data_3LSP # _entry.id 3LSP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3LSP pdb_00003lsp 10.2210/pdb3lsp/pdb NDB NA0473 ? ? RCSB RCSB057681 ? ? WWPDB D_1000057681 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-08-04 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2021-10-13 4 'Structure model' 1 3 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' 4 4 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' struct_ref_seq_dif 3 3 'Structure model' struct_site 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3LSP _pdbx_database_status.recvd_initial_deposition_date 2010-02-12 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3LSJ 'Same protein without DNA' unspecified PDB 3LSR . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Miller, D.J.' 1 'White, S.W.' 2 # _citation.id primary _citation.title 'Structural basis for the transcriptional regulation of membrane lipid homeostasis.' _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_volume 17 _citation.page_first 971 _citation.page_last 975 _citation.year 2010 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1545-9993 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20639888 _citation.pdbx_database_id_DOI 10.1038/nsmb.1847 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Miller, D.J.' 1 ? primary 'Zhang, Y.M.' 2 ? primary 'Subramanian, C.' 3 ? primary 'Rock, C.O.' 4 ? primary 'White, S.W.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man DesT 24000.699 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*TP*TP*AP*CP*AP*TP*CP*AP*GP*TP*GP*AP*AP*CP*GP*CP*TP*TP*GP*TP*TP*GP*AP*CP*TP*CP*GP*AP*TP*TP*G)-3') ; 9533.142 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*TP*CP*AP*AP*TP*CP*GP*AP*GP*TP*CP*AP*AP*CP*AP*AP*GP*CP*GP*TP*TP*CP*AP*CP*TP*GP*AP*TP*GP*TP*A)-3') ; 9520.159 1 ? ? ? ? 4 non-polymer syn 'OLEIC ACID' 282.461 1 ? ? ? ? 5 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 6 water nat water 18.015 20 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MASPRAEQKQQTRHALMSAARHLMESGRGFGSLSLREVTRAAGIVPAGFYRHFSDMDQLGLALVAEVDETFRATLRAVRR NEFELGGLIDASVRIFLDAVGANRSQFLFLAREQYGGSLPIRQAIASLRQRITDDLAADLALLNKMPHLDGAALDVFADL VVKTVFATLPELIDPPAADLPPHLMPAAKITHQLRFIMIGGKHWHGLPGSSVDKLAAALE ; ;MASPRAEQKQQTRHALMSAARHLMESGRGFGSLSLREVTRAAGIVPAGFYRHFSDMDQLGLALVAEVDETFRATLRAVRR NEFELGGLIDASVRIFLDAVGANRSQFLFLAREQYGGSLPIRQAIASLRQRITDDLAADLALLNKMPHLDGAALDVFADL VVKTVFATLPELIDPPAADLPPHLMPAAKITHQLRFIMIGGKHWHGLPGSSVDKLAAALE ; A ? 2 polydeoxyribonucleotide no no ;(DT)(DT)(DA)(DC)(DA)(DT)(DC)(DA)(DG)(DT)(DG)(DA)(DA)(DC)(DG)(DC)(DT)(DT)(DG)(DT) (DT)(DG)(DA)(DC)(DT)(DC)(DG)(DA)(DT)(DT)(DG) ; TTACATCAGTGAACGCTTGTTGACTCGATTG B ? 3 polydeoxyribonucleotide no no ;(DT)(DC)(DA)(DA)(DT)(DC)(DG)(DA)(DG)(DT)(DC)(DA)(DA)(DC)(DA)(DA)(DG)(DC)(DG)(DT) (DT)(DC)(DA)(DC)(DT)(DG)(DA)(DT)(DG)(DT)(DA) ; TCAATCGAGTCAACAAGCGTTCACTGATGTA D ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'OLEIC ACID' OLA 5 'SULFATE ION' SO4 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 SER n 1 4 PRO n 1 5 ARG n 1 6 ALA n 1 7 GLU n 1 8 GLN n 1 9 LYS n 1 10 GLN n 1 11 GLN n 1 12 THR n 1 13 ARG n 1 14 HIS n 1 15 ALA n 1 16 LEU n 1 17 MET n 1 18 SER n 1 19 ALA n 1 20 ALA n 1 21 ARG n 1 22 HIS n 1 23 LEU n 1 24 MET n 1 25 GLU n 1 26 SER n 1 27 GLY n 1 28 ARG n 1 29 GLY n 1 30 PHE n 1 31 GLY n 1 32 SER n 1 33 LEU n 1 34 SER n 1 35 LEU n 1 36 ARG n 1 37 GLU n 1 38 VAL n 1 39 THR n 1 40 ARG n 1 41 ALA n 1 42 ALA n 1 43 GLY n 1 44 ILE n 1 45 VAL n 1 46 PRO n 1 47 ALA n 1 48 GLY n 1 49 PHE n 1 50 TYR n 1 51 ARG n 1 52 HIS n 1 53 PHE n 1 54 SER n 1 55 ASP n 1 56 MET n 1 57 ASP n 1 58 GLN n 1 59 LEU n 1 60 GLY n 1 61 LEU n 1 62 ALA n 1 63 LEU n 1 64 VAL n 1 65 ALA n 1 66 GLU n 1 67 VAL n 1 68 ASP n 1 69 GLU n 1 70 THR n 1 71 PHE n 1 72 ARG n 1 73 ALA n 1 74 THR n 1 75 LEU n 1 76 ARG n 1 77 ALA n 1 78 VAL n 1 79 ARG n 1 80 ARG n 1 81 ASN n 1 82 GLU n 1 83 PHE n 1 84 GLU n 1 85 LEU n 1 86 GLY n 1 87 GLY n 1 88 LEU n 1 89 ILE n 1 90 ASP n 1 91 ALA n 1 92 SER n 1 93 VAL n 1 94 ARG n 1 95 ILE n 1 96 PHE n 1 97 LEU n 1 98 ASP n 1 99 ALA n 1 100 VAL n 1 101 GLY n 1 102 ALA n 1 103 ASN n 1 104 ARG n 1 105 SER n 1 106 GLN n 1 107 PHE n 1 108 LEU n 1 109 PHE n 1 110 LEU n 1 111 ALA n 1 112 ARG n 1 113 GLU n 1 114 GLN n 1 115 TYR n 1 116 GLY n 1 117 GLY n 1 118 SER n 1 119 LEU n 1 120 PRO n 1 121 ILE n 1 122 ARG n 1 123 GLN n 1 124 ALA n 1 125 ILE n 1 126 ALA n 1 127 SER n 1 128 LEU n 1 129 ARG n 1 130 GLN n 1 131 ARG n 1 132 ILE n 1 133 THR n 1 134 ASP n 1 135 ASP n 1 136 LEU n 1 137 ALA n 1 138 ALA n 1 139 ASP n 1 140 LEU n 1 141 ALA n 1 142 LEU n 1 143 LEU n 1 144 ASN n 1 145 LYS n 1 146 MET n 1 147 PRO n 1 148 HIS n 1 149 LEU n 1 150 ASP n 1 151 GLY n 1 152 ALA n 1 153 ALA n 1 154 LEU n 1 155 ASP n 1 156 VAL n 1 157 PHE n 1 158 ALA n 1 159 ASP n 1 160 LEU n 1 161 VAL n 1 162 VAL n 1 163 LYS n 1 164 THR n 1 165 VAL n 1 166 PHE n 1 167 ALA n 1 168 THR n 1 169 LEU n 1 170 PRO n 1 171 GLU n 1 172 LEU n 1 173 ILE n 1 174 ASP n 1 175 PRO n 1 176 PRO n 1 177 ALA n 1 178 ALA n 1 179 ASP n 1 180 LEU n 1 181 PRO n 1 182 PRO n 1 183 HIS n 1 184 LEU n 1 185 MET n 1 186 PRO n 1 187 ALA n 1 188 ALA n 1 189 LYS n 1 190 ILE n 1 191 THR n 1 192 HIS n 1 193 GLN n 1 194 LEU n 1 195 ARG n 1 196 PHE n 1 197 ILE n 1 198 MET n 1 199 ILE n 1 200 GLY n 1 201 GLY n 1 202 LYS n 1 203 HIS n 1 204 TRP n 1 205 HIS n 1 206 GLY n 1 207 LEU n 1 208 PRO n 1 209 GLY n 1 210 SER n 1 211 SER n 1 212 VAL n 1 213 ASP n 1 214 LYS n 1 215 LEU n 1 216 ALA n 1 217 ALA n 1 218 ALA n 1 219 LEU n 1 220 GLU n 2 1 DT n 2 2 DT n 2 3 DA n 2 4 DC n 2 5 DA n 2 6 DT n 2 7 DC n 2 8 DA n 2 9 DG n 2 10 DT n 2 11 DG n 2 12 DA n 2 13 DA n 2 14 DC n 2 15 DG n 2 16 DC n 2 17 DT n 2 18 DT n 2 19 DG n 2 20 DT n 2 21 DT n 2 22 DG n 2 23 DA n 2 24 DC n 2 25 DT n 2 26 DC n 2 27 DG n 2 28 DA n 2 29 DT n 2 30 DT n 2 31 DG n 3 1 DT n 3 2 DC n 3 3 DA n 3 4 DA n 3 5 DT n 3 6 DC n 3 7 DG n 3 8 DA n 3 9 DG n 3 10 DT n 3 11 DC n 3 12 DA n 3 13 DA n 3 14 DC n 3 15 DA n 3 16 DA n 3 17 DG n 3 18 DC n 3 19 DG n 3 20 DT n 3 21 DT n 3 22 DC n 3 23 DA n 3 24 DC n 3 25 DT n 3 26 DG n 3 27 DA n 3 28 DT n 3 29 DG n 3 30 DT n 3 31 DA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'desT, PA4890' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pseudomonas aeruginosa' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 287 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21DE3 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 OLA non-polymer . 'OLEIC ACID' ? 'C18 H34 O2' 282.461 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ALA 2 2 ? ? ? A . n A 1 3 SER 3 3 ? ? ? A . n A 1 4 PRO 4 4 4 PRO PRO A . n A 1 5 ARG 5 5 5 ARG ARG A . n A 1 6 ALA 6 6 6 ALA ALA A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 GLN 8 8 8 GLN GLN A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 GLN 10 10 10 GLN GLN A . n A 1 11 GLN 11 11 11 GLN GLN A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 ARG 13 13 13 ARG ARG A . n A 1 14 HIS 14 14 14 HIS HIS A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 MET 17 17 17 MET MET A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 HIS 22 22 22 HIS HIS A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 MET 24 24 24 MET MET A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 PHE 30 30 30 PHE PHE A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 ARG 36 36 36 ARG ARG A . n A 1 37 GLU 37 37 37 GLU GLU A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 THR 39 39 39 THR THR A . n A 1 40 ARG 40 40 40 ARG ARG A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 PRO 46 46 46 PRO PRO A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 PHE 49 49 49 PHE PHE A . n A 1 50 TYR 50 50 50 TYR TYR A . n A 1 51 ARG 51 51 51 ARG ARG A . n A 1 52 HIS 52 52 52 HIS HIS A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 SER 54 54 54 SER SER A . n A 1 55 ASP 55 55 55 ASP ASP A . n A 1 56 MET 56 56 56 MET MET A . n A 1 57 ASP 57 57 57 ASP ASP A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 LEU 59 59 59 LEU LEU A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 ALA 62 62 62 ALA ALA A . n A 1 63 LEU 63 63 63 LEU LEU A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 GLU 66 66 66 GLU GLU A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 ASP 68 68 68 ASP ASP A . n A 1 69 GLU 69 69 69 GLU GLU A . n A 1 70 THR 70 70 70 THR THR A . n A 1 71 PHE 71 71 71 PHE PHE A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 ALA 73 73 73 ALA ALA A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 ARG 76 76 76 ARG ARG A . n A 1 77 ALA 77 77 77 ALA ALA A . n A 1 78 VAL 78 78 78 VAL VAL A . n A 1 79 ARG 79 79 79 ARG ARG A . n A 1 80 ARG 80 80 80 ARG ARG A . n A 1 81 ASN 81 81 81 ASN ASN A . n A 1 82 GLU 82 82 82 GLU GLU A . n A 1 83 PHE 83 83 83 PHE PHE A . n A 1 84 GLU 84 84 84 GLU GLU A . n A 1 85 LEU 85 85 85 LEU LEU A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 GLY 87 87 87 GLY GLY A . n A 1 88 LEU 88 88 88 LEU LEU A . n A 1 89 ILE 89 89 89 ILE ILE A . n A 1 90 ASP 90 90 90 ASP ASP A . n A 1 91 ALA 91 91 91 ALA ALA A . n A 1 92 SER 92 92 92 SER SER A . n A 1 93 VAL 93 93 93 VAL VAL A . n A 1 94 ARG 94 94 94 ARG ARG A . n A 1 95 ILE 95 95 95 ILE ILE A . n A 1 96 PHE 96 96 96 PHE PHE A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 ASP 98 98 98 ASP ASP A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 VAL 100 100 100 VAL VAL A . n A 1 101 GLY 101 101 101 GLY GLY A . n A 1 102 ALA 102 102 102 ALA ALA A . n A 1 103 ASN 103 103 103 ASN ASN A . n A 1 104 ARG 104 104 104 ARG ARG A . n A 1 105 SER 105 105 105 SER SER A . n A 1 106 GLN 106 106 106 GLN GLN A . n A 1 107 PHE 107 107 107 PHE PHE A . n A 1 108 LEU 108 108 108 LEU LEU A . n A 1 109 PHE 109 109 109 PHE PHE A . n A 1 110 LEU 110 110 110 LEU LEU A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 GLU 113 113 113 GLU GLU A . n A 1 114 GLN 114 114 114 GLN GLN A . n A 1 115 TYR 115 115 115 TYR TYR A . n A 1 116 GLY 116 116 116 GLY GLY A . n A 1 117 GLY 117 117 117 GLY GLY A . n A 1 118 SER 118 118 118 SER SER A . n A 1 119 LEU 119 119 119 LEU LEU A . n A 1 120 PRO 120 120 120 PRO PRO A . n A 1 121 ILE 121 121 121 ILE ILE A . n A 1 122 ARG 122 122 122 ARG ARG A . n A 1 123 GLN 123 123 123 GLN GLN A . n A 1 124 ALA 124 124 124 ALA ALA A . n A 1 125 ILE 125 125 125 ILE ILE A . n A 1 126 ALA 126 126 126 ALA ALA A . n A 1 127 SER 127 127 127 SER SER A . n A 1 128 LEU 128 128 128 LEU LEU A . n A 1 129 ARG 129 129 129 ARG ARG A . n A 1 130 GLN 130 130 130 GLN GLN A . n A 1 131 ARG 131 131 131 ARG ARG A . n A 1 132 ILE 132 132 132 ILE ILE A . n A 1 133 THR 133 133 133 THR THR A . n A 1 134 ASP 134 134 134 ASP ASP A . n A 1 135 ASP 135 135 135 ASP ASP A . n A 1 136 LEU 136 136 136 LEU LEU A . n A 1 137 ALA 137 137 137 ALA ALA A . n A 1 138 ALA 138 138 138 ALA ALA A . n A 1 139 ASP 139 139 139 ASP ASP A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 ALA 141 141 141 ALA ALA A . n A 1 142 LEU 142 142 142 LEU LEU A . n A 1 143 LEU 143 143 143 LEU LEU A . n A 1 144 ASN 144 144 144 ASN ASN A . n A 1 145 LYS 145 145 145 LYS LYS A . n A 1 146 MET 146 146 146 MET MET A . n A 1 147 PRO 147 147 147 PRO PRO A . n A 1 148 HIS 148 148 148 HIS HIS A . n A 1 149 LEU 149 149 149 LEU LEU A . n A 1 150 ASP 150 150 150 ASP ASP A . n A 1 151 GLY 151 151 151 GLY GLY A . n A 1 152 ALA 152 152 152 ALA ALA A . n A 1 153 ALA 153 153 153 ALA ALA A . n A 1 154 LEU 154 154 154 LEU LEU A . n A 1 155 ASP 155 155 155 ASP ASP A . n A 1 156 VAL 156 156 156 VAL VAL A . n A 1 157 PHE 157 157 157 PHE PHE A . n A 1 158 ALA 158 158 158 ALA ALA A . n A 1 159 ASP 159 159 159 ASP ASP A . n A 1 160 LEU 160 160 160 LEU LEU A . n A 1 161 VAL 161 161 161 VAL VAL A . n A 1 162 VAL 162 162 162 VAL VAL A . n A 1 163 LYS 163 163 163 LYS LYS A . n A 1 164 THR 164 164 164 THR THR A . n A 1 165 VAL 165 165 165 VAL VAL A . n A 1 166 PHE 166 166 166 PHE PHE A . n A 1 167 ALA 167 167 167 ALA ALA A . n A 1 168 THR 168 168 168 THR THR A . n A 1 169 LEU 169 169 169 LEU LEU A . n A 1 170 PRO 170 170 170 PRO PRO A . n A 1 171 GLU 171 171 171 GLU GLU A . n A 1 172 LEU 172 172 172 LEU LEU A . n A 1 173 ILE 173 173 173 ILE ILE A . n A 1 174 ASP 174 174 174 ASP ASP A . n A 1 175 PRO 175 175 ? ? ? A . n A 1 176 PRO 176 176 ? ? ? A . n A 1 177 ALA 177 177 ? ? ? A . n A 1 178 ALA 178 178 ? ? ? A . n A 1 179 ASP 179 179 ? ? ? A . n A 1 180 LEU 180 180 ? ? ? A . n A 1 181 PRO 181 181 ? ? ? A . n A 1 182 PRO 182 182 ? ? ? A . n A 1 183 HIS 183 183 183 HIS HIS A . n A 1 184 LEU 184 184 184 LEU LEU A . n A 1 185 MET 185 185 185 MET MET A . n A 1 186 PRO 186 186 186 PRO PRO A . n A 1 187 ALA 187 187 187 ALA ALA A . n A 1 188 ALA 188 188 188 ALA ALA A . n A 1 189 LYS 189 189 189 LYS LYS A . n A 1 190 ILE 190 190 190 ILE ILE A . n A 1 191 THR 191 191 191 THR THR A . n A 1 192 HIS 192 192 192 HIS HIS A . n A 1 193 GLN 193 193 193 GLN GLN A . n A 1 194 LEU 194 194 194 LEU LEU A . n A 1 195 ARG 195 195 195 ARG ARG A . n A 1 196 PHE 196 196 196 PHE PHE A . n A 1 197 ILE 197 197 197 ILE ILE A . n A 1 198 MET 198 198 198 MET MET A . n A 1 199 ILE 199 199 199 ILE ILE A . n A 1 200 GLY 200 200 200 GLY GLY A . n A 1 201 GLY 201 201 201 GLY GLY A . n A 1 202 LYS 202 202 202 LYS LYS A . n A 1 203 HIS 203 203 203 HIS HIS A . n A 1 204 TRP 204 204 204 TRP TRP A . n A 1 205 HIS 205 205 205 HIS HIS A . n A 1 206 GLY 206 206 ? ? ? A . n A 1 207 LEU 207 207 ? ? ? A . n A 1 208 PRO 208 208 ? ? ? A . n A 1 209 GLY 209 209 ? ? ? A . n A 1 210 SER 210 210 ? ? ? A . n A 1 211 SER 211 211 ? ? ? A . n A 1 212 VAL 212 212 ? ? ? A . n A 1 213 ASP 213 213 ? ? ? A . n A 1 214 LYS 214 214 ? ? ? A . n A 1 215 LEU 215 215 ? ? ? A . n A 1 216 ALA 216 216 ? ? ? A . n A 1 217 ALA 217 217 ? ? ? A . n A 1 218 ALA 218 218 ? ? ? A . n A 1 219 LEU 219 219 ? ? ? A . n A 1 220 GLU 220 220 ? ? ? A . n B 2 1 DT 1 0 ? ? ? B . n B 2 2 DT 2 1 ? ? ? B . n B 2 3 DA 3 2 ? ? ? B . n B 2 4 DC 4 3 ? ? ? B . n B 2 5 DA 5 4 ? ? ? B . n B 2 6 DT 6 5 5 DT DT B . n B 2 7 DC 7 6 6 DC DC B . n B 2 8 DA 8 7 7 DA DA B . n B 2 9 DG 9 8 8 DG DG B . n B 2 10 DT 10 9 9 DT DT B . n B 2 11 DG 11 10 10 DG DG B . n B 2 12 DA 12 11 11 DA DA B . n B 2 13 DA 13 12 12 DA DA B . n B 2 14 DC 14 13 13 DC DC B . n B 2 15 DG 15 14 14 DG DG B . n B 2 16 DC 16 15 15 DC DC B . n B 2 17 DT 17 16 16 DT DT B . n B 2 18 DT 18 17 17 DT DT B . n B 2 19 DG 19 18 18 DG DG B . n B 2 20 DT 20 19 19 DT DT B . n B 2 21 DT 21 20 20 DT DT B . n B 2 22 DG 22 21 21 DG DG B . n B 2 23 DA 23 22 22 DA DA B . n B 2 24 DC 24 23 23 DC DC B . n B 2 25 DT 25 24 24 DT DT B . n B 2 26 DC 26 25 25 DC DC B . n B 2 27 DG 27 26 26 DG DG B . n B 2 28 DA 28 27 27 DA DA B . n B 2 29 DT 29 28 28 DT DT B . n B 2 30 DT 30 29 ? ? ? B . n B 2 31 DG 31 30 ? ? ? B . n C 3 1 DT 1 0 ? ? ? D . n C 3 2 DC 2 1 ? ? ? D . n C 3 3 DA 3 2 ? ? ? D . n C 3 4 DA 4 3 ? ? ? D . n C 3 5 DT 5 4 ? ? ? D . n C 3 6 DC 6 5 5 DC DC D . n C 3 7 DG 7 6 6 DG DG D . n C 3 8 DA 8 7 7 DA DA D . n C 3 9 DG 9 8 8 DG DG D . n C 3 10 DT 10 9 9 DT DT D . n C 3 11 DC 11 10 10 DC DC D . n C 3 12 DA 12 11 11 DA DA D . n C 3 13 DA 13 12 12 DA DA D . n C 3 14 DC 14 13 13 DC DC D . n C 3 15 DA 15 14 14 DA DA D . n C 3 16 DA 16 15 15 DA DA D . n C 3 17 DG 17 16 16 DG DG D . n C 3 18 DC 18 17 17 DC DC D . n C 3 19 DG 19 18 18 DG DG D . n C 3 20 DT 20 19 19 DT DT D . n C 3 21 DT 21 20 20 DT DT D . n C 3 22 DC 22 21 21 DC DC D . n C 3 23 DA 23 22 22 DA DA D . n C 3 24 DC 24 23 23 DC DC D . n C 3 25 DT 25 24 24 DT DT D . n C 3 26 DG 26 25 25 DG DG D . n C 3 27 DA 27 26 26 DA DA D . n C 3 28 DT 28 27 27 DT DT D . n C 3 29 DG 29 28 28 DG DG D . n C 3 30 DT 30 29 ? ? ? D . n C 3 31 DA 31 30 ? ? ? D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 OLA 1 221 221 OLA OLA A . E 5 SO4 1 222 222 SO4 SO4 A . F 5 SO4 1 223 223 SO4 SO4 A . G 6 HOH 1 224 224 HOH HOH A . G 6 HOH 2 225 225 HOH HOH A . G 6 HOH 3 226 226 HOH HOH A . G 6 HOH 4 227 227 HOH HOH A . G 6 HOH 5 228 228 HOH HOH A . G 6 HOH 6 229 31 HOH HOH A . G 6 HOH 7 230 230 HOH HOH A . G 6 HOH 8 231 231 HOH HOH A . G 6 HOH 9 232 232 HOH HOH A . G 6 HOH 10 233 233 HOH HOH A . G 6 HOH 11 234 234 HOH HOH A . G 6 HOH 12 235 235 HOH HOH A . G 6 HOH 13 236 236 HOH HOH A . G 6 HOH 14 237 237 HOH HOH A . G 6 HOH 15 238 238 HOH HOH A . G 6 HOH 16 239 239 HOH HOH A . G 6 HOH 17 240 240 HOH HOH A . G 6 HOH 18 241 241 HOH HOH A . G 6 HOH 19 242 242 HOH HOH A . H 6 HOH 1 229 229 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 7 ? CG ? A GLU 7 CG 2 1 Y 1 A GLU 7 ? CD ? A GLU 7 CD 3 1 Y 1 A GLU 7 ? OE1 ? A GLU 7 OE1 4 1 Y 1 A GLU 7 ? OE2 ? A GLU 7 OE2 5 1 Y 1 A GLN 11 ? CG ? A GLN 11 CG 6 1 Y 1 A GLN 11 ? CD ? A GLN 11 CD 7 1 Y 1 A GLN 11 ? OE1 ? A GLN 11 OE1 8 1 Y 1 A GLN 11 ? NE2 ? A GLN 11 NE2 9 1 Y 1 A GLU 69 ? CG ? A GLU 69 CG 10 1 Y 1 A GLU 69 ? CD ? A GLU 69 CD 11 1 Y 1 A GLU 69 ? OE1 ? A GLU 69 OE1 12 1 Y 1 A GLU 69 ? OE2 ? A GLU 69 OE2 13 1 Y 1 A LEU 85 ? CG ? A LEU 85 CG 14 1 Y 1 A LEU 85 ? CD1 ? A LEU 85 CD1 15 1 Y 1 A LEU 85 ? CD2 ? A LEU 85 CD2 16 1 Y 1 A ASP 174 ? CG ? A ASP 174 CG 17 1 Y 1 A ASP 174 ? OD1 ? A ASP 174 OD1 18 1 Y 1 A ASP 174 ? OD2 ? A ASP 174 OD2 19 1 Y 1 A HIS 183 ? CG ? A HIS 183 CG 20 1 Y 1 A HIS 183 ? ND1 ? A HIS 183 ND1 21 1 Y 1 A HIS 183 ? CD2 ? A HIS 183 CD2 22 1 Y 1 A HIS 183 ? CE1 ? A HIS 183 CE1 23 1 Y 1 A HIS 183 ? NE2 ? A HIS 183 NE2 24 1 Y 1 A LEU 184 ? CG ? A LEU 184 CG 25 1 Y 1 A LEU 184 ? CD1 ? A LEU 184 CD1 26 1 Y 1 A LEU 184 ? CD2 ? A LEU 184 CD2 27 1 Y 1 A MET 185 ? CG ? A MET 185 CG 28 1 Y 1 A MET 185 ? SD ? A MET 185 SD 29 1 Y 1 A MET 185 ? CE ? A MET 185 CE 30 1 Y 1 A HIS 205 ? CG ? A HIS 205 CG 31 1 Y 1 A HIS 205 ? ND1 ? A HIS 205 ND1 32 1 Y 1 A HIS 205 ? CD2 ? A HIS 205 CD2 33 1 Y 1 A HIS 205 ? CE1 ? A HIS 205 CE1 34 1 Y 1 A HIS 205 ? NE2 ? A HIS 205 NE2 35 1 Y 1 B DT 28 ? "C4'" ? B DT 29 "C4'" 36 1 Y 1 B DT 28 ? "O4'" ? B DT 29 "O4'" 37 1 Y 1 B DT 28 ? "C3'" ? B DT 29 "C3'" 38 1 Y 1 B DT 28 ? "O3'" ? B DT 29 "O3'" 39 1 Y 1 B DT 28 ? "C2'" ? B DT 29 "C2'" 40 1 Y 1 B DT 28 ? "C1'" ? B DT 29 "C1'" 41 1 Y 1 B DT 28 ? N1 ? B DT 29 N1 42 1 Y 1 B DT 28 ? C2 ? B DT 29 C2 43 1 Y 1 B DT 28 ? O2 ? B DT 29 O2 44 1 Y 1 B DT 28 ? N3 ? B DT 29 N3 45 1 Y 1 B DT 28 ? C4 ? B DT 29 C4 46 1 Y 1 B DT 28 ? O4 ? B DT 29 O4 47 1 Y 1 B DT 28 ? C5 ? B DT 29 C5 48 1 Y 1 B DT 28 ? C7 ? B DT 29 C7 49 1 Y 1 B DT 28 ? C6 ? B DT 29 C6 50 1 Y 1 D DG 28 ? "C4'" ? C DG 29 "C4'" 51 1 Y 1 D DG 28 ? "O4'" ? C DG 29 "O4'" 52 1 Y 1 D DG 28 ? "C3'" ? C DG 29 "C3'" 53 1 Y 1 D DG 28 ? "O3'" ? C DG 29 "O3'" 54 1 Y 1 D DG 28 ? "C2'" ? C DG 29 "C2'" 55 1 Y 1 D DG 28 ? "C1'" ? C DG 29 "C1'" 56 1 Y 1 D DG 28 ? N9 ? C DG 29 N9 57 1 Y 1 D DG 28 ? C8 ? C DG 29 C8 58 1 Y 1 D DG 28 ? N7 ? C DG 29 N7 59 1 Y 1 D DG 28 ? C5 ? C DG 29 C5 60 1 Y 1 D DG 28 ? C6 ? C DG 29 C6 61 1 Y 1 D DG 28 ? O6 ? C DG 29 O6 62 1 Y 1 D DG 28 ? N1 ? C DG 29 N1 63 1 Y 1 D DG 28 ? C2 ? C DG 29 C2 64 1 Y 1 D DG 28 ? N2 ? C DG 29 N2 65 1 Y 1 D DG 28 ? N3 ? C DG 29 N3 66 1 Y 1 D DG 28 ? C4 ? C DG 29 C4 67 1 N 1 A OLA 221 ? O1 ? D OLA 1 O1 68 1 N 1 A OLA 221 ? O2 ? D OLA 1 O2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.5.0102 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _cell.entry_id 3LSP _cell.length_a 78.385 _cell.length_b 78.385 _cell.length_c 147.988 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3LSP _symmetry.space_group_name_H-M 'I 41' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 80 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3LSP _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.64 _exptl_crystal.density_percent_sol 53.39 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7 _exptl_crystal_grow.pdbx_details ;ML- 0.1 M Mes pH7.0, 9%PEG 20K. Protein sample- 0.3 mM protein, 0.3 mM oligo, 0.3 mM 18:1delta9-CoA. Drop- 2ul ML + 2ul protein + 0.5 ul 1M ammonium sulfate., VAPOR DIFFUSION, SITTING DROP, temperature 291K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2007-10-08 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-BM' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-BM _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1 # _reflns.entry_id 3LSP _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.0 _reflns.d_resolution_high 2.65 _reflns.number_obs 12753 _reflns.number_all 12894 _reflns.percent_possible_obs 98.9 _reflns.pdbx_Rmerge_I_obs 0.072 _reflns.pdbx_Rsym_value 0.072 _reflns.pdbx_netI_over_sigmaI 28.4 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 3LSP _refine.ls_number_reflns_obs 12098 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 25.73 _refine.ls_d_res_high 2.66 _refine.ls_percent_reflns_obs 98.97 _refine.ls_R_factor_obs 0.22515 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.22337 _refine.ls_R_factor_R_free 0.26136 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 620 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.941 _refine.correlation_coeff_Fo_to_Fc_free 0.911 _refine.B_iso_mean 84.521 _refine.aniso_B[1][1] 0.07 _refine.aniso_B[2][2] 0.07 _refine.aniso_B[3][3] -0.14 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.654 _refine.pdbx_overall_ESU_R_Free 0.322 _refine.overall_SU_ML 0.249 _refine.overall_SU_B 11.799 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1481 _refine_hist.pdbx_number_atoms_nucleic_acid 953 _refine_hist.pdbx_number_atoms_ligand 28 _refine_hist.number_atoms_solvent 20 _refine_hist.number_atoms_total 2482 _refine_hist.d_res_high 2.66 _refine_hist.d_res_low 25.73 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.010 0.021 ? 2607 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.283 2.427 ? 3716 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.040 5.000 ? 192 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.702 21.642 ? 67 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 19.002 15.000 ? 249 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 19.099 15.000 ? 18 'X-RAY DIFFRACTION' ? r_chiral_restr 0.079 0.200 ? 419 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 1631 'X-RAY DIFFRACTION' ? r_mcbond_it 0.825 1.500 ? 960 'X-RAY DIFFRACTION' ? r_mcangle_it 1.575 2.000 ? 1515 'X-RAY DIFFRACTION' ? r_scbond_it 1.369 3.000 ? 1647 'X-RAY DIFFRACTION' ? r_scangle_it 2.177 4.500 ? 2201 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.657 _refine_ls_shell.d_res_low 2.726 _refine_ls_shell.number_reflns_R_work 850 _refine_ls_shell.R_factor_R_work 0.314 _refine_ls_shell.percent_reflns_obs 94.63 _refine_ls_shell.R_factor_R_free 0.367 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 49 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3LSP _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3LSP _struct.title 'Crystal Structure of DesT bound to desCB promoter and oleoyl-CoA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3LSP _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text ;Transcriptional Repressor, DesT-DNA complex, TetR family, DNA-binding, Transcription, Transcription regulation, TRANSCRIPTION-DNA complex ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 6 ? H N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q9HUS3_PSEAE Q9HUS3 1 ;MSSPRAEQKQQTRHALMSAARHLMESGRGFGSLSLREVTRAAGIVPAGFYRHFSDMDQLGLALVAEVDETFRATLRAVRR NEFELGGLIDASVRIFLDAVGANRSQFLFLAREQYGGSLPIRQAIASLRQRITDDLAADLALLNKMPHLDGAALDVFADL VVKTVFATLPELIDPPAADLPPHLMPAAKITHQLRFIMIGGKHWHGLPG ; 1 ? 2 PDB 3LSP 3LSP 2 TTACATCAGTGAACGCTTGTTGACTCGATTG 1 ? 3 PDB 3LSP 3LSP 3 TCAATCGAGTCAACAAGCGTTCACTGATGTA 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3LSP A 1 ? 209 ? Q9HUS3 1 ? 209 ? 1 209 2 2 3LSP B 1 ? 31 ? 3LSP 0 ? 30 ? 0 30 3 3 3LSP D 1 ? 31 ? 3LSP 0 ? 30 ? 0 30 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3LSP ALA A 2 ? UNP Q9HUS3 SER 2 'engineered mutation' 2 1 1 3LSP SER A 210 ? UNP Q9HUS3 ? ? 'expression tag' 210 2 1 3LSP SER A 211 ? UNP Q9HUS3 ? ? 'expression tag' 211 3 1 3LSP VAL A 212 ? UNP Q9HUS3 ? ? 'expression tag' 212 4 1 3LSP ASP A 213 ? UNP Q9HUS3 ? ? 'expression tag' 213 5 1 3LSP LYS A 214 ? UNP Q9HUS3 ? ? 'expression tag' 214 6 1 3LSP LEU A 215 ? UNP Q9HUS3 ? ? 'expression tag' 215 7 1 3LSP ALA A 216 ? UNP Q9HUS3 ? ? 'expression tag' 216 8 1 3LSP ALA A 217 ? UNP Q9HUS3 ? ? 'expression tag' 217 9 1 3LSP ALA A 218 ? UNP Q9HUS3 ? ? 'expression tag' 218 10 1 3LSP LEU A 219 ? UNP Q9HUS3 ? ? 'expression tag' 219 11 1 3LSP GLU A 220 ? UNP Q9HUS3 ? ? 'expression tag' 220 12 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? tetrameric 4 2 author_defined_assembly ? tetrameric 4 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2 A,B,D,E,F,G,H 2 1,2 A,C,D,E,F,G # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 6_545 -x,-y-1,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 -78.3850000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 6 ? MET A 24 ? ALA A 6 MET A 24 1 ? 19 HELX_P HELX_P2 2 GLU A 25 ? GLY A 27 ? GLU A 25 GLY A 27 5 ? 3 HELX_P HELX_P3 3 GLY A 29 ? LEU A 33 ? GLY A 29 LEU A 33 5 ? 5 HELX_P HELX_P4 4 SER A 34 ? GLY A 43 ? SER A 34 GLY A 43 1 ? 10 HELX_P HELX_P5 5 VAL A 45 ? HIS A 52 ? VAL A 45 HIS A 52 5 ? 8 HELX_P HELX_P6 6 ASP A 55 ? GLU A 82 ? ASP A 55 GLU A 82 1 ? 28 HELX_P HELX_P7 7 GLY A 87 ? ASN A 103 ? GLY A 87 ASN A 103 1 ? 17 HELX_P HELX_P8 8 ASN A 103 ? GLN A 114 ? ASN A 103 GLN A 114 1 ? 12 HELX_P HELX_P9 9 SER A 118 ? ASN A 144 ? SER A 118 ASN A 144 1 ? 27 HELX_P HELX_P10 10 ASP A 150 ? LEU A 169 ? ASP A 150 LEU A 169 1 ? 20 HELX_P HELX_P11 11 PRO A 170 ? ILE A 173 ? PRO A 170 ILE A 173 5 ? 4 HELX_P HELX_P12 12 MET A 185 ? HIS A 203 ? MET A 185 HIS A 203 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? C DG 7 N1 B ? ? 1_555 C DG 26 O6 B ? D DG 6 D DG 25 6_545 ? ? ? ? ? ? TYPE_3_PAIR ? ? ? hydrog2 hydrog ? ? C DG 7 O6 B ? ? 1_555 C DG 26 N1 B ? D DG 6 D DG 25 6_545 ? ? ? ? ? ? TYPE_3_PAIR ? ? ? hydrog3 hydrog ? ? C DG 9 N1 B ? ? 1_555 C DC 24 N3 B ? D DG 8 D DC 23 6_545 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog4 hydrog ? ? C DT 10 N3 B ? ? 1_555 C DA 23 N1 B ? D DT 9 D DA 22 6_545 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DT 10 O4 B ? ? 1_555 C DA 23 N6 B ? D DT 9 D DA 22 6_545 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DA 12 N1 B ? ? 1_555 C DT 21 N3 B ? D DA 11 D DT 20 6_545 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DA 12 N6 B ? ? 1_555 C DT 21 O4 B ? D DA 11 D DT 20 6_545 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DA 13 N1 B ? ? 1_555 C DT 20 N3 B ? D DA 12 D DT 19 6_545 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DA 13 N6 B ? ? 1_555 C DT 20 O4 B ? D DA 12 D DT 19 6_545 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DA 13 N1 B ? ? 1_555 C DT 21 N3 B ? D DA 12 D DT 20 6_545 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog11 hydrog ? ? C DC 14 O2 B ? ? 1_555 C DG 19 N2 B ? D DC 13 D DG 18 6_545 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog12 hydrog ? ? C DA 16 N6 B ? ? 1_555 C DG 17 O6 B ? D DA 15 D DG 16 6_545 ? ? ? ? ? ? 'DA-DG MISPAIR' ? ? ? hydrog13 hydrog ? ? C DG 17 N1 B ? ? 1_555 C DA 16 N3 B ? D DG 16 D DA 15 6_545 ? ? ? ? ? ? 'DG-DA MISPAIR' ? ? ? hydrog14 hydrog ? ? C DG 19 N1 B ? ? 1_555 C DC 14 N3 B ? D DG 18 D DC 13 6_545 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog15 hydrog ? ? C DT 20 N3 B ? ? 1_555 C DA 13 N1 B ? D DT 19 D DA 12 6_545 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DT 20 O4 B ? ? 1_555 C DA 13 N6 B ? D DT 19 D DA 12 6_545 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DT 21 N3 B ? ? 1_555 C DA 12 N1 B ? D DT 20 D DA 11 6_545 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DT 21 O4 B ? ? 1_555 C DA 12 N6 B ? D DT 20 D DA 11 6_545 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DT 21 N3 B ? ? 1_555 C DA 13 N1 B ? D DT 20 D DA 12 6_545 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog20 hydrog ? ? C DA 23 N1 B ? ? 1_555 C DT 10 N3 B ? D DA 22 D DT 9 6_545 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DA 23 N6 B ? ? 1_555 C DT 10 O4 B ? D DA 22 D DT 9 6_545 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DC 24 O2 B ? ? 1_555 C DG 9 N2 B ? D DC 23 D DG 8 6_545 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog23 hydrog ? ? C DG 26 N1 B ? ? 1_555 C DG 7 O6 B ? D DG 25 D DG 6 6_545 ? ? ? ? ? ? TYPE_3_PAIR ? ? ? hydrog24 hydrog ? ? C DG 26 O6 B ? ? 1_555 C DG 7 N1 B ? D DG 25 D DG 6 6_545 ? ? ? ? ? ? TYPE_3_PAIR ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A OLA 221 ? 4 'BINDING SITE FOR RESIDUE OLA A 221' AC2 Software A SO4 222 ? 6 'BINDING SITE FOR RESIDUE SO4 A 222' AC3 Software A SO4 223 ? 2 'BINDING SITE FOR RESIDUE SO4 A 223' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 LEU A 75 ? LEU A 75 . ? 1_555 ? 2 AC1 4 GLU A 82 ? GLU A 82 . ? 1_555 ? 3 AC1 4 SER A 92 ? SER A 92 . ? 1_555 ? 4 AC1 4 MET A 198 ? MET A 198 . ? 1_555 ? 5 AC2 6 HIS A 14 ? HIS A 14 . ? 1_555 ? 6 AC2 6 SER A 18 ? SER A 18 . ? 1_555 ? 7 AC2 6 ARG A 21 ? ARG A 21 . ? 1_555 ? 8 AC2 6 HIS A 22 ? HIS A 22 . ? 1_555 ? 9 AC2 6 HOH G . ? HOH A 236 . ? 1_555 ? 10 AC2 6 HOH G . ? HOH A 242 . ? 1_555 ? 11 AC3 2 ILE A 89 ? ILE A 89 . ? 1_555 ? 12 AC3 2 ARG A 195 ? ARG A 195 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" B DC 6 ? A "C2'" B DC 6 ? A "C1'" B DC 6 ? A 97.13 102.40 -5.27 0.80 N 2 1 "O4'" B DC 6 ? A "C1'" B DC 6 ? A N1 B DC 6 ? A 111.79 108.30 3.49 0.30 N 3 1 "O4'" B DG 8 ? A "C1'" B DG 8 ? A N9 B DG 8 ? A 111.25 108.30 2.95 0.30 N 4 1 "O4'" B DA 11 ? A "C1'" B DA 11 ? A N9 B DA 11 ? A 110.60 108.30 2.30 0.30 N 5 1 "O4'" B DA 12 ? A "C1'" B DA 12 ? A N9 B DA 12 ? A 110.49 108.30 2.19 0.30 N 6 1 "O4'" B DC 13 ? A "C1'" B DC 13 ? A N1 B DC 13 ? A 110.33 108.30 2.03 0.30 N 7 1 "O4'" B DG 14 ? A "C1'" B DG 14 ? A N9 B DG 14 ? A 111.54 108.30 3.24 0.30 N 8 1 "O4'" B DC 15 ? A "C1'" B DC 15 ? A N1 B DC 15 ? A 111.21 108.30 2.91 0.30 N 9 1 "O4'" B DC 23 ? A "C4'" B DC 23 ? A "C3'" B DC 23 ? A 101.39 104.50 -3.11 0.40 N 10 1 "O4'" B DC 23 ? A "C1'" B DC 23 ? A N1 B DC 23 ? A 110.83 108.30 2.53 0.30 N 11 1 "C3'" D DG 6 ? B "C2'" D DG 6 ? B "C1'" D DG 6 ? B 96.59 102.40 -5.81 0.80 N 12 1 "O4'" D DG 6 ? B "C1'" D DG 6 ? B N9 D DG 6 ? B 111.01 108.30 2.71 0.30 N 13 1 "O4'" D DG 8 ? B "C1'" D DG 8 ? B N9 D DG 8 ? B 111.23 108.30 2.93 0.30 N 14 1 "O4'" D DA 11 ? B "C1'" D DA 11 ? B N9 D DA 11 ? B 110.64 108.30 2.34 0.30 N 15 1 "O4'" D DA 12 ? B "C1'" D DA 12 ? B N9 D DA 12 ? B 110.45 108.30 2.15 0.30 N 16 1 "O4'" D DC 13 ? B "C1'" D DC 13 ? B N1 D DC 13 ? B 110.34 108.30 2.04 0.30 N 17 1 "O4'" D DA 14 ? B "C1'" D DA 14 ? B N9 D DA 14 ? B 111.13 108.30 2.83 0.30 N 18 1 "O4'" D DA 15 ? B "C1'" D DA 15 ? B N9 D DA 15 ? B 111.14 108.30 2.84 0.30 N 19 1 "O4'" D DC 23 ? B "C4'" D DC 23 ? B "C3'" D DC 23 ? B 101.63 104.50 -2.87 0.40 N 20 1 "O4'" D DC 23 ? B "C1'" D DC 23 ? B N1 D DC 23 ? B 110.86 108.30 2.56 0.30 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id HIS _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 52 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -132.48 _pdbx_validate_torsion.psi -43.23 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ALA 2 ? A ALA 2 3 1 Y 1 A SER 3 ? A SER 3 4 1 Y 1 A PRO 175 ? A PRO 175 5 1 Y 1 A PRO 176 ? A PRO 176 6 1 Y 1 A ALA 177 ? A ALA 177 7 1 Y 1 A ALA 178 ? A ALA 178 8 1 Y 1 A ASP 179 ? A ASP 179 9 1 Y 1 A LEU 180 ? A LEU 180 10 1 Y 1 A PRO 181 ? A PRO 181 11 1 Y 1 A PRO 182 ? A PRO 182 12 1 Y 1 A GLY 206 ? A GLY 206 13 1 Y 1 A LEU 207 ? A LEU 207 14 1 Y 1 A PRO 208 ? A PRO 208 15 1 Y 1 A GLY 209 ? A GLY 209 16 1 Y 1 A SER 210 ? A SER 210 17 1 Y 1 A SER 211 ? A SER 211 18 1 Y 1 A VAL 212 ? A VAL 212 19 1 Y 1 A ASP 213 ? A ASP 213 20 1 Y 1 A LYS 214 ? A LYS 214 21 1 Y 1 A LEU 215 ? A LEU 215 22 1 Y 1 A ALA 216 ? A ALA 216 23 1 Y 1 A ALA 217 ? A ALA 217 24 1 Y 1 A ALA 218 ? A ALA 218 25 1 Y 1 A LEU 219 ? A LEU 219 26 1 Y 1 A GLU 220 ? A GLU 220 27 1 Y 1 B DT 0 ? B DT 1 28 1 Y 1 B DT 1 ? B DT 2 29 1 Y 1 B DA 2 ? B DA 3 30 1 Y 1 B DC 3 ? B DC 4 31 1 Y 1 B DA 4 ? B DA 5 32 1 Y 1 B DT 29 ? B DT 30 33 1 Y 1 B DG 30 ? B DG 31 34 1 Y 1 D DT 0 ? C DT 1 35 1 Y 1 D DC 1 ? C DC 2 36 1 Y 1 D DA 2 ? C DA 3 37 1 Y 1 D DA 3 ? C DA 4 38 1 Y 1 D DT 4 ? C DT 5 39 1 Y 1 D DT 29 ? C DT 30 40 1 Y 1 D DA 30 ? C DA 31 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DA OP3 O N N 74 DA P P N N 75 DA OP1 O N N 76 DA OP2 O N N 77 DA "O5'" O N N 78 DA "C5'" C N N 79 DA "C4'" C N R 80 DA "O4'" O N N 81 DA "C3'" C N S 82 DA "O3'" O N N 83 DA "C2'" C N N 84 DA "C1'" C N R 85 DA N9 N Y N 86 DA C8 C Y N 87 DA N7 N Y N 88 DA C5 C Y N 89 DA C6 C Y N 90 DA N6 N N N 91 DA N1 N Y N 92 DA C2 C Y N 93 DA N3 N Y N 94 DA C4 C Y N 95 DA HOP3 H N N 96 DA HOP2 H N N 97 DA "H5'" H N N 98 DA "H5''" H N N 99 DA "H4'" H N N 100 DA "H3'" H N N 101 DA "HO3'" H N N 102 DA "H2'" H N N 103 DA "H2''" H N N 104 DA "H1'" H N N 105 DA H8 H N N 106 DA H61 H N N 107 DA H62 H N N 108 DA H2 H N N 109 DC OP3 O N N 110 DC P P N N 111 DC OP1 O N N 112 DC OP2 O N N 113 DC "O5'" O N N 114 DC "C5'" C N N 115 DC "C4'" C N R 116 DC "O4'" O N N 117 DC "C3'" C N S 118 DC "O3'" O N N 119 DC "C2'" C N N 120 DC "C1'" C N R 121 DC N1 N N N 122 DC C2 C N N 123 DC O2 O N N 124 DC N3 N N N 125 DC C4 C N N 126 DC N4 N N N 127 DC C5 C N N 128 DC C6 C N N 129 DC HOP3 H N N 130 DC HOP2 H N N 131 DC "H5'" H N N 132 DC "H5''" H N N 133 DC "H4'" H N N 134 DC "H3'" H N N 135 DC "HO3'" H N N 136 DC "H2'" H N N 137 DC "H2''" H N N 138 DC "H1'" H N N 139 DC H41 H N N 140 DC H42 H N N 141 DC H5 H N N 142 DC H6 H N N 143 DG OP3 O N N 144 DG P P N N 145 DG OP1 O N N 146 DG OP2 O N N 147 DG "O5'" O N N 148 DG "C5'" C N N 149 DG "C4'" C N R 150 DG "O4'" O N N 151 DG "C3'" C N S 152 DG "O3'" O N N 153 DG "C2'" C N N 154 DG "C1'" C N R 155 DG N9 N Y N 156 DG C8 C Y N 157 DG N7 N Y N 158 DG C5 C Y N 159 DG C6 C N N 160 DG O6 O N N 161 DG N1 N N N 162 DG C2 C N N 163 DG N2 N N N 164 DG N3 N N N 165 DG C4 C Y N 166 DG HOP3 H N N 167 DG HOP2 H N N 168 DG "H5'" H N N 169 DG "H5''" H N N 170 DG "H4'" H N N 171 DG "H3'" H N N 172 DG "HO3'" H N N 173 DG "H2'" H N N 174 DG "H2''" H N N 175 DG "H1'" H N N 176 DG H8 H N N 177 DG H1 H N N 178 DG H21 H N N 179 DG H22 H N N 180 DT OP3 O N N 181 DT P P N N 182 DT OP1 O N N 183 DT OP2 O N N 184 DT "O5'" O N N 185 DT "C5'" C N N 186 DT "C4'" C N R 187 DT "O4'" O N N 188 DT "C3'" C N S 189 DT "O3'" O N N 190 DT "C2'" C N N 191 DT "C1'" C N R 192 DT N1 N N N 193 DT C2 C N N 194 DT O2 O N N 195 DT N3 N N N 196 DT C4 C N N 197 DT O4 O N N 198 DT C5 C N N 199 DT C7 C N N 200 DT C6 C N N 201 DT HOP3 H N N 202 DT HOP2 H N N 203 DT "H5'" H N N 204 DT "H5''" H N N 205 DT "H4'" H N N 206 DT "H3'" H N N 207 DT "HO3'" H N N 208 DT "H2'" H N N 209 DT "H2''" H N N 210 DT "H1'" H N N 211 DT H3 H N N 212 DT H71 H N N 213 DT H72 H N N 214 DT H73 H N N 215 DT H6 H N N 216 GLN N N N N 217 GLN CA C N S 218 GLN C C N N 219 GLN O O N N 220 GLN CB C N N 221 GLN CG C N N 222 GLN CD C N N 223 GLN OE1 O N N 224 GLN NE2 N N N 225 GLN OXT O N N 226 GLN H H N N 227 GLN H2 H N N 228 GLN HA H N N 229 GLN HB2 H N N 230 GLN HB3 H N N 231 GLN HG2 H N N 232 GLN HG3 H N N 233 GLN HE21 H N N 234 GLN HE22 H N N 235 GLN HXT H N N 236 GLU N N N N 237 GLU CA C N S 238 GLU C C N N 239 GLU O O N N 240 GLU CB C N N 241 GLU CG C N N 242 GLU CD C N N 243 GLU OE1 O N N 244 GLU OE2 O N N 245 GLU OXT O N N 246 GLU H H N N 247 GLU H2 H N N 248 GLU HA H N N 249 GLU HB2 H N N 250 GLU HB3 H N N 251 GLU HG2 H N N 252 GLU HG3 H N N 253 GLU HE2 H N N 254 GLU HXT H N N 255 GLY N N N N 256 GLY CA C N N 257 GLY C C N N 258 GLY O O N N 259 GLY OXT O N N 260 GLY H H N N 261 GLY H2 H N N 262 GLY HA2 H N N 263 GLY HA3 H N N 264 GLY HXT H N N 265 HIS N N N N 266 HIS CA C N S 267 HIS C C N N 268 HIS O O N N 269 HIS CB C N N 270 HIS CG C Y N 271 HIS ND1 N Y N 272 HIS CD2 C Y N 273 HIS CE1 C Y N 274 HIS NE2 N Y N 275 HIS OXT O N N 276 HIS H H N N 277 HIS H2 H N N 278 HIS HA H N N 279 HIS HB2 H N N 280 HIS HB3 H N N 281 HIS HD1 H N N 282 HIS HD2 H N N 283 HIS HE1 H N N 284 HIS HE2 H N N 285 HIS HXT H N N 286 HOH O O N N 287 HOH H1 H N N 288 HOH H2 H N N 289 ILE N N N N 290 ILE CA C N S 291 ILE C C N N 292 ILE O O N N 293 ILE CB C N S 294 ILE CG1 C N N 295 ILE CG2 C N N 296 ILE CD1 C N N 297 ILE OXT O N N 298 ILE H H N N 299 ILE H2 H N N 300 ILE HA H N N 301 ILE HB H N N 302 ILE HG12 H N N 303 ILE HG13 H N N 304 ILE HG21 H N N 305 ILE HG22 H N N 306 ILE HG23 H N N 307 ILE HD11 H N N 308 ILE HD12 H N N 309 ILE HD13 H N N 310 ILE HXT H N N 311 LEU N N N N 312 LEU CA C N S 313 LEU C C N N 314 LEU O O N N 315 LEU CB C N N 316 LEU CG C N N 317 LEU CD1 C N N 318 LEU CD2 C N N 319 LEU OXT O N N 320 LEU H H N N 321 LEU H2 H N N 322 LEU HA H N N 323 LEU HB2 H N N 324 LEU HB3 H N N 325 LEU HG H N N 326 LEU HD11 H N N 327 LEU HD12 H N N 328 LEU HD13 H N N 329 LEU HD21 H N N 330 LEU HD22 H N N 331 LEU HD23 H N N 332 LEU HXT H N N 333 LYS N N N N 334 LYS CA C N S 335 LYS C C N N 336 LYS O O N N 337 LYS CB C N N 338 LYS CG C N N 339 LYS CD C N N 340 LYS CE C N N 341 LYS NZ N N N 342 LYS OXT O N N 343 LYS H H N N 344 LYS H2 H N N 345 LYS HA H N N 346 LYS HB2 H N N 347 LYS HB3 H N N 348 LYS HG2 H N N 349 LYS HG3 H N N 350 LYS HD2 H N N 351 LYS HD3 H N N 352 LYS HE2 H N N 353 LYS HE3 H N N 354 LYS HZ1 H N N 355 LYS HZ2 H N N 356 LYS HZ3 H N N 357 LYS HXT H N N 358 MET N N N N 359 MET CA C N S 360 MET C C N N 361 MET O O N N 362 MET CB C N N 363 MET CG C N N 364 MET SD S N N 365 MET CE C N N 366 MET OXT O N N 367 MET H H N N 368 MET H2 H N N 369 MET HA H N N 370 MET HB2 H N N 371 MET HB3 H N N 372 MET HG2 H N N 373 MET HG3 H N N 374 MET HE1 H N N 375 MET HE2 H N N 376 MET HE3 H N N 377 MET HXT H N N 378 OLA C1 C N N 379 OLA O1 O N N 380 OLA O2 O N N 381 OLA C2 C N N 382 OLA C3 C N N 383 OLA C4 C N N 384 OLA C5 C N N 385 OLA C6 C N N 386 OLA C7 C N N 387 OLA C8 C N N 388 OLA C9 C N N 389 OLA C10 C N N 390 OLA C11 C N N 391 OLA C12 C N N 392 OLA C13 C N N 393 OLA C14 C N N 394 OLA C15 C N N 395 OLA C16 C N N 396 OLA C17 C N N 397 OLA C18 C N N 398 OLA HO2 H N N 399 OLA H21 H N N 400 OLA H22 H N N 401 OLA H31 H N N 402 OLA H32 H N N 403 OLA H41 H N N 404 OLA H42 H N N 405 OLA H51 H N N 406 OLA H52 H N N 407 OLA H61 H N N 408 OLA H62 H N N 409 OLA H71 H N N 410 OLA H72 H N N 411 OLA H81 H N N 412 OLA H82 H N N 413 OLA H9 H N N 414 OLA H10 H N N 415 OLA H111 H N N 416 OLA H112 H N N 417 OLA H121 H N N 418 OLA H122 H N N 419 OLA H131 H N N 420 OLA H132 H N N 421 OLA H141 H N N 422 OLA H142 H N N 423 OLA H151 H N N 424 OLA H152 H N N 425 OLA H161 H N N 426 OLA H162 H N N 427 OLA H171 H N N 428 OLA H172 H N N 429 OLA H181 H N N 430 OLA H182 H N N 431 OLA H183 H N N 432 PHE N N N N 433 PHE CA C N S 434 PHE C C N N 435 PHE O O N N 436 PHE CB C N N 437 PHE CG C Y N 438 PHE CD1 C Y N 439 PHE CD2 C Y N 440 PHE CE1 C Y N 441 PHE CE2 C Y N 442 PHE CZ C Y N 443 PHE OXT O N N 444 PHE H H N N 445 PHE H2 H N N 446 PHE HA H N N 447 PHE HB2 H N N 448 PHE HB3 H N N 449 PHE HD1 H N N 450 PHE HD2 H N N 451 PHE HE1 H N N 452 PHE HE2 H N N 453 PHE HZ H N N 454 PHE HXT H N N 455 PRO N N N N 456 PRO CA C N S 457 PRO C C N N 458 PRO O O N N 459 PRO CB C N N 460 PRO CG C N N 461 PRO CD C N N 462 PRO OXT O N N 463 PRO H H N N 464 PRO HA H N N 465 PRO HB2 H N N 466 PRO HB3 H N N 467 PRO HG2 H N N 468 PRO HG3 H N N 469 PRO HD2 H N N 470 PRO HD3 H N N 471 PRO HXT H N N 472 SER N N N N 473 SER CA C N S 474 SER C C N N 475 SER O O N N 476 SER CB C N N 477 SER OG O N N 478 SER OXT O N N 479 SER H H N N 480 SER H2 H N N 481 SER HA H N N 482 SER HB2 H N N 483 SER HB3 H N N 484 SER HG H N N 485 SER HXT H N N 486 SO4 S S N N 487 SO4 O1 O N N 488 SO4 O2 O N N 489 SO4 O3 O N N 490 SO4 O4 O N N 491 THR N N N N 492 THR CA C N S 493 THR C C N N 494 THR O O N N 495 THR CB C N R 496 THR OG1 O N N 497 THR CG2 C N N 498 THR OXT O N N 499 THR H H N N 500 THR H2 H N N 501 THR HA H N N 502 THR HB H N N 503 THR HG1 H N N 504 THR HG21 H N N 505 THR HG22 H N N 506 THR HG23 H N N 507 THR HXT H N N 508 TRP N N N N 509 TRP CA C N S 510 TRP C C N N 511 TRP O O N N 512 TRP CB C N N 513 TRP CG C Y N 514 TRP CD1 C Y N 515 TRP CD2 C Y N 516 TRP NE1 N Y N 517 TRP CE2 C Y N 518 TRP CE3 C Y N 519 TRP CZ2 C Y N 520 TRP CZ3 C Y N 521 TRP CH2 C Y N 522 TRP OXT O N N 523 TRP H H N N 524 TRP H2 H N N 525 TRP HA H N N 526 TRP HB2 H N N 527 TRP HB3 H N N 528 TRP HD1 H N N 529 TRP HE1 H N N 530 TRP HE3 H N N 531 TRP HZ2 H N N 532 TRP HZ3 H N N 533 TRP HH2 H N N 534 TRP HXT H N N 535 TYR N N N N 536 TYR CA C N S 537 TYR C C N N 538 TYR O O N N 539 TYR CB C N N 540 TYR CG C Y N 541 TYR CD1 C Y N 542 TYR CD2 C Y N 543 TYR CE1 C Y N 544 TYR CE2 C Y N 545 TYR CZ C Y N 546 TYR OH O N N 547 TYR OXT O N N 548 TYR H H N N 549 TYR H2 H N N 550 TYR HA H N N 551 TYR HB2 H N N 552 TYR HB3 H N N 553 TYR HD1 H N N 554 TYR HD2 H N N 555 TYR HE1 H N N 556 TYR HE2 H N N 557 TYR HH H N N 558 TYR HXT H N N 559 VAL N N N N 560 VAL CA C N S 561 VAL C C N N 562 VAL O O N N 563 VAL CB C N N 564 VAL CG1 C N N 565 VAL CG2 C N N 566 VAL OXT O N N 567 VAL H H N N 568 VAL H2 H N N 569 VAL HA H N N 570 VAL HB H N N 571 VAL HG11 H N N 572 VAL HG12 H N N 573 VAL HG13 H N N 574 VAL HG21 H N N 575 VAL HG22 H N N 576 VAL HG23 H N N 577 VAL HXT H N N 578 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DG OP3 P sing N N 143 DG OP3 HOP3 sing N N 144 DG P OP1 doub N N 145 DG P OP2 sing N N 146 DG P "O5'" sing N N 147 DG OP2 HOP2 sing N N 148 DG "O5'" "C5'" sing N N 149 DG "C5'" "C4'" sing N N 150 DG "C5'" "H5'" sing N N 151 DG "C5'" "H5''" sing N N 152 DG "C4'" "O4'" sing N N 153 DG "C4'" "C3'" sing N N 154 DG "C4'" "H4'" sing N N 155 DG "O4'" "C1'" sing N N 156 DG "C3'" "O3'" sing N N 157 DG "C3'" "C2'" sing N N 158 DG "C3'" "H3'" sing N N 159 DG "O3'" "HO3'" sing N N 160 DG "C2'" "C1'" sing N N 161 DG "C2'" "H2'" sing N N 162 DG "C2'" "H2''" sing N N 163 DG "C1'" N9 sing N N 164 DG "C1'" "H1'" sing N N 165 DG N9 C8 sing Y N 166 DG N9 C4 sing Y N 167 DG C8 N7 doub Y N 168 DG C8 H8 sing N N 169 DG N7 C5 sing Y N 170 DG C5 C6 sing N N 171 DG C5 C4 doub Y N 172 DG C6 O6 doub N N 173 DG C6 N1 sing N N 174 DG N1 C2 sing N N 175 DG N1 H1 sing N N 176 DG C2 N2 sing N N 177 DG C2 N3 doub N N 178 DG N2 H21 sing N N 179 DG N2 H22 sing N N 180 DG N3 C4 sing N N 181 DT OP3 P sing N N 182 DT OP3 HOP3 sing N N 183 DT P OP1 doub N N 184 DT P OP2 sing N N 185 DT P "O5'" sing N N 186 DT OP2 HOP2 sing N N 187 DT "O5'" "C5'" sing N N 188 DT "C5'" "C4'" sing N N 189 DT "C5'" "H5'" sing N N 190 DT "C5'" "H5''" sing N N 191 DT "C4'" "O4'" sing N N 192 DT "C4'" "C3'" sing N N 193 DT "C4'" "H4'" sing N N 194 DT "O4'" "C1'" sing N N 195 DT "C3'" "O3'" sing N N 196 DT "C3'" "C2'" sing N N 197 DT "C3'" "H3'" sing N N 198 DT "O3'" "HO3'" sing N N 199 DT "C2'" "C1'" sing N N 200 DT "C2'" "H2'" sing N N 201 DT "C2'" "H2''" sing N N 202 DT "C1'" N1 sing N N 203 DT "C1'" "H1'" sing N N 204 DT N1 C2 sing N N 205 DT N1 C6 sing N N 206 DT C2 O2 doub N N 207 DT C2 N3 sing N N 208 DT N3 C4 sing N N 209 DT N3 H3 sing N N 210 DT C4 O4 doub N N 211 DT C4 C5 sing N N 212 DT C5 C7 sing N N 213 DT C5 C6 doub N N 214 DT C7 H71 sing N N 215 DT C7 H72 sing N N 216 DT C7 H73 sing N N 217 DT C6 H6 sing N N 218 GLN N CA sing N N 219 GLN N H sing N N 220 GLN N H2 sing N N 221 GLN CA C sing N N 222 GLN CA CB sing N N 223 GLN CA HA sing N N 224 GLN C O doub N N 225 GLN C OXT sing N N 226 GLN CB CG sing N N 227 GLN CB HB2 sing N N 228 GLN CB HB3 sing N N 229 GLN CG CD sing N N 230 GLN CG HG2 sing N N 231 GLN CG HG3 sing N N 232 GLN CD OE1 doub N N 233 GLN CD NE2 sing N N 234 GLN NE2 HE21 sing N N 235 GLN NE2 HE22 sing N N 236 GLN OXT HXT sing N N 237 GLU N CA sing N N 238 GLU N H sing N N 239 GLU N H2 sing N N 240 GLU CA C sing N N 241 GLU CA CB sing N N 242 GLU CA HA sing N N 243 GLU C O doub N N 244 GLU C OXT sing N N 245 GLU CB CG sing N N 246 GLU CB HB2 sing N N 247 GLU CB HB3 sing N N 248 GLU CG CD sing N N 249 GLU CG HG2 sing N N 250 GLU CG HG3 sing N N 251 GLU CD OE1 doub N N 252 GLU CD OE2 sing N N 253 GLU OE2 HE2 sing N N 254 GLU OXT HXT sing N N 255 GLY N CA sing N N 256 GLY N H sing N N 257 GLY N H2 sing N N 258 GLY CA C sing N N 259 GLY CA HA2 sing N N 260 GLY CA HA3 sing N N 261 GLY C O doub N N 262 GLY C OXT sing N N 263 GLY OXT HXT sing N N 264 HIS N CA sing N N 265 HIS N H sing N N 266 HIS N H2 sing N N 267 HIS CA C sing N N 268 HIS CA CB sing N N 269 HIS CA HA sing N N 270 HIS C O doub N N 271 HIS C OXT sing N N 272 HIS CB CG sing N N 273 HIS CB HB2 sing N N 274 HIS CB HB3 sing N N 275 HIS CG ND1 sing Y N 276 HIS CG CD2 doub Y N 277 HIS ND1 CE1 doub Y N 278 HIS ND1 HD1 sing N N 279 HIS CD2 NE2 sing Y N 280 HIS CD2 HD2 sing N N 281 HIS CE1 NE2 sing Y N 282 HIS CE1 HE1 sing N N 283 HIS NE2 HE2 sing N N 284 HIS OXT HXT sing N N 285 HOH O H1 sing N N 286 HOH O H2 sing N N 287 ILE N CA sing N N 288 ILE N H sing N N 289 ILE N H2 sing N N 290 ILE CA C sing N N 291 ILE CA CB sing N N 292 ILE CA HA sing N N 293 ILE C O doub N N 294 ILE C OXT sing N N 295 ILE CB CG1 sing N N 296 ILE CB CG2 sing N N 297 ILE CB HB sing N N 298 ILE CG1 CD1 sing N N 299 ILE CG1 HG12 sing N N 300 ILE CG1 HG13 sing N N 301 ILE CG2 HG21 sing N N 302 ILE CG2 HG22 sing N N 303 ILE CG2 HG23 sing N N 304 ILE CD1 HD11 sing N N 305 ILE CD1 HD12 sing N N 306 ILE CD1 HD13 sing N N 307 ILE OXT HXT sing N N 308 LEU N CA sing N N 309 LEU N H sing N N 310 LEU N H2 sing N N 311 LEU CA C sing N N 312 LEU CA CB sing N N 313 LEU CA HA sing N N 314 LEU C O doub N N 315 LEU C OXT sing N N 316 LEU CB CG sing N N 317 LEU CB HB2 sing N N 318 LEU CB HB3 sing N N 319 LEU CG CD1 sing N N 320 LEU CG CD2 sing N N 321 LEU CG HG sing N N 322 LEU CD1 HD11 sing N N 323 LEU CD1 HD12 sing N N 324 LEU CD1 HD13 sing N N 325 LEU CD2 HD21 sing N N 326 LEU CD2 HD22 sing N N 327 LEU CD2 HD23 sing N N 328 LEU OXT HXT sing N N 329 LYS N CA sing N N 330 LYS N H sing N N 331 LYS N H2 sing N N 332 LYS CA C sing N N 333 LYS CA CB sing N N 334 LYS CA HA sing N N 335 LYS C O doub N N 336 LYS C OXT sing N N 337 LYS CB CG sing N N 338 LYS CB HB2 sing N N 339 LYS CB HB3 sing N N 340 LYS CG CD sing N N 341 LYS CG HG2 sing N N 342 LYS CG HG3 sing N N 343 LYS CD CE sing N N 344 LYS CD HD2 sing N N 345 LYS CD HD3 sing N N 346 LYS CE NZ sing N N 347 LYS CE HE2 sing N N 348 LYS CE HE3 sing N N 349 LYS NZ HZ1 sing N N 350 LYS NZ HZ2 sing N N 351 LYS NZ HZ3 sing N N 352 LYS OXT HXT sing N N 353 MET N CA sing N N 354 MET N H sing N N 355 MET N H2 sing N N 356 MET CA C sing N N 357 MET CA CB sing N N 358 MET CA HA sing N N 359 MET C O doub N N 360 MET C OXT sing N N 361 MET CB CG sing N N 362 MET CB HB2 sing N N 363 MET CB HB3 sing N N 364 MET CG SD sing N N 365 MET CG HG2 sing N N 366 MET CG HG3 sing N N 367 MET SD CE sing N N 368 MET CE HE1 sing N N 369 MET CE HE2 sing N N 370 MET CE HE3 sing N N 371 MET OXT HXT sing N N 372 OLA C1 O1 doub N N 373 OLA C1 O2 sing N N 374 OLA C1 C2 sing N N 375 OLA O2 HO2 sing N N 376 OLA C2 C3 sing N N 377 OLA C2 H21 sing N N 378 OLA C2 H22 sing N N 379 OLA C3 C4 sing N N 380 OLA C3 H31 sing N N 381 OLA C3 H32 sing N N 382 OLA C4 C5 sing N N 383 OLA C4 H41 sing N N 384 OLA C4 H42 sing N N 385 OLA C5 C6 sing N N 386 OLA C5 H51 sing N N 387 OLA C5 H52 sing N N 388 OLA C6 C7 sing N N 389 OLA C6 H61 sing N N 390 OLA C6 H62 sing N N 391 OLA C7 C8 sing N N 392 OLA C7 H71 sing N N 393 OLA C7 H72 sing N N 394 OLA C8 C9 sing N N 395 OLA C8 H81 sing N N 396 OLA C8 H82 sing N N 397 OLA C9 C10 doub N Z 398 OLA C9 H9 sing N N 399 OLA C10 C11 sing N N 400 OLA C10 H10 sing N N 401 OLA C11 C12 sing N N 402 OLA C11 H111 sing N N 403 OLA C11 H112 sing N N 404 OLA C12 C13 sing N N 405 OLA C12 H121 sing N N 406 OLA C12 H122 sing N N 407 OLA C13 C14 sing N N 408 OLA C13 H131 sing N N 409 OLA C13 H132 sing N N 410 OLA C14 C15 sing N N 411 OLA C14 H141 sing N N 412 OLA C14 H142 sing N N 413 OLA C15 C16 sing N N 414 OLA C15 H151 sing N N 415 OLA C15 H152 sing N N 416 OLA C16 C17 sing N N 417 OLA C16 H161 sing N N 418 OLA C16 H162 sing N N 419 OLA C17 C18 sing N N 420 OLA C17 H171 sing N N 421 OLA C17 H172 sing N N 422 OLA C18 H181 sing N N 423 OLA C18 H182 sing N N 424 OLA C18 H183 sing N N 425 PHE N CA sing N N 426 PHE N H sing N N 427 PHE N H2 sing N N 428 PHE CA C sing N N 429 PHE CA CB sing N N 430 PHE CA HA sing N N 431 PHE C O doub N N 432 PHE C OXT sing N N 433 PHE CB CG sing N N 434 PHE CB HB2 sing N N 435 PHE CB HB3 sing N N 436 PHE CG CD1 doub Y N 437 PHE CG CD2 sing Y N 438 PHE CD1 CE1 sing Y N 439 PHE CD1 HD1 sing N N 440 PHE CD2 CE2 doub Y N 441 PHE CD2 HD2 sing N N 442 PHE CE1 CZ doub Y N 443 PHE CE1 HE1 sing N N 444 PHE CE2 CZ sing Y N 445 PHE CE2 HE2 sing N N 446 PHE CZ HZ sing N N 447 PHE OXT HXT sing N N 448 PRO N CA sing N N 449 PRO N CD sing N N 450 PRO N H sing N N 451 PRO CA C sing N N 452 PRO CA CB sing N N 453 PRO CA HA sing N N 454 PRO C O doub N N 455 PRO C OXT sing N N 456 PRO CB CG sing N N 457 PRO CB HB2 sing N N 458 PRO CB HB3 sing N N 459 PRO CG CD sing N N 460 PRO CG HG2 sing N N 461 PRO CG HG3 sing N N 462 PRO CD HD2 sing N N 463 PRO CD HD3 sing N N 464 PRO OXT HXT sing N N 465 SER N CA sing N N 466 SER N H sing N N 467 SER N H2 sing N N 468 SER CA C sing N N 469 SER CA CB sing N N 470 SER CA HA sing N N 471 SER C O doub N N 472 SER C OXT sing N N 473 SER CB OG sing N N 474 SER CB HB2 sing N N 475 SER CB HB3 sing N N 476 SER OG HG sing N N 477 SER OXT HXT sing N N 478 SO4 S O1 doub N N 479 SO4 S O2 doub N N 480 SO4 S O3 sing N N 481 SO4 S O4 sing N N 482 THR N CA sing N N 483 THR N H sing N N 484 THR N H2 sing N N 485 THR CA C sing N N 486 THR CA CB sing N N 487 THR CA HA sing N N 488 THR C O doub N N 489 THR C OXT sing N N 490 THR CB OG1 sing N N 491 THR CB CG2 sing N N 492 THR CB HB sing N N 493 THR OG1 HG1 sing N N 494 THR CG2 HG21 sing N N 495 THR CG2 HG22 sing N N 496 THR CG2 HG23 sing N N 497 THR OXT HXT sing N N 498 TRP N CA sing N N 499 TRP N H sing N N 500 TRP N H2 sing N N 501 TRP CA C sing N N 502 TRP CA CB sing N N 503 TRP CA HA sing N N 504 TRP C O doub N N 505 TRP C OXT sing N N 506 TRP CB CG sing N N 507 TRP CB HB2 sing N N 508 TRP CB HB3 sing N N 509 TRP CG CD1 doub Y N 510 TRP CG CD2 sing Y N 511 TRP CD1 NE1 sing Y N 512 TRP CD1 HD1 sing N N 513 TRP CD2 CE2 doub Y N 514 TRP CD2 CE3 sing Y N 515 TRP NE1 CE2 sing Y N 516 TRP NE1 HE1 sing N N 517 TRP CE2 CZ2 sing Y N 518 TRP CE3 CZ3 doub Y N 519 TRP CE3 HE3 sing N N 520 TRP CZ2 CH2 doub Y N 521 TRP CZ2 HZ2 sing N N 522 TRP CZ3 CH2 sing Y N 523 TRP CZ3 HZ3 sing N N 524 TRP CH2 HH2 sing N N 525 TRP OXT HXT sing N N 526 TYR N CA sing N N 527 TYR N H sing N N 528 TYR N H2 sing N N 529 TYR CA C sing N N 530 TYR CA CB sing N N 531 TYR CA HA sing N N 532 TYR C O doub N N 533 TYR C OXT sing N N 534 TYR CB CG sing N N 535 TYR CB HB2 sing N N 536 TYR CB HB3 sing N N 537 TYR CG CD1 doub Y N 538 TYR CG CD2 sing Y N 539 TYR CD1 CE1 sing Y N 540 TYR CD1 HD1 sing N N 541 TYR CD2 CE2 doub Y N 542 TYR CD2 HD2 sing N N 543 TYR CE1 CZ doub Y N 544 TYR CE1 HE1 sing N N 545 TYR CE2 CZ sing Y N 546 TYR CE2 HE2 sing N N 547 TYR CZ OH sing N N 548 TYR OH HH sing N N 549 TYR OXT HXT sing N N 550 VAL N CA sing N N 551 VAL N H sing N N 552 VAL N H2 sing N N 553 VAL CA C sing N N 554 VAL CA CB sing N N 555 VAL CA HA sing N N 556 VAL C O doub N N 557 VAL C OXT sing N N 558 VAL CB CG1 sing N N 559 VAL CB CG2 sing N N 560 VAL CB HB sing N N 561 VAL CG1 HG11 sing N N 562 VAL CG1 HG12 sing N N 563 VAL CG1 HG13 sing N N 564 VAL CG2 HG21 sing N N 565 VAL CG2 HG22 sing N N 566 VAL CG2 HG23 sing N N 567 VAL OXT HXT sing N N 568 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3LSP 'double helix' 3LSP 'a-form double helix' 3LSP 'b-form double helix' 3LSP 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DG 7 1_555 C DG 26 6_555 -0.298 -0.564 0.352 4.357 6.455 -7.736 1 D_DG6:DG25_D D 6 ? D 25 ? 3 1 1 C DG 9 1_555 C DC 24 6_555 -0.548 0.066 1.885 18.234 -12.629 0.630 2 D_DG8:DC23_D D 8 ? D 23 ? ? 1 1 C DT 10 1_555 C DA 23 6_555 -0.339 0.335 0.720 -29.092 -7.803 -7.157 3 D_DT9:DA22_D D 9 ? D 22 ? 20 1 1 C DA 12 1_555 C DT 21 6_555 -0.317 -0.162 -1.054 -22.081 -27.262 -1.455 4 D_DA11:DT20_D D 11 ? D 20 ? 20 1 1 C DA 13 1_555 C DT 20 6_555 0.306 0.043 -1.481 -4.373 -22.854 -1.510 5 D_DA12:DT19_D D 12 ? D 19 ? 20 1 1 C DC 14 1_555 C DG 19 6_555 0.878 0.229 -0.468 17.154 -19.640 11.060 6 D_DC13:DG18_D D 13 ? D 18 ? ? 1 1 C DA 16 1_555 C DG 17 6_555 0.105 0.212 0.382 3.544 3.461 6.098 7 D_DA15:DG16_D D 15 ? D 16 ? ? 1 1 C DG 17 1_555 C DA 16 6_555 -0.105 0.212 0.382 -3.544 3.461 6.098 8 D_DG16:DA15_D D 16 ? D 15 ? ? 1 1 C DG 19 1_555 C DC 14 6_555 -0.878 0.229 -0.468 -17.154 -19.640 11.060 9 D_DG18:DC13_D D 18 ? D 13 ? ? 1 1 C DT 20 1_555 C DA 13 6_555 -0.306 0.043 -1.481 4.373 -22.854 -1.510 10 D_DT19:DA12_D D 19 ? D 12 ? 20 1 1 C DT 21 1_555 C DA 12 6_555 0.317 -0.162 -1.054 22.081 -27.262 -1.455 11 D_DT20:DA11_D D 20 ? D 11 ? 20 1 1 C DA 23 1_555 C DT 10 6_555 0.339 0.335 0.720 29.092 -7.803 -7.157 12 D_DA22:DT9_D D 22 ? D 9 ? 20 1 1 C DC 24 1_555 C DG 9 6_555 0.548 0.066 1.885 -18.234 -12.629 0.630 13 D_DC23:DG8_D D 23 ? D 8 ? ? 1 1 C DG 26 1_555 C DG 7 6_555 0.298 -0.564 0.352 -4.357 6.455 -7.736 14 D_DG25:DG6_D D 25 ? D 6 ? 3 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DG 7 1_555 C DG 26 6_555 C DG 9 1_555 C DC 24 6_555 0.636 0.216 6.108 -7.554 2.327 67.810 0.029 -1.096 6.021 2.078 6.748 68.214 1 DD_DG6DG8:DC23DG25_DD D 6 ? D 25 ? D 8 ? D 23 ? 1 C DG 9 1_555 C DC 24 6_555 C DT 10 1_555 C DA 23 6_555 -0.619 -2.159 4.549 4.644 2.018 37.049 -3.731 1.800 4.323 3.157 -7.267 37.381 2 DD_DG8DT9:DA22DC23_DD D 8 ? D 23 ? D 9 ? D 22 ? 1 C DT 10 1_555 C DA 23 6_555 C DA 12 1_555 C DT 21 6_555 -0.989 0.165 6.829 0.521 11.468 61.772 -0.923 1.000 6.755 11.067 -0.503 62.726 3 DD_DT9DA11:DT20DA22_DD D 9 ? D 22 ? D 11 ? D 20 ? 1 C DA 12 1_555 C DT 21 6_555 C DA 13 1_555 C DT 20 6_555 0.378 -0.032 2.831 1.281 -3.121 37.919 0.294 -0.438 2.835 -4.792 -1.967 38.064 4 DD_DA11DA12:DT19DT20_DD D 11 ? D 20 ? D 12 ? D 19 ? 1 C DA 13 1_555 C DT 20 6_555 C DC 14 1_555 C DG 19 6_555 0.384 -0.113 3.001 -0.745 -3.653 37.340 0.263 -0.686 2.990 -5.688 1.160 37.519 5 DD_DA12DC13:DG18DT19_DD D 12 ? D 19 ? D 13 ? D 18 ? 1 C DC 14 1_555 C DG 19 6_555 C DA 16 1_555 C DG 17 6_555 2.656 -0.848 6.643 8.621 15.970 56.520 -2.546 -1.781 6.520 16.403 -8.854 59.133 6 DD_DC13DA15:DG16DG18_DD D 13 ? D 18 ? D 15 ? D 16 ? 1 C DA 16 1_555 C DG 17 6_555 C DG 17 1_555 C DA 16 6_555 0.000 -0.421 3.289 0.000 10.065 39.437 -1.714 0.000 3.095 14.627 0.000 40.651 7 DD_DA15DG16:DA15DG16_DD D 15 ? D 16 ? D 16 ? D 15 ? 1 C DG 17 1_555 C DA 16 6_555 C DG 19 1_555 C DC 14 6_555 -2.656 -0.848 6.643 -8.621 15.970 56.520 -2.546 1.781 6.520 16.403 8.854 59.133 8 DD_DG16DG18:DC13DA15_DD D 16 ? D 15 ? D 18 ? D 13 ? 1 C DG 19 1_555 C DC 14 6_555 C DT 20 1_555 C DA 13 6_555 -0.384 -0.113 3.001 0.745 -3.653 37.340 0.263 0.686 2.990 -5.688 -1.160 37.519 9 DD_DG18DT19:DA12DC13_DD D 18 ? D 13 ? D 19 ? D 12 ? 1 C DT 20 1_555 C DA 13 6_555 C DT 21 1_555 C DA 12 6_555 -0.378 -0.032 2.831 -1.281 -3.121 37.919 0.294 0.438 2.835 -4.792 1.967 38.064 10 DD_DT19DT20:DA11DA12_DD D 19 ? D 12 ? D 20 ? D 11 ? 1 C DT 21 1_555 C DA 12 6_555 C DA 23 1_555 C DT 10 6_555 0.989 0.165 6.829 -0.521 11.468 61.772 -0.923 -1.000 6.755 11.067 0.503 62.726 11 DD_DT20DA22:DT9DA11_DD D 20 ? D 11 ? D 22 ? D 9 ? 1 C DA 23 1_555 C DT 10 6_555 C DC 24 1_555 C DG 9 6_555 0.619 -2.159 4.549 -4.644 2.018 37.049 -3.731 -1.800 4.323 3.157 7.267 37.381 12 DD_DA22DC23:DG8DT9_DD D 22 ? D 9 ? D 23 ? D 8 ? 1 C DC 24 1_555 C DG 9 6_555 C DG 26 1_555 C DG 7 6_555 -0.636 0.216 6.108 7.554 2.327 67.810 0.029 1.096 6.021 2.078 -6.748 68.214 13 DD_DC23DG25:DG6DG8_DD D 23 ? D 8 ? D 25 ? D 6 ? # _atom_sites.entry_id 3LSP _atom_sites.fract_transf_matrix[1][1] 0.012758 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012758 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006757 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_