 20 LYS n 1 21 LEU n 1 22 SER n 1 23 GLN n 1 24 THR n 1 25 GLU n 1 26 ASP n 1 27 ARG n 1 28 GLN n 1 29 LEU n 1 30 ARG n 1 31 SER n 1 32 SER n 1 33 ILE n 1 34 GLU n 1 35 ARG n 1 36 VAL n 1 37 ILE n 1 38 ASN n 1 39 ILE n 1 40 PHE n 1 41 GLN n 1 42 SER n 1 43 ASN n 1 44 LEU n 1 45 PHE n 1 46 GLN n 1 47 ALA n 1 48 LEU n 1 49 ILE n 1 50 ASP n 1 51 ILE n 1 52 GLN n 1 53 GLU n 1 54 PHE n 1 55 TYR n 1 56 GLU n 1 57 VAL n 1 58 THR n 1 59 LEU n 1 60 LEU n 1 61 ASP n 1 62 ASN n 1 63 PRO n 1 64 LYS n 1 65 LEU n 1 66 GLU n 1 67 VAL n 1 68 LEU n 1 69 PHE n 1 70 GLN n 1 71 GLY n 1 72 PRO n 1 73 GLY n 1 74 SER n 1 75 ASP n 1 76 THR n 1 77 GLY n 1 78 LEU n 1 79 TYR n 1 80 GLU n 1 81 LEU n 1 82 LEU n 1 83 ALA n 1 84 ALA n 1 85 LEU n 1 86 PRO n 1 87 ALA n 1 88 GLN n 1 89 LEU n 1 90 GLN n 1 91 PRO n 1 92 HIS n 1 93 VAL n 1 94 ASP n 1 95 SER n 1 96 GLN n 1 97 GLU n 1 98 ASP n 1 99 LEU n 1 100 THR n 1 101 PHE n 1 102 LEU n 1 103 TRP n 1 104 ASP n 1 105 MET n 1 106 PHE n 1 107 GLY n 1 108 GLU n 1 109 LYS n 1 110 SER n 1 111 LEU n 1 112 HIS n 1 113 SER n 1 114 LEU n 1 115 VAL n 1 116 LYS n 1 117 ILE n 1 118 HIS n 1 119 GLU n 1 120 LYS n 1 121 LEU n 1 122 HIS n 1 123 TYR n 1 124 TYR n 1 125 GLU n 1 126 LYS n 1 127 GLN n 1 128 SER n 1 129 PRO n 1 130 VAL n 1 131 PRO n 1 132 ILE n 1 133 LEU n 1 134 HIS n 1 135 GLY n 1 136 ALA n 1 137 ALA n 1 138 ALA n 1 139 LEU n 1 140 ALA n 1 141 ASP n 1 142 ASP n 1 143 LEU n 1 144 ALA n 1 145 GLU n 1 146 GLU n 1 147 LEU n 1 148 GLN n 1 149 ASN n 1 150 LYS n 1 151 PRO n 1 152 LEU n 1 153 ASN n 1 154 SER n 1 155 GLU n 1 156 ILE n 1 157 ARG n 1 158 GLU n 1 159 LEU n 1 160 LEU n 1 161 LYS n 1 162 LEU n 1 163 LEU n 1 164 SER n 1 165 LYS n 1 166 PRO n 1 167 ASN n 1 168 VAL n 1 169 LYS n 1 170 ALA n 1 171 LEU n 1 172 LEU n 1 173 SER n 1 174 VAL n 1 175 HIS n 1 176 ASP n 1 177 THR n 1 178 VAL n 1 179 ALA n 1 180 GLN n 1 181 LYS n 1 182 ASN n 1 183 TYR n 1 184 ASP n 1 185 LEU n 1 186 GLU n 1 187 VAL n 1 188 LEU n 1 189 PHE n 1 190 GLN n 1 191 GLY n 1 192 PRO n 1 193 ALA n 1 194 LEU n 1 195 GLY n 1 196 GLU n 1 197 PRO n 1 198 VAL n 1 199 ARG n 1 200 LEU n 1 201 GLU n 1 202 ARG n 1 203 ASP n 1 204 ILE n 1 205 CYS n 1 206 ARG n 1 207 ALA n 1 208 ILE n 1 209 GLU n 1 210 LEU n 1 211 LEU n 1 212 GLU n 1 213 LYS n 1 214 LEU n 1 215 GLN n 1 216 ARG n 1 217 SER n 1 218 GLY n 1 219 GLU n 1 220 VAL n 1 221 PRO n 1 222 PRO n 1 223 GLN n 1 224 LYS n 1 225 LEU n 1 226 GLN n 1 227 ALA n 1 228 LEU n 1 229 GLN n 1 230 ARG n 1 231 VAL n 1 232 LEU n 1 233 GLN n 1 234 SER n 1 235 GLU n 1 236 PHE n 1 237 CYS n 1 238 ASN n 1 239 ALA n 1 240 VAL n 1 241 ARG n 1 242 GLU n 1 243 VAL n 1 244 TYR n 1 245 GLU n 1 246 HIS n 1 247 VAL n 1 248 TYR n 1 249 GLU n 1 250 THR n 1 251 VAL n 1 252 ASP n 1 253 ILE n 1 254 SER n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? 1 64 human ? 'L27 domains of Dlg1, MPP7 and Mals3' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? Plasmid ? ? ? 'pET32a vector (Novagen)' ;in-house-modified version of the pET32a vector (Novagen), in which the S-tag an d the thrombin recognition site were replaced by a sequence encoding a TEV prote ase cleavage site (Glu-Asn-Leu-Tyr-Phe-Gln-Ser) ; ? 1 2 sample ? 73 184 human ? 'L27 domains of Dlg1, MPP7 and Mals3' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? Plasmid ? ? ? 'pET32a vector (Novagen)' ;in-house-modified version of the pET32a vector (Novagen), in which the S-tag an d the thrombin recognition site were replaced by a sequence encoding a TEV prote ase cleavage site (Glu-Asn-Leu-Tyr-Phe-Gln-Ser) ; ? 1 3 sample ? 193 254 human ? 'L27 domains of Dlg1, MPP7 and Mals3' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? Plasmid ? ? ? 'pET32a vector (Novagen)' ;in-house-modified version of the pET32a vector (Novagen), in which the S-tag an d the thrombin recognition site were replaced by a sequence encoding a TEV prote ase cleavage site (Glu-Asn-Leu-Tyr-Phe-Gln-Ser) ; ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 2 2 PRO PRO A . n A 1 2 VAL 2 3 3 VAL VAL A . n A 1 3 ARG 3 4 4 ARG ARG A . n A 1 4 LYS 4 5 5 LYS LYS A . n A 1 5 GLN 5 6 6 GLN GLN A . n A 1 6 ASP 6 7 7 ASP ASP A . n A 1 7 THR 7 8 8 THR THR A . n A 1 8 GLN 8 9 9 GLN GLN A . n A 1 9 ARG 9 10 10 ARG ARG A . n A 1 10 ALA 10 11 11 ALA ALA A . n A 1 11 LEU 11 12 12 LEU LEU A . n A 1 12 HIS 12 13 13 HIS HIS A . n A 1 13 LEU 13 14 14 LEU LEU A . n A 1 14 LEU 14 15 15 LEU LEU A . n A 1 15 GLU 15 16 16 GLU GLU A . n A 1 16 GLU 16 17 17 GLU GLU A . n A 1 17 TYR 17 18 18 TYR TYR A . n A 1 18 ARG 18 19 19 ARG ARG A . n A 1 19 SER 19 20 20 SER SER A . n A 1 20 LYS 20 21 21 LYS LYS A . n A 1 21 LEU 21 22 22 LEU LEU A . n A 1 22 SER 22 23 23 SER SER A . n A 1 23 GLN 23 24 24 GLN GLN A . n A 1 24 THR 24 25 25 THR THR A . n A 1 25 GLU 25 26 26 GLU GLU A . n A 1 26 ASP 26 27 27 ASP ASP A . n A 1 27 ARG 27 28 28 ARG ARG A . n A 1 28 GLN 28 29 29 GLN GLN A . n A 1 29 LEU 29 30 30 LEU LEU A . n A 1 30 ARG 30 31 31 ARG ARG A . n A 1 31 SER 31 32 32 SER SER A . n A 1 32 SER 32 33 33 SER SER A . n A 1 33 ILE 33 34 34 ILE ILE A . n A 1 34 GLU 34 35 35 GLU GLU A . n A 1 35 ARG 35 36 36 ARG ARG A . n A 1 36 VAL 36 37 37 VAL VAL A . n A 1 37 ILE 37 38 38 ILE ILE A . n A 1 38 ASN 38 39 39 ASN SER A . n A 1 39 ILE 39 40 40 ILE ILE A . n A 1 40 PHE 40 41 41 PHE PHE A . n A 1 41 GLN 41 42 42 GLN GLN A . n A 1 42 SER 42 43 43 SER SER A . n A 1 43 ASN 43 44 44 ASN ASN A . n A 1 44 LEU 44 45 45 LEU LEU A . n A 1 45 PHE 45 46 46 PHE PHE A . n A 1 46 GLN 46 47 47 GLN GLN A . n A 1 47 ALA 47 48 48 ALA ALA A . n A 1 48 LEU 48 49 49 LEU LEU A . n A 1 49 ILE 49 50 50 ILE ILE A . n A 1 50 ASP 50 51 51 ASP ASP A . n A 1 51 ILE 51 52 52 ILE ILE A . n A 1 52 GLN 52 53 53 GLN GLN A . n A 1 53 GLU 53 54 54 GLU GLU A . n A 1 54 PHE 54 55 55 PHE PHE A . n A 1 55 TYR 55 56 56 TYR TYR A . n A 1 56 GLU 56 57 57 GLU GLU A . n A 1 57 VAL 57 58 58 VAL VAL A . n A 1 58 THR 58 59 59 THR THR A . n A 1 59 LEU 59 60 60 LEU LEU A . n A 1 60 LEU 60 61 61 LEU LEU A . n A 1 61 ASP 61 62 62 ASP ASP A . n A 1 62 ASN 62 63 63 ASN ASN A . n A 1 63 PRO 63 64 64 PRO PRO A . n A 1 64 LYS 64 65 65 LYS LYS A . n A 1 65 LEU 65 66 66 LEU LEU A . n A 1 66 GLU 66 67 67 GLU GLU A . n A 1 67 VAL 67 68 68 VAL VAL A . n A 1 68 LEU 68 69 69 LEU LEU A . n A 1 69 PHE 69 70 70 PHE PHE A . n A 1 70 GLN 70 71 71 GLN GLN A . n A 1 71 GLY 71 72 72 GLY GLY A . n A 1 72 PRO 72 73 73 PRO PRO A . n A 1 73 GLY 73 74 74 GLY GLY A . n A 1 74 SER 74 75 75 SER SER A . n A 1 75 ASP 75 76 76 ASP ASP A . n A 1 76 THR 76 77 77 THR THR A . n A 1 77 GLY 77 78 78 GLY GLY A . n A 1 78 LEU 78 79 79 LEU LEU A . n A 1 79 TYR 79 80 80 TYR TYR A . n A 1 80 GLU 80 81 81 GLU GLU A . n A 1 81 LEU 81 82 82 LEU LEU A . n A 1 82 LEU 82 83 83 LEU LEU A . n A 1 83 ALA 83 84 84 ALA ALA A . n A 1 84 ALA 84 85 85 ALA ALA A . n A 1 85 LEU 85 86 86 LEU LEU A . n A 1 86 PRO 86 87 87 PRO PRO A . n A 1 87 ALA 87 88 88 ALA ALA A . n A 1 88 GLN 88 89 89 GLN GLN A . n A 1 89 LEU 89 90 90 LEU LEU A . n A 1 90 GLN 90 91 91 GLN GLN A . n A 1 91 PRO 91 92 92 PRO PRO A . n A 1 92 HIS 92 93 93 HIS HIS A . n A 1 93 VAL 93 94 94 VAL VAL A . n A 1 94 ASP 94 95 95 ASP ASP A . n A 1 95 SER 95 96 96 SER SER A . n A 1 96 GLN 96 97 97 GLN GLN A . n A 1 97 GLU 97 98 98 GLU GLU A . n A 1 98 ASP 98 99 99 ASP ASP A . n A 1 99 LEU 99 100 100 LEU LEU A . n A 1 100 THR 100 101 101 THR THR A . n A 1 101 PHE 101 102 102 PHE PHE A . n A 1 102 LEU 102 103 103 LEU LEU A . n A 1 103 TRP 103 104 104 TRP TRP A . n A 1 104 ASP 104 105 105 ASP ASP A . n A 1 105 MET 105 106 106 MET MET A . n A 1 106 PHE 106 107 107 PHE PHE A . n A 1 107 GLY 107 108 ? ? ? A . n A 1 108 GLU 108 109 ? ? ? A . n A 1 109 LYS 109 110 ? ? ? A . n A 1 110 SER 110 111 111 SER SER A . n A 1 111 LEU 111 112 112 LEU LEU A . n A 1 112 HIS 112 113 113 HIS HIS A . n A 1 113 SER 113 114 114 SER SER A . n A 1 114 LEU 114 115 115 LEU LEU A . n A 1 115 VAL 115 116 116 VAL VAL A . n A 1 116 LYS 116 117 117 LYS LYS A . n A 1 117 ILE 117 118 118 ILE ILE A . n A 1 118 HIS 118 119 119 HIS HIS A . n A 1 119 GLU 119 120 120 GLU GLU A . n A 1 120 LYS 120 121 121 LYS LYS A . n A 1 121 LEU 121 122 122 LEU LEU A . n A 1 122 HIS 122 123 123 HIS HIS A . n A 1 123 TYR 123 124 124 TYR TYR A . n A 1 124 TYR 124 125 125 TYR TYR A . n A 1 125 GLU 125 126 126 GLU GLU A . n A 1 126 LYS 126 127 127 LYS LYS A . n A 1 127 GLN 127 128 128 GLN GLN A . n A 1 128 SER 128 129 129 SER SER A . n A 1 129 PRO 129 130 130 PRO PRO A . n A 1 130 VAL 130 131 131 VAL VAL A . n A 1 131 PRO 131 132 132 PRO PRO A . n A 1 132 ILE 132 133 133 ILE ILE A . n A 1 133 LEU 133 134 134 LEU LEU A . n A 1 134 HIS 134 135 135 HIS HIS A . n A 1 135 GLY 135 136 136 GLY GLY A . n A 1 136 ALA 136 137 137 ALA ALA A . n A 1 137 ALA 137 138 138 ALA ALA A . n A 1 138 ALA 138 139 139 ALA ALA A . n A 1 139 LEU 139 140 140 LEU LEU A . n A 1 140 ALA 140 141 141 ALA ALA A . n A 1 141 ASP 141 142 142 ASP ASP A . n A 1 142 ASP 142 143 143 ASP ASP A . n A 1 143 LEU 143 144 144 LEU LEU A . n A 1 144 ALA 144 145 145 ALA ALA A . n A 1 145 GLU 145 146 146 GLU GLU A . n A 1 146 GLU 146 147 147 GLU GLU A . n A 1 147 LEU 147 148 148 LEU LEU A . n A 1 148 GLN 148 149 149 GLN GLN A . n A 1 149 ASN 149 150 150 ASN ASN A . n A 1 150 LYS 150 151 151 LYS LYS A . n A 1 151 PRO 151 152 152 PRO PRO A . n A 1 152 LEU 152 153 153 LEU LEU A . n A 1 153 ASN 153 154 154 ASN ASN A . n A 1 154 SER 154 155 155 SER SER A . n A 1 155 GLU 155 156 156 GLU GLU A . n A 1 156 ILE 156 157 157 ILE ILE A . n A 1 157 ARG 157 158 158 ARG ARG A . n A 1 158 GLU 158 159 159 GLU GLU A . n A 1 159 LEU 159 160 160 LEU LEU A . n A 1 160 LEU 160 161 161 LEU LEU A . n A 1 161 LYS 161 162 162 LYS LYS A . n A 1 162 LEU 162 163 163 LEU LEU A . n A 1 163 LEU 163 164 164 LEU LEU A . n A 1 164 SER 164 165 165 SER SER A . n A 1 165 LYS 165 166 166 LYS LYS A . n A 1 166 PRO 166 167 167 PRO PRO A . n A 1 167 ASN 167 168 168 ASN ASN A . n A 1 168 VAL 168 169 169 VAL VAL A . n A 1 169 LYS 169 170 170 LYS LYS A . n A 1 170 ALA 170 171 171 ALA ALA A . n A 1 171 LEU 171 172 172 LEU LEU A . n A 1 172 LEU 172 173 173 LEU LEU A . n A 1 173 SER 173 174 174 SER SER A . n A 1 174 VAL 174 175 175 VAL VAL A . n A 1 175 HIS 175 176 176 HIS HIS A . n A 1 176 ASP 176 177 177 ASP ASP A . n A 1 177 THR 177 178 178 THR THR A . n A 1 178 VAL 178 179 179 VAL VAL A . n A 1 179 ALA 179 180 180 ALA ALA A . n A 1 180 GLN 180 181 181 GLN GLN A . n A 1 181 LYS 181 182 182 LYS LYS A . n A 1 182 ASN 182 183 183 ASN ASN A . n A 1 183 TYR 183 184 184 TYR TYR A . n A 1 184 ASP 184 185 185 ASP ASP A . n A 1 185 LEU 185 186 186 LEU LEU A . n A 1 186 GLU 186 187 187 GLU GLU A . n A 1 187 VAL 187 188 188 VAL VAL A . n A 1 188 LEU 188 189 189 LEU LEU A . n A 1 189 PHE 189 190 190 PHE PHE A . n A 1 190 GLN 190 191 191 GLN GLN A . n A 1 191 GLY 191 192 192 GLY GLY A . n A 1 192 PRO 192 193 193 PRO PRO A . n A 1 193 ALA 193 194 194 ALA ALA A . n A 1 194 LEU 194 195 195 LEU LEU A . n A 1 195 GLY 195 196 196 GLY GLY A . n A 1 196 GLU 196 197 197 GLU GLU A . n A 1 197 PRO 197 198 198 PRO PRO A . n A 1 198 VAL 198 199 199 VAL VAL A . n A 1 199 ARG 199 200 200 ARG ARG A . n A 1 200 LEU 200 201 201 LEU LEU A . n A 1 201 GLU 201 202 202 GLU GLU A . n A 1 202 ARG 202 203 203 ARG ARG A . n A 1 203 ASP 203 204 204 ASP ASP A . n A 1 204 ILE 204 205 205 ILE ILE A . n A 1 205 CYS 205 206 206 CYS CYS A . n A 1 206 ARG 206 207 207 ARG ARG A . n A 1 207 ALA 207 208 208 ALA ALA A . n A 1 208 ILE 208 209 209 ILE ILE A . n A 1 209 GLU 209 210 210 GLU GLU A . n A 1 210 LEU 210 211 211 LEU LEU A . n A 1 211 LEU 211 212 212 LEU LEU A . n A 1 212 GLU 212 213 213 GLU GLU A . n A 1 213 LYS 213 214 214 LYS LYS A . n A 1 214 LEU 214 215 215 LEU LEU A . n A 1 215 GLN 215 216 216 GLN GLN A . n A 1 216 ARG 216 217 217 ARG ARG A . n A 1 217 SER 217 218 218 SER SER A . n A 1 218 GLY 218 219 219 GLY GLY A . n A 1 219 GLU 219 220 220 GLU GLU A . n A 1 220 VAL 220 221 221 VAL VAL A . n A 1 221 PRO 221 222 222 PRO PRO A . n A 1 222 PRO 222 223 223 PRO PRO A . n A 1 223 GLN 223 224 224 GLN GLN A . n A 1 224 LYS 224 225 225 LYS LYS A . n A 1 225 LEU 225 226 226 LEU LEU A . n A 1 226 GLN 226 227 227 GLN GLN A . n A 1 227 ALA 227 228 228 ALA ALA A . n A 1 228 LEU 228 229 229 LEU LEU A . n A 1 229 GLN 229 230 230 GLN GLN A . n A 1 230 ARG 230 231 231 ARG ARG A . n A 1 231 VAL 231 232 232 VAL VAL A . n A 1 232 LEU 232 233 233 LEU LEU A . n A 1 233 GLN 233 234 234 GLN GLN A . n A 1 234 SER 234 235 235 SER SER A . n A 1 235 GLU 235 236 236 GLU GLU A . n A 1 236 PHE 236 237 237 PHE PHE A . n A 1 237 CYS 237 238 238 CYS CYS A . n A 1 238 ASN 238 239 239 ASN ASN A . n A 1 239 ALA 239 240 240 ALA ALA A . n A 1 240 VAL 240 241 241 VAL VAL A . n A 1 241 ARG 241 242 242 ARG ARG A . n A 1 242 GLU 242 243 243 GLU GLU A . n A 1 243 VAL 243 244 244 VAL VAL A . n A 1 244 TYR 244 245 245 TYR TYR A . n A 1 245 GLU 245 246 246 GLU GLU A . n A 1 246 HIS 246 247 247 HIS HIS A . n A 1 247 VAL 247 248 248 VAL VAL A . n A 1 248 TYR 248 249 249 TYR TYR A . n A 1 249 GLU 249 250 250 GLU GLU A . n A 1 250 THR 250 251 251 THR THR A . n A 1 251 VAL 251 252 252 VAL VAL A . n A 1 252 ASP 252 253 253 ASP ASP A . n A 1 253 ILE 253 254 254 ILE ILE A . n A 1 254 SER 254 255 255 SER SER A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 256 3 HOH HOH A . B 2 HOH 2 257 4 HOH HOH A . B 2 HOH 3 258 5 HOH HOH A . B 2 HOH 4 259 6 HOH HOH A . B 2 HOH 5 260 7 HOH HOH A . B 2 HOH 6 261 8 HOH HOH A . B 2 HOH 7 262 9 HOH HOH A . B 2 HOH 8 263 10 HOH HOH A . B 2 HOH 9 264 11 HOH HOH A . B 2 HOH 10 265 12 HOH HOH A . B 2 HOH 11 266 13 HOH HOH A . B 2 HOH 12 267 22 HOH HOH A . B 2 HOH 13 268 25 HOH HOH A . B 2 HOH 14 269 26 HOH HOH A . B 2 HOH 15 270 27 HOH HOH A . B 2 HOH 16 271 28 HOH HOH A . B 2 HOH 17 272 29 HOH HOH A . B 2 HOH 18 273 30 HOH HOH A . B 2 HOH 19 274 31 HOH HOH A . B 2 HOH 20 275 32 HOH HOH A . B 2 HOH 21 276 33 HOH HOH A . B 2 HOH 22 277 34 HOH HOH A . B 2 HOH 23 278 35 HOH HOH A . B 2 HOH 24 279 36 HOH HOH A . B 2 HOH 25 280 37 HOH HOH A . B 2 HOH 26 281 38 HOH HOH A . B 2 HOH 27 282 39 HOH HOH A . B 2 HOH 28 283 40 HOH HOH A . B 2 HOH 29 284 41 HOH HOH A . B 2 HOH 30 285 42 HOH HOH A . B 2 HOH 31 286 43 HOH HOH A . B 2 HOH 32 287 44 HOH HOH A . B 2 HOH 33 288 45 HOH HOH A . B 2 HOH 34 289 46 HOH HOH A . B 2 HOH 35 290 47 HOH HOH A . B 2 HOH 36 291 48 HOH HOH A . B 2 HOH 37 292 49 HOH HOH A . B 2 HOH 38 293 50 HOH HOH A . B 2 HOH 39 294 51 HOH HOH A . B 2 HOH 40 295 52 HOH HOH A . B 2 HOH 41 296 54 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASN 39 ? OD1 ? A ASN 38 OD1 2 1 Y 1 A ASN 39 ? ND2 ? A ASN 38 ND2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 SHELXS phasing . ? 2 CNS refinement 1.2 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _cell.entry_id 3LRA _cell.length_a 153.190 _cell.length_b 153.190 _cell.length_c 58.903 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3LRA _symmetry.space_group_name_H-M 'P 62 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3LRA _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 2 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.42 _exptl_crystal.density_percent_sol 64.04 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details '10% PEG 8000, 0.2M MgCl2, 0.1M Guanidine HCl, 0.1M Tris-HCl, pH7.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 100 ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 CCD 'MAR CCD 165 mm' 2008-12-30 ? 2 CCD 'ADSC QUANTUM 315' 2008-11-01 ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_scattering_type 1 1 M 'Si 111 CHANNEL' 'SINGLE WAVELENGTH' x-ray 2 1 M 'SAGITALLY FOCUSED Si(111)' 'SINGLE WAVELENGTH' x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.0000 1.0 2 0.9791 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list 1 SYNCHROTRON 'BSRF BEAMLINE 3W1A' BSRF 3W1A ? 1.0000 2 SYNCHROTRON 'APS BEAMLINE 19-ID' APS 19-ID ? 0.9791 # _reflns.entry_id 3LRA _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 5.0 _reflns.d_resolution_low 38.3 _reflns.d_resolution_high 2.95 _reflns.number_obs 8045 _reflns.number_all 8504 _reflns.percent_possible_obs 95 _reflns.pdbx_Rmerge_I_obs 0.092 _reflns.pdbx_Rsym_value 0.092 _reflns.pdbx_netI_over_sigmaI 25.7 _reflns.B_iso_Wilson_estimate 1.2 _reflns.pdbx_redundancy 14.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1,2 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.95 _reflns_shell.d_res_low 3.06 _reflns_shell.percent_possible_all 77.7 _reflns_shell.Rmerge_I_obs 0.435 _reflns_shell.pdbx_Rsym_value 0.435 _reflns_shell.meanI_over_sigI_obs 2.1 _reflns_shell.pdbx_redundancy 4.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1047 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3LRA _refine.ls_number_reflns_obs 8045 _refine.ls_number_reflns_all 8504 _refine.pdbx_ls_sigma_I 2.0 _refine.pdbx_ls_sigma_F 5.0 _refine.pdbx_data_cutoff_high_absF 52963.05 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 38.30 _refine.ls_d_res_high 2.95 _refine.ls_percent_reflns_obs 94.6 _refine.ls_R_factor_obs 0.255 _refine.ls_R_factor_all 0.257 _refine.ls_R_factor_R_work 0.255 _refine.ls_R_factor_R_free 0.284 _refine.ls_R_factor_R_free_error 0.013 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.6 _refine.ls_number_reflns_R_free 472 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 67.2 _refine.aniso_B[1][1] 8.62 _refine.aniso_B[2][2] 8.62 _refine.aniso_B[3][3] -17.24 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.35 _refine.solvent_model_param_bsol 52.039 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'BULK SOLVENT MODEL USED' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3LRA _refine_analyze.Luzzati_coordinate_error_obs 0.43 _refine_analyze.Luzzati_sigma_a_obs 0.47 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.53 _refine_analyze.Luzzati_sigma_a_free 0.59 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2032 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 41 _refine_hist.number_atoms_total 2073 _refine_hist.d_res_high 2.95 _refine_hist.d_res_low 38.30 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.008 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.3 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 19.3 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.94 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.47 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.61 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.92 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.15 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.95 _refine_ls_shell.d_res_low 3.06 _refine_ls_shell.number_reflns_R_work 1047 _refine_ls_shell.R_factor_R_work 0.338 _refine_ls_shell.percent_reflns_obs 77.1 _refine_ls_shell.R_factor_R_free 0.373 _refine_ls_shell.R_factor_R_free_error 0.047 _refine_ls_shell.percent_reflns_R_free 5.7 _refine_ls_shell.number_reflns_R_free 63 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 679 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 water_rep.param water.top # _database_PDB_matrix.entry_id 3LRA _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3LRA _struct.title 'Structural Basis for Assembling a Human Tripartite Complex Dlg1-MPP7-Mals3' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3LRA _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' _struct_keywords.text ;Tripartite Complex, L27 tetramer, Cell junction, Cell membrane, Endoplasmic reticulum, Host-virus interaction, Postsynaptic cell membrane, SH3 domain, Synapse, Tight junction, Exocytosis, Protein transport, Synaptosome, Transport, Membrane Protein ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP DLG1_HUMAN Q12959 1 PVRKQDTQRALHLLEEYRSKLSQTEDRQLRSSIERVINIFQSNLFQALIDIQEFYEVTLLDNPK 2 ? 2 PDB 3LRA 3LRA 1 LEVLFQGP 1 ? 3 UNP MPP7_HUMAN Q5T2T1 1 ;GSDTGLYELLAALPAQLQPHVDSQEDLTFLWDMFGEKSLHSLVKIHEKLHYYEKQSPVPILHGAAALADDLAEELQNKPL NSEIRELLKLLSKPNVKALLSVHDTVAQKNYD ; 9 ? 4 UNP LIN7C_HUMAN Q9NUP9 1 ALGEPVRLERDICRAIELLEKLQRSGEVPPQKLQALQRVLQSEFCNAVREVYEHVYETVDIS 3 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3LRA A 1 ? 64 ? Q12959 2 ? 65 ? 2 65 2 2 3LRA A 65 ? 72 ? 3LRA 66 ? 73 ? 66 73 3 3 3LRA A 73 ? 184 ? Q5T2T1 9 ? 120 ? 74 185 4 2 3LRA A 185 ? 192 ? 3LRA 186 ? 193 ? 186 193 5 4 3LRA A 193 ? 254 ? Q9NUP9 3 ? 64 ? 194 255 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 3 ? LYS A 20 ? ARG A 4 LYS A 21 1 ? 18 HELX_P HELX_P2 2 GLN A 28 ? SER A 42 ? GLN A 29 SER A 43 1 ? 15 HELX_P HELX_P3 3 SER A 42 ? TYR A 55 ? SER A 43 TYR A 56 1 ? 14 HELX_P HELX_P4 4 ASN A 62 ? GLN A 70 ? ASN A 63 GLN A 71 5 ? 9 HELX_P HELX_P5 5 GLY A 77 ? ALA A 84 ? GLY A 78 ALA A 85 1 ? 8 HELX_P HELX_P6 6 ALA A 84 ? GLN A 90 ? ALA A 85 GLN A 91 1 ? 7 HELX_P HELX_P7 7 GLU A 97 ? PHE A 106 ? GLU A 98 PHE A 107 1 ? 10 HELX_P HELX_P8 8 SER A 110 ? LYS A 126 ? SER A 111 LYS A 127 1 ? 17 HELX_P HELX_P9 9 GLY A 135 ? ASN A 149 ? GLY A 136 ASN A 150 1 ? 15 HELX_P HELX_P10 10 ASN A 153 ? LEU A 163 ? ASN A 154 LEU A 164 1 ? 11 HELX_P HELX_P11 11 LYS A 165 ? GLN A 180 ? LYS A 166 GLN A 181 1 ? 16 HELX_P HELX_P12 12 ASP A 184 ? GLN A 190 ? ASP A 185 GLN A 191 1 ? 7 HELX_P HELX_P13 13 GLN A 190 ? GLY A 195 ? GLN A 191 GLY A 196 1 ? 6 HELX_P HELX_P14 14 GLU A 196 ? SER A 217 ? GLU A 197 SER A 218 1 ? 22 HELX_P HELX_P15 15 PRO A 222 ? SER A 234 ? PRO A 223 SER A 235 1 ? 13 HELX_P HELX_P16 16 SER A 234 ? VAL A 251 ? SER A 235 VAL A 252 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id VAL _struct_mon_prot_cis.label_seq_id 220 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id VAL _struct_mon_prot_cis.auth_seq_id 221 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 221 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 222 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -2.38 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASP _pdbx_validate_close_contact.auth_seq_id_1 76 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 N _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 GLY _pdbx_validate_close_contact.auth_seq_id_2 78 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.10 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 OE1 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 GLN _pdbx_validate_symm_contact.auth_seq_id_1 181 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 OE1 _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 GLN _pdbx_validate_symm_contact.auth_seq_id_2 181 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 8_557 _pdbx_validate_symm_contact.dist 2.15 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 21 ? ? -71.67 25.05 2 1 SER A 23 ? ? -121.20 -70.08 3 1 GLN A 24 ? ? -154.68 -13.43 4 1 GLN A 29 ? ? -131.22 -54.48 5 1 GLU A 57 ? ? 31.48 73.20 6 1 PRO A 73 ? ? -57.41 107.72 7 1 SER A 75 ? ? -104.84 -89.99 8 1 ASP A 76 ? ? -78.70 24.01 9 1 THR A 77 ? ? -34.34 -6.38 10 1 LEU A 82 ? ? -34.66 -73.64 11 1 ASN A 150 ? ? -91.90 34.28 12 1 ASP A 185 ? ? -161.09 115.15 13 1 LEU A 186 ? ? -39.84 -35.32 14 1 PRO A 193 ? ? -58.53 -8.41 15 1 SER A 218 ? ? -101.06 47.87 16 1 VAL A 221 ? ? -103.01 -64.28 17 1 PRO A 223 ? ? -31.01 165.80 18 1 ILE A 254 ? ? -98.02 -63.04 # _pdbx_entry_details.entry_id 3LRA _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'THE INTERNAL SEQUENCE LEVLFQGP ARE LINKER.' _pdbx_entry_details.compound_details ;THE L27 DOMAINS OF HUMAN DLG1 (TERMED AS L27HDLG1), HUMAN MPP7 (TERMED AS L27N AND L27C) AND HUMAN MALS3 (TERMED AS L27HMALS3) WERE COVALENTLY LINKED TOGETHER BY PRECISSION PROTEASE CLEAVAGE SITE AS ONE SINGLE POLYPEPTIDE. ; _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 108 ? A GLY 107 2 1 Y 1 A GLU 109 ? A GLU 108 3 1 Y 1 A LYS 110 ? A LYS 109 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _atom_sites.entry_id 3LRA _atom_sites.fract_transf_matrix[1][1] 0.006528 _atom_sites.fract_transf_matrix[1][2] 0.003769 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007538 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016977 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_