HEADER LIGASE 12-FEB-10 3LSS TITLE TRYPANOSOMA BRUCEI SERYL-TRNA SYNTHETASE IN COMPLEX WITH ATP COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERYL-TRNA SYNTHETASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 6.1.1.11; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRYPANOSOMA BRUCEI; SOURCE 3 ORGANISM_TAXID: 5691; SOURCE 4 GENE: SERRS, TB11.02.5020; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: AVA0421 KEYWDS AMINOACYL-TRNA SYNTHETASE, TRNA LIGASE, AARS, SERRS, TRANSLATION, KEYWDS 2 ATP-BINDING, NUCLEOTIDE-BINDING, STRUCTURAL GENOMICS, MEDICAL KEYWDS 3 STRUCTURAL GENOMICS OF PATHOGENIC PROTOZOA, MSGPP, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR E.T.LARSON,E.A.MERRITT,MEDICAL STRUCTURAL GENOMICS OF PATHOGENIC AUTHOR 2 PROTOZOA (MSGPP) REVDAT 3 06-SEP-23 3LSS 1 REMARK SEQADV LINK REVDAT 2 01-NOV-17 3LSS 1 REMARK REVDAT 1 02-MAR-10 3LSS 0 JRNL AUTH E.T.LARSON,L.ZHANG,A.NAPULI,N.MUELLER,C.L.M.J.VERLINDE, JRNL AUTH 2 W.C.VAN VOORHIS,F.S.BUCKNER,E.FAN,W.G.J.HOL,E.A.MERRITT JRNL TITL X-RAY CRYSTAL STRUCTURE OF SERYL-TRNA SYNTHETASE FROM THE JRNL TITL 2 EUKARYOTIC PARASITE TRYPANOSOMA BRUCEI. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.57 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 106719 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 5392 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 7382 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.45 REMARK 3 BIN R VALUE (WORKING SET) : 0.2470 REMARK 3 BIN FREE R VALUE SET COUNT : 394 REMARK 3 BIN FREE R VALUE : 0.2800 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7160 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 77 REMARK 3 SOLVENT ATOMS : 341 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.14000 REMARK 3 B22 (A**2) : 1.14000 REMARK 3 B33 (A**2) : -1.72000 REMARK 3 B12 (A**2) : 0.57000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.110 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.106 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.077 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.944 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.952 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7466 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 5188 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10073 ; 1.331 ; 1.973 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12632 ; 0.863 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 906 ; 6.111 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 360 ;38.025 ;24.250 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1391 ;13.065 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 59 ;14.559 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1113 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8205 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1496 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4522 ; 2.070 ; 4.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1844 ; 0.659 ; 4.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7307 ; 3.252 ; 6.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2944 ; 3.850 ; 6.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2764 ; 5.824 ;10.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -2 A 48 REMARK 3 ORIGIN FOR THE GROUP (A): 40.2195 19.3642 88.5994 REMARK 3 T TENSOR REMARK 3 T11: 0.2858 T22: 0.4172 REMARK 3 T33: 0.3022 T12: -0.0907 REMARK 3 T13: 0.0492 T23: -0.1245 REMARK 3 L TENSOR REMARK 3 L11: 7.1521 L22: 0.1815 REMARK 3 L33: 6.7496 L12: 0.4130 REMARK 3 L13: 6.1345 L23: 0.6885 REMARK 3 S TENSOR REMARK 3 S11: 0.1312 S12: -0.1120 S13: 0.0715 REMARK 3 S21: 0.1143 S22: 0.1451 S23: -0.0821 REMARK 3 S31: -0.0577 S32: 0.6422 S33: -0.2763 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 49 A 119 REMARK 3 ORIGIN FOR THE GROUP (A): 61.5106 18.6790 117.7332 REMARK 3 T TENSOR REMARK 3 T11: 0.6404 T22: 1.0013 REMARK 3 T33: 0.3227 T12: 0.1940 REMARK 3 T13: 0.0415 T23: -0.2843 REMARK 3 L TENSOR REMARK 3 L11: 8.1862 L22: 7.1661 REMARK 3 L33: 19.4534 L12: -3.9679 REMARK 3 L13: 7.9200 L23: -7.3560 REMARK 3 S TENSOR REMARK 3 S11: 0.1021 S12: 0.1413 S13: -0.9474 REMARK 3 S21: 0.0722 S22: 0.4069 S23: -0.4420 REMARK 3 S31: 1.7030 S32: 2.1998 S33: -0.5090 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 120 A 156 REMARK 3 ORIGIN FOR THE GROUP (A): 31.7741 25.2372 85.4568 REMARK 3 T TENSOR REMARK 3 T11: 0.3110 T22: 0.2305 REMARK 3 T33: 0.3034 T12: -0.0829 REMARK 3 T13: 0.0076 T23: -0.0826 REMARK 3 L TENSOR REMARK 3 L11: 9.4575 L22: 0.9500 REMARK 3 L33: 4.6910 L12: 1.2853 REMARK 3 L13: 3.8953 L23: 1.0933 REMARK 3 S TENSOR REMARK 3 S11: -0.3759 S12: -0.1525 S13: 0.9506 REMARK 3 S21: -0.0601 S22: 0.0845 S23: -0.1410 REMARK 3 S31: -0.7817 S32: 0.6085 S33: 0.2915 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 157 A 253 REMARK 3 ORIGIN FOR THE GROUP (A): 7.5425 36.4097 93.6043 REMARK 3 T TENSOR REMARK 3 T11: 0.1352 T22: 0.0606 REMARK 3 T33: 0.1335 T12: -0.0067 REMARK 3 T13: 0.0336 T23: 0.0016 REMARK 3 L TENSOR REMARK 3 L11: 0.7801 L22: 1.2524 REMARK 3 L33: 1.8548 L12: -0.0959 REMARK 3 L13: 0.4664 L23: -0.0581 REMARK 3 S TENSOR REMARK 3 S11: -0.0470 S12: 0.0908 S13: 0.0792 REMARK 3 S21: -0.0976 S22: 0.0457 S23: -0.1633 REMARK 3 S31: -0.1356 S32: 0.2524 S33: 0.0013 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 254 A 305 REMARK 3 ORIGIN FOR THE GROUP (A): 17.9762 28.9730 100.0969 REMARK 3 T TENSOR REMARK 3 T11: 0.1299 T22: 0.1377 REMARK 3 T33: 0.1066 T12: -0.0024 REMARK 3 T13: 0.0168 T23: -0.0228 REMARK 3 L TENSOR REMARK 3 L11: 3.5120 L22: 6.3453 REMARK 3 L33: 1.3439 L12: -1.9261 REMARK 3 L13: -0.0948 L23: -0.1954 REMARK 3 S TENSOR REMARK 3 S11: 0.0577 S12: 0.0838 S13: 0.2425 REMARK 3 S21: -0.2509 S22: -0.0473 S23: -0.2569 REMARK 3 S31: -0.0319 S32: 0.3202 S33: -0.0103 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 306 A 404 REMARK 3 ORIGIN FOR THE GROUP (A): 12.8814 23.4056 88.1861 REMARK 3 T TENSOR REMARK 3 T11: 0.1493 T22: 0.0428 REMARK 3 T33: 0.1200 T12: 0.0049 REMARK 3 T13: -0.0024 T23: -0.0025 REMARK 3 L TENSOR REMARK 3 L11: 1.2382 L22: 0.6159 REMARK 3 L33: 1.0764 L12: -0.2762 REMARK 3 L13: 0.3370 L23: 0.1655 REMARK 3 S TENSOR REMARK 3 S11: -0.0242 S12: 0.0645 S13: 0.0088 REMARK 3 S21: -0.0398 S22: 0.0282 S23: -0.1018 REMARK 3 S31: -0.0133 S32: 0.1731 S33: -0.0041 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 405 A 467 REMARK 3 ORIGIN FOR THE GROUP (A): 2.0356 29.1720 91.9819 REMARK 3 T TENSOR REMARK 3 T11: 0.1204 T22: 0.0123 REMARK 3 T33: 0.0408 T12: -0.0261 REMARK 3 T13: 0.0033 T23: -0.0128 REMARK 3 L TENSOR REMARK 3 L11: 1.6515 L22: 2.1166 REMARK 3 L33: 1.8159 L12: -0.7774 REMARK 3 L13: -0.0039 L23: -0.2369 REMARK 3 S TENSOR REMARK 3 S11: -0.0115 S12: -0.0871 S13: 0.1495 REMARK 3 S21: -0.0632 S22: 0.0417 S23: 0.0220 REMARK 3 S31: -0.0253 S32: -0.0358 S33: -0.0302 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -2 B 46 REMARK 3 ORIGIN FOR THE GROUP (A): 7.0762 74.3879 119.6893 REMARK 3 T TENSOR REMARK 3 T11: 0.8588 T22: 0.2536 REMARK 3 T33: 0.3216 T12: -0.1526 REMARK 3 T13: 0.1788 T23: -0.0251 REMARK 3 L TENSOR REMARK 3 L11: 3.0502 L22: 7.3696 REMARK 3 L33: 6.4750 L12: 4.6835 REMARK 3 L13: -4.2614 L23: -6.2488 REMARK 3 S TENSOR REMARK 3 S11: 0.0232 S12: -0.0162 S13: -0.1452 REMARK 3 S21: -0.0117 S22: 0.0271 S23: -0.4050 REMARK 3 S31: -0.1575 S32: 0.1084 S33: -0.0503 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 47 B 120 REMARK 3 ORIGIN FOR THE GROUP (A): 19.6091 95.2161 93.5642 REMARK 3 T TENSOR REMARK 3 T11: 0.1353 T22: 0.0897 REMARK 3 T33: 0.1442 T12: -0.0834 REMARK 3 T13: 0.0157 T23: -0.0519 REMARK 3 L TENSOR REMARK 3 L11: 1.7840 L22: 7.0896 REMARK 3 L33: 5.7789 L12: 0.8062 REMARK 3 L13: -0.9175 L23: -2.0993 REMARK 3 S TENSOR REMARK 3 S11: 0.0451 S12: -0.1646 S13: 0.0838 REMARK 3 S21: 0.4951 S22: -0.1785 S23: 0.3098 REMARK 3 S31: 0.0364 S32: -0.1050 S33: 0.1334 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 121 B 153 REMARK 3 ORIGIN FOR THE GROUP (A): 7.9860 65.2943 121.4505 REMARK 3 T TENSOR REMARK 3 T11: 0.6640 T22: 0.2816 REMARK 3 T33: 0.2384 T12: -0.0248 REMARK 3 T13: 0.0159 T23: -0.0023 REMARK 3 L TENSOR REMARK 3 L11: 5.2684 L22: 6.6105 REMARK 3 L33: 6.9701 L12: 4.0918 REMARK 3 L13: -4.9750 L23: -4.2204 REMARK 3 S TENSOR REMARK 3 S11: 0.2700 S12: -0.5363 S13: -0.3156 REMARK 3 S21: 0.1487 S22: -0.5360 S23: -0.8535 REMARK 3 S31: -0.3973 S32: 1.0818 S33: 0.2660 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 154 B 253 REMARK 3 ORIGIN FOR THE GROUP (A): 5.3962 38.7461 114.0043 REMARK 3 T TENSOR REMARK 3 T11: 0.1746 T22: 0.0847 REMARK 3 T33: 0.1119 T12: 0.0200 REMARK 3 T13: -0.0029 T23: -0.0082 REMARK 3 L TENSOR REMARK 3 L11: 0.9808 L22: 1.1736 REMARK 3 L33: 1.8170 L12: -0.1742 REMARK 3 L13: -0.0467 L23: -0.1660 REMARK 3 S TENSOR REMARK 3 S11: -0.0500 S12: -0.1742 S13: 0.0498 REMARK 3 S21: 0.2028 S22: 0.0876 S23: -0.1342 REMARK 3 S31: -0.1930 S32: 0.1825 S33: -0.0376 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 254 B 314 REMARK 3 ORIGIN FOR THE GROUP (A): 5.7923 49.2714 108.7515 REMARK 3 T TENSOR REMARK 3 T11: 0.2243 T22: 0.0726 REMARK 3 T33: 0.0957 T12: -0.0102 REMARK 3 T13: -0.0024 T23: -0.0334 REMARK 3 L TENSOR REMARK 3 L11: 2.9966 L22: 6.3688 REMARK 3 L33: 1.9036 L12: -2.6885 REMARK 3 L13: 0.4676 L23: -1.4902 REMARK 3 S TENSOR REMARK 3 S11: -0.2499 S12: -0.2408 S13: 0.0915 REMARK 3 S21: 0.4475 S22: 0.2346 S23: -0.3041 REMARK 3 S31: -0.3939 S32: 0.1163 S33: 0.0153 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 315 B 409 REMARK 3 ORIGIN FOR THE GROUP (A): -5.0689 51.7208 117.7346 REMARK 3 T TENSOR REMARK 3 T11: 0.3043 T22: 0.0859 REMARK 3 T33: 0.1332 T12: 0.0717 REMARK 3 T13: 0.0337 T23: 0.0275 REMARK 3 L TENSOR REMARK 3 L11: 0.2762 L22: 1.6115 REMARK 3 L33: 2.6106 L12: 0.4281 REMARK 3 L13: -0.3938 L23: -1.9584 REMARK 3 S TENSOR REMARK 3 S11: 0.0101 S12: -0.0347 S13: 0.0453 REMARK 3 S21: 0.4369 S22: 0.0384 S23: 0.0289 REMARK 3 S31: -0.5344 S32: -0.0406 S33: -0.0485 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 410 B 465 REMARK 3 ORIGIN FOR THE GROUP (A): -3.3894 36.9754 114.9035 REMARK 3 T TENSOR REMARK 3 T11: 0.1272 T22: 0.0745 REMARK 3 T33: 0.0666 T12: 0.0547 REMARK 3 T13: 0.0315 T23: 0.0157 REMARK 3 L TENSOR REMARK 3 L11: 1.3710 L22: 2.0084 REMARK 3 L33: 2.4737 L12: -0.8192 REMARK 3 L13: 0.4537 L23: -0.6220 REMARK 3 S TENSOR REMARK 3 S11: -0.0920 S12: -0.0964 S13: -0.1495 REMARK 3 S21: 0.2332 S22: 0.1829 S23: -0.1092 REMARK 3 S31: -0.0615 S32: -0.0883 S33: -0.0909 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES: WITH TLS ADDED REMARK 4 REMARK 4 3LSS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-FEB-10. REMARK 100 THE DEPOSITION ID IS D_1000057684. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-MAR-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 106754 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 5.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 8.000 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : 0.80800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: PDB ENTRY 3LSQ REMARK 200 REMARK 200 REMARK: THE STRUCTURE FACTOR FILE CONTAINS FRIEDEL PAIRS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1 UL 11 MG/ML PROTEIN IN SGPP BUFFER REMARK 280 MIXED WITH 0.5 UL 2.4 M SODIUM MALONATE; CRYSTAL THEN SOAKED IN REMARK 280 3.4 M SODIUM MALONATE (PH 7.0) SUPPLEMENTED WITH 10 MM ATP FOR REMARK 280 25 MINUTES BEFORE FREEZING., SITTING DROP VAPOR DIFFUSION, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 87.82600 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 50.70636 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 82.83933 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 87.82600 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 50.70636 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 82.83933 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 87.82600 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 50.70636 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 82.83933 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 87.82600 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 50.70636 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 82.83933 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 87.82600 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 50.70636 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 82.83933 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 87.82600 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 50.70636 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 82.83933 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 101.41273 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 165.67867 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 101.41273 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 165.67867 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 101.41273 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 165.67867 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 101.41273 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 165.67867 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 101.41273 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 165.67867 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 101.41273 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 165.67867 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 PRO A -3 REMARK 465 ASP A 72 REMARK 465 GLY A 73 REMARK 465 ASP A 74 REMARK 465 THR A 75 REMARK 465 SER A 76 REMARK 465 GLU A 77 REMARK 465 ILE A 78 REMARK 465 PRO A 79 REMARK 465 PRO A 80 REMARK 465 GLN A 81 REMARK 465 VAL A 82 REMARK 465 LYS A 83 REMARK 465 GLU A 84 REMARK 465 ALA A 85 REMARK 465 TYR A 86 REMARK 465 GLU A 87 REMARK 465 ASN A 88 REMARK 465 GLY A 89 REMARK 465 THR A 90 REMARK 465 LEU A 91 REMARK 465 LYS A 92 REMARK 465 GLY A 93 REMARK 465 GLU A 94 REMARK 465 GLN A 95 REMARK 465 VAL A 96 REMARK 465 GLU A 97 REMARK 465 GLN A 98 REMARK 465 LEU A 99 REMARK 465 GLY A 409 REMARK 465 THR A 410 REMARK 465 ALA A 411 REMARK 465 ALA A 412 REMARK 465 ALA A 468 REMARK 465 GLN A 469 REMARK 465 ALA A 470 REMARK 465 GLU A 471 REMARK 465 GLY A 472 REMARK 465 THR A 473 REMARK 465 THR A 474 REMARK 465 PRO A 475 REMARK 465 ASP A 476 REMARK 465 LYS A 477 REMARK 465 GLY A 478 REMARK 465 GLU A 479 REMARK 465 GLY B -4 REMARK 465 PRO B -3 REMARK 465 ASN B 466 REMARK 465 ASN B 467 REMARK 465 ALA B 468 REMARK 465 GLN B 469 REMARK 465 ALA B 470 REMARK 465 GLU B 471 REMARK 465 GLY B 472 REMARK 465 THR B 473 REMARK 465 THR B 474 REMARK 465 PRO B 475 REMARK 465 ASP B 476 REMARK 465 LYS B 477 REMARK 465 GLY B 478 REMARK 465 GLU B 479 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 303 -77.82 -67.30 REMARK 500 ASP A 304 -94.51 -89.32 REMARK 500 THR A 305 -8.76 80.05 REMARK 500 THR A 392 -123.16 37.53 REMARK 500 ASP B 304 -66.89 -93.42 REMARK 500 THR B 305 -48.53 81.80 REMARK 500 LYS B 368 146.48 -170.89 REMARK 500 THR B 392 -115.21 32.32 REMARK 500 ALA B 411 -160.49 -79.52 REMARK 500 ALA B 412 108.38 -54.30 REMARK 500 MET B 456 59.99 -140.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 600 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 162 OD1 REMARK 620 2 THR A 164 OG1 78.0 REMARK 620 3 HOH A 895 O 97.3 82.8 REMARK 620 4 HOH A 917 O 96.1 166.7 86.2 REMARK 620 5 HOH A 963 O 176.8 98.8 81.8 86.9 REMARK 620 6 HOH A 964 O 91.4 113.8 162.6 77.9 90.3 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLI A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLI A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP B 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3LSQ RELATED DB: PDB REMARK 900 APO STRUCTURE OF SAME PROTEIN DBREF 3LSS A 1 479 UNP Q384V4 Q384V4_9TRYP 1 479 DBREF 3LSS B 1 479 UNP Q384V4 Q384V4_9TRYP 1 479 SEQADV 3LSS GLY A -4 UNP Q384V4 EXPRESSION TAG SEQADV 3LSS PRO A -3 UNP Q384V4 EXPRESSION TAG SEQADV 3LSS GLY A -2 UNP Q384V4 EXPRESSION TAG SEQADV 3LSS SER A -1 UNP Q384V4 EXPRESSION TAG SEQADV 3LSS MET A 0 UNP Q384V4 EXPRESSION TAG SEQADV 3LSS GLY B -4 UNP Q384V4 EXPRESSION TAG SEQADV 3LSS PRO B -3 UNP Q384V4 EXPRESSION TAG SEQADV 3LSS GLY B -2 UNP Q384V4 EXPRESSION TAG SEQADV 3LSS SER B -1 UNP Q384V4 EXPRESSION TAG SEQADV 3LSS MET B 0 UNP Q384V4 EXPRESSION TAG SEQRES 1 A 484 GLY PRO GLY SER MET MET VAL LEU ASP ILE GLN LEU PHE SEQRES 2 A 484 ARG ASP GLU THR GLY ALA ASN ILE ILE ARG GLU SER GLN SEQRES 3 A 484 ARG ARG ARG PHE ALA ASP PRO ASP ILE VAL ASP ALA ILE SEQRES 4 A 484 ILE GLU ALA ASP LYS LYS TRP ARG ARG THR GLN PHE LEU SEQRES 5 A 484 THR GLU ALA SER LYS LYS LEU ILE ASN ILE CYS SER LYS SEQRES 6 A 484 ALA VAL GLY ALA LYS LYS LYS ALA LYS GLU ALA ASP GLY SEQRES 7 A 484 ASP THR SER GLU ILE PRO PRO GLN VAL LYS GLU ALA TYR SEQRES 8 A 484 GLU ASN GLY THR LEU LYS GLY GLU GLN VAL GLU GLN LEU SEQRES 9 A 484 CYS VAL LEU GLN LEU LYS GLN LEU SER LYS ASP LEU SER SEQRES 10 A 484 ASP GLN VAL ALA GLY LEU ALA LYS GLU ALA GLN GLN LEU SEQRES 11 A 484 GLU GLU GLU ARG ASP LYS LEU MET LEU ASN VAL GLY ASN SEQRES 12 A 484 ILE LEU HIS GLU SER VAL PRO ILE ALA GLN ASP GLU GLU SEQRES 13 A 484 THR GLY ASN THR VAL VAL ARG THR PHE GLY ASN THR THR SEQRES 14 A 484 LYS ARG ALA LYS LEU ASN HIS VAL SER ILE MET GLU ARG SEQRES 15 A 484 LEU GLY MET MET ASP THR SER LYS ALA VAL THR SER MET SEQRES 16 A 484 ALA GLY GLY ARG SER TYR VAL LEU LYS GLY GLY LEU VAL SEQRES 17 A 484 GLN LEU GLN VAL ALA LEU VAL SER TYR SER LEU ASP PHE SEQRES 18 A 484 LEU VAL LYS ARG GLY TYR THR PRO PHE TYR PRO PRO PHE SEQRES 19 A 484 PHE LEU ASN ARG ASP VAL MET GLY GLU VAL ALA GLN LEU SEQRES 20 A 484 SER GLN PHE ASP GLU GLU LEU TYR GLN VAL SER GLY ASP SEQRES 21 A 484 GLY ASP LYS LYS TYR LEU ILE ALA THR SER GLU MET PRO SEQRES 22 A 484 ILE ALA ALA TYR HIS ARG GLY ARG TRP PHE THR GLU LEU SEQRES 23 A 484 LYS GLU PRO LEU LYS TYR ALA GLY MET SER THR CYS PHE SEQRES 24 A 484 ARG LYS GLU ALA GLY ALA HIS GLY ARG ASP THR LEU GLY SEQRES 25 A 484 ILE PHE ARG VAL HIS GLN PHE ASP LYS ILE GLU GLN PHE SEQRES 26 A 484 VAL VAL CYS SER PRO ARG GLN GLU GLU SER TRP ARG HIS SEQRES 27 A 484 LEU GLU ASP MET ILE THR THR SER GLU GLU PHE ASN LYS SEQRES 28 A 484 SER LEU GLY LEU PRO TYR ARG VAL VAL ASN ILE CYS SER SEQRES 29 A 484 GLY ALA LEU ASN ASN ALA ALA ALA LYS LYS TYR ASP LEU SEQRES 30 A 484 GLU ALA TRP PHE PRO ALA SER GLY ALA PHE ARG GLU LEU SEQRES 31 A 484 VAL SER CYS SER ASN CYS THR ASP TYR GLN SER GLN SER SEQRES 32 A 484 VAL ASN CYS ARG TYR GLY PRO ASN LEU ARG GLY THR ALA SEQRES 33 A 484 ALA GLN ASN VAL LYS GLU TYR CYS HIS MET LEU ASN GLY SEQRES 34 A 484 THR LEU CYS ALA ILE THR ARG THR MET CYS CYS ILE CYS SEQRES 35 A 484 GLU ASN TYR GLN THR GLU GLU GLY VAL VAL ILE PRO ASP SEQRES 36 A 484 VAL LEU ARG PRO TYR MET MET GLY ILE GLU MET ILE ARG SEQRES 37 A 484 PHE GLU ASN ASN ALA GLN ALA GLU GLY THR THR PRO ASP SEQRES 38 A 484 LYS GLY GLU SEQRES 1 B 484 GLY PRO GLY SER MET MET VAL LEU ASP ILE GLN LEU PHE SEQRES 2 B 484 ARG ASP GLU THR GLY ALA ASN ILE ILE ARG GLU SER GLN SEQRES 3 B 484 ARG ARG ARG PHE ALA ASP PRO ASP ILE VAL ASP ALA ILE SEQRES 4 B 484 ILE GLU ALA ASP LYS LYS TRP ARG ARG THR GLN PHE LEU SEQRES 5 B 484 THR GLU ALA SER LYS LYS LEU ILE ASN ILE CYS SER LYS SEQRES 6 B 484 ALA VAL GLY ALA LYS LYS LYS ALA LYS GLU ALA ASP GLY SEQRES 7 B 484 ASP THR SER GLU ILE PRO PRO GLN VAL LYS GLU ALA TYR SEQRES 8 B 484 GLU ASN GLY THR LEU LYS GLY GLU GLN VAL GLU GLN LEU SEQRES 9 B 484 CYS VAL LEU GLN LEU LYS GLN LEU SER LYS ASP LEU SER SEQRES 10 B 484 ASP GLN VAL ALA GLY LEU ALA LYS GLU ALA GLN GLN LEU SEQRES 11 B 484 GLU GLU GLU ARG ASP LYS LEU MET LEU ASN VAL GLY ASN SEQRES 12 B 484 ILE LEU HIS GLU SER VAL PRO ILE ALA GLN ASP GLU GLU SEQRES 13 B 484 THR GLY ASN THR VAL VAL ARG THR PHE GLY ASN THR THR SEQRES 14 B 484 LYS ARG ALA LYS LEU ASN HIS VAL SER ILE MET GLU ARG SEQRES 15 B 484 LEU GLY MET MET ASP THR SER LYS ALA VAL THR SER MET SEQRES 16 B 484 ALA GLY GLY ARG SER TYR VAL LEU LYS GLY GLY LEU VAL SEQRES 17 B 484 GLN LEU GLN VAL ALA LEU VAL SER TYR SER LEU ASP PHE SEQRES 18 B 484 LEU VAL LYS ARG GLY TYR THR PRO PHE TYR PRO PRO PHE SEQRES 19 B 484 PHE LEU ASN ARG ASP VAL MET GLY GLU VAL ALA GLN LEU SEQRES 20 B 484 SER GLN PHE ASP GLU GLU LEU TYR GLN VAL SER GLY ASP SEQRES 21 B 484 GLY ASP LYS LYS TYR LEU ILE ALA THR SER GLU MET PRO SEQRES 22 B 484 ILE ALA ALA TYR HIS ARG GLY ARG TRP PHE THR GLU LEU SEQRES 23 B 484 LYS GLU PRO LEU LYS TYR ALA GLY MET SER THR CYS PHE SEQRES 24 B 484 ARG LYS GLU ALA GLY ALA HIS GLY ARG ASP THR LEU GLY SEQRES 25 B 484 ILE PHE ARG VAL HIS GLN PHE ASP LYS ILE GLU GLN PHE SEQRES 26 B 484 VAL VAL CYS SER PRO ARG GLN GLU GLU SER TRP ARG HIS SEQRES 27 B 484 LEU GLU ASP MET ILE THR THR SER GLU GLU PHE ASN LYS SEQRES 28 B 484 SER LEU GLY LEU PRO TYR ARG VAL VAL ASN ILE CYS SER SEQRES 29 B 484 GLY ALA LEU ASN ASN ALA ALA ALA LYS LYS TYR ASP LEU SEQRES 30 B 484 GLU ALA TRP PHE PRO ALA SER GLY ALA PHE ARG GLU LEU SEQRES 31 B 484 VAL SER CYS SER ASN CYS THR ASP TYR GLN SER GLN SER SEQRES 32 B 484 VAL ASN CYS ARG TYR GLY PRO ASN LEU ARG GLY THR ALA SEQRES 33 B 484 ALA GLN ASN VAL LYS GLU TYR CYS HIS MET LEU ASN GLY SEQRES 34 B 484 THR LEU CYS ALA ILE THR ARG THR MET CYS CYS ILE CYS SEQRES 35 B 484 GLU ASN TYR GLN THR GLU GLU GLY VAL VAL ILE PRO ASP SEQRES 36 B 484 VAL LEU ARG PRO TYR MET MET GLY ILE GLU MET ILE ARG SEQRES 37 B 484 PHE GLU ASN ASN ALA GLN ALA GLU GLY THR THR PRO ASP SEQRES 38 B 484 LYS GLY GLU HET ATP A 501 31 HET MLI A 601 7 HET MLI A 602 7 HET NA A 600 1 HET ATP B 501 31 HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM MLI MALONATE ION HETNAM NA SODIUM ION FORMUL 3 ATP 2(C10 H16 N5 O13 P3) FORMUL 4 MLI 2(C3 H2 O4 2-) FORMUL 6 NA NA 1+ FORMUL 8 HOH *341(H2 O) HELIX 1 1 ASP A 4 ARG A 9 5 6 HELIX 2 2 ASP A 10 ARG A 24 1 15 HELIX 3 3 ASP A 29 ALA A 68 1 40 HELIX 4 4 CYS A 100 LEU A 134 1 35 HELIX 5 5 ASP A 149 ASN A 154 1 6 HELIX 6 6 ASN A 170 LEU A 178 1 9 HELIX 7 7 SER A 184 GLY A 192 1 9 HELIX 8 8 GLY A 200 LYS A 219 1 20 HELIX 9 9 ARG A 233 ALA A 240 1 8 HELIX 10 10 GLN A 241 GLU A 248 1 8 HELIX 11 11 SER A 265 HIS A 273 1 9 HELIX 12 12 GLU A 328 GLY A 349 1 22 HELIX 13 13 ASP A 393 ASN A 400 1 8 HELIX 14 14 ILE A 429 GLN A 441 1 13 HELIX 15 15 PRO A 449 MET A 456 5 8 HELIX 16 16 ILE B 5 ARG B 9 5 5 HELIX 17 17 ASP B 10 ARG B 24 1 15 HELIX 18 18 ASP B 29 ALA B 68 1 40 HELIX 19 19 PRO B 79 ASN B 88 1 10 HELIX 20 20 LYS B 92 GLU B 97 1 6 HELIX 21 21 CYS B 100 LEU B 134 1 35 HELIX 22 22 ASP B 149 ASN B 154 1 6 HELIX 23 23 ASN B 170 LEU B 178 1 9 HELIX 24 24 SER B 184 GLY B 192 1 9 HELIX 25 25 GLY B 200 LYS B 219 1 20 HELIX 26 26 ARG B 233 ALA B 240 1 8 HELIX 27 27 GLN B 241 GLU B 248 1 8 HELIX 28 28 SER B 265 HIS B 273 1 9 HELIX 29 29 GLU B 328 GLY B 349 1 22 HELIX 30 30 ASP B 393 ASN B 400 1 8 HELIX 31 31 ILE B 429 GLN B 441 1 13 HELIX 32 32 PRO B 449 MET B 457 5 9 SHEET 1 A10 THR A 155 PHE A 160 0 SHEET 2 A10 TYR A 352 ASN A 356 -1 O VAL A 354 N VAL A 157 SHEET 3 A10 LYS A 368 PHE A 376 -1 O ASP A 371 N VAL A 355 SHEET 4 A10 ALA A 381 ASN A 390 -1 O ALA A 381 N PHE A 376 SHEET 5 A10 HIS A 420 ALA A 428 -1 O ASN A 423 N SER A 389 SHEET 6 A10 GLN A 313 CYS A 323 -1 N GLN A 319 O GLY A 424 SHEET 7 A10 LEU A 285 PHE A 294 -1 N TYR A 287 O PHE A 320 SHEET 8 A10 THR A 223 TYR A 226 1 N THR A 223 O LYS A 286 SHEET 9 A10 VAL B 197 LYS B 199 -1 O LEU B 198 N TYR A 226 SHEET 10 A10 MET B 181 ASP B 182 -1 N ASP B 182 O VAL B 197 SHEET 1 B10 MET A 181 ASP A 182 0 SHEET 2 B10 VAL A 197 LYS A 199 -1 O VAL A 197 N ASP A 182 SHEET 3 B10 THR B 223 TYR B 226 -1 O TYR B 226 N LEU A 198 SHEET 4 B10 LEU B 285 PHE B 294 1 O LYS B 286 N THR B 223 SHEET 5 B10 GLN B 313 CYS B 323 -1 O PHE B 320 N TYR B 287 SHEET 6 B10 HIS B 420 ALA B 428 -1 O GLY B 424 N GLN B 319 SHEET 7 B10 ALA B 381 ASN B 390 -1 N SER B 389 O ASN B 423 SHEET 8 B10 LYS B 368 PHE B 376 -1 N TYR B 370 O CYS B 388 SHEET 9 B10 TYR B 352 ASN B 356 -1 N VAL B 355 O ASP B 371 SHEET 10 B10 THR B 155 PHE B 160 -1 N VAL B 157 O VAL B 354 SHEET 1 C 6 PHE A 230 ASN A 232 0 SHEET 2 C 6 LYS A 259 LEU A 261 -1 O TYR A 260 N LEU A 231 SHEET 3 C 6 GLN A 251 SER A 253 -1 N VAL A 252 O LYS A 259 SHEET 4 C 6 GLN B 251 SER B 253 -1 O SER B 253 N GLN A 251 SHEET 5 C 6 LYS B 259 LEU B 261 -1 O LYS B 259 N VAL B 252 SHEET 6 C 6 PHE B 230 ASN B 232 -1 N LEU B 231 O TYR B 260 SHEET 1 D 3 TRP A 277 PHE A 278 0 SHEET 2 D 3 ARG A 402 TYR A 403 1 O ARG A 402 N PHE A 278 SHEET 3 D 3 GLU A 417 TYR A 418 -1 O GLU A 417 N TYR A 403 SHEET 1 E 2 GLY A 445 VAL A 447 0 SHEET 2 E 2 MET A 461 ARG A 463 -1 O ILE A 462 N VAL A 446 SHEET 1 F 3 TRP B 277 PHE B 278 0 SHEET 2 F 3 ARG B 402 TYR B 403 1 O ARG B 402 N PHE B 278 SHEET 3 F 3 GLU B 417 TYR B 418 -1 O GLU B 417 N TYR B 403 SHEET 1 G 2 GLY B 445 VAL B 447 0 SHEET 2 G 2 MET B 461 ARG B 463 -1 O ILE B 462 N VAL B 446 LINK OD1 ASN A 162 NA NA A 600 1555 1555 2.43 LINK OG1 THR A 164 NA NA A 600 1555 1555 2.27 LINK NA NA A 600 O HOH A 895 1555 1555 2.41 LINK NA NA A 600 O HOH A 917 1555 1555 2.31 LINK NA NA A 600 O HOH A 963 1555 1555 2.31 LINK NA NA A 600 O HOH A 964 1555 1555 2.57 SITE 1 AC1 18 ARG A 295 GLU A 297 PHE A 309 ARG A 310 SITE 2 AC1 18 VAL A 311 PHE A 314 LYS A 369 GLU A 384 SITE 3 AC1 18 LEU A 385 VAL A 386 SER A 387 THR A 425 SITE 4 AC1 18 ALA A 428 ARG A 431 HOH A 808 HOH A 906 SITE 5 AC1 18 HOH A 956 HOH A 957 SITE 1 AC2 4 MET A 290 ASP A 315 VAL B 210 MET B 290 SITE 1 AC3 5 ARG A 276 TRP A 277 PHE A 278 HOH A 887 SITE 2 AC3 5 ARG B 166 SITE 1 AC4 6 ASN A 162 THR A 164 HOH A 895 HOH A 917 SITE 2 AC4 6 HOH A 963 HOH A 964 SITE 1 AC5 18 ARG B 295 GLU B 297 PHE B 309 ARG B 310 SITE 2 AC5 18 VAL B 311 PHE B 314 LYS B 369 GLU B 384 SITE 3 AC5 18 LEU B 385 VAL B 386 SER B 387 THR B 425 SITE 4 AC5 18 ALA B 428 ARG B 431 HOH B 814 HOH B 931 SITE 5 AC5 18 HOH B 958 HOH B 963 CRYST1 175.652 175.652 248.518 90.00 90.00 120.00 H 3 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005693 0.003287 0.000000 0.00000 SCALE2 0.000000 0.006574 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004024 0.00000