data_3LVQ # _entry.id 3LVQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3LVQ pdb_00003lvq 10.2210/pdb3lvq/pdb RCSB RCSB057789 ? ? WWPDB D_1000057789 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-06-09 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-08-09 4 'Structure model' 1 3 2017-11-08 5 'Structure model' 1 4 2018-12-05 6 'Structure model' 1 5 2023-11-01 7 'Structure model' 1 6 2024-10-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 3 'Structure model' 'Source and taxonomy' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' Advisory 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Structure summary' 8 6 'Structure model' 'Data collection' 9 6 'Structure model' 'Database references' 10 6 'Structure model' 'Derived calculations' 11 6 'Structure model' 'Refinement description' 12 7 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' entity_src_gen 2 3 'Structure model' software 3 4 'Structure model' software 4 5 'Structure model' pdbx_poly_seq_scheme 5 5 'Structure model' pdbx_unobs_or_zero_occ_residues 6 6 'Structure model' chem_comp_atom 7 6 'Structure model' chem_comp_bond 8 6 'Structure model' database_2 9 6 'Structure model' pdbx_initial_refinement_model 10 6 'Structure model' pdbx_struct_conn_angle 11 6 'Structure model' struct_conn 12 6 'Structure model' struct_ref_seq_dif 13 6 'Structure model' struct_site 14 7 'Structure model' pdbx_entry_details 15 7 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.name' 2 5 'Structure model' '_pdbx_poly_seq_scheme.pdb_seq_num' 3 5 'Structure model' '_pdbx_unobs_or_zero_occ_residues.auth_seq_id' 4 6 'Structure model' '_database_2.pdbx_DOI' 5 6 'Structure model' '_database_2.pdbx_database_accession' 6 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 7 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 8 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 9 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 10 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 11 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 12 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 13 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 14 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 15 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 16 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 17 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 18 6 'Structure model' '_pdbx_struct_conn_angle.value' 19 6 'Structure model' '_struct_conn.pdbx_dist_value' 20 6 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 21 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 22 6 'Structure model' '_struct_conn.ptnr1_label_asym_id' 23 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 24 6 'Structure model' '_struct_conn.ptnr1_label_comp_id' 25 6 'Structure model' '_struct_conn.ptnr1_label_seq_id' 26 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 27 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 28 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' 29 6 'Structure model' '_struct_conn.ptnr2_label_atom_id' 30 6 'Structure model' '_struct_conn.ptnr2_label_comp_id' 31 6 'Structure model' '_struct_ref_seq_dif.details' 32 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 33 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 34 6 'Structure model' '_struct_site.pdbx_auth_seq_id' 35 7 'Structure model' '_pdbx_entry_details.has_protein_modification' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3LVQ _pdbx_database_status.recvd_initial_deposition_date 2010-02-22 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3LVR _pdbx_database_related.details 'same protein complex in transition state soaked with Calcium' _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ismail, S.A.' 1 'Vetter, I.R.' 2 'Sot, B.' 3 'Wittinghofer, A.' 4 # _citation.id primary _citation.title 'The structure of an Arf-ArfGAP complex reveals a Ca2+ regulatory mechanism' _citation.journal_abbrev 'Cell(Cambridge,Mass.)' _citation.journal_volume 141 _citation.page_first 812 _citation.page_last 821 _citation.year 2010 _citation.journal_id_ASTM CELLB5 _citation.country US _citation.journal_id_ISSN 0092-8674 _citation.journal_id_CSD 0998 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20510928 _citation.pdbx_database_id_DOI 10.1016/j.cell.2010.03.051 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ismail, S.A.' 1 ? primary 'Vetter, I.R.' 2 ? primary 'Sot, B.' 3 ? primary 'Wittinghofer, A.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3, ADP-ribosylation factor 6' 54825.930 1 ? ? 'GAP and Ankyrin domain, residues 416-697, residues 11-175' 'Missing the N-terminus amphipathic helix for Arf6' 2 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 4 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 1 ? ? ? ? 5 non-polymer syn 'ALUMINUM FLUORIDE' 83.977 1 ? ? ? ? 6 water nat water 18.015 5 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'ASAP3, Development and differentiation-enhancing factor-like 1, Protein up-regulated in liver cancer 1, Arf6, UPLC1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GHDGEPHDLTKLLIAEVKSRPGNSQCCDCGAADPTWLSTNLGVLTCIQCSGVHRELGVRFSRMQSLTLDLLGPSELLLAL NMGNTSFNEVMEAQLPSHGGPKPSAESDMGTRRDYIMAKYVEHRFARRCTPEPQRLWTAICNRDLLSVLEAFANGQDFGQ PLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAG ETALDIARKKHHKECEELLEQAQAGTFAFPLHVDYSWVISTENLSSDSSLSSPSALNSLSSPSALNSTASNSPGIEGLSN KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCA DRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTS NYKSKLAAALEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;GHDGEPHDLTKLLIAEVKSRPGNSQCCDCGAADPTWLSTNLGVLTCIQCSGVHRELGVRFSRMQSLTLDLLGPSELLLAL NMGNTSFNEVMEAQLPSHGGPKPSAESDMGTRRDYIMAKYVEHRFARRCTPEPQRLWTAICNRDLLSVLEAFANGQDFGQ PLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAG ETALDIARKKHHKECEELLEQAQAGTFAFPLHVDYSWVISTENLSSDSSLSSPSALNSLSSPSALNSTASNSPGIEGLSN KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCA DRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTS NYKSKLAAALEHHHHHH ; _entity_poly.pdbx_strand_id E _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 'MAGNESIUM ION' MG 4 "GUANOSINE-5'-DIPHOSPHATE" GDP 5 'ALUMINUM FLUORIDE' AF3 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 HIS n 1 3 ASP n 1 4 GLY n 1 5 GLU n 1 6 PRO n 1 7 HIS n 1 8 ASP n 1 9 LEU n 1 10 THR n 1 11 LYS n 1 12 LEU n 1 13 LEU n 1 14 ILE n 1 15 ALA n 1 16 GLU n 1 17 VAL n 1 18 LYS n 1 19 SER n 1 20 ARG n 1 21 PRO n 1 22 GLY n 1 23 ASN n 1 24 SER n 1 25 GLN n 1 26 CYS n 1 27 CYS n 1 28 ASP n 1 29 CYS n 1 30 GLY n 1 31 ALA n 1 32 ALA n 1 33 ASP n 1 34 PRO n 1 35 THR n 1 36 TRP n 1 37 LEU n 1 38 SER n 1 39 THR n 1 40 ASN n 1 41 LEU n 1 42 GLY n 1 43 VAL n 1 44 LEU n 1 45 THR n 1 46 CYS n 1 47 ILE n 1 48 GLN n 1 49 CYS n 1 50 SER n 1 51 GLY n 1 52 VAL n 1 53 HIS n 1 54 ARG n 1 55 GLU n 1 56 LEU n 1 57 GLY n 1 58 VAL n 1 59 ARG n 1 60 PHE n 1 61 SER n 1 62 ARG n 1 63 MET n 1 64 GLN n 1 65 SER n 1 66 LEU n 1 67 THR n 1 68 LEU n 1 69 ASP n 1 70 LEU n 1 71 LEU n 1 72 GLY n 1 73 PRO n 1 74 SER n 1 75 GLU n 1 76 LEU n 1 77 LEU n 1 78 LEU n 1 79 ALA n 1 80 LEU n 1 81 ASN n 1 82 MET n 1 83 GLY n 1 84 ASN n 1 85 THR n 1 86 SER n 1 87 PHE n 1 88 ASN n 1 89 GLU n 1 90 VAL n 1 91 MET n 1 92 GLU n 1 93 ALA n 1 94 GLN n 1 95 LEU n 1 96 PRO n 1 97 SER n 1 98 HIS n 1 99 GLY n 1 100 GLY n 1 101 PRO n 1 102 LYS n 1 103 PRO n 1 104 SER n 1 105 ALA n 1 106 GLU n 1 107 SER n 1 108 ASP n 1 109 MET n 1 110 GLY n 1 111 THR n 1 112 ARG n 1 113 ARG n 1 114 ASP n 1 115 TYR n 1 116 ILE n 1 117 MET n 1 118 ALA n 1 119 LYS n 1 120 TYR n 1 121 VAL n 1 122 GLU n 1 123 HIS n 1 124 ARG n 1 125 PHE n 1 126 ALA n 1 127 ARG n 1 128 ARG n 1 129 CYS n 1 130 THR n 1 131 PRO n 1 132 GLU n 1 133 PRO n 1 134 GLN n 1 135 ARG n 1 136 LEU n 1 137 TRP n 1 138 THR n 1 139 ALA n 1 140 ILE n 1 141 CYS n 1 142 ASN n 1 143 ARG n 1 144 ASP n 1 145 LEU n 1 146 LEU n 1 147 SER n 1 148 VAL n 1 149 LEU n 1 150 GLU n 1 151 ALA n 1 152 PHE n 1 153 ALA n 1 154 ASN n 1 155 GLY n 1 156 GLN n 1 157 ASP n 1 158 PHE n 1 159 GLY n 1 160 GLN n 1 161 PRO n 1 162 LEU n 1 163 PRO n 1 164 GLY n 1 165 PRO n 1 166 ASP n 1 167 ALA n 1 168 GLN n 1 169 ALA n 1 170 PRO n 1 171 GLU n 1 172 GLU n 1 173 LEU n 1 174 VAL n 1 175 LEU n 1 176 HIS n 1 177 LEU n 1 178 ALA n 1 179 VAL n 1 180 LYS n 1 181 VAL n 1 182 ALA n 1 183 ASN n 1 184 GLN n 1 185 ALA n 1 186 SER n 1 187 LEU n 1 188 PRO n 1 189 LEU n 1 190 VAL n 1 191 ASP n 1 192 PHE n 1 193 ILE n 1 194 ILE n 1 195 GLN n 1 196 ASN n 1 197 GLY n 1 198 GLY n 1 199 HIS n 1 200 LEU n 1 201 ASP n 1 202 ALA n 1 203 LYS n 1 204 ALA n 1 205 ALA n 1 206 ASP n 1 207 GLY n 1 208 ASN n 1 209 THR n 1 210 ALA n 1 211 LEU n 1 212 HIS n 1 213 TYR n 1 214 ALA n 1 215 ALA n 1 216 LEU n 1 217 TYR n 1 218 ASN n 1 219 GLN n 1 220 PRO n 1 221 ASP n 1 222 CYS n 1 223 LEU n 1 224 LYS n 1 225 LEU n 1 226 LEU n 1 227 LEU n 1 228 LYS n 1 229 GLY n 1 230 ARG n 1 231 ALA n 1 232 LEU n 1 233 VAL n 1 234 GLY n 1 235 THR n 1 236 VAL n 1 237 ASN n 1 238 GLU n 1 239 ALA n 1 240 GLY n 1 241 GLU n 1 242 THR n 1 243 ALA n 1 244 LEU n 1 245 ASP n 1 246 ILE n 1 247 ALA n 1 248 ARG n 1 249 LYS n 1 250 LYS n 1 251 HIS n 1 252 HIS n 1 253 LYS n 1 254 GLU n 1 255 CYS n 1 256 GLU n 1 257 GLU n 1 258 LEU n 1 259 LEU n 1 260 GLU n 1 261 GLN n 1 262 ALA n 1 263 GLN n 1 264 ALA n 1 265 GLY n 1 266 THR n 1 267 PHE n 1 268 ALA n 1 269 PHE n 1 270 PRO n 1 271 LEU n 1 272 HIS n 1 273 VAL n 1 274 ASP n 1 275 TYR n 1 276 SER n 1 277 TRP n 1 278 VAL n 1 279 ILE n 1 280 SER n 1 281 THR n 1 282 GLU n 1 283 ASN n 1 284 LEU n 1 285 SER n 1 286 SER n 1 287 ASP n 1 288 SER n 1 289 SER n 1 290 LEU n 1 291 SER n 1 292 SER n 1 293 PRO n 1 294 SER n 1 295 ALA n 1 296 LEU n 1 297 ASN n 1 298 SER n 1 299 LEU n 1 300 SER n 1 301 SER n 1 302 PRO n 1 303 SER n 1 304 ALA n 1 305 LEU n 1 306 ASN n 1 307 SER n 1 308 THR n 1 309 ALA n 1 310 SER n 1 311 ASN n 1 312 SER n 1 313 PRO n 1 314 GLY n 1 315 ILE n 1 316 GLU n 1 317 GLY n 1 318 LEU n 1 319 SER n 1 320 ASN n 1 321 LYS n 1 322 GLU n 1 323 MET n 1 324 ARG n 1 325 ILE n 1 326 LEU n 1 327 MET n 1 328 LEU n 1 329 GLY n 1 330 LEU n 1 331 ASP n 1 332 ALA n 1 333 ALA n 1 334 GLY n 1 335 LYS n 1 336 THR n 1 337 THR n 1 338 ILE n 1 339 LEU n 1 340 TYR n 1 341 LYS n 1 342 LEU n 1 343 LYS n 1 344 LEU n 1 345 GLY n 1 346 GLN n 1 347 SER n 1 348 VAL n 1 349 THR n 1 350 THR n 1 351 ILE n 1 352 PRO n 1 353 THR n 1 354 VAL n 1 355 GLY n 1 356 PHE n 1 357 ASN n 1 358 VAL n 1 359 GLU n 1 360 THR n 1 361 VAL n 1 362 THR n 1 363 TYR n 1 364 LYS n 1 365 ASN n 1 366 VAL n 1 367 LYS n 1 368 PHE n 1 369 ASN n 1 370 VAL n 1 371 TRP n 1 372 ASP n 1 373 VAL n 1 374 GLY n 1 375 GLY n 1 376 GLN n 1 377 ASP n 1 378 LYS n 1 379 ILE n 1 380 ARG n 1 381 PRO n 1 382 LEU n 1 383 TRP n 1 384 ARG n 1 385 HIS n 1 386 TYR n 1 387 TYR n 1 388 THR n 1 389 GLY n 1 390 THR n 1 391 GLN n 1 392 GLY n 1 393 LEU n 1 394 ILE n 1 395 PHE n 1 396 VAL n 1 397 VAL n 1 398 ASP n 1 399 CYS n 1 400 ALA n 1 401 ASP n 1 402 ARG n 1 403 ASP n 1 404 ARG n 1 405 ILE n 1 406 ASP n 1 407 GLU n 1 408 ALA n 1 409 ARG n 1 410 GLN n 1 411 GLU n 1 412 LEU n 1 413 HIS n 1 414 ARG n 1 415 ILE n 1 416 ILE n 1 417 ASN n 1 418 ASP n 1 419 ARG n 1 420 GLU n 1 421 MET n 1 422 ARG n 1 423 ASP n 1 424 ALA n 1 425 ILE n 1 426 ILE n 1 427 LEU n 1 428 ILE n 1 429 PHE n 1 430 ALA n 1 431 ASN n 1 432 LYS n 1 433 GLN n 1 434 ASP n 1 435 LEU n 1 436 PRO n 1 437 ASP n 1 438 ALA n 1 439 MET n 1 440 LYS n 1 441 PRO n 1 442 HIS n 1 443 GLU n 1 444 ILE n 1 445 GLN n 1 446 GLU n 1 447 LYS n 1 448 LEU n 1 449 GLY n 1 450 LEU n 1 451 THR n 1 452 ARG n 1 453 ILE n 1 454 ARG n 1 455 ASP n 1 456 ARG n 1 457 ASN n 1 458 TRP n 1 459 TYR n 1 460 VAL n 1 461 GLN n 1 462 PRO n 1 463 SER n 1 464 CYS n 1 465 ALA n 1 466 THR n 1 467 SER n 1 468 GLY n 1 469 ASP n 1 470 GLY n 1 471 LEU n 1 472 TYR n 1 473 GLU n 1 474 GLY n 1 475 LEU n 1 476 THR n 1 477 TRP n 1 478 LEU n 1 479 THR n 1 480 SER n 1 481 ASN n 1 482 TYR n 1 483 LYS n 1 484 SER n 1 485 LYS n 1 486 LEU n 1 487 ALA n 1 488 ALA n 1 489 ALA n 1 490 LEU n 1 491 GLU n 1 492 HIS n 1 493 HIS n 1 494 HIS n 1 495 HIS n 1 496 HIS n 1 497 HIS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? 1 282 human ? 'ASAP3, ARF6' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1 3 sample ? 320 484 human ? 'ASAP3, ARF6' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1 2 sample ? 283 319 ? ? ? ? ? ? ? ? ? 'synthetic construct' 32630 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight AF3 non-polymer . 'ALUMINUM FLUORIDE' ? 'Al F3' 83.977 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 416 ? ? ? E . n A 1 2 HIS 2 417 ? ? ? E . n A 1 3 ASP 3 418 ? ? ? E . n A 1 4 GLY 4 419 ? ? ? E . n A 1 5 GLU 5 420 ? ? ? E . n A 1 6 PRO 6 421 ? ? ? E . n A 1 7 HIS 7 422 ? ? ? E . n A 1 8 ASP 8 423 423 ASP ASP E . n A 1 9 LEU 9 424 424 LEU LEU E . n A 1 10 THR 10 425 425 THR THR E . n A 1 11 LYS 11 426 426 LYS LYS E . n A 1 12 LEU 12 427 427 LEU LEU E . n A 1 13 LEU 13 428 428 LEU LEU E . n A 1 14 ILE 14 429 429 ILE ILE E . n A 1 15 ALA 15 430 430 ALA ALA E . n A 1 16 GLU 16 431 431 GLU GLU E . n A 1 17 VAL 17 432 432 VAL VAL E . n A 1 18 LYS 18 433 433 LYS LYS E . n A 1 19 SER 19 434 434 SER SER E . n A 1 20 ARG 20 435 435 ARG ARG E . n A 1 21 PRO 21 436 436 PRO PRO E . n A 1 22 GLY 22 437 437 GLY GLY E . n A 1 23 ASN 23 438 438 ASN ASN E . n A 1 24 SER 24 439 439 SER SER E . n A 1 25 GLN 25 440 440 GLN GLN E . n A 1 26 CYS 26 441 441 CYS CYS E . n A 1 27 CYS 27 442 442 CYS CYS E . n A 1 28 ASP 28 443 443 ASP ASP E . n A 1 29 CYS 29 444 444 CYS CYS E . n A 1 30 GLY 30 445 445 GLY GLY E . n A 1 31 ALA 31 446 446 ALA ALA E . n A 1 32 ALA 32 447 447 ALA ALA E . n A 1 33 ASP 33 448 448 ASP ASP E . n A 1 34 PRO 34 449 449 PRO PRO E . n A 1 35 THR 35 450 450 THR THR E . n A 1 36 TRP 36 451 451 TRP TRP E . n A 1 37 LEU 37 452 452 LEU LEU E . n A 1 38 SER 38 453 453 SER SER E . n A 1 39 THR 39 454 454 THR THR E . n A 1 40 ASN 40 455 455 ASN ASN E . n A 1 41 LEU 41 456 456 LEU LEU E . n A 1 42 GLY 42 457 457 GLY GLY E . n A 1 43 VAL 43 458 458 VAL VAL E . n A 1 44 LEU 44 459 459 LEU LEU E . n A 1 45 THR 45 460 460 THR THR E . n A 1 46 CYS 46 461 461 CYS CYS E . n A 1 47 ILE 47 462 462 ILE ILE E . n A 1 48 GLN 48 463 463 GLN GLN E . n A 1 49 CYS 49 464 464 CYS CYS E . n A 1 50 SER 50 465 465 SER SER E . n A 1 51 GLY 51 466 466 GLY GLY E . n A 1 52 VAL 52 467 467 VAL VAL E . n A 1 53 HIS 53 468 468 HIS HIS E . n A 1 54 ARG 54 469 469 ARG ARG E . n A 1 55 GLU 55 470 470 GLU GLU E . n A 1 56 LEU 56 471 471 LEU LEU E . n A 1 57 GLY 57 472 472 GLY GLY E . n A 1 58 VAL 58 473 473 VAL VAL E . n A 1 59 ARG 59 474 474 ARG ARG E . n A 1 60 PHE 60 475 475 PHE PHE E . n A 1 61 SER 61 476 476 SER SER E . n A 1 62 ARG 62 477 477 ARG ARG E . n A 1 63 MET 63 478 478 MET MET E . n A 1 64 GLN 64 479 479 GLN GLN E . n A 1 65 SER 65 480 480 SER SER E . n A 1 66 LEU 66 481 481 LEU LEU E . n A 1 67 THR 67 482 482 THR THR E . n A 1 68 LEU 68 483 483 LEU LEU E . n A 1 69 ASP 69 484 484 ASP ASP E . n A 1 70 LEU 70 485 485 LEU LEU E . n A 1 71 LEU 71 486 486 LEU LEU E . n A 1 72 GLY 72 487 487 GLY GLY E . n A 1 73 PRO 73 488 488 PRO PRO E . n A 1 74 SER 74 489 489 SER SER E . n A 1 75 GLU 75 490 490 GLU GLU E . n A 1 76 LEU 76 491 491 LEU LEU E . n A 1 77 LEU 77 492 492 LEU LEU E . n A 1 78 LEU 78 493 493 LEU LEU E . n A 1 79 ALA 79 494 494 ALA ALA E . n A 1 80 LEU 80 495 495 LEU LEU E . n A 1 81 ASN 81 496 496 ASN ASN E . n A 1 82 MET 82 497 497 MET MET E . n A 1 83 GLY 83 498 498 GLY GLY E . n A 1 84 ASN 84 499 499 ASN ASN E . n A 1 85 THR 85 500 500 THR THR E . n A 1 86 SER 86 501 501 SER SER E . n A 1 87 PHE 87 502 502 PHE PHE E . n A 1 88 ASN 88 503 503 ASN ASN E . n A 1 89 GLU 89 504 504 GLU GLU E . n A 1 90 VAL 90 505 505 VAL VAL E . n A 1 91 MET 91 506 506 MET MET E . n A 1 92 GLU 92 507 507 GLU GLU E . n A 1 93 ALA 93 508 508 ALA ALA E . n A 1 94 GLN 94 509 509 GLN GLN E . n A 1 95 LEU 95 510 510 LEU LEU E . n A 1 96 PRO 96 511 511 PRO PRO E . n A 1 97 SER 97 512 512 SER SER E . n A 1 98 HIS 98 513 513 HIS HIS E . n A 1 99 GLY 99 514 514 GLY GLY E . n A 1 100 GLY 100 515 515 GLY GLY E . n A 1 101 PRO 101 516 516 PRO PRO E . n A 1 102 LYS 102 517 517 LYS LYS E . n A 1 103 PRO 103 518 518 PRO PRO E . n A 1 104 SER 104 519 519 SER SER E . n A 1 105 ALA 105 520 520 ALA ALA E . n A 1 106 GLU 106 521 521 GLU GLU E . n A 1 107 SER 107 522 522 SER SER E . n A 1 108 ASP 108 523 523 ASP ASP E . n A 1 109 MET 109 524 524 MET MET E . n A 1 110 GLY 110 525 525 GLY GLY E . n A 1 111 THR 111 526 526 THR THR E . n A 1 112 ARG 112 527 527 ARG ARG E . n A 1 113 ARG 113 528 528 ARG ARG E . n A 1 114 ASP 114 529 529 ASP ASP E . n A 1 115 TYR 115 530 530 TYR TYR E . n A 1 116 ILE 116 531 531 ILE ILE E . n A 1 117 MET 117 532 532 MET MET E . n A 1 118 ALA 118 533 533 ALA ALA E . n A 1 119 LYS 119 534 534 LYS LYS E . n A 1 120 TYR 120 535 535 TYR TYR E . n A 1 121 VAL 121 536 536 VAL VAL E . n A 1 122 GLU 122 537 537 GLU GLU E . n A 1 123 HIS 123 538 538 HIS HIS E . n A 1 124 ARG 124 539 539 ARG ARG E . n A 1 125 PHE 125 540 540 PHE PHE E . n A 1 126 ALA 126 541 541 ALA ALA E . n A 1 127 ARG 127 542 542 ARG ARG E . n A 1 128 ARG 128 543 543 ARG ARG E . n A 1 129 CYS 129 544 544 CYS CYS E . n A 1 130 THR 130 545 545 THR THR E . n A 1 131 PRO 131 546 ? ? ? E . n A 1 132 GLU 132 547 547 GLU GLU E . n A 1 133 PRO 133 548 548 PRO PRO E . n A 1 134 GLN 134 549 549 GLN GLN E . n A 1 135 ARG 135 550 550 ARG ARG E . n A 1 136 LEU 136 551 551 LEU LEU E . n A 1 137 TRP 137 552 552 TRP TRP E . n A 1 138 THR 138 553 553 THR THR E . n A 1 139 ALA 139 554 554 ALA ALA E . n A 1 140 ILE 140 555 555 ILE ILE E . n A 1 141 CYS 141 556 556 CYS CYS E . n A 1 142 ASN 142 557 557 ASN ASN E . n A 1 143 ARG 143 558 558 ARG ARG E . n A 1 144 ASP 144 559 559 ASP ASP E . n A 1 145 LEU 145 560 560 LEU LEU E . n A 1 146 LEU 146 561 561 LEU LEU E . n A 1 147 SER 147 562 562 SER SER E . n A 1 148 VAL 148 563 563 VAL VAL E . n A 1 149 LEU 149 564 564 LEU LEU E . n A 1 150 GLU 150 565 565 GLU GLU E . n A 1 151 ALA 151 566 566 ALA ALA E . n A 1 152 PHE 152 567 567 PHE PHE E . n A 1 153 ALA 153 568 568 ALA ALA E . n A 1 154 ASN 154 569 569 ASN ASN E . n A 1 155 GLY 155 570 570 GLY GLY E . n A 1 156 GLN 156 571 571 GLN GLN E . n A 1 157 ASP 157 572 572 ASP ASP E . n A 1 158 PHE 158 573 573 PHE PHE E . n A 1 159 GLY 159 574 574 GLY GLY E . n A 1 160 GLN 160 575 575 GLN GLN E . n A 1 161 PRO 161 576 576 PRO PRO E . n A 1 162 LEU 162 577 577 LEU LEU E . n A 1 163 PRO 163 578 578 PRO PRO E . n A 1 164 GLY 164 579 579 GLY GLY E . n A 1 165 PRO 165 580 580 PRO PRO E . n A 1 166 ASP 166 581 581 ASP ASP E . n A 1 167 ALA 167 582 582 ALA ALA E . n A 1 168 GLN 168 583 583 GLN GLN E . n A 1 169 ALA 169 584 584 ALA ALA E . n A 1 170 PRO 170 585 585 PRO PRO E . n A 1 171 GLU 171 586 586 GLU GLU E . n A 1 172 GLU 172 587 587 GLU GLU E . n A 1 173 LEU 173 588 588 LEU LEU E . n A 1 174 VAL 174 589 589 VAL VAL E . n A 1 175 LEU 175 590 590 LEU LEU E . n A 1 176 HIS 176 591 591 HIS HIS E . n A 1 177 LEU 177 592 592 LEU LEU E . n A 1 178 ALA 178 593 593 ALA ALA E . n A 1 179 VAL 179 594 594 VAL VAL E . n A 1 180 LYS 180 595 595 LYS LYS E . n A 1 181 VAL 181 596 596 VAL VAL E . n A 1 182 ALA 182 597 597 ALA ALA E . n A 1 183 ASN 183 598 598 ASN ASN E . n A 1 184 GLN 184 599 599 GLN GLN E . n A 1 185 ALA 185 600 600 ALA ALA E . n A 1 186 SER 186 601 601 SER SER E . n A 1 187 LEU 187 602 602 LEU LEU E . n A 1 188 PRO 188 603 603 PRO PRO E . n A 1 189 LEU 189 604 604 LEU LEU E . n A 1 190 VAL 190 605 605 VAL VAL E . n A 1 191 ASP 191 606 606 ASP ALA E . n A 1 192 PHE 192 607 607 PHE PHE E . n A 1 193 ILE 193 608 608 ILE ILE E . n A 1 194 ILE 194 609 609 ILE ILE E . n A 1 195 GLN 195 610 610 GLN GLN E . n A 1 196 ASN 196 611 611 ASN ASN E . n A 1 197 GLY 197 612 612 GLY GLY E . n A 1 198 GLY 198 613 613 GLY GLY E . n A 1 199 HIS 199 614 614 HIS HIS E . n A 1 200 LEU 200 615 615 LEU LEU E . n A 1 201 ASP 201 616 616 ASP ASP E . n A 1 202 ALA 202 617 617 ALA ALA E . n A 1 203 LYS 203 618 618 LYS LYS E . n A 1 204 ALA 204 619 619 ALA ALA E . n A 1 205 ALA 205 620 620 ALA ALA E . n A 1 206 ASP 206 621 621 ASP ASP E . n A 1 207 GLY 207 622 622 GLY GLY E . n A 1 208 ASN 208 623 623 ASN ASN E . n A 1 209 THR 209 624 624 THR THR E . n A 1 210 ALA 210 625 625 ALA ALA E . n A 1 211 LEU 211 626 626 LEU LEU E . n A 1 212 HIS 212 627 627 HIS HIS E . n A 1 213 TYR 213 628 628 TYR TYR E . n A 1 214 ALA 214 629 629 ALA ALA E . n A 1 215 ALA 215 630 630 ALA ALA E . n A 1 216 LEU 216 631 631 LEU LEU E . n A 1 217 TYR 217 632 632 TYR TYR E . n A 1 218 ASN 218 633 633 ASN ASN E . n A 1 219 GLN 219 634 634 GLN GLN E . n A 1 220 PRO 220 635 635 PRO PRO E . n A 1 221 ASP 221 636 636 ASP ASP E . n A 1 222 CYS 222 637 637 CYS CYS E . n A 1 223 LEU 223 638 638 LEU LEU E . n A 1 224 LYS 224 639 639 LYS LYS E . n A 1 225 LEU 225 640 640 LEU LEU E . n A 1 226 LEU 226 641 641 LEU LEU E . n A 1 227 LEU 227 642 642 LEU LEU E . n A 1 228 LYS 228 643 643 LYS LYS E . n A 1 229 GLY 229 644 644 GLY GLY E . n A 1 230 ARG 230 645 645 ARG ARG E . n A 1 231 ALA 231 646 646 ALA ALA E . n A 1 232 LEU 232 647 647 LEU LEU E . n A 1 233 VAL 233 648 648 VAL VAL E . n A 1 234 GLY 234 649 649 GLY GLY E . n A 1 235 THR 235 650 650 THR THR E . n A 1 236 VAL 236 651 651 VAL VAL E . n A 1 237 ASN 237 652 652 ASN ASN E . n A 1 238 GLU 238 653 653 GLU GLU E . n A 1 239 ALA 239 654 654 ALA ALA E . n A 1 240 GLY 240 655 655 GLY GLY E . n A 1 241 GLU 241 656 656 GLU GLU E . n A 1 242 THR 242 657 657 THR THR E . n A 1 243 ALA 243 658 658 ALA ALA E . n A 1 244 LEU 244 659 659 LEU LEU E . n A 1 245 ASP 245 660 660 ASP ASP E . n A 1 246 ILE 246 661 661 ILE ILE E . n A 1 247 ALA 247 662 662 ALA ALA E . n A 1 248 ARG 248 663 663 ARG ARG E . n A 1 249 LYS 249 664 664 LYS LYS E . n A 1 250 LYS 250 665 665 LYS LYS E . n A 1 251 HIS 251 666 666 HIS HIS E . n A 1 252 HIS 252 667 667 HIS HIS E . n A 1 253 LYS 253 668 668 LYS LYS E . n A 1 254 GLU 254 669 669 GLU GLU E . n A 1 255 CYS 255 670 670 CYS CYS E . n A 1 256 GLU 256 671 671 GLU GLU E . n A 1 257 GLU 257 672 672 GLU GLU E . n A 1 258 LEU 258 673 673 LEU LEU E . n A 1 259 LEU 259 674 674 LEU LEU E . n A 1 260 GLU 260 675 675 GLU GLU E . n A 1 261 GLN 261 676 676 GLN GLN E . n A 1 262 ALA 262 677 677 ALA ALA E . n A 1 263 GLN 263 678 678 GLN GLN E . n A 1 264 ALA 264 679 679 ALA ALA E . n A 1 265 GLY 265 680 ? ? ? E . n A 1 266 THR 266 681 ? ? ? E . n A 1 267 PHE 267 682 ? ? ? E . n A 1 268 ALA 268 683 ? ? ? E . n A 1 269 PHE 269 684 ? ? ? E . n A 1 270 PRO 270 685 ? ? ? E . n A 1 271 LEU 271 686 ? ? ? E . n A 1 272 HIS 272 687 ? ? ? E . n A 1 273 VAL 273 688 ? ? ? E . n A 1 274 ASP 274 689 ? ? ? E . n A 1 275 TYR 275 690 ? ? ? E . n A 1 276 SER 276 691 ? ? ? E . n A 1 277 TRP 277 692 ? ? ? E . n A 1 278 VAL 278 693 ? ? ? E . n A 1 279 ILE 279 694 ? ? ? E . n A 1 280 SER 280 695 ? ? ? E . n A 1 281 THR 281 696 ? ? ? E . n A 1 282 GLU 282 697 ? ? ? E . n A 1 283 ASN 283 698 ? ? ? E . n A 1 284 LEU 284 699 ? ? ? E . n A 1 285 SER 285 700 ? ? ? E . n A 1 286 SER 286 701 ? ? ? E . n A 1 287 ASP 287 702 ? ? ? E . n A 1 288 SER 288 703 ? ? ? E . n A 1 289 SER 289 704 ? ? ? E . n A 1 290 LEU 290 705 ? ? ? E . n A 1 291 SER 291 706 ? ? ? E . n A 1 292 SER 292 707 ? ? ? E . n A 1 293 PRO 293 708 ? ? ? E . n A 1 294 SER 294 709 ? ? ? E . n A 1 295 ALA 295 710 ? ? ? E . n A 1 296 LEU 296 711 ? ? ? E . n A 1 297 ASN 297 712 ? ? ? E . n A 1 298 SER 298 713 ? ? ? E . n A 1 299 LEU 299 714 ? ? ? E . n A 1 300 SER 300 715 ? ? ? E . n A 1 301 SER 301 716 ? ? ? E . n A 1 302 PRO 302 717 ? ? ? E . n A 1 303 SER 303 718 ? ? ? E . n A 1 304 ALA 304 719 ? ? ? E . n A 1 305 LEU 305 720 ? ? ? E . n A 1 306 ASN 306 721 ? ? ? E . n A 1 307 SER 307 722 ? ? ? E . n A 1 308 THR 308 723 ? ? ? E . n A 1 309 ALA 309 724 ? ? ? E . n A 1 310 SER 310 725 ? ? ? E . n A 1 311 ASN 311 726 ? ? ? E . n A 1 312 SER 312 727 ? ? ? E . n A 1 313 PRO 313 728 ? ? ? E . n A 1 314 GLY 314 729 ? ? ? E . n A 1 315 ILE 315 730 ? ? ? E . n A 1 316 GLU 316 731 ? ? ? E . n A 1 317 GLY 317 732 ? ? ? E . n A 1 318 LEU 318 733 ? ? ? E . n A 1 319 SER 319 734 ? ? ? E . n A 1 320 ASN 320 11 11 ASN ALA E . n A 1 321 LYS 321 12 12 LYS ALA E . n A 1 322 GLU 322 13 13 GLU ALA E . n A 1 323 MET 323 14 14 MET MET E . n A 1 324 ARG 324 15 15 ARG ARG E . n A 1 325 ILE 325 16 16 ILE ILE E . n A 1 326 LEU 326 17 17 LEU LEU E . n A 1 327 MET 327 18 18 MET MET E . n A 1 328 LEU 328 19 19 LEU LEU E . n A 1 329 GLY 329 20 20 GLY GLY E . n A 1 330 LEU 330 21 21 LEU LEU E . n A 1 331 ASP 331 22 22 ASP ASP E . n A 1 332 ALA 332 23 23 ALA ALA E . n A 1 333 ALA 333 24 24 ALA ALA E . n A 1 334 GLY 334 25 25 GLY GLY E . n A 1 335 LYS 335 26 26 LYS LYS E . n A 1 336 THR 336 27 27 THR THR E . n A 1 337 THR 337 28 28 THR THR E . n A 1 338 ILE 338 29 29 ILE ILE E . n A 1 339 LEU 339 30 30 LEU LEU E . n A 1 340 TYR 340 31 31 TYR TYR E . n A 1 341 LYS 341 32 32 LYS LYS E . n A 1 342 LEU 342 33 33 LEU LEU E . n A 1 343 LYS 343 34 34 LYS LYS E . n A 1 344 LEU 344 35 35 LEU LEU E . n A 1 345 GLY 345 36 36 GLY GLY E . n A 1 346 GLN 346 37 37 GLN GLN E . n A 1 347 SER 347 38 38 SER SER E . n A 1 348 VAL 348 39 39 VAL VAL E . n A 1 349 THR 349 40 40 THR THR E . n A 1 350 THR 350 41 41 THR THR E . n A 1 351 ILE 351 42 42 ILE ILE E . n A 1 352 PRO 352 43 43 PRO PRO E . n A 1 353 THR 353 44 44 THR THR E . n A 1 354 VAL 354 45 45 VAL VAL E . n A 1 355 GLY 355 46 46 GLY GLY E . n A 1 356 PHE 356 47 47 PHE PHE E . n A 1 357 ASN 357 48 48 ASN ASN E . n A 1 358 VAL 358 49 49 VAL VAL E . n A 1 359 GLU 359 50 50 GLU GLU E . n A 1 360 THR 360 51 51 THR THR E . n A 1 361 VAL 361 52 52 VAL VAL E . n A 1 362 THR 362 53 53 THR THR E . n A 1 363 TYR 363 54 54 TYR TYR E . n A 1 364 LYS 364 55 55 LYS LYS E . n A 1 365 ASN 365 56 56 ASN ASN E . n A 1 366 VAL 366 57 57 VAL VAL E . n A 1 367 LYS 367 58 58 LYS LYS E . n A 1 368 PHE 368 59 59 PHE PHE E . n A 1 369 ASN 369 60 60 ASN ASN E . n A 1 370 VAL 370 61 61 VAL VAL E . n A 1 371 TRP 371 62 62 TRP TRP E . n A 1 372 ASP 372 63 63 ASP ASP E . n A 1 373 VAL 373 64 64 VAL VAL E . n A 1 374 GLY 374 65 65 GLY GLY E . n A 1 375 GLY 375 66 66 GLY GLY E . n A 1 376 GLN 376 67 67 GLN GLN E . n A 1 377 ASP 377 68 68 ASP ASP E . n A 1 378 LYS 378 69 69 LYS LYS E . n A 1 379 ILE 379 70 70 ILE ILE E . n A 1 380 ARG 380 71 71 ARG ARG E . n A 1 381 PRO 381 72 72 PRO PRO E . n A 1 382 LEU 382 73 73 LEU LEU E . n A 1 383 TRP 383 74 74 TRP TRP E . n A 1 384 ARG 384 75 75 ARG ARG E . n A 1 385 HIS 385 76 76 HIS HIS E . n A 1 386 TYR 386 77 77 TYR TYR E . n A 1 387 TYR 387 78 78 TYR TYR E . n A 1 388 THR 388 79 79 THR THR E . n A 1 389 GLY 389 80 80 GLY GLY E . n A 1 390 THR 390 81 81 THR THR E . n A 1 391 GLN 391 82 82 GLN GLN E . n A 1 392 GLY 392 83 83 GLY GLY E . n A 1 393 LEU 393 84 84 LEU LEU E . n A 1 394 ILE 394 85 85 ILE ILE E . n A 1 395 PHE 395 86 86 PHE PHE E . n A 1 396 VAL 396 87 87 VAL VAL E . n A 1 397 VAL 397 88 88 VAL VAL E . n A 1 398 ASP 398 89 89 ASP ASP E . n A 1 399 CYS 399 90 90 CYS CYS E . n A 1 400 ALA 400 91 91 ALA ALA E . n A 1 401 ASP 401 92 92 ASP ASP E . n A 1 402 ARG 402 93 93 ARG ARG E . n A 1 403 ASP 403 94 94 ASP ASP E . n A 1 404 ARG 404 95 95 ARG ARG E . n A 1 405 ILE 405 96 96 ILE ILE E . n A 1 406 ASP 406 97 97 ASP ASP E . n A 1 407 GLU 407 98 98 GLU GLU E . n A 1 408 ALA 408 99 99 ALA ALA E . n A 1 409 ARG 409 100 100 ARG ARG E . n A 1 410 GLN 410 101 101 GLN GLN E . n A 1 411 GLU 411 102 102 GLU GLU E . n A 1 412 LEU 412 103 103 LEU LEU E . n A 1 413 HIS 413 104 104 HIS HIS E . n A 1 414 ARG 414 105 105 ARG ARG E . n A 1 415 ILE 415 106 106 ILE ILE E . n A 1 416 ILE 416 107 107 ILE ILE E . n A 1 417 ASN 417 108 108 ASN ASN E . n A 1 418 ASP 418 109 109 ASP ASP E . n A 1 419 ARG 419 110 110 ARG ARG E . n A 1 420 GLU 420 111 111 GLU GLU E . n A 1 421 MET 421 112 112 MET MET E . n A 1 422 ARG 422 113 113 ARG ARG E . n A 1 423 ASP 423 114 114 ASP ASP E . n A 1 424 ALA 424 115 115 ALA ALA E . n A 1 425 ILE 425 116 116 ILE ILE E . n A 1 426 ILE 426 117 117 ILE ILE E . n A 1 427 LEU 427 118 118 LEU LEU E . n A 1 428 ILE 428 119 119 ILE ILE E . n A 1 429 PHE 429 120 120 PHE PHE E . n A 1 430 ALA 430 121 121 ALA ALA E . n A 1 431 ASN 431 122 122 ASN ASN E . n A 1 432 LYS 432 123 123 LYS LYS E . n A 1 433 GLN 433 124 124 GLN GLN E . n A 1 434 ASP 434 125 125 ASP ASP E . n A 1 435 LEU 435 126 126 LEU LEU E . n A 1 436 PRO 436 127 127 PRO PRO E . n A 1 437 ASP 437 128 128 ASP ASP E . n A 1 438 ALA 438 129 129 ALA ALA E . n A 1 439 MET 439 130 130 MET MET E . n A 1 440 LYS 440 131 131 LYS LYS E . n A 1 441 PRO 441 132 132 PRO PRO E . n A 1 442 HIS 442 133 133 HIS HIS E . n A 1 443 GLU 443 134 134 GLU GLU E . n A 1 444 ILE 444 135 135 ILE ILE E . n A 1 445 GLN 445 136 136 GLN GLN E . n A 1 446 GLU 446 137 137 GLU GLU E . n A 1 447 LYS 447 138 138 LYS LYS E . n A 1 448 LEU 448 139 139 LEU LEU E . n A 1 449 GLY 449 140 140 GLY GLY E . n A 1 450 LEU 450 141 141 LEU LEU E . n A 1 451 THR 451 142 142 THR THR E . n A 1 452 ARG 452 143 143 ARG ARG E . n A 1 453 ILE 453 144 144 ILE ILE E . n A 1 454 ARG 454 145 145 ARG ARG E . n A 1 455 ASP 455 146 146 ASP ASP E . n A 1 456 ARG 456 147 147 ARG ARG E . n A 1 457 ASN 457 148 148 ASN ASN E . n A 1 458 TRP 458 149 149 TRP TRP E . n A 1 459 TYR 459 150 150 TYR TYR E . n A 1 460 VAL 460 151 151 VAL VAL E . n A 1 461 GLN 461 152 152 GLN GLN E . n A 1 462 PRO 462 153 153 PRO PRO E . n A 1 463 SER 463 154 154 SER SER E . n A 1 464 CYS 464 155 155 CYS CYS E . n A 1 465 ALA 465 156 156 ALA ALA E . n A 1 466 THR 466 157 157 THR THR E . n A 1 467 SER 467 158 158 SER SER E . n A 1 468 GLY 468 159 159 GLY GLY E . n A 1 469 ASP 469 160 160 ASP ASP E . n A 1 470 GLY 470 161 161 GLY GLY E . n A 1 471 LEU 471 162 162 LEU LEU E . n A 1 472 TYR 472 163 163 TYR TYR E . n A 1 473 GLU 473 164 164 GLU GLU E . n A 1 474 GLY 474 165 165 GLY GLY E . n A 1 475 LEU 475 166 166 LEU LEU E . n A 1 476 THR 476 167 167 THR THR E . n A 1 477 TRP 477 168 168 TRP TRP E . n A 1 478 LEU 478 169 169 LEU LEU E . n A 1 479 THR 479 170 170 THR THR E . n A 1 480 SER 480 171 171 SER SER E . n A 1 481 ASN 481 172 172 ASN ASN E . n A 1 482 TYR 482 173 173 TYR TYR E . n A 1 483 LYS 483 174 174 LYS LYS E . n A 1 484 SER 484 175 ? ? ? E . n A 1 485 LYS 485 176 ? ? ? E . n A 1 486 LEU 486 177 ? ? ? E . n A 1 487 ALA 487 178 ? ? ? E . n A 1 488 ALA 488 179 ? ? ? E . n A 1 489 ALA 489 180 ? ? ? E . n A 1 490 LEU 490 181 ? ? ? E . n A 1 491 GLU 491 182 ? ? ? E . n A 1 492 HIS 492 183 ? ? ? E . n A 1 493 HIS 493 184 ? ? ? E . n A 1 494 HIS 494 185 ? ? ? E . n A 1 495 HIS 495 186 ? ? ? E . n A 1 496 HIS 496 187 ? ? ? E . n A 1 497 HIS 497 188 ? ? ? E . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 680 600 ZN ZN E . C 3 MG 1 681 168 MG MG E . D 4 GDP 1 682 167 GDP GDP E . E 5 AF3 1 683 169 AF3 AF3 E . F 3 MG 1 684 170 MG MG E . G 6 HOH 1 211 211 HOH HOH E . G 6 HOH 2 212 212 HOH HOH E . G 6 HOH 3 220 220 HOH HOH E . G 6 HOH 4 230 230 HOH HOH E . G 6 HOH 5 231 231 HOH HOH E . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 E ASP 606 ? CG ? A ASP 191 CG 2 1 Y 1 E ASP 606 ? OD1 ? A ASP 191 OD1 3 1 Y 1 E ASP 606 ? OD2 ? A ASP 191 OD2 4 1 Y 1 E ASN 11 ? CG ? A ASN 320 CG 5 1 Y 1 E ASN 11 ? OD1 ? A ASN 320 OD1 6 1 Y 1 E ASN 11 ? ND2 ? A ASN 320 ND2 7 1 Y 1 E LYS 12 ? CG ? A LYS 321 CG 8 1 Y 1 E LYS 12 ? CD ? A LYS 321 CD 9 1 Y 1 E LYS 12 ? CE ? A LYS 321 CE 10 1 Y 1 E LYS 12 ? NZ ? A LYS 321 NZ 11 1 Y 1 E GLU 13 ? CG ? A GLU 322 CG 12 1 Y 1 E GLU 13 ? CD ? A GLU 322 CD 13 1 Y 1 E GLU 13 ? OE1 ? A GLU 322 OE1 14 1 Y 1 E GLU 13 ? OE2 ? A GLU 322 OE2 15 1 Y 1 E LYS 174 ? CG ? A LYS 483 CG 16 1 Y 1 E LYS 174 ? CD ? A LYS 483 CD 17 1 Y 1 E LYS 174 ? CE ? A LYS 483 CE 18 1 Y 1 E LYS 174 ? NZ ? A LYS 483 NZ # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ProDC 'data collection' . ? 1 MOLREP phasing . ? 2 REFMAC refinement 5.2.0019 ? 3 XDS 'data reduction' . ? 4 XSCALE 'data scaling' . ? 5 # _cell.entry_id 3LVQ _cell.length_a 146.290 _cell.length_b 146.290 _cell.length_c 49.520 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3LVQ _symmetry.space_group_name_H-M 'P 62' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 171 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3LVQ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.79 _exptl_crystal.density_percent_sol 55.91 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '13% PEG 8000, 150mM Magnesium Acetate, 100mM MOPS(pH 7.5), VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2009-02-16 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SAGITALLY - HORIZONTALLY FOCUSED SI(111) MONOCHROMATOR' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X06SA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X06SA _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.98 # _reflns.entry_id 3LVQ _reflns.observed_criterion_sigma_I 1 _reflns.observed_criterion_sigma_F 1 _reflns.d_resolution_low 29.42 _reflns.d_resolution_high 3.38 _reflns.number_obs 8700 _reflns.number_all ? _reflns.pdbx_number_measured_all 80498 _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.066 _reflns.pdbx_Rsym_value 0.079 _reflns.pdbx_netI_over_sigmaI 22.52 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 9.25 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 3.38 _reflns_shell.d_res_low 3.5 _reflns_shell.percent_possible_all 99.8 _reflns_shell.Rmerge_I_obs 0.339 _reflns_shell.pdbx_Rsym_value 0.55 _reflns_shell.meanI_over_sigI_obs 4.94 _reflns_shell.pdbx_redundancy 9.45 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 847 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3LVQ _refine.ls_number_reflns_obs 8263 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 29.42 _refine.ls_d_res_high 3.38 _refine.ls_percent_reflns_obs 100.00 _refine.ls_R_factor_obs 0.22070 _refine.ls_R_factor_all 0.2207 _refine.ls_R_factor_R_work 0.21881 _refine.ls_R_factor_R_free 0.25680 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 435 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.934 _refine.correlation_coeff_Fo_to_Fc_free 0.904 _refine.B_iso_mean 136.436 _refine.aniso_B[1][1] -5.06 _refine.aniso_B[2][2] -5.06 _refine.aniso_B[3][3] 7.59 _refine.aniso_B[1][2] -2.53 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRIES 2B0o and 2J5X' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.558 _refine.overall_SU_ML 0.482 _refine.overall_SU_B 58.227 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3262 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 35 _refine_hist.number_atoms_solvent 5 _refine_hist.number_atoms_total 3302 _refine_hist.d_res_high 3.38 _refine_hist.d_res_low 29.42 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.008 0.022 ? 3354 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.146 1.977 ? 4550 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.630 5.000 ? 417 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 39.681 24.211 ? 152 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 18.641 15.000 ? 575 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 16.472 15.000 ? 25 'X-RAY DIFFRACTION' ? r_chiral_restr 0.082 0.200 ? 514 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.003 0.020 ? 2517 'X-RAY DIFFRACTION' ? r_nbd_refined 0.210 0.200 ? 1552 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.300 0.200 ? 2254 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.190 0.200 ? 117 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.059 0.200 ? 2 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.217 0.200 ? 29 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.115 0.200 ? 1 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 3.380 _refine_ls_shell.d_res_low 3.467 _refine_ls_shell.number_reflns_R_work 585 _refine_ls_shell.R_factor_R_work 0.272 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.299 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 30 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 585 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3LVQ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3LVQ _struct.title 'The crystal structure of ASAP3 in complex with Arf6 in transition state' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3LVQ _struct_keywords.pdbx_keywords 'PROTEIN TRANSPORT' _struct_keywords.text ;Arf, GAP, GDP, ASAP3, UPLC1, Arf6, ArfGAP, Linkers, Alternative splicing, ANK repeat, Coiled coil, Cytoplasm, Metal-binding, Phosphoprotein, Polymorphism, Zinc, Zinc-finger, Cell membrane, Endosome, ER-Golgi transport, Golgi apparatus, GTP-binding, Lipoprotein, Myristate, Nucleotide-binding, Protein transport, Transport ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 3 ? G N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP ASAP3_HUMAN Q8TDY4 1 ;GHDGEPHDLTKLLIAEVKSRPGNSQCCDCGAADPTWLSTNLGVLTCIQCSGVHRELGVRFSRMQSLTLDLLGPSELLLAL NMGNTSFNEVMEAQLPSHGGPKPSAESDMGTRRDYIMAKYVEHRFARRCTPEPQRLWTAICNRDLLSVLEAFANGQDFGQ PLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAG ETALDIARKKHHKECEELLEQAQAGTFAFPLHVDYSWVISTE ; 416 ? 2 PDB 3LVQ 3LVQ 1 NLSSDSSLSSPSALNSLSSPSALNSTASNSPGIEGLS 698 ? 3 UNP ARF6_HUMAN P62330 1 ;NKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDC ADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLT SNYKS ; 11 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3LVQ E 1 ? 282 ? Q8TDY4 416 ? 697 ? 416 697 2 2 3LVQ E 283 ? 319 ? 3LVQ 698 ? 734 ? 698 734 3 3 3LVQ E 320 ? 484 ? P62330 11 ? 175 ? 11 175 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 3 3LVQ LYS E 485 ? UNP P62330 ? ? 'expression tag' 176 1 3 3LVQ LEU E 486 ? UNP P62330 ? ? 'expression tag' 177 2 3 3LVQ ALA E 487 ? UNP P62330 ? ? 'expression tag' 178 3 3 3LVQ ALA E 488 ? UNP P62330 ? ? 'expression tag' 179 4 3 3LVQ ALA E 489 ? UNP P62330 ? ? 'expression tag' 180 5 3 3LVQ LEU E 490 ? UNP P62330 ? ? 'expression tag' 181 6 3 3LVQ GLU E 491 ? UNP P62330 ? ? 'expression tag' 182 7 3 3LVQ HIS E 492 ? UNP P62330 ? ? 'expression tag' 183 8 3 3LVQ HIS E 493 ? UNP P62330 ? ? 'expression tag' 184 9 3 3LVQ HIS E 494 ? UNP P62330 ? ? 'expression tag' 185 10 3 3LVQ HIS E 495 ? UNP P62330 ? ? 'expression tag' 186 11 3 3LVQ HIS E 496 ? UNP P62330 ? ? 'expression tag' 187 12 3 3LVQ HIS E 497 ? UNP P62330 ? ? 'expression tag' 188 13 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 8 ? SER A 19 ? ASP E 423 SER E 434 1 ? 12 HELX_P HELX_P2 2 CYS A 46 ? GLY A 57 ? CYS E 461 GLY E 472 1 ? 12 HELX_P HELX_P3 3 GLY A 72 ? LEU A 77 ? GLY E 487 LEU E 492 5 ? 6 HELX_P HELX_P4 4 GLY A 83 ? GLU A 92 ? GLY E 498 GLU E 507 1 ? 10 HELX_P HELX_P5 5 ASP A 108 ? VAL A 121 ? ASP E 523 VAL E 536 1 ? 14 HELX_P HELX_P6 6 GLU A 132 ? ARG A 143 ? GLU E 547 ARG E 558 1 ? 12 HELX_P HELX_P7 7 ASP A 144 ? ASN A 154 ? ASP E 559 ASN E 569 1 ? 11 HELX_P HELX_P8 8 LEU A 173 ? VAL A 181 ? LEU E 588 VAL E 596 1 ? 9 HELX_P HELX_P9 9 SER A 186 ? GLY A 197 ? SER E 601 GLY E 612 1 ? 12 HELX_P HELX_P10 10 THR A 209 ? ALA A 215 ? THR E 624 ALA E 630 1 ? 7 HELX_P HELX_P11 11 GLN A 219 ? GLY A 229 ? GLN E 634 GLY E 644 1 ? 11 HELX_P HELX_P12 12 THR A 242 ? LYS A 250 ? THR E 657 LYS E 665 1 ? 9 HELX_P HELX_P13 13 HIS A 252 ? ALA A 262 ? HIS E 667 ALA E 677 1 ? 11 HELX_P HELX_P14 14 GLY A 334 ? GLY A 345 ? GLY E 25 GLY E 36 1 ? 12 HELX_P HELX_P15 15 GLN A 376 ? THR A 388 ? GLN E 67 THR E 79 5 ? 13 HELX_P HELX_P16 16 ASP A 401 ? ASP A 403 ? ASP E 92 ASP E 94 5 ? 3 HELX_P HELX_P17 17 ARG A 404 ? ASN A 417 ? ARG E 95 ASN E 108 1 ? 14 HELX_P HELX_P18 18 ASP A 418 ? ARG A 422 ? ASP E 109 ARG E 113 5 ? 5 HELX_P HELX_P19 19 LYS A 440 ? LEU A 448 ? LYS E 131 LEU E 139 1 ? 9 HELX_P HELX_P20 20 GLY A 470 ? TYR A 482 ? GLY E 161 TYR E 173 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 29 SG ? ? ? 1_555 A CYS 49 SG ? ? E CYS 444 E CYS 464 1_555 ? ? ? ? ? ? ? 2.976 ? ? metalc1 metalc ? ? A THR 336 OG1 ? ? ? 1_555 C MG . MG ? ? E THR 27 E MG 681 1_555 ? ? ? ? ? ? ? 2.703 ? ? metalc2 metalc ? ? A THR 353 OG1 ? ? ? 1_555 C MG . MG ? ? E THR 44 E MG 681 1_555 ? ? ? ? ? ? ? 1.954 ? ? metalc3 metalc ? ? G HOH . O ? ? ? 1_555 C MG . MG ? ? E HOH 220 E MG 681 1_555 ? ? ? ? ? ? ? 2.388 ? ? metalc4 metalc ? ? G HOH . O ? ? ? 1_555 C MG . MG ? ? E HOH 230 E MG 681 1_555 ? ? ? ? ? ? ? 2.733 ? ? metalc5 metalc ? ? A CYS 26 SG ? ? ? 1_555 B ZN . ZN ? ? E CYS 441 E ZN 680 1_555 ? ? ? ? ? ? ? 2.203 ? ? metalc6 metalc ? ? A CYS 46 SG ? ? ? 1_555 B ZN . ZN ? ? E CYS 461 E ZN 680 1_555 ? ? ? ? ? ? ? 2.171 ? ? metalc7 metalc ? ? A CYS 49 SG ? ? ? 1_555 B ZN . ZN ? ? E CYS 464 E ZN 680 1_555 ? ? ? ? ? ? ? 2.101 ? ? metalc8 metalc ? ? C MG . MG ? ? ? 1_555 D GDP . O2B ? ? E MG 681 E GDP 682 1_555 ? ? ? ? ? ? ? 2.360 ? ? metalc9 metalc ? ? C MG . MG ? ? ? 1_555 D GDP . O3B ? ? E MG 681 E GDP 682 1_555 ? ? ? ? ? ? ? 2.625 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG1 ? A THR 336 ? E THR 27 ? 1_555 MG ? C MG . ? E MG 681 ? 1_555 OG1 ? A THR 353 ? E THR 44 ? 1_555 82.7 ? 2 OG1 ? A THR 336 ? E THR 27 ? 1_555 MG ? C MG . ? E MG 681 ? 1_555 O ? G HOH . ? E HOH 220 ? 1_555 67.4 ? 3 OG1 ? A THR 353 ? E THR 44 ? 1_555 MG ? C MG . ? E MG 681 ? 1_555 O ? G HOH . ? E HOH 220 ? 1_555 91.4 ? 4 OG1 ? A THR 336 ? E THR 27 ? 1_555 MG ? C MG . ? E MG 681 ? 1_555 O ? G HOH . ? E HOH 230 ? 1_555 150.8 ? 5 OG1 ? A THR 353 ? E THR 44 ? 1_555 MG ? C MG . ? E MG 681 ? 1_555 O ? G HOH . ? E HOH 230 ? 1_555 69.1 ? 6 O ? G HOH . ? E HOH 220 ? 1_555 MG ? C MG . ? E MG 681 ? 1_555 O ? G HOH . ? E HOH 230 ? 1_555 119.3 ? 7 OG1 ? A THR 336 ? E THR 27 ? 1_555 MG ? C MG . ? E MG 681 ? 1_555 O2B ? D GDP . ? E GDP 682 ? 1_555 85.4 ? 8 OG1 ? A THR 353 ? E THR 44 ? 1_555 MG ? C MG . ? E MG 681 ? 1_555 O2B ? D GDP . ? E GDP 682 ? 1_555 165.3 ? 9 O ? G HOH . ? E HOH 220 ? 1_555 MG ? C MG . ? E MG 681 ? 1_555 O2B ? D GDP . ? E GDP 682 ? 1_555 76.0 ? 10 O ? G HOH . ? E HOH 230 ? 1_555 MG ? C MG . ? E MG 681 ? 1_555 O2B ? D GDP . ? E GDP 682 ? 1_555 123.6 ? 11 OG1 ? A THR 336 ? E THR 27 ? 1_555 MG ? C MG . ? E MG 681 ? 1_555 O3B ? D GDP . ? E GDP 682 ? 1_555 124.8 ? 12 OG1 ? A THR 353 ? E THR 44 ? 1_555 MG ? C MG . ? E MG 681 ? 1_555 O3B ? D GDP . ? E GDP 682 ? 1_555 125.4 ? 13 O ? G HOH . ? E HOH 220 ? 1_555 MG ? C MG . ? E MG 681 ? 1_555 O3B ? D GDP . ? E GDP 682 ? 1_555 65.8 ? 14 O ? G HOH . ? E HOH 230 ? 1_555 MG ? C MG . ? E MG 681 ? 1_555 O3B ? D GDP . ? E GDP 682 ? 1_555 80.0 ? 15 O2B ? D GDP . ? E GDP 682 ? 1_555 MG ? C MG . ? E MG 681 ? 1_555 O3B ? D GDP . ? E GDP 682 ? 1_555 56.3 ? 16 SG ? A CYS 26 ? E CYS 441 ? 1_555 ZN ? B ZN . ? E ZN 680 ? 1_555 SG ? A CYS 46 ? E CYS 461 ? 1_555 111.7 ? 17 SG ? A CYS 26 ? E CYS 441 ? 1_555 ZN ? B ZN . ? E ZN 680 ? 1_555 SG ? A CYS 49 ? E CYS 464 ? 1_555 106.7 ? 18 SG ? A CYS 46 ? E CYS 461 ? 1_555 ZN ? B ZN . ? E ZN 680 ? 1_555 SG ? A CYS 49 ? E CYS 464 ? 1_555 106.4 ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id CYS _pdbx_modification_feature.label_asym_id A _pdbx_modification_feature.label_seq_id 29 _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id CYS _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 49 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id CYS _pdbx_modification_feature.auth_asym_id E _pdbx_modification_feature.auth_seq_id 444 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id CYS _pdbx_modification_feature.modified_residue_auth_asym_id E _pdbx_modification_feature.modified_residue_auth_seq_id 464 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom SG _pdbx_modification_feature.modified_residue_id_linking_atom SG _pdbx_modification_feature.modified_residue_id . _pdbx_modification_feature.ref_pcm_id . _pdbx_modification_feature.ref_comp_id . _pdbx_modification_feature.type None _pdbx_modification_feature.category 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 44 ? THR A 45 ? LEU E 459 THR E 460 A 2 TRP A 36 ? SER A 38 ? TRP E 451 SER E 453 A 3 MET A 63 ? SER A 65 ? MET E 478 SER E 480 B 1 PHE A 356 ? THR A 362 ? PHE E 47 THR E 53 B 2 LYS A 367 ? VAL A 373 ? LYS E 58 VAL E 64 B 3 GLU A 322 ? LEU A 328 ? GLU E 13 LEU E 19 B 4 GLY A 392 ? ASP A 398 ? GLY E 83 ASP E 89 B 5 ILE A 425 ? ASN A 431 ? ILE E 116 ASN E 122 B 6 TRP A 458 ? PRO A 462 ? TRP E 149 PRO E 153 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O THR A 45 ? O THR E 460 N TRP A 36 ? N TRP E 451 A 2 3 N LEU A 37 ? N LEU E 452 O GLN A 64 ? O GLN E 479 B 1 2 N ASN A 357 ? N ASN E 48 O ASP A 372 ? O ASP E 63 B 2 3 O LYS A 367 ? O LYS E 58 N MET A 323 ? N MET E 14 B 3 4 N LEU A 326 ? N LEU E 17 O ILE A 394 ? O ILE E 85 B 4 5 N LEU A 393 ? N LEU E 84 O LEU A 427 ? O LEU E 118 B 5 6 N ILE A 428 ? N ILE E 119 O GLN A 461 ? O GLN E 152 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software E ZN 680 ? 5 'BINDING SITE FOR RESIDUE ZN E 680' AC2 Software E MG 681 ? 7 'BINDING SITE FOR RESIDUE MG E 681' AC3 Software E GDP 682 ? 20 'BINDING SITE FOR RESIDUE GDP E 682' AC4 Software E AF3 683 ? 12 'BINDING SITE FOR RESIDUE AF3 E 683' AC5 Software E MG 684 ? 2 'BINDING SITE FOR RESIDUE MG E 684' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 CYS A 26 ? CYS E 441 . ? 1_555 ? 2 AC1 5 CYS A 29 ? CYS E 444 . ? 1_555 ? 3 AC1 5 CYS A 46 ? CYS E 461 . ? 1_555 ? 4 AC1 5 CYS A 49 ? CYS E 464 . ? 1_555 ? 5 AC1 5 ARG A 112 ? ARG E 527 . ? 1_555 ? 6 AC2 7 LYS A 335 ? LYS E 26 . ? 1_555 ? 7 AC2 7 THR A 336 ? THR E 27 . ? 1_555 ? 8 AC2 7 THR A 353 ? THR E 44 . ? 1_555 ? 9 AC2 7 HOH G . ? HOH E 220 . ? 1_555 ? 10 AC2 7 HOH G . ? HOH E 230 . ? 1_555 ? 11 AC2 7 GDP D . ? GDP E 682 . ? 1_555 ? 12 AC2 7 AF3 E . ? AF3 E 683 . ? 1_555 ? 13 AC3 20 ALA A 332 ? ALA E 23 . ? 1_555 ? 14 AC3 20 ALA A 333 ? ALA E 24 . ? 1_555 ? 15 AC3 20 GLY A 334 ? GLY E 25 . ? 1_555 ? 16 AC3 20 LYS A 335 ? LYS E 26 . ? 1_555 ? 17 AC3 20 THR A 336 ? THR E 27 . ? 1_555 ? 18 AC3 20 THR A 337 ? THR E 28 . ? 1_555 ? 19 AC3 20 THR A 350 ? THR E 41 . ? 1_555 ? 20 AC3 20 ASN A 431 ? ASN E 122 . ? 1_555 ? 21 AC3 20 LYS A 432 ? LYS E 123 . ? 1_555 ? 22 AC3 20 ASP A 434 ? ASP E 125 . ? 1_555 ? 23 AC3 20 LEU A 435 ? LEU E 126 . ? 1_555 ? 24 AC3 20 CYS A 464 ? CYS E 155 . ? 1_555 ? 25 AC3 20 ALA A 465 ? ALA E 156 . ? 1_555 ? 26 AC3 20 THR A 466 ? THR E 157 . ? 1_555 ? 27 AC3 20 HOH G . ? HOH E 220 . ? 1_555 ? 28 AC3 20 GLY A 51 ? GLY E 466 . ? 1_555 ? 29 AC3 20 ARG A 54 ? ARG E 469 . ? 1_555 ? 30 AC3 20 GLU A 55 ? GLU E 470 . ? 1_555 ? 31 AC3 20 MG C . ? MG E 681 . ? 1_555 ? 32 AC3 20 AF3 E . ? AF3 E 683 . ? 1_555 ? 33 AC4 12 ASP A 331 ? ASP E 22 . ? 1_555 ? 34 AC4 12 ALA A 332 ? ALA E 23 . ? 1_555 ? 35 AC4 12 LYS A 335 ? LYS E 26 . ? 1_555 ? 36 AC4 12 PRO A 352 ? PRO E 43 . ? 1_555 ? 37 AC4 12 THR A 353 ? THR E 44 . ? 1_555 ? 38 AC4 12 GLY A 375 ? GLY E 66 . ? 1_555 ? 39 AC4 12 GLN A 376 ? GLN E 67 . ? 1_555 ? 40 AC4 12 HOH G . ? HOH E 220 . ? 1_555 ? 41 AC4 12 HOH G . ? HOH E 230 . ? 1_555 ? 42 AC4 12 ARG A 54 ? ARG E 469 . ? 1_555 ? 43 AC4 12 MG C . ? MG E 681 . ? 1_555 ? 44 AC4 12 GDP D . ? GDP E 682 . ? 1_555 ? 45 AC5 2 ASP A 377 ? ASP E 68 . ? 1_555 ? 46 AC5 2 GLN A 64 ? GLN E 479 . ? 1_555 ? # _pdbx_entry_details.entry_id 3LVQ _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'NLSSDSSLSSPSALNSLSSPSALNSTASNSPGIEGLS IS A FLEXIBLE LINKER REGION.' _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 AL E AF3 683 ? ? O E HOH 230 ? ? 1.73 2 1 NZ E LYS 26 ? ? F1 E AF3 683 ? ? 1.83 3 1 F2 E AF3 683 ? ? O E HOH 230 ? ? 1.85 4 1 O3B E GDP 682 ? ? AL E AF3 683 ? ? 2.01 5 1 OG1 E THR 44 ? ? F2 E AF3 683 ? ? 2.12 6 1 F1 E AF3 683 ? ? O E HOH 230 ? ? 2.16 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C E ASP 448 ? ? N E PRO 449 ? ? CA E PRO 449 ? ? 128.30 119.30 9.00 1.50 Y 2 1 C E LEU 126 ? ? N E PRO 127 ? ? CA E PRO 127 ? ? 128.93 119.30 9.63 1.50 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN E 438 ? ? -76.18 21.30 2 1 ASP E 448 ? ? -14.20 100.78 3 1 MET E 497 ? ? -118.59 -83.73 4 1 GLN E 509 ? ? -83.78 49.36 5 1 PRO E 516 ? ? -55.58 -7.10 6 1 CYS E 544 ? ? 170.20 105.54 7 1 ASP E 572 ? ? 64.67 94.49 8 1 PRO E 580 ? ? -74.60 -133.88 9 1 HIS E 614 ? ? -102.53 59.81 10 1 ALA E 619 ? ? 57.99 -146.64 11 1 ALA E 620 ? ? -66.46 -74.20 12 1 ASP E 621 ? ? -89.96 34.57 13 1 ARG E 645 ? ? 44.95 73.08 14 1 ASN E 652 ? ? -106.04 -152.70 15 1 LEU E 19 ? ? -113.38 -168.72 16 1 GLN E 82 ? ? -95.04 -60.09 17 1 GLU E 111 ? ? -79.94 25.87 18 1 MET E 112 ? ? -143.72 -17.19 19 1 ASP E 114 ? ? -92.85 37.07 20 1 PRO E 127 ? ? -31.46 -88.26 21 1 MET E 130 ? ? 78.66 97.27 22 1 ARG E 143 ? ? -96.24 47.50 23 1 TYR E 150 ? ? -177.78 112.02 24 1 TYR E 173 ? ? -101.15 65.46 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 E GLY 416 ? A GLY 1 2 1 Y 1 E HIS 417 ? A HIS 2 3 1 Y 1 E ASP 418 ? A ASP 3 4 1 Y 1 E GLY 419 ? A GLY 4 5 1 Y 1 E GLU 420 ? A GLU 5 6 1 Y 1 E PRO 421 ? A PRO 6 7 1 Y 1 E HIS 422 ? A HIS 7 8 1 Y 1 E PRO 546 ? A PRO 131 9 1 Y 1 E GLY 680 ? A GLY 265 10 1 Y 1 E THR 681 ? A THR 266 11 1 Y 1 E PHE 682 ? A PHE 267 12 1 Y 1 E ALA 683 ? A ALA 268 13 1 Y 1 E PHE 684 ? A PHE 269 14 1 Y 1 E PRO 685 ? A PRO 270 15 1 Y 1 E LEU 686 ? A LEU 271 16 1 Y 1 E HIS 687 ? A HIS 272 17 1 Y 1 E VAL 688 ? A VAL 273 18 1 Y 1 E ASP 689 ? A ASP 274 19 1 Y 1 E TYR 690 ? A TYR 275 20 1 Y 1 E SER 691 ? A SER 276 21 1 Y 1 E TRP 692 ? A TRP 277 22 1 Y 1 E VAL 693 ? A VAL 278 23 1 Y 1 E ILE 694 ? A ILE 279 24 1 Y 1 E SER 695 ? A SER 280 25 1 Y 1 E THR 696 ? A THR 281 26 1 Y 1 E GLU 697 ? A GLU 282 27 1 Y 1 E ASN 698 ? A ASN 283 28 1 Y 1 E LEU 699 ? A LEU 284 29 1 Y 1 E SER 700 ? A SER 285 30 1 Y 1 E SER 701 ? A SER 286 31 1 Y 1 E ASP 702 ? A ASP 287 32 1 Y 1 E SER 703 ? A SER 288 33 1 Y 1 E SER 704 ? A SER 289 34 1 Y 1 E LEU 705 ? A LEU 290 35 1 Y 1 E SER 706 ? A SER 291 36 1 Y 1 E SER 707 ? A SER 292 37 1 Y 1 E PRO 708 ? A PRO 293 38 1 Y 1 E SER 709 ? A SER 294 39 1 Y 1 E ALA 710 ? A ALA 295 40 1 Y 1 E LEU 711 ? A LEU 296 41 1 Y 1 E ASN 712 ? A ASN 297 42 1 Y 1 E SER 713 ? A SER 298 43 1 Y 1 E LEU 714 ? A LEU 299 44 1 Y 1 E SER 715 ? A SER 300 45 1 Y 1 E SER 716 ? A SER 301 46 1 Y 1 E PRO 717 ? A PRO 302 47 1 Y 1 E SER 718 ? A SER 303 48 1 Y 1 E ALA 719 ? A ALA 304 49 1 Y 1 E LEU 720 ? A LEU 305 50 1 Y 1 E ASN 721 ? A ASN 306 51 1 Y 1 E SER 722 ? A SER 307 52 1 Y 1 E THR 723 ? A THR 308 53 1 Y 1 E ALA 724 ? A ALA 309 54 1 Y 1 E SER 725 ? A SER 310 55 1 Y 1 E ASN 726 ? A ASN 311 56 1 Y 1 E SER 727 ? A SER 312 57 1 Y 1 E PRO 728 ? A PRO 313 58 1 Y 1 E GLY 729 ? A GLY 314 59 1 Y 1 E ILE 730 ? A ILE 315 60 1 Y 1 E GLU 731 ? A GLU 316 61 1 Y 1 E GLY 732 ? A GLY 317 62 1 Y 1 E LEU 733 ? A LEU 318 63 1 Y 1 E SER 734 ? A SER 319 64 1 Y 1 E SER 175 ? A SER 484 65 1 Y 1 E LYS 176 ? A LYS 485 66 1 Y 1 E LEU 177 ? A LEU 486 67 1 Y 1 E ALA 178 ? A ALA 487 68 1 Y 1 E ALA 179 ? A ALA 488 69 1 Y 1 E ALA 180 ? A ALA 489 70 1 Y 1 E LEU 181 ? A LEU 490 71 1 Y 1 E GLU 182 ? A GLU 491 72 1 Y 1 E HIS 183 ? A HIS 492 73 1 Y 1 E HIS 184 ? A HIS 493 74 1 Y 1 E HIS 185 ? A HIS 494 75 1 Y 1 E HIS 186 ? A HIS 495 76 1 Y 1 E HIS 187 ? A HIS 496 77 1 Y 1 E HIS 188 ? A HIS 497 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal AF3 AL AL N N 1 AF3 F1 F N N 2 AF3 F2 F N N 3 AF3 F3 F N N 4 ALA N N N N 5 ALA CA C N S 6 ALA C C N N 7 ALA O O N N 8 ALA CB C N N 9 ALA OXT O N N 10 ALA H H N N 11 ALA H2 H N N 12 ALA HA H N N 13 ALA HB1 H N N 14 ALA HB2 H N N 15 ALA HB3 H N N 16 ALA HXT H N N 17 ARG N N N N 18 ARG CA C N S 19 ARG C C N N 20 ARG O O N N 21 ARG CB C N N 22 ARG CG C N N 23 ARG CD C N N 24 ARG NE N N N 25 ARG CZ C N N 26 ARG NH1 N N N 27 ARG NH2 N N N 28 ARG OXT O N N 29 ARG H H N N 30 ARG H2 H N N 31 ARG HA H N N 32 ARG HB2 H N N 33 ARG HB3 H N N 34 ARG HG2 H N N 35 ARG HG3 H N N 36 ARG HD2 H N N 37 ARG HD3 H N N 38 ARG HE H N N 39 ARG HH11 H N N 40 ARG HH12 H N N 41 ARG HH21 H N N 42 ARG HH22 H N N 43 ARG HXT H N N 44 ASN N N N N 45 ASN CA C N S 46 ASN C C N N 47 ASN O O N N 48 ASN CB C N N 49 ASN CG C N N 50 ASN OD1 O N N 51 ASN ND2 N N N 52 ASN OXT O N N 53 ASN H H N N 54 ASN H2 H N N 55 ASN HA H N N 56 ASN HB2 H N N 57 ASN HB3 H N N 58 ASN HD21 H N N 59 ASN HD22 H N N 60 ASN HXT H N N 61 ASP N N N N 62 ASP CA C N S 63 ASP C C N N 64 ASP O O N N 65 ASP CB C N N 66 ASP CG C N N 67 ASP OD1 O N N 68 ASP OD2 O N N 69 ASP OXT O N N 70 ASP H H N N 71 ASP H2 H N N 72 ASP HA H N N 73 ASP HB2 H N N 74 ASP HB3 H N N 75 ASP HD2 H N N 76 ASP HXT H N N 77 CYS N N N N 78 CYS CA C N R 79 CYS C C N N 80 CYS O O N N 81 CYS CB C N N 82 CYS SG S N N 83 CYS OXT O N N 84 CYS H H N N 85 CYS H2 H N N 86 CYS HA H N N 87 CYS HB2 H N N 88 CYS HB3 H N N 89 CYS HG H N N 90 CYS HXT H N N 91 GDP PB P N N 92 GDP O1B O N N 93 GDP O2B O N N 94 GDP O3B O N N 95 GDP O3A O N N 96 GDP PA P N N 97 GDP O1A O N N 98 GDP O2A O N N 99 GDP "O5'" O N N 100 GDP "C5'" C N N 101 GDP "C4'" C N R 102 GDP "O4'" O N N 103 GDP "C3'" C N S 104 GDP "O3'" O N N 105 GDP "C2'" C N R 106 GDP "O2'" O N N 107 GDP "C1'" C N R 108 GDP N9 N Y N 109 GDP C8 C Y N 110 GDP N7 N Y N 111 GDP C5 C Y N 112 GDP C6 C N N 113 GDP O6 O N N 114 GDP N1 N N N 115 GDP C2 C N N 116 GDP N2 N N N 117 GDP N3 N N N 118 GDP C4 C Y N 119 GDP HOB2 H N N 120 GDP HOB3 H N N 121 GDP HOA2 H N N 122 GDP "H5'" H N N 123 GDP "H5''" H N N 124 GDP "H4'" H N N 125 GDP "H3'" H N N 126 GDP "HO3'" H N N 127 GDP "H2'" H N N 128 GDP "HO2'" H N N 129 GDP "H1'" H N N 130 GDP H8 H N N 131 GDP HN1 H N N 132 GDP HN21 H N N 133 GDP HN22 H N N 134 GLN N N N N 135 GLN CA C N S 136 GLN C C N N 137 GLN O O N N 138 GLN CB C N N 139 GLN CG C N N 140 GLN CD C N N 141 GLN OE1 O N N 142 GLN NE2 N N N 143 GLN OXT O N N 144 GLN H H N N 145 GLN H2 H N N 146 GLN HA H N N 147 GLN HB2 H N N 148 GLN HB3 H N N 149 GLN HG2 H N N 150 GLN HG3 H N N 151 GLN HE21 H N N 152 GLN HE22 H N N 153 GLN HXT H N N 154 GLU N N N N 155 GLU CA C N S 156 GLU C C N N 157 GLU O O N N 158 GLU CB C N N 159 GLU CG C N N 160 GLU CD C N N 161 GLU OE1 O N N 162 GLU OE2 O N N 163 GLU OXT O N N 164 GLU H H N N 165 GLU H2 H N N 166 GLU HA H N N 167 GLU HB2 H N N 168 GLU HB3 H N N 169 GLU HG2 H N N 170 GLU HG3 H N N 171 GLU HE2 H N N 172 GLU HXT H N N 173 GLY N N N N 174 GLY CA C N N 175 GLY C C N N 176 GLY O O N N 177 GLY OXT O N N 178 GLY H H N N 179 GLY H2 H N N 180 GLY HA2 H N N 181 GLY HA3 H N N 182 GLY HXT H N N 183 HIS N N N N 184 HIS CA C N S 185 HIS C C N N 186 HIS O O N N 187 HIS CB C N N 188 HIS CG C Y N 189 HIS ND1 N Y N 190 HIS CD2 C Y N 191 HIS CE1 C Y N 192 HIS NE2 N Y N 193 HIS OXT O N N 194 HIS H H N N 195 HIS H2 H N N 196 HIS HA H N N 197 HIS HB2 H N N 198 HIS HB3 H N N 199 HIS HD1 H N N 200 HIS HD2 H N N 201 HIS HE1 H N N 202 HIS HE2 H N N 203 HIS HXT H N N 204 HOH O O N N 205 HOH H1 H N N 206 HOH H2 H N N 207 ILE N N N N 208 ILE CA C N S 209 ILE C C N N 210 ILE O O N N 211 ILE CB C N S 212 ILE CG1 C N N 213 ILE CG2 C N N 214 ILE CD1 C N N 215 ILE OXT O N N 216 ILE H H N N 217 ILE H2 H N N 218 ILE HA H N N 219 ILE HB H N N 220 ILE HG12 H N N 221 ILE HG13 H N N 222 ILE HG21 H N N 223 ILE HG22 H N N 224 ILE HG23 H N N 225 ILE HD11 H N N 226 ILE HD12 H N N 227 ILE HD13 H N N 228 ILE HXT H N N 229 LEU N N N N 230 LEU CA C N S 231 LEU C C N N 232 LEU O O N N 233 LEU CB C N N 234 LEU CG C N N 235 LEU CD1 C N N 236 LEU CD2 C N N 237 LEU OXT O N N 238 LEU H H N N 239 LEU H2 H N N 240 LEU HA H N N 241 LEU HB2 H N N 242 LEU HB3 H N N 243 LEU HG H N N 244 LEU HD11 H N N 245 LEU HD12 H N N 246 LEU HD13 H N N 247 LEU HD21 H N N 248 LEU HD22 H N N 249 LEU HD23 H N N 250 LEU HXT H N N 251 LYS N N N N 252 LYS CA C N S 253 LYS C C N N 254 LYS O O N N 255 LYS CB C N N 256 LYS CG C N N 257 LYS CD C N N 258 LYS CE C N N 259 LYS NZ N N N 260 LYS OXT O N N 261 LYS H H N N 262 LYS H2 H N N 263 LYS HA H N N 264 LYS HB2 H N N 265 LYS HB3 H N N 266 LYS HG2 H N N 267 LYS HG3 H N N 268 LYS HD2 H N N 269 LYS HD3 H N N 270 LYS HE2 H N N 271 LYS HE3 H N N 272 LYS HZ1 H N N 273 LYS HZ2 H N N 274 LYS HZ3 H N N 275 LYS HXT H N N 276 MET N N N N 277 MET CA C N S 278 MET C C N N 279 MET O O N N 280 MET CB C N N 281 MET CG C N N 282 MET SD S N N 283 MET CE C N N 284 MET OXT O N N 285 MET H H N N 286 MET H2 H N N 287 MET HA H N N 288 MET HB2 H N N 289 MET HB3 H N N 290 MET HG2 H N N 291 MET HG3 H N N 292 MET HE1 H N N 293 MET HE2 H N N 294 MET HE3 H N N 295 MET HXT H N N 296 MG MG MG N N 297 PHE N N N N 298 PHE CA C N S 299 PHE C C N N 300 PHE O O N N 301 PHE CB C N N 302 PHE CG C Y N 303 PHE CD1 C Y N 304 PHE CD2 C Y N 305 PHE CE1 C Y N 306 PHE CE2 C Y N 307 PHE CZ C Y N 308 PHE OXT O N N 309 PHE H H N N 310 PHE H2 H N N 311 PHE HA H N N 312 PHE HB2 H N N 313 PHE HB3 H N N 314 PHE HD1 H N N 315 PHE HD2 H N N 316 PHE HE1 H N N 317 PHE HE2 H N N 318 PHE HZ H N N 319 PHE HXT H N N 320 PRO N N N N 321 PRO CA C N S 322 PRO C C N N 323 PRO O O N N 324 PRO CB C N N 325 PRO CG C N N 326 PRO CD C N N 327 PRO OXT O N N 328 PRO H H N N 329 PRO HA H N N 330 PRO HB2 H N N 331 PRO HB3 H N N 332 PRO HG2 H N N 333 PRO HG3 H N N 334 PRO HD2 H N N 335 PRO HD3 H N N 336 PRO HXT H N N 337 SER N N N N 338 SER CA C N S 339 SER C C N N 340 SER O O N N 341 SER CB C N N 342 SER OG O N N 343 SER OXT O N N 344 SER H H N N 345 SER H2 H N N 346 SER HA H N N 347 SER HB2 H N N 348 SER HB3 H N N 349 SER HG H N N 350 SER HXT H N N 351 THR N N N N 352 THR CA C N S 353 THR C C N N 354 THR O O N N 355 THR CB C N R 356 THR OG1 O N N 357 THR CG2 C N N 358 THR OXT O N N 359 THR H H N N 360 THR H2 H N N 361 THR HA H N N 362 THR HB H N N 363 THR HG1 H N N 364 THR HG21 H N N 365 THR HG22 H N N 366 THR HG23 H N N 367 THR HXT H N N 368 TRP N N N N 369 TRP CA C N S 370 TRP C C N N 371 TRP O O N N 372 TRP CB C N N 373 TRP CG C Y N 374 TRP CD1 C Y N 375 TRP CD2 C Y N 376 TRP NE1 N Y N 377 TRP CE2 C Y N 378 TRP CE3 C Y N 379 TRP CZ2 C Y N 380 TRP CZ3 C Y N 381 TRP CH2 C Y N 382 TRP OXT O N N 383 TRP H H N N 384 TRP H2 H N N 385 TRP HA H N N 386 TRP HB2 H N N 387 TRP HB3 H N N 388 TRP HD1 H N N 389 TRP HE1 H N N 390 TRP HE3 H N N 391 TRP HZ2 H N N 392 TRP HZ3 H N N 393 TRP HH2 H N N 394 TRP HXT H N N 395 TYR N N N N 396 TYR CA C N S 397 TYR C C N N 398 TYR O O N N 399 TYR CB C N N 400 TYR CG C Y N 401 TYR CD1 C Y N 402 TYR CD2 C Y N 403 TYR CE1 C Y N 404 TYR CE2 C Y N 405 TYR CZ C Y N 406 TYR OH O N N 407 TYR OXT O N N 408 TYR H H N N 409 TYR H2 H N N 410 TYR HA H N N 411 TYR HB2 H N N 412 TYR HB3 H N N 413 TYR HD1 H N N 414 TYR HD2 H N N 415 TYR HE1 H N N 416 TYR HE2 H N N 417 TYR HH H N N 418 TYR HXT H N N 419 VAL N N N N 420 VAL CA C N S 421 VAL C C N N 422 VAL O O N N 423 VAL CB C N N 424 VAL CG1 C N N 425 VAL CG2 C N N 426 VAL OXT O N N 427 VAL H H N N 428 VAL H2 H N N 429 VAL HA H N N 430 VAL HB H N N 431 VAL HG11 H N N 432 VAL HG12 H N N 433 VAL HG13 H N N 434 VAL HG21 H N N 435 VAL HG22 H N N 436 VAL HG23 H N N 437 VAL HXT H N N 438 ZN ZN ZN N N 439 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal AF3 AL F1 sing N N 1 AF3 AL F2 sing N N 2 AF3 AL F3 sing N N 3 ALA N CA sing N N 4 ALA N H sing N N 5 ALA N H2 sing N N 6 ALA CA C sing N N 7 ALA CA CB sing N N 8 ALA CA HA sing N N 9 ALA C O doub N N 10 ALA C OXT sing N N 11 ALA CB HB1 sing N N 12 ALA CB HB2 sing N N 13 ALA CB HB3 sing N N 14 ALA OXT HXT sing N N 15 ARG N CA sing N N 16 ARG N H sing N N 17 ARG N H2 sing N N 18 ARG CA C sing N N 19 ARG CA CB sing N N 20 ARG CA HA sing N N 21 ARG C O doub N N 22 ARG C OXT sing N N 23 ARG CB CG sing N N 24 ARG CB HB2 sing N N 25 ARG CB HB3 sing N N 26 ARG CG CD sing N N 27 ARG CG HG2 sing N N 28 ARG CG HG3 sing N N 29 ARG CD NE sing N N 30 ARG CD HD2 sing N N 31 ARG CD HD3 sing N N 32 ARG NE CZ sing N N 33 ARG NE HE sing N N 34 ARG CZ NH1 sing N N 35 ARG CZ NH2 doub N N 36 ARG NH1 HH11 sing N N 37 ARG NH1 HH12 sing N N 38 ARG NH2 HH21 sing N N 39 ARG NH2 HH22 sing N N 40 ARG OXT HXT sing N N 41 ASN N CA sing N N 42 ASN N H sing N N 43 ASN N H2 sing N N 44 ASN CA C sing N N 45 ASN CA CB sing N N 46 ASN CA HA sing N N 47 ASN C O doub N N 48 ASN C OXT sing N N 49 ASN CB CG sing N N 50 ASN CB HB2 sing N N 51 ASN CB HB3 sing N N 52 ASN CG OD1 doub N N 53 ASN CG ND2 sing N N 54 ASN ND2 HD21 sing N N 55 ASN ND2 HD22 sing N N 56 ASN OXT HXT sing N N 57 ASP N CA sing N N 58 ASP N H sing N N 59 ASP N H2 sing N N 60 ASP CA C sing N N 61 ASP CA CB sing N N 62 ASP CA HA sing N N 63 ASP C O doub N N 64 ASP C OXT sing N N 65 ASP CB CG sing N N 66 ASP CB HB2 sing N N 67 ASP CB HB3 sing N N 68 ASP CG OD1 doub N N 69 ASP CG OD2 sing N N 70 ASP OD2 HD2 sing N N 71 ASP OXT HXT sing N N 72 CYS N CA sing N N 73 CYS N H sing N N 74 CYS N H2 sing N N 75 CYS CA C sing N N 76 CYS CA CB sing N N 77 CYS CA HA sing N N 78 CYS C O doub N N 79 CYS C OXT sing N N 80 CYS CB SG sing N N 81 CYS CB HB2 sing N N 82 CYS CB HB3 sing N N 83 CYS SG HG sing N N 84 CYS OXT HXT sing N N 85 GDP PB O1B doub N N 86 GDP PB O2B sing N N 87 GDP PB O3B sing N N 88 GDP PB O3A sing N N 89 GDP O2B HOB2 sing N N 90 GDP O3B HOB3 sing N N 91 GDP O3A PA sing N N 92 GDP PA O1A doub N N 93 GDP PA O2A sing N N 94 GDP PA "O5'" sing N N 95 GDP O2A HOA2 sing N N 96 GDP "O5'" "C5'" sing N N 97 GDP "C5'" "C4'" sing N N 98 GDP "C5'" "H5'" sing N N 99 GDP "C5'" "H5''" sing N N 100 GDP "C4'" "O4'" sing N N 101 GDP "C4'" "C3'" sing N N 102 GDP "C4'" "H4'" sing N N 103 GDP "O4'" "C1'" sing N N 104 GDP "C3'" "O3'" sing N N 105 GDP "C3'" "C2'" sing N N 106 GDP "C3'" "H3'" sing N N 107 GDP "O3'" "HO3'" sing N N 108 GDP "C2'" "O2'" sing N N 109 GDP "C2'" "C1'" sing N N 110 GDP "C2'" "H2'" sing N N 111 GDP "O2'" "HO2'" sing N N 112 GDP "C1'" N9 sing N N 113 GDP "C1'" "H1'" sing N N 114 GDP N9 C8 sing Y N 115 GDP N9 C4 sing Y N 116 GDP C8 N7 doub Y N 117 GDP C8 H8 sing N N 118 GDP N7 C5 sing Y N 119 GDP C5 C6 sing N N 120 GDP C5 C4 doub Y N 121 GDP C6 O6 doub N N 122 GDP C6 N1 sing N N 123 GDP N1 C2 sing N N 124 GDP N1 HN1 sing N N 125 GDP C2 N2 sing N N 126 GDP C2 N3 doub N N 127 GDP N2 HN21 sing N N 128 GDP N2 HN22 sing N N 129 GDP N3 C4 sing N N 130 GLN N CA sing N N 131 GLN N H sing N N 132 GLN N H2 sing N N 133 GLN CA C sing N N 134 GLN CA CB sing N N 135 GLN CA HA sing N N 136 GLN C O doub N N 137 GLN C OXT sing N N 138 GLN CB CG sing N N 139 GLN CB HB2 sing N N 140 GLN CB HB3 sing N N 141 GLN CG CD sing N N 142 GLN CG HG2 sing N N 143 GLN CG HG3 sing N N 144 GLN CD OE1 doub N N 145 GLN CD NE2 sing N N 146 GLN NE2 HE21 sing N N 147 GLN NE2 HE22 sing N N 148 GLN OXT HXT sing N N 149 GLU N CA sing N N 150 GLU N H sing N N 151 GLU N H2 sing N N 152 GLU CA C sing N N 153 GLU CA CB sing N N 154 GLU CA HA sing N N 155 GLU C O doub N N 156 GLU C OXT sing N N 157 GLU CB CG sing N N 158 GLU CB HB2 sing N N 159 GLU CB HB3 sing N N 160 GLU CG CD sing N N 161 GLU CG HG2 sing N N 162 GLU CG HG3 sing N N 163 GLU CD OE1 doub N N 164 GLU CD OE2 sing N N 165 GLU OE2 HE2 sing N N 166 GLU OXT HXT sing N N 167 GLY N CA sing N N 168 GLY N H sing N N 169 GLY N H2 sing N N 170 GLY CA C sing N N 171 GLY CA HA2 sing N N 172 GLY CA HA3 sing N N 173 GLY C O doub N N 174 GLY C OXT sing N N 175 GLY OXT HXT sing N N 176 HIS N CA sing N N 177 HIS N H sing N N 178 HIS N H2 sing N N 179 HIS CA C sing N N 180 HIS CA CB sing N N 181 HIS CA HA sing N N 182 HIS C O doub N N 183 HIS C OXT sing N N 184 HIS CB CG sing N N 185 HIS CB HB2 sing N N 186 HIS CB HB3 sing N N 187 HIS CG ND1 sing Y N 188 HIS CG CD2 doub Y N 189 HIS ND1 CE1 doub Y N 190 HIS ND1 HD1 sing N N 191 HIS CD2 NE2 sing Y N 192 HIS CD2 HD2 sing N N 193 HIS CE1 NE2 sing Y N 194 HIS CE1 HE1 sing N N 195 HIS NE2 HE2 sing N N 196 HIS OXT HXT sing N N 197 HOH O H1 sing N N 198 HOH O H2 sing N N 199 ILE N CA sing N N 200 ILE N H sing N N 201 ILE N H2 sing N N 202 ILE CA C sing N N 203 ILE CA CB sing N N 204 ILE CA HA sing N N 205 ILE C O doub N N 206 ILE C OXT sing N N 207 ILE CB CG1 sing N N 208 ILE CB CG2 sing N N 209 ILE CB HB sing N N 210 ILE CG1 CD1 sing N N 211 ILE CG1 HG12 sing N N 212 ILE CG1 HG13 sing N N 213 ILE CG2 HG21 sing N N 214 ILE CG2 HG22 sing N N 215 ILE CG2 HG23 sing N N 216 ILE CD1 HD11 sing N N 217 ILE CD1 HD12 sing N N 218 ILE CD1 HD13 sing N N 219 ILE OXT HXT sing N N 220 LEU N CA sing N N 221 LEU N H sing N N 222 LEU N H2 sing N N 223 LEU CA C sing N N 224 LEU CA CB sing N N 225 LEU CA HA sing N N 226 LEU C O doub N N 227 LEU C OXT sing N N 228 LEU CB CG sing N N 229 LEU CB HB2 sing N N 230 LEU CB HB3 sing N N 231 LEU CG CD1 sing N N 232 LEU CG CD2 sing N N 233 LEU CG HG sing N N 234 LEU CD1 HD11 sing N N 235 LEU CD1 HD12 sing N N 236 LEU CD1 HD13 sing N N 237 LEU CD2 HD21 sing N N 238 LEU CD2 HD22 sing N N 239 LEU CD2 HD23 sing N N 240 LEU OXT HXT sing N N 241 LYS N CA sing N N 242 LYS N H sing N N 243 LYS N H2 sing N N 244 LYS CA C sing N N 245 LYS CA CB sing N N 246 LYS CA HA sing N N 247 LYS C O doub N N 248 LYS C OXT sing N N 249 LYS CB CG sing N N 250 LYS CB HB2 sing N N 251 LYS CB HB3 sing N N 252 LYS CG CD sing N N 253 LYS CG HG2 sing N N 254 LYS CG HG3 sing N N 255 LYS CD CE sing N N 256 LYS CD HD2 sing N N 257 LYS CD HD3 sing N N 258 LYS CE NZ sing N N 259 LYS CE HE2 sing N N 260 LYS CE HE3 sing N N 261 LYS NZ HZ1 sing N N 262 LYS NZ HZ2 sing N N 263 LYS NZ HZ3 sing N N 264 LYS OXT HXT sing N N 265 MET N CA sing N N 266 MET N H sing N N 267 MET N H2 sing N N 268 MET CA C sing N N 269 MET CA CB sing N N 270 MET CA HA sing N N 271 MET C O doub N N 272 MET C OXT sing N N 273 MET CB CG sing N N 274 MET CB HB2 sing N N 275 MET CB HB3 sing N N 276 MET CG SD sing N N 277 MET CG HG2 sing N N 278 MET CG HG3 sing N N 279 MET SD CE sing N N 280 MET CE HE1 sing N N 281 MET CE HE2 sing N N 282 MET CE HE3 sing N N 283 MET OXT HXT sing N N 284 PHE N CA sing N N 285 PHE N H sing N N 286 PHE N H2 sing N N 287 PHE CA C sing N N 288 PHE CA CB sing N N 289 PHE CA HA sing N N 290 PHE C O doub N N 291 PHE C OXT sing N N 292 PHE CB CG sing N N 293 PHE CB HB2 sing N N 294 PHE CB HB3 sing N N 295 PHE CG CD1 doub Y N 296 PHE CG CD2 sing Y N 297 PHE CD1 CE1 sing Y N 298 PHE CD1 HD1 sing N N 299 PHE CD2 CE2 doub Y N 300 PHE CD2 HD2 sing N N 301 PHE CE1 CZ doub Y N 302 PHE CE1 HE1 sing N N 303 PHE CE2 CZ sing Y N 304 PHE CE2 HE2 sing N N 305 PHE CZ HZ sing N N 306 PHE OXT HXT sing N N 307 PRO N CA sing N N 308 PRO N CD sing N N 309 PRO N H sing N N 310 PRO CA C sing N N 311 PRO CA CB sing N N 312 PRO CA HA sing N N 313 PRO C O doub N N 314 PRO C OXT sing N N 315 PRO CB CG sing N N 316 PRO CB HB2 sing N N 317 PRO CB HB3 sing N N 318 PRO CG CD sing N N 319 PRO CG HG2 sing N N 320 PRO CG HG3 sing N N 321 PRO CD HD2 sing N N 322 PRO CD HD3 sing N N 323 PRO OXT HXT sing N N 324 SER N CA sing N N 325 SER N H sing N N 326 SER N H2 sing N N 327 SER CA C sing N N 328 SER CA CB sing N N 329 SER CA HA sing N N 330 SER C O doub N N 331 SER C OXT sing N N 332 SER CB OG sing N N 333 SER CB HB2 sing N N 334 SER CB HB3 sing N N 335 SER OG HG sing N N 336 SER OXT HXT sing N N 337 THR N CA sing N N 338 THR N H sing N N 339 THR N H2 sing N N 340 THR CA C sing N N 341 THR CA CB sing N N 342 THR CA HA sing N N 343 THR C O doub N N 344 THR C OXT sing N N 345 THR CB OG1 sing N N 346 THR CB CG2 sing N N 347 THR CB HB sing N N 348 THR OG1 HG1 sing N N 349 THR CG2 HG21 sing N N 350 THR CG2 HG22 sing N N 351 THR CG2 HG23 sing N N 352 THR OXT HXT sing N N 353 TRP N CA sing N N 354 TRP N H sing N N 355 TRP N H2 sing N N 356 TRP CA C sing N N 357 TRP CA CB sing N N 358 TRP CA HA sing N N 359 TRP C O doub N N 360 TRP C OXT sing N N 361 TRP CB CG sing N N 362 TRP CB HB2 sing N N 363 TRP CB HB3 sing N N 364 TRP CG CD1 doub Y N 365 TRP CG CD2 sing Y N 366 TRP CD1 NE1 sing Y N 367 TRP CD1 HD1 sing N N 368 TRP CD2 CE2 doub Y N 369 TRP CD2 CE3 sing Y N 370 TRP NE1 CE2 sing Y N 371 TRP NE1 HE1 sing N N 372 TRP CE2 CZ2 sing Y N 373 TRP CE3 CZ3 doub Y N 374 TRP CE3 HE3 sing N N 375 TRP CZ2 CH2 doub Y N 376 TRP CZ2 HZ2 sing N N 377 TRP CZ3 CH2 sing Y N 378 TRP CZ3 HZ3 sing N N 379 TRP CH2 HH2 sing N N 380 TRP OXT HXT sing N N 381 TYR N CA sing N N 382 TYR N H sing N N 383 TYR N H2 sing N N 384 TYR CA C sing N N 385 TYR CA CB sing N N 386 TYR CA HA sing N N 387 TYR C O doub N N 388 TYR C OXT sing N N 389 TYR CB CG sing N N 390 TYR CB HB2 sing N N 391 TYR CB HB3 sing N N 392 TYR CG CD1 doub Y N 393 TYR CG CD2 sing Y N 394 TYR CD1 CE1 sing Y N 395 TYR CD1 HD1 sing N N 396 TYR CD2 CE2 doub Y N 397 TYR CD2 HD2 sing N N 398 TYR CE1 CZ doub Y N 399 TYR CE1 HE1 sing N N 400 TYR CE2 CZ sing Y N 401 TYR CE2 HE2 sing N N 402 TYR CZ OH sing N N 403 TYR OH HH sing N N 404 TYR OXT HXT sing N N 405 VAL N CA sing N N 406 VAL N H sing N N 407 VAL N H2 sing N N 408 VAL CA C sing N N 409 VAL CA CB sing N N 410 VAL CA HA sing N N 411 VAL C O doub N N 412 VAL C OXT sing N N 413 VAL CB CG1 sing N N 414 VAL CB CG2 sing N N 415 VAL CB HB sing N N 416 VAL CG1 HG11 sing N N 417 VAL CG1 HG12 sing N N 418 VAL CG1 HG13 sing N N 419 VAL CG2 HG21 sing N N 420 VAL CG2 HG22 sing N N 421 VAL CG2 HG23 sing N N 422 VAL OXT HXT sing N N 423 # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.details 1 ? 'experimental model' PDB 2B0O 'PDB ENTRIES 2B0o and 2J5X' 2 ? 'experimental model' PDB 2J5X 'PDB ENTRIES 2B0o and 2J5X' # _atom_sites.entry_id 3LVQ _atom_sites.fract_transf_matrix[1][1] 0.006836 _atom_sites.fract_transf_matrix[1][2] 0.003947 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007893 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020194 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol AL C F MG N O P S ZN # loop_