HEADER PHOTOSYNTHESIS 12-FEB-10 3LS0 TITLE CRYSTAL STRUCTURE OF CYANOBACTERIAL PSBQ FROM SYNECHOCYSTIS SP. PCC TITLE 2 6803 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SLL1638 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 21-149; COMPND 5 SYNONYM: PSBQ; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNECHOCYSTIS SP.; SOURCE 3 ORGANISM_TAXID: 1148; SOURCE 4 STRAIN: PCC 6803; SOURCE 5 GENE: SLL1638; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX-6-P-3 KEYWDS PHOTOSYNTHESIS, FOUR HELIX BUNDLE EXPDTA X-RAY DIFFRACTION AUTHOR S.A.JACKSON,R.D.FAGERLUND,S.M.WILBANKS,J.J.EATON-RYE REVDAT 4 20-MAR-24 3LS0 1 SEQADV REVDAT 3 01-NOV-17 3LS0 1 REMARK REVDAT 2 07-APR-10 3LS0 1 JRNL REVDAT 1 31-MAR-10 3LS0 0 JRNL AUTH S.A.JACKSON,R.D.FAGERLUND,S.M.WILBANKS,J.J.EATON-RYE JRNL TITL CRYSTAL STRUCTURE OF PSBQ FROM SYNECHOCYSTIS SP. PCC 6803 AT JRNL TITL 2 1.8 A: IMPLICATIONS FOR BINDING AND FUNCTION IN JRNL TITL 3 CYANOBACTERIAL PHOTOSYSTEM II JRNL REF BIOCHEMISTRY V. 49 2765 2010 JRNL REFN ISSN 0006-2960 JRNL PMID 20210304 JRNL DOI 10.1021/BI100217H REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 18.71 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 12092 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 578 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 809 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2260 REMARK 3 BIN FREE R VALUE SET COUNT : 47 REMARK 3 BIN FREE R VALUE : 0.3010 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 905 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 109 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.33000 REMARK 3 B22 (A**2) : -0.50000 REMARK 3 B33 (A**2) : -0.83000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.113 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.113 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.068 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.690 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 920 ; 0.028 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1243 ; 2.193 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 114 ; 4.268 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 45 ;36.101 ;25.111 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 166 ;14.360 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;19.239 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 138 ; 0.155 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 697 ; 0.013 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 572 ; 1.203 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 912 ; 1.931 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 348 ; 3.911 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 331 ; 6.030 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 31 A 36 REMARK 3 ORIGIN FOR THE GROUP (A): 30.2300 -7.5260 -3.4910 REMARK 3 T TENSOR REMARK 3 T11: 0.9039 T22: 0.2564 REMARK 3 T33: 0.7425 T12: 0.1807 REMARK 3 T13: 0.3357 T23: -0.0891 REMARK 3 L TENSOR REMARK 3 L11: 17.7145 L22: 7.7880 REMARK 3 L33: 12.9188 L12: -4.9062 REMARK 3 L13: 2.6528 L23: -9.4722 REMARK 3 S TENSOR REMARK 3 S11: 0.1044 S12: 0.1189 S13: -1.8101 REMARK 3 S21: -0.5273 S22: -0.2628 S23: -0.1686 REMARK 3 S31: 0.7190 S32: 0.6010 S33: 0.1583 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 37 A 58 REMARK 3 ORIGIN FOR THE GROUP (A): 24.4330 8.8120 3.8190 REMARK 3 T TENSOR REMARK 3 T11: 0.0970 T22: 0.0965 REMARK 3 T33: 0.0319 T12: 0.0011 REMARK 3 T13: 0.0238 T23: 0.0178 REMARK 3 L TENSOR REMARK 3 L11: 1.5866 L22: 5.4220 REMARK 3 L33: 7.8922 L12: -1.3333 REMARK 3 L13: -2.2654 L23: 5.2202 REMARK 3 S TENSOR REMARK 3 S11: -0.0029 S12: -0.0158 S13: 0.0808 REMARK 3 S21: -0.0994 S22: 0.1063 S23: -0.2254 REMARK 3 S31: 0.1472 S32: 0.1937 S33: -0.1033 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 59 A 80 REMARK 3 ORIGIN FOR THE GROUP (A): 14.5890 20.4820 15.0820 REMARK 3 T TENSOR REMARK 3 T11: 0.0788 T22: 0.0499 REMARK 3 T33: 0.0030 T12: -0.0016 REMARK 3 T13: -0.0006 T23: 0.0040 REMARK 3 L TENSOR REMARK 3 L11: 2.3135 L22: 4.8569 REMARK 3 L33: 7.2339 L12: 0.3670 REMARK 3 L13: -0.1561 L23: 3.6047 REMARK 3 S TENSOR REMARK 3 S11: 0.0844 S12: 0.0129 S13: -0.0007 REMARK 3 S21: -0.0313 S22: -0.0713 S23: 0.0763 REMARK 3 S31: -0.1745 S32: -0.0237 S33: -0.0132 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 81 A 90 REMARK 3 ORIGIN FOR THE GROUP (A): 15.5120 4.0170 4.4180 REMARK 3 T TENSOR REMARK 3 T11: 0.1553 T22: 0.0860 REMARK 3 T33: 0.0474 T12: 0.0031 REMARK 3 T13: -0.0031 T23: -0.0307 REMARK 3 L TENSOR REMARK 3 L11: 9.9373 L22: 9.8809 REMARK 3 L33: 3.7828 L12: -2.7034 REMARK 3 L13: -0.7850 L23: -0.8980 REMARK 3 S TENSOR REMARK 3 S11: -0.0974 S12: -0.0948 S13: -0.2234 REMARK 3 S21: -0.3348 S22: -0.0833 S23: 0.5631 REMARK 3 S31: 0.2692 S32: -0.3114 S33: 0.1807 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 91 A 98 REMARK 3 ORIGIN FOR THE GROUP (A): 22.3170 -8.4200 4.0140 REMARK 3 T TENSOR REMARK 3 T11: 0.5137 T22: 0.1936 REMARK 3 T33: 0.4940 T12: 0.0837 REMARK 3 T13: -0.0190 T23: -0.0806 REMARK 3 L TENSOR REMARK 3 L11: 2.2999 L22: 14.3377 REMARK 3 L33: 16.1622 L12: -0.8057 REMARK 3 L13: 0.0000 L23: 0.0000 REMARK 3 S TENSOR REMARK 3 S11: 0.0476 S12: 0.0183 S13: -0.4386 REMARK 3 S21: -0.9445 S22: -0.3163 S23: -0.0862 REMARK 3 S31: 1.3994 S32: 0.9265 S33: 0.2686 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 99 A 112 REMARK 3 ORIGIN FOR THE GROUP (A): 16.6540 0.4910 13.9490 REMARK 3 T TENSOR REMARK 3 T11: 0.1345 T22: 0.0782 REMARK 3 T33: 0.0282 T12: -0.0215 REMARK 3 T13: 0.0194 T23: 0.0057 REMARK 3 L TENSOR REMARK 3 L11: 2.7766 L22: 6.9410 REMARK 3 L33: 6.0917 L12: -2.2640 REMARK 3 L13: -2.4816 L23: 2.0756 REMARK 3 S TENSOR REMARK 3 S11: -0.1207 S12: 0.0514 S13: -0.2448 REMARK 3 S21: -0.2544 S22: -0.0837 S23: 0.0323 REMARK 3 S31: 0.4809 S32: -0.0020 S33: 0.2043 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 113 A 140 REMARK 3 ORIGIN FOR THE GROUP (A): 15.5470 12.3090 20.9330 REMARK 3 T TENSOR REMARK 3 T11: 0.0904 T22: 0.0741 REMARK 3 T33: 0.0042 T12: -0.0329 REMARK 3 T13: 0.0014 T23: 0.0091 REMARK 3 L TENSOR REMARK 3 L11: 3.0997 L22: 5.9354 REMARK 3 L33: 3.1137 L12: -3.0391 REMARK 3 L13: -1.2437 L23: 2.1316 REMARK 3 S TENSOR REMARK 3 S11: -0.0549 S12: -0.1388 S13: 0.0382 REMARK 3 S21: 0.1228 S22: 0.0467 S23: 0.0101 REMARK 3 S31: 0.0249 S32: 0.0811 S33: 0.0081 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 141 A 146 REMARK 3 ORIGIN FOR THE GROUP (A): 27.2160 0.3530 8.7110 REMARK 3 T TENSOR REMARK 3 T11: 0.3372 T22: 0.2830 REMARK 3 T33: 0.2048 T12: 0.1733 REMARK 3 T13: -0.0228 T23: -0.0664 REMARK 3 L TENSOR REMARK 3 L11: 18.7657 L22: 7.9660 REMARK 3 L33: 7.4583 L12: -9.9326 REMARK 3 L13: -8.3065 L23: 1.1990 REMARK 3 S TENSOR REMARK 3 S11: -0.1273 S12: -0.0401 S13: -0.5906 REMARK 3 S21: -0.4222 S22: -0.4593 S23: 0.0143 REMARK 3 S31: 0.6116 S32: 0.5856 S33: 0.5866 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 3LS0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-FEB-10. REMARK 100 THE DEPOSITION ID IS D_1000057656. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-AUG-09; 28-AUG-09 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON; REMARK 200 AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2; MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95364; 0.96064,0.97984 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC OMEGA 180; ADSC OMEGA 180 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.9 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12135 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 19.130 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 9.800 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.70 REMARK 200 R MERGE FOR SHELL (I) : 0.39500 REMARK 200 R SYM FOR SHELL (I) : 0.22800 REMARK 200 FOR SHELL : 5.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 1450, 0.1M MES-NAOH, PH 6.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K. 25% PEG 1450, REMARK 280 0.05M MES, 0.05M TRIS-HCL, PH 7.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 14.16600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.75500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 23.39350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 46.75500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 14.16600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 23.39350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 17 REMARK 465 PRO A 18 REMARK 465 LEU A 19 REMARK 465 GLY A 20 REMARK 465 SER A 21 REMARK 465 CYS A 22 REMARK 465 SER A 23 REMARK 465 SER A 24 REMARK 465 PRO A 25 REMARK 465 GLN A 26 REMARK 465 VAL A 27 REMARK 465 GLU A 28 REMARK 465 ILE A 29 REMARK 465 PRO A 30 REMARK 465 THR A 31 REMARK 465 GLN A 147 REMARK 465 ALA A 148 REMARK 465 SER A 149 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 156 O HOH A 238 2.03 REMARK 500 O HOH A 204 O HOH A 217 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS A 100 O HOH A 185 3645 1.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 36 CD GLU A 36 OE1 0.085 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 82 CB - CG - CD2 ANGL. DEV. = 13.9 DEGREES REMARK 500 PRO A 95 C - N - CA ANGL. DEV. = -9.7 DEGREES REMARK 500 ARG A 114 NE - CZ - NH2 ANGL. DEV. = -4.9 DEGREES REMARK 500 LEU A 115 CB - CG - CD1 ANGL. DEV. = 10.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3LS1 RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH ZN2+ DBREF 3LS0 A 21 149 UNP P73048 P73048_SYNY3 21 149 SEQADV 3LS0 GLY A 17 UNP P73048 EXPRESSION TAG SEQADV 3LS0 PRO A 18 UNP P73048 EXPRESSION TAG SEQADV 3LS0 LEU A 19 UNP P73048 EXPRESSION TAG SEQADV 3LS0 GLY A 20 UNP P73048 EXPRESSION TAG SEQRES 1 A 133 GLY PRO LEU GLY SER CYS SER SER PRO GLN VAL GLU ILE SEQRES 2 A 133 PRO THR THR TYR SER PRO GLU LYS ILE ALA GLN LEU GLN SEQRES 3 A 133 VAL TYR VAL ASN PRO ILE ALA VAL ALA ARG ASP GLY MET SEQRES 4 A 133 GLU LYS ARG LEU GLN GLY LEU ILE ALA ASP GLN ASN TRP SEQRES 5 A 133 VAL ASP THR GLN THR TYR ILE HIS GLY PRO LEU GLY GLN SEQRES 6 A 133 LEU ARG ARG ASP MET LEU GLY LEU ALA SER SER LEU LEU SEQRES 7 A 133 PRO LYS ASP GLN ASP LYS ALA LYS THR LEU ALA LYS GLU SEQRES 8 A 133 VAL PHE GLY HIS LEU GLU ARG LEU ASP ALA ALA ALA LYS SEQRES 9 A 133 ASP ARG ASN GLY SER GLN ALA LYS ILE GLN TYR GLN GLU SEQRES 10 A 133 ALA LEU ALA ASP PHE ASP SER PHE LEU ASN LEU LEU PRO SEQRES 11 A 133 GLN ALA SER FORMUL 2 HOH *109(H2 O) HELIX 1 1 SER A 34 ARG A 58 1 25 HELIX 2 2 ARG A 58 ASP A 65 1 8 HELIX 3 3 ASN A 67 GLY A 77 1 11 HELIX 4 4 GLN A 81 LEU A 93 1 13 HELIX 5 5 LEU A 94 ASP A 121 1 28 HELIX 6 6 ASN A 123 LEU A 145 1 23 CRYST1 28.332 46.787 93.510 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.035296 0.000000 0.000000 0.00000 SCALE2 0.000000 0.021373 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010694 0.00000