data_3LWD # _entry.id 3LWD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3LWD pdb_00003lwd 10.2210/pdb3lwd/pdb RCSB RCSB057812 ? ? WWPDB D_1000057812 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 402861 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3LWD _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-02-23 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Crystal structure of Putative 6-phosphogluconolactonase (YP_574786.1) from Chromohalobacter salexigens DSM 3043 at 1.88 A resolution ; _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3LWD _cell.length_a 60.647 _cell.length_b 60.647 _cell.length_c 133.089 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3LWD _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 6-phosphogluconolactonase 24170.734 1 3.1.1.31 ? ? ? 2 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 3 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 4 water nat water 18.015 248 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)(MSE)NTTQEGRQRLAERLADTVAQALEADLAKRERALLVVSGGSTPKPFFTSLAAKALPWARVDVTLADERWV TADDADSNARLVRETLLVGPAAEACFHPLTTDDDTPEAGVETVAERLESLPWPASAVILG(MSE)GGDGHTASLFPDSEQ LATALETTSAAVVVHAPSVPQARITLSASRLADAGLHVLHITGNDKRRVLAEALAGDDVRQLPIRAFLSQPIATYWAP ; _entity_poly.pdbx_seq_one_letter_code_can ;GMMNTTQEGRQRLAERLADTVAQALEADLAKRERALLVVSGGSTPKPFFTSLAAKALPWARVDVTLADERWVTADDADSN ARLVRETLLVGPAAEACFHPLTTDDDTPEAGVETVAERLESLPWPASAVILGMGGDGHTASLFPDSEQLATALETTSAAV VVHAPSVPQARITLSASRLADAGLHVLHITGNDKRRVLAEALAGDDVRQLPIRAFLSQPIATYWAP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 402861 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 MSE n 1 4 ASN n 1 5 THR n 1 6 THR n 1 7 GLN n 1 8 GLU n 1 9 GLY n 1 10 ARG n 1 11 GLN n 1 12 ARG n 1 13 LEU n 1 14 ALA n 1 15 GLU n 1 16 ARG n 1 17 LEU n 1 18 ALA n 1 19 ASP n 1 20 THR n 1 21 VAL n 1 22 ALA n 1 23 GLN n 1 24 ALA n 1 25 LEU n 1 26 GLU n 1 27 ALA n 1 28 ASP n 1 29 LEU n 1 30 ALA n 1 31 LYS n 1 32 ARG n 1 33 GLU n 1 34 ARG n 1 35 ALA n 1 36 LEU n 1 37 LEU n 1 38 VAL n 1 39 VAL n 1 40 SER n 1 41 GLY n 1 42 GLY n 1 43 SER n 1 44 THR n 1 45 PRO n 1 46 LYS n 1 47 PRO n 1 48 PHE n 1 49 PHE n 1 50 THR n 1 51 SER n 1 52 LEU n 1 53 ALA n 1 54 ALA n 1 55 LYS n 1 56 ALA n 1 57 LEU n 1 58 PRO n 1 59 TRP n 1 60 ALA n 1 61 ARG n 1 62 VAL n 1 63 ASP n 1 64 VAL n 1 65 THR n 1 66 LEU n 1 67 ALA n 1 68 ASP n 1 69 GLU n 1 70 ARG n 1 71 TRP n 1 72 VAL n 1 73 THR n 1 74 ALA n 1 75 ASP n 1 76 ASP n 1 77 ALA n 1 78 ASP n 1 79 SER n 1 80 ASN n 1 81 ALA n 1 82 ARG n 1 83 LEU n 1 84 VAL n 1 85 ARG n 1 86 GLU n 1 87 THR n 1 88 LEU n 1 89 LEU n 1 90 VAL n 1 91 GLY n 1 92 PRO n 1 93 ALA n 1 94 ALA n 1 95 GLU n 1 96 ALA n 1 97 CYS n 1 98 PHE n 1 99 HIS n 1 100 PRO n 1 101 LEU n 1 102 THR n 1 103 THR n 1 104 ASP n 1 105 ASP n 1 106 ASP n 1 107 THR n 1 108 PRO n 1 109 GLU n 1 110 ALA n 1 111 GLY n 1 112 VAL n 1 113 GLU n 1 114 THR n 1 115 VAL n 1 116 ALA n 1 117 GLU n 1 118 ARG n 1 119 LEU n 1 120 GLU n 1 121 SER n 1 122 LEU n 1 123 PRO n 1 124 TRP n 1 125 PRO n 1 126 ALA n 1 127 SER n 1 128 ALA n 1 129 VAL n 1 130 ILE n 1 131 LEU n 1 132 GLY n 1 133 MSE n 1 134 GLY n 1 135 GLY n 1 136 ASP n 1 137 GLY n 1 138 HIS n 1 139 THR n 1 140 ALA n 1 141 SER n 1 142 LEU n 1 143 PHE n 1 144 PRO n 1 145 ASP n 1 146 SER n 1 147 GLU n 1 148 GLN n 1 149 LEU n 1 150 ALA n 1 151 THR n 1 152 ALA n 1 153 LEU n 1 154 GLU n 1 155 THR n 1 156 THR n 1 157 SER n 1 158 ALA n 1 159 ALA n 1 160 VAL n 1 161 VAL n 1 162 VAL n 1 163 HIS n 1 164 ALA n 1 165 PRO n 1 166 SER n 1 167 VAL n 1 168 PRO n 1 169 GLN n 1 170 ALA n 1 171 ARG n 1 172 ILE n 1 173 THR n 1 174 LEU n 1 175 SER n 1 176 ALA n 1 177 SER n 1 178 ARG n 1 179 LEU n 1 180 ALA n 1 181 ASP n 1 182 ALA n 1 183 GLY n 1 184 LEU n 1 185 HIS n 1 186 VAL n 1 187 LEU n 1 188 HIS n 1 189 ILE n 1 190 THR n 1 191 GLY n 1 192 ASN n 1 193 ASP n 1 194 LYS n 1 195 ARG n 1 196 ARG n 1 197 VAL n 1 198 LEU n 1 199 ALA n 1 200 GLU n 1 201 ALA n 1 202 LEU n 1 203 ALA n 1 204 GLY n 1 205 ASP n 1 206 ASP n 1 207 VAL n 1 208 ARG n 1 209 GLN n 1 210 LEU n 1 211 PRO n 1 212 ILE n 1 213 ARG n 1 214 ALA n 1 215 PHE n 1 216 LEU n 1 217 SER n 1 218 GLN n 1 219 PRO n 1 220 ILE n 1 221 ALA n 1 222 THR n 1 223 TYR n 1 224 TRP n 1 225 ALA n 1 226 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Csal_2740 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'DSM 3043 / ATCC BAA-138 / NCIMB 13768' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Chromohalobacter salexigens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 290398 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q1QTX1_CHRSD _struct_ref.pdbx_db_accession Q1QTX1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MMNTTQEGRQRLAERLADTVAQALEADLAKRERALLVVSGGSTPKPFFTSLAAKALPWARVDVTLADERWVTADDADSNA RLVRETLLVGPAAEACFHPLTTDDDTPEAGVETVAERLESLPWPASAVILGMGGDGHTASLFPDSEQLATALETTSAAVV VHAPSVPQARITLSASRLADAGLHVLHITGNDKRRVLAEALAGDDVRQLPIRAFLSQPIATYWAP ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3LWD _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 226 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q1QTX1 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 225 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 225 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3LWD _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q1QTX1 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3LWD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.92 _exptl_crystal.density_percent_sol 57.92 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '10.0000% iso-Propanol, 20.0000% PEG-4000, 0.1M HEPES pH 7.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.pdbx_collection_date 2009-12-03 _diffrn_detector.details 'Flat mirror (vertical focusing)' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97937 1.0 3 0.97898 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.91837,0.97937,0.97898 # _reflns.entry_id 3LWD _reflns.observed_criterion_sigma_I -3.00 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 48.840 _reflns.d_resolution_high 1.75 _reflns.number_obs 65927 _reflns.number_all ? _reflns.percent_possible_obs 96.300 _reflns.pdbx_Rmerge_I_obs 0.045 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 14.490 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.75 1.95 87.80 0.464 ? 2.4 ? ? ? ? ? ? ? 1 1 1.95 2.03 96.60 0.323 ? 3.4 ? ? ? ? ? ? ? 2 1 2.03 2.12 96.80 0.229 ? 4.7 ? ? ? ? ? ? ? 3 1 2.12 2.23 97.00 0.162 ? 6.4 ? ? ? ? ? ? ? 4 1 2.23 2.37 97.20 0.122 ? 8.2 ? ? ? ? ? ? ? 5 1 2.37 2.55 97.30 0.097 ? 9.9 ? ? ? ? ? ? ? 6 1 2.55 2.81 97.60 0.063 ? 14.2 ? ? ? ? ? ? ? 7 1 2.81 3.21 97.80 0.039 ? 21.1 ? ? ? ? ? ? ? 8 1 3.21 4.04 97.90 0.024 ? 32.0 ? ? ? ? ? ? ? 9 1 4.04 48.840 97.60 0.019 ? 40.0 ? ? ? ? ? ? ? 10 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3LWD _refine.ls_number_reflns_obs 27822 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 48.86 _refine.ls_d_res_high 1.75 _refine.ls_percent_reflns_obs 99.77 _refine.ls_R_factor_obs 0.15965 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.15828 _refine.ls_R_factor_R_free 0.18628 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1488 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 0.33 _refine.occupancy_max 1.00 _refine.correlation_coeff_Fo_to_Fc 0.972 _refine.correlation_coeff_Fo_to_Fc_free 0.961 _refine.B_iso_mean 11.630 _refine.aniso_B[1][1] 1.64 _refine.aniso_B[2][2] 1.64 _refine.aniso_B[3][3] -2.46 _refine.aniso_B[1][2] 0.82 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;1.HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2.ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. 3.A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4.A SODIUM ION(NA) AND GLYCEROL (GOL) FROM CRYSTALLIZATION/CRYOPROTECTATION ARE MODELED INTO THE STRUCTURE. ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.091 _refine.pdbx_overall_ESU_R_Free 0.090 _refine.overall_SU_ML 0.066 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 4.813 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1669 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 13 _refine_hist.number_atoms_solvent 248 _refine_hist.number_atoms_total 1930 _refine_hist.d_res_high 1.75 _refine_hist.d_res_low 48.86 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.016 0.022 ? 1846 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 1240 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.154 1.973 ? 2554 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.777 3.000 ? 3045 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.445 5.000 ? 264 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 32.058 23.529 ? 85 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 12.630 15.000 ? 295 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 18.824 15.000 ? 20 'X-RAY DIFFRACTION' ? r_chiral_restr 0.083 0.200 ? 303 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.021 ? 2132 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 368 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.658 1.500 ? 1180 'X-RAY DIFFRACTION' ? r_mcbond_other 0.206 1.500 ? 464 'X-RAY DIFFRACTION' ? r_mcangle_it 1.183 2.000 ? 1921 'X-RAY DIFFRACTION' ? r_scbond_it 1.968 3.000 ? 666 'X-RAY DIFFRACTION' ? r_scangle_it 3.195 4.500 ? 612 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.750 _refine_ls_shell.d_res_low 1.795 _refine_ls_shell.number_reflns_R_work 1996 _refine_ls_shell.R_factor_R_work 0.275 _refine_ls_shell.percent_reflns_obs 99.57 _refine_ls_shell.R_factor_R_free 0.314 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 104 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3LWD _struct.title ;Crystal structure of Putative 6-phosphogluconolactonase (YP_574786.1) from Chromohalobacter salexigens DSM 3043 at 1.88 A resolution ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;Putative 6-phosphogluconolactonase, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, Hydrolase ; _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.entry_id 3LWD # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 4 ? ALA A 30 ? ASN A 3 ALA A 29 1 ? 27 HELX_P HELX_P2 2 PRO A 45 ? ALA A 54 ? PRO A 44 ALA A 53 1 ? 10 HELX_P HELX_P3 3 PRO A 58 ? ALA A 60 ? PRO A 57 ALA A 59 5 ? 3 HELX_P HELX_P4 4 SER A 79 ? LEU A 88 ? SER A 78 LEU A 87 1 ? 10 HELX_P HELX_P5 5 VAL A 90 ? ALA A 96 ? VAL A 89 ALA A 95 5 ? 7 HELX_P HELX_P6 6 THR A 107 ? SER A 121 ? THR A 106 SER A 120 1 ? 15 HELX_P HELX_P7 7 GLN A 148 ? THR A 155 ? GLN A 147 THR A 154 1 ? 8 HELX_P HELX_P8 8 SER A 175 ? ALA A 180 ? SER A 174 ALA A 179 1 ? 6 HELX_P HELX_P9 9 GLY A 191 ? GLY A 204 ? GLY A 190 GLY A 203 1 ? 14 HELX_P HELX_P10 10 ILE A 212 ? SER A 217 ? ILE A 211 SER A 216 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLY 132 C ? ? ? 1_555 A MSE 133 N ? ? A GLY 131 A MSE 132 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale2 covale both ? A MSE 133 C ? ? ? 1_555 A GLY 134 N ? ? A MSE 132 A GLY 133 1_555 ? ? ? ? ? ? ? 1.321 ? ? metalc1 metalc ? ? A ALA 164 O ? ? ? 1_555 D NA . NA ? ? A ALA 163 A NA 228 1_555 ? ? ? ? ? ? ? 2.367 ? ? metalc2 metalc ? ? A VAL 167 O ? ? ? 1_555 D NA . NA ? ? A VAL 166 A NA 228 1_555 ? ? ? ? ? ? ? 2.231 ? ? metalc3 metalc ? ? D NA . NA ? ? ? 1_555 E HOH . O ? ? A NA 228 A HOH 288 1_555 ? ? ? ? ? ? ? 2.609 ? ? metalc4 metalc ? ? D NA . NA ? ? ? 1_555 E HOH . O ? ? A NA 228 A HOH 335 1_555 ? ? ? ? ? ? ? 2.386 ? ? metalc5 metalc ? ? D NA . NA ? ? ? 1_555 E HOH . O ? ? A NA 228 A HOH 374 1_555 ? ? ? ? ? ? ? 2.339 ? ? metalc6 metalc ? ? D NA . NA ? ? ? 1_555 E HOH . O ? ? A NA 228 A HOH 377 1_555 ? ? ? ? ? ? ? 2.659 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id TRP _struct_mon_prot_cis.label_seq_id 124 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id TRP _struct_mon_prot_cis.auth_seq_id 123 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 125 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 124 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.36 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 CYS A 97 ? HIS A 99 ? CYS A 96 HIS A 98 A 2 VAL A 62 ? LEU A 66 ? VAL A 61 LEU A 65 A 3 ALA A 35 ? VAL A 39 ? ALA A 34 VAL A 38 A 4 ALA A 128 ? LEU A 131 ? ALA A 127 LEU A 130 A 5 HIS A 185 ? THR A 190 ? HIS A 184 THR A 189 A 6 ALA A 221 ? ALA A 225 ? ALA A 220 ALA A 224 B 1 ASP A 68 ? ARG A 70 ? ASP A 67 ARG A 69 B 2 ARG A 171 ? LEU A 174 ? ARG A 170 LEU A 173 B 3 ALA A 159 ? VAL A 162 ? ALA A 158 VAL A 161 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O CYS A 97 ? O CYS A 96 N VAL A 64 ? N VAL A 63 A 2 3 O ASP A 63 ? O ASP A 62 N ALA A 35 ? N ALA A 34 A 3 4 N VAL A 38 ? N VAL A 37 O ILE A 130 ? O ILE A 129 A 4 5 N LEU A 131 ? N LEU A 130 O VAL A 186 ? O VAL A 185 A 5 6 N LEU A 187 ? N LEU A 186 O TYR A 223 ? O TYR A 222 B 1 2 N GLU A 69 ? N GLU A 68 O ILE A 172 ? O ILE A 171 B 2 3 O THR A 173 ? O THR A 172 N VAL A 160 ? N VAL A 159 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GOL 226 ? 2 'BINDING SITE FOR RESIDUE GOL A 226' AC2 Software A GOL 227 ? 7 'BINDING SITE FOR RESIDUE GOL A 227' AC3 Software A NA 228 ? 6 'BINDING SITE FOR RESIDUE NA A 228' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 ASP A 181 ? ASP A 180 . ? 1_555 ? 2 AC1 2 ALA A 182 ? ALA A 181 . ? 1_555 ? 3 AC2 7 TRP A 71 ? TRP A 70 . ? 1_555 ? 4 AC2 7 VAL A 72 ? VAL A 71 . ? 1_555 ? 5 AC2 7 THR A 102 ? THR A 101 . ? 1_555 ? 6 AC2 7 THR A 103 ? THR A 102 . ? 1_555 ? 7 AC2 7 ASP A 104 ? ASP A 103 . ? 1_555 ? 8 AC2 7 ASP A 105 ? ASP A 104 . ? 1_555 ? 9 AC2 7 HOH E . ? HOH A 245 . ? 1_555 ? 10 AC3 6 ALA A 164 ? ALA A 163 . ? 1_555 ? 11 AC3 6 VAL A 167 ? VAL A 166 . ? 1_555 ? 12 AC3 6 HOH E . ? HOH A 288 . ? 1_555 ? 13 AC3 6 HOH E . ? HOH A 335 . ? 1_555 ? 14 AC3 6 HOH E . ? HOH A 374 . ? 1_555 ? 15 AC3 6 HOH E . ? HOH A 377 . ? 1_555 ? # _atom_sites.entry_id 3LWD _atom_sites.fract_transf_matrix[1][1] 0.016489 _atom_sites.fract_transf_matrix[1][2] 0.009520 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019040 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007514 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 ? ? ? A . n A 1 3 MSE 3 2 ? ? ? A . n A 1 4 ASN 4 3 3 ASN ASN A . n A 1 5 THR 5 4 4 THR THR A . n A 1 6 THR 6 5 5 THR THR A . n A 1 7 GLN 7 6 6 GLN GLN A . n A 1 8 GLU 8 7 7 GLU GLU A . n A 1 9 GLY 9 8 8 GLY GLY A . n A 1 10 ARG 10 9 9 ARG ARG A . n A 1 11 GLN 11 10 10 GLN GLN A . n A 1 12 ARG 12 11 11 ARG ARG A . n A 1 13 LEU 13 12 12 LEU LEU A . n A 1 14 ALA 14 13 13 ALA ALA A . n A 1 15 GLU 15 14 14 GLU GLU A . n A 1 16 ARG 16 15 15 ARG ARG A . n A 1 17 LEU 17 16 16 LEU LEU A . n A 1 18 ALA 18 17 17 ALA ALA A . n A 1 19 ASP 19 18 18 ASP ASP A . n A 1 20 THR 20 19 19 THR THR A . n A 1 21 VAL 21 20 20 VAL VAL A . n A 1 22 ALA 22 21 21 ALA ALA A . n A 1 23 GLN 23 22 22 GLN GLN A . n A 1 24 ALA 24 23 23 ALA ALA A . n A 1 25 LEU 25 24 24 LEU LEU A . n A 1 26 GLU 26 25 25 GLU GLU A . n A 1 27 ALA 27 26 26 ALA ALA A . n A 1 28 ASP 28 27 27 ASP ASP A . n A 1 29 LEU 29 28 28 LEU LEU A . n A 1 30 ALA 30 29 29 ALA ALA A . n A 1 31 LYS 31 30 30 LYS LYS A . n A 1 32 ARG 32 31 31 ARG ARG A . n A 1 33 GLU 33 32 32 GLU GLU A . n A 1 34 ARG 34 33 33 ARG ARG A . n A 1 35 ALA 35 34 34 ALA ALA A . n A 1 36 LEU 36 35 35 LEU LEU A . n A 1 37 LEU 37 36 36 LEU LEU A . n A 1 38 VAL 38 37 37 VAL VAL A . n A 1 39 VAL 39 38 38 VAL VAL A . n A 1 40 SER 40 39 39 SER SER A . n A 1 41 GLY 41 40 40 GLY GLY A . n A 1 42 GLY 42 41 41 GLY GLY A . n A 1 43 SER 43 42 42 SER SER A . n A 1 44 THR 44 43 43 THR THR A . n A 1 45 PRO 45 44 44 PRO PRO A . n A 1 46 LYS 46 45 45 LYS LYS A . n A 1 47 PRO 47 46 46 PRO PRO A . n A 1 48 PHE 48 47 47 PHE PHE A . n A 1 49 PHE 49 48 48 PHE PHE A . n A 1 50 THR 50 49 49 THR THR A . n A 1 51 SER 51 50 50 SER SER A . n A 1 52 LEU 52 51 51 LEU LEU A . n A 1 53 ALA 53 52 52 ALA ALA A . n A 1 54 ALA 54 53 53 ALA ALA A . n A 1 55 LYS 55 54 54 LYS LYS A . n A 1 56 ALA 56 55 55 ALA ALA A . n A 1 57 LEU 57 56 56 LEU LEU A . n A 1 58 PRO 58 57 57 PRO PRO A . n A 1 59 TRP 59 58 58 TRP TRP A . n A 1 60 ALA 60 59 59 ALA ALA A . n A 1 61 ARG 61 60 60 ARG ARG A . n A 1 62 VAL 62 61 61 VAL VAL A . n A 1 63 ASP 63 62 62 ASP ASP A . n A 1 64 VAL 64 63 63 VAL VAL A . n A 1 65 THR 65 64 64 THR THR A . n A 1 66 LEU 66 65 65 LEU LEU A . n A 1 67 ALA 67 66 66 ALA ALA A . n A 1 68 ASP 68 67 67 ASP ASP A . n A 1 69 GLU 69 68 68 GLU GLU A . n A 1 70 ARG 70 69 69 ARG ARG A . n A 1 71 TRP 71 70 70 TRP TRP A . n A 1 72 VAL 72 71 71 VAL VAL A . n A 1 73 THR 73 72 72 THR THR A . n A 1 74 ALA 74 73 73 ALA ALA A . n A 1 75 ASP 75 74 74 ASP ASP A . n A 1 76 ASP 76 75 75 ASP ASP A . n A 1 77 ALA 77 76 76 ALA ALA A . n A 1 78 ASP 78 77 77 ASP ASP A . n A 1 79 SER 79 78 78 SER SER A . n A 1 80 ASN 80 79 79 ASN ASN A . n A 1 81 ALA 81 80 80 ALA ALA A . n A 1 82 ARG 82 81 81 ARG ARG A . n A 1 83 LEU 83 82 82 LEU LEU A . n A 1 84 VAL 84 83 83 VAL VAL A . n A 1 85 ARG 85 84 84 ARG ARG A . n A 1 86 GLU 86 85 85 GLU GLU A . n A 1 87 THR 87 86 86 THR THR A . n A 1 88 LEU 88 87 87 LEU LEU A . n A 1 89 LEU 89 88 88 LEU LEU A . n A 1 90 VAL 90 89 89 VAL VAL A . n A 1 91 GLY 91 90 90 GLY GLY A . n A 1 92 PRO 92 91 91 PRO PRO A . n A 1 93 ALA 93 92 92 ALA ALA A . n A 1 94 ALA 94 93 93 ALA ALA A . n A 1 95 GLU 95 94 94 GLU GLU A . n A 1 96 ALA 96 95 95 ALA ALA A . n A 1 97 CYS 97 96 96 CYS CYS A . n A 1 98 PHE 98 97 97 PHE PHE A . n A 1 99 HIS 99 98 98 HIS HIS A . n A 1 100 PRO 100 99 99 PRO PRO A . n A 1 101 LEU 101 100 100 LEU LEU A . n A 1 102 THR 102 101 101 THR THR A . n A 1 103 THR 103 102 102 THR THR A . n A 1 104 ASP 104 103 103 ASP ASP A . n A 1 105 ASP 105 104 104 ASP ASP A . n A 1 106 ASP 106 105 105 ASP ASP A . n A 1 107 THR 107 106 106 THR THR A . n A 1 108 PRO 108 107 107 PRO PRO A . n A 1 109 GLU 109 108 108 GLU GLU A . n A 1 110 ALA 110 109 109 ALA ALA A . n A 1 111 GLY 111 110 110 GLY GLY A . n A 1 112 VAL 112 111 111 VAL VAL A . n A 1 113 GLU 113 112 112 GLU GLU A . n A 1 114 THR 114 113 113 THR THR A . n A 1 115 VAL 115 114 114 VAL VAL A . n A 1 116 ALA 116 115 115 ALA ALA A . n A 1 117 GLU 117 116 116 GLU GLU A . n A 1 118 ARG 118 117 117 ARG ARG A . n A 1 119 LEU 119 118 118 LEU LEU A . n A 1 120 GLU 120 119 119 GLU GLU A . n A 1 121 SER 121 120 120 SER SER A . n A 1 122 LEU 122 121 121 LEU LEU A . n A 1 123 PRO 123 122 122 PRO PRO A . n A 1 124 TRP 124 123 123 TRP TRP A . n A 1 125 PRO 125 124 124 PRO PRO A . n A 1 126 ALA 126 125 125 ALA ALA A . n A 1 127 SER 127 126 126 SER SER A . n A 1 128 ALA 128 127 127 ALA ALA A . n A 1 129 VAL 129 128 128 VAL VAL A . n A 1 130 ILE 130 129 129 ILE ILE A . n A 1 131 LEU 131 130 130 LEU LEU A . n A 1 132 GLY 132 131 131 GLY GLY A . n A 1 133 MSE 133 132 132 MSE MSE A . n A 1 134 GLY 134 133 133 GLY GLY A . n A 1 135 GLY 135 134 134 GLY GLY A . n A 1 136 ASP 136 135 135 ASP ASP A . n A 1 137 GLY 137 136 136 GLY GLY A . n A 1 138 HIS 138 137 137 HIS HIS A . n A 1 139 THR 139 138 138 THR THR A . n A 1 140 ALA 140 139 139 ALA ALA A . n A 1 141 SER 141 140 140 SER SER A . n A 1 142 LEU 142 141 141 LEU LEU A . n A 1 143 PHE 143 142 142 PHE PHE A . n A 1 144 PRO 144 143 143 PRO PRO A . n A 1 145 ASP 145 144 144 ASP ASP A . n A 1 146 SER 146 145 145 SER SER A . n A 1 147 GLU 147 146 146 GLU GLU A . n A 1 148 GLN 148 147 147 GLN GLN A . n A 1 149 LEU 149 148 148 LEU LEU A . n A 1 150 ALA 150 149 149 ALA ALA A . n A 1 151 THR 151 150 150 THR THR A . n A 1 152 ALA 152 151 151 ALA ALA A . n A 1 153 LEU 153 152 152 LEU LEU A . n A 1 154 GLU 154 153 153 GLU GLU A . n A 1 155 THR 155 154 154 THR THR A . n A 1 156 THR 156 155 155 THR THR A . n A 1 157 SER 157 156 156 SER SER A . n A 1 158 ALA 158 157 157 ALA ALA A . n A 1 159 ALA 159 158 158 ALA ALA A . n A 1 160 VAL 160 159 159 VAL VAL A . n A 1 161 VAL 161 160 160 VAL VAL A . n A 1 162 VAL 162 161 161 VAL VAL A . n A 1 163 HIS 163 162 162 HIS HIS A . n A 1 164 ALA 164 163 163 ALA ALA A . n A 1 165 PRO 165 164 164 PRO PRO A . n A 1 166 SER 166 165 165 SER SER A . n A 1 167 VAL 167 166 166 VAL VAL A . n A 1 168 PRO 168 167 167 PRO PRO A . n A 1 169 GLN 169 168 168 GLN GLN A . n A 1 170 ALA 170 169 169 ALA ALA A . n A 1 171 ARG 171 170 170 ARG ARG A . n A 1 172 ILE 172 171 171 ILE ILE A . n A 1 173 THR 173 172 172 THR THR A . n A 1 174 LEU 174 173 173 LEU LEU A . n A 1 175 SER 175 174 174 SER SER A . n A 1 176 ALA 176 175 175 ALA ALA A . n A 1 177 SER 177 176 176 SER SER A . n A 1 178 ARG 178 177 177 ARG ARG A . n A 1 179 LEU 179 178 178 LEU LEU A . n A 1 180 ALA 180 179 179 ALA ALA A . n A 1 181 ASP 181 180 180 ASP ASP A . n A 1 182 ALA 182 181 181 ALA ALA A . n A 1 183 GLY 183 182 182 GLY GLY A . n A 1 184 LEU 184 183 183 LEU LEU A . n A 1 185 HIS 185 184 184 HIS HIS A . n A 1 186 VAL 186 185 185 VAL VAL A . n A 1 187 LEU 187 186 186 LEU LEU A . n A 1 188 HIS 188 187 187 HIS HIS A . n A 1 189 ILE 189 188 188 ILE ILE A . n A 1 190 THR 190 189 189 THR THR A . n A 1 191 GLY 191 190 190 GLY GLY A . n A 1 192 ASN 192 191 191 ASN ASN A . n A 1 193 ASP 193 192 192 ASP ASP A . n A 1 194 LYS 194 193 193 LYS LYS A . n A 1 195 ARG 195 194 194 ARG ARG A . n A 1 196 ARG 196 195 195 ARG ARG A . n A 1 197 VAL 197 196 196 VAL VAL A . n A 1 198 LEU 198 197 197 LEU LEU A . n A 1 199 ALA 199 198 198 ALA ALA A . n A 1 200 GLU 200 199 199 GLU GLU A . n A 1 201 ALA 201 200 200 ALA ALA A . n A 1 202 LEU 202 201 201 LEU LEU A . n A 1 203 ALA 203 202 202 ALA ALA A . n A 1 204 GLY 204 203 203 GLY GLY A . n A 1 205 ASP 205 204 204 ASP ASP A . n A 1 206 ASP 206 205 205 ASP ASP A . n A 1 207 VAL 207 206 206 VAL VAL A . n A 1 208 ARG 208 207 207 ARG ARG A . n A 1 209 GLN 209 208 208 GLN GLN A . n A 1 210 LEU 210 209 209 LEU LEU A . n A 1 211 PRO 211 210 210 PRO PRO A . n A 1 212 ILE 212 211 211 ILE ILE A . n A 1 213 ARG 213 212 212 ARG ARG A . n A 1 214 ALA 214 213 213 ALA ALA A . n A 1 215 PHE 215 214 214 PHE PHE A . n A 1 216 LEU 216 215 215 LEU LEU A . n A 1 217 SER 217 216 216 SER SER A . n A 1 218 GLN 218 217 217 GLN GLN A . n A 1 219 PRO 219 218 218 PRO PRO A . n A 1 220 ILE 220 219 219 ILE ILE A . n A 1 221 ALA 221 220 220 ALA ALA A . n A 1 222 THR 222 221 221 THR THR A . n A 1 223 TYR 223 222 222 TYR TYR A . n A 1 224 TRP 224 223 223 TRP TRP A . n A 1 225 ALA 225 224 224 ALA ALA A . n A 1 226 PRO 226 225 225 PRO PRO A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL 1 226 1 GOL GOL A . C 2 GOL 1 227 2 GOL GOL A . D 3 NA 1 228 3 NA NA A . E 4 HOH 1 229 229 HOH HOH A . E 4 HOH 2 230 230 HOH HOH A . E 4 HOH 3 231 231 HOH HOH A . E 4 HOH 4 232 232 HOH HOH A . E 4 HOH 5 233 233 HOH HOH A . E 4 HOH 6 234 234 HOH HOH A . E 4 HOH 7 235 235 HOH HOH A . E 4 HOH 8 236 236 HOH HOH A . E 4 HOH 9 237 237 HOH HOH A . E 4 HOH 10 238 238 HOH HOH A . E 4 HOH 11 239 239 HOH HOH A . E 4 HOH 12 240 240 HOH HOH A . E 4 HOH 13 241 241 HOH HOH A . E 4 HOH 14 242 242 HOH HOH A . E 4 HOH 15 243 243 HOH HOH A . E 4 HOH 16 244 244 HOH HOH A . E 4 HOH 17 245 245 HOH HOH A . E 4 HOH 18 246 246 HOH HOH A . E 4 HOH 19 247 247 HOH HOH A . E 4 HOH 20 248 248 HOH HOH A . E 4 HOH 21 249 249 HOH HOH A . E 4 HOH 22 250 250 HOH HOH A . E 4 HOH 23 251 251 HOH HOH A . E 4 HOH 24 252 4 HOH HOH A . E 4 HOH 25 253 5 HOH HOH A . E 4 HOH 26 254 6 HOH HOH A . E 4 HOH 27 255 7 HOH HOH A . E 4 HOH 28 256 8 HOH HOH A . E 4 HOH 29 257 9 HOH HOH A . E 4 HOH 30 258 10 HOH HOH A . E 4 HOH 31 259 11 HOH HOH A . E 4 HOH 32 260 12 HOH HOH A . E 4 HOH 33 261 13 HOH HOH A . E 4 HOH 34 262 14 HOH HOH A . E 4 HOH 35 263 15 HOH HOH A . E 4 HOH 36 264 16 HOH HOH A . E 4 HOH 37 265 17 HOH HOH A . E 4 HOH 38 266 18 HOH HOH A . E 4 HOH 39 267 19 HOH HOH A . E 4 HOH 40 268 20 HOH HOH A . E 4 HOH 41 269 21 HOH HOH A . E 4 HOH 42 270 22 HOH HOH A . E 4 HOH 43 271 23 HOH HOH A . E 4 HOH 44 272 24 HOH HOH A . E 4 HOH 45 273 25 HOH HOH A . E 4 HOH 46 274 26 HOH HOH A . E 4 HOH 47 275 27 HOH HOH A . E 4 HOH 48 276 28 HOH HOH A . E 4 HOH 49 277 29 HOH HOH A . E 4 HOH 50 278 30 HOH HOH A . E 4 HOH 51 279 31 HOH HOH A . E 4 HOH 52 280 32 HOH HOH A . E 4 HOH 53 281 33 HOH HOH A . E 4 HOH 54 282 34 HOH HOH A . E 4 HOH 55 283 35 HOH HOH A . E 4 HOH 56 284 36 HOH HOH A . E 4 HOH 57 285 37 HOH HOH A . E 4 HOH 58 286 38 HOH HOH A . E 4 HOH 59 287 39 HOH HOH A . E 4 HOH 60 288 40 HOH HOH A . E 4 HOH 61 289 41 HOH HOH A . E 4 HOH 62 290 42 HOH HOH A . E 4 HOH 63 291 43 HOH HOH A . E 4 HOH 64 292 44 HOH HOH A . E 4 HOH 65 293 45 HOH HOH A . E 4 HOH 66 294 46 HOH HOH A . E 4 HOH 67 295 47 HOH HOH A . E 4 HOH 68 296 48 HOH HOH A . E 4 HOH 69 297 49 HOH HOH A . E 4 HOH 70 298 50 HOH HOH A . E 4 HOH 71 299 51 HOH HOH A . E 4 HOH 72 300 52 HOH HOH A . E 4 HOH 73 301 53 HOH HOH A . E 4 HOH 74 302 54 HOH HOH A . E 4 HOH 75 303 55 HOH HOH A . E 4 HOH 76 304 56 HOH HOH A . E 4 HOH 77 305 57 HOH HOH A . E 4 HOH 78 306 58 HOH HOH A . E 4 HOH 79 307 59 HOH HOH A . E 4 HOH 80 308 60 HOH HOH A . E 4 HOH 81 309 61 HOH HOH A . E 4 HOH 82 310 62 HOH HOH A . E 4 HOH 83 311 63 HOH HOH A . E 4 HOH 84 312 64 HOH HOH A . E 4 HOH 85 313 65 HOH HOH A . E 4 HOH 86 314 66 HOH HOH A . E 4 HOH 87 315 67 HOH HOH A . E 4 HOH 88 316 68 HOH HOH A . E 4 HOH 89 317 69 HOH HOH A . E 4 HOH 90 318 70 HOH HOH A . E 4 HOH 91 319 71 HOH HOH A . E 4 HOH 92 320 72 HOH HOH A . E 4 HOH 93 321 73 HOH HOH A . E 4 HOH 94 322 74 HOH HOH A . E 4 HOH 95 323 75 HOH HOH A . E 4 HOH 96 324 76 HOH HOH A . E 4 HOH 97 325 77 HOH HOH A . E 4 HOH 98 326 78 HOH HOH A . E 4 HOH 99 327 79 HOH HOH A . E 4 HOH 100 328 80 HOH HOH A . E 4 HOH 101 329 81 HOH HOH A . E 4 HOH 102 330 82 HOH HOH A . E 4 HOH 103 331 83 HOH HOH A . E 4 HOH 104 332 84 HOH HOH A . E 4 HOH 105 333 85 HOH HOH A . E 4 HOH 106 334 86 HOH HOH A . E 4 HOH 107 335 87 HOH HOH A . E 4 HOH 108 336 88 HOH HOH A . E 4 HOH 109 337 89 HOH HOH A . E 4 HOH 110 338 90 HOH HOH A . E 4 HOH 111 339 91 HOH HOH A . E 4 HOH 112 340 92 HOH HOH A . E 4 HOH 113 341 93 HOH HOH A . E 4 HOH 114 342 94 HOH HOH A . E 4 HOH 115 343 95 HOH HOH A . E 4 HOH 116 344 96 HOH HOH A . E 4 HOH 117 345 97 HOH HOH A . E 4 HOH 118 346 98 HOH HOH A . E 4 HOH 119 347 99 HOH HOH A . E 4 HOH 120 348 100 HOH HOH A . E 4 HOH 121 349 101 HOH HOH A . E 4 HOH 122 350 102 HOH HOH A . E 4 HOH 123 351 103 HOH HOH A . E 4 HOH 124 352 104 HOH HOH A . E 4 HOH 125 353 105 HOH HOH A . E 4 HOH 126 354 106 HOH HOH A . E 4 HOH 127 355 107 HOH HOH A . E 4 HOH 128 356 108 HOH HOH A . E 4 HOH 129 357 109 HOH HOH A . E 4 HOH 130 358 110 HOH HOH A . E 4 HOH 131 359 111 HOH HOH A . E 4 HOH 132 360 112 HOH HOH A . E 4 HOH 133 361 113 HOH HOH A . E 4 HOH 134 362 114 HOH HOH A . E 4 HOH 135 363 115 HOH HOH A . E 4 HOH 136 364 116 HOH HOH A . E 4 HOH 137 365 117 HOH HOH A . E 4 HOH 138 366 118 HOH HOH A . E 4 HOH 139 367 119 HOH HOH A . E 4 HOH 140 368 120 HOH HOH A . E 4 HOH 141 369 121 HOH HOH A . E 4 HOH 142 370 122 HOH HOH A . E 4 HOH 143 371 123 HOH HOH A . E 4 HOH 144 372 124 HOH HOH A . E 4 HOH 145 373 125 HOH HOH A . E 4 HOH 146 374 126 HOH HOH A . E 4 HOH 147 375 127 HOH HOH A . E 4 HOH 148 376 128 HOH HOH A . E 4 HOH 149 377 129 HOH HOH A . E 4 HOH 150 378 130 HOH HOH A . E 4 HOH 151 379 131 HOH HOH A . E 4 HOH 152 380 132 HOH HOH A . E 4 HOH 153 381 133 HOH HOH A . E 4 HOH 154 382 134 HOH HOH A . E 4 HOH 155 383 135 HOH HOH A . E 4 HOH 156 384 136 HOH HOH A . E 4 HOH 157 385 137 HOH HOH A . E 4 HOH 158 386 138 HOH HOH A . E 4 HOH 159 387 139 HOH HOH A . E 4 HOH 160 388 140 HOH HOH A . E 4 HOH 161 389 141 HOH HOH A . E 4 HOH 162 390 142 HOH HOH A . E 4 HOH 163 391 143 HOH HOH A . E 4 HOH 164 392 144 HOH HOH A . E 4 HOH 165 393 145 HOH HOH A . E 4 HOH 166 394 146 HOH HOH A . E 4 HOH 167 395 147 HOH HOH A . E 4 HOH 168 396 148 HOH HOH A . E 4 HOH 169 397 149 HOH HOH A . E 4 HOH 170 398 150 HOH HOH A . E 4 HOH 171 399 151 HOH HOH A . E 4 HOH 172 400 152 HOH HOH A . E 4 HOH 173 401 153 HOH HOH A . E 4 HOH 174 402 154 HOH HOH A . E 4 HOH 175 403 155 HOH HOH A . E 4 HOH 176 404 156 HOH HOH A . E 4 HOH 177 405 157 HOH HOH A . E 4 HOH 178 406 158 HOH HOH A . E 4 HOH 179 407 159 HOH HOH A . E 4 HOH 180 408 160 HOH HOH A . E 4 HOH 181 409 161 HOH HOH A . E 4 HOH 182 410 162 HOH HOH A . E 4 HOH 183 411 163 HOH HOH A . E 4 HOH 184 412 164 HOH HOH A . E 4 HOH 185 413 165 HOH HOH A . E 4 HOH 186 414 166 HOH HOH A . E 4 HOH 187 415 167 HOH HOH A . E 4 HOH 188 416 168 HOH HOH A . E 4 HOH 189 417 169 HOH HOH A . E 4 HOH 190 418 170 HOH HOH A . E 4 HOH 191 419 171 HOH HOH A . E 4 HOH 192 420 172 HOH HOH A . E 4 HOH 193 421 173 HOH HOH A . E 4 HOH 194 422 174 HOH HOH A . E 4 HOH 195 423 175 HOH HOH A . E 4 HOH 196 424 176 HOH HOH A . E 4 HOH 197 425 177 HOH HOH A . E 4 HOH 198 426 178 HOH HOH A . E 4 HOH 199 427 179 HOH HOH A . E 4 HOH 200 428 180 HOH HOH A . E 4 HOH 201 429 181 HOH HOH A . E 4 HOH 202 430 182 HOH HOH A . E 4 HOH 203 431 183 HOH HOH A . E 4 HOH 204 432 184 HOH HOH A . E 4 HOH 205 433 185 HOH HOH A . E 4 HOH 206 434 186 HOH HOH A . E 4 HOH 207 435 187 HOH HOH A . E 4 HOH 208 436 188 HOH HOH A . E 4 HOH 209 437 189 HOH HOH A . E 4 HOH 210 438 190 HOH HOH A . E 4 HOH 211 439 191 HOH HOH A . E 4 HOH 212 440 192 HOH HOH A . E 4 HOH 213 441 193 HOH HOH A . E 4 HOH 214 442 194 HOH HOH A . E 4 HOH 215 443 195 HOH HOH A . E 4 HOH 216 444 196 HOH HOH A . E 4 HOH 217 445 197 HOH HOH A . E 4 HOH 218 446 198 HOH HOH A . E 4 HOH 219 447 199 HOH HOH A . E 4 HOH 220 448 200 HOH HOH A . E 4 HOH 221 449 201 HOH HOH A . E 4 HOH 222 450 202 HOH HOH A . E 4 HOH 223 451 203 HOH HOH A . E 4 HOH 224 452 204 HOH HOH A . E 4 HOH 225 453 205 HOH HOH A . E 4 HOH 226 454 206 HOH HOH A . E 4 HOH 227 455 207 HOH HOH A . E 4 HOH 228 456 208 HOH HOH A . E 4 HOH 229 457 209 HOH HOH A . E 4 HOH 230 458 210 HOH HOH A . E 4 HOH 231 459 211 HOH HOH A . E 4 HOH 232 460 212 HOH HOH A . E 4 HOH 233 461 213 HOH HOH A . E 4 HOH 234 462 214 HOH HOH A . E 4 HOH 235 463 215 HOH HOH A . E 4 HOH 236 464 216 HOH HOH A . E 4 HOH 237 465 217 HOH HOH A . E 4 HOH 238 466 218 HOH HOH A . E 4 HOH 239 467 219 HOH HOH A . E 4 HOH 240 468 220 HOH HOH A . E 4 HOH 241 469 221 HOH HOH A . E 4 HOH 242 470 222 HOH HOH A . E 4 HOH 243 471 223 HOH HOH A . E 4 HOH 244 472 224 HOH HOH A . E 4 HOH 245 473 225 HOH HOH A . E 4 HOH 246 474 226 HOH HOH A . E 4 HOH 247 475 227 HOH HOH A . E 4 HOH 248 476 228 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id MSE _pdbx_struct_mod_residue.label_seq_id 133 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id MSE _pdbx_struct_mod_residue.auth_seq_id 132 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id MET _pdbx_struct_mod_residue.details SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3580 ? 1 MORE -36 ? 1 'SSA (A^2)' 17470 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_556 y,x,-z+1 -0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 133.0890000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A ALA 164 ? A ALA 163 ? 1_555 NA ? D NA . ? A NA 228 ? 1_555 O ? A VAL 167 ? A VAL 166 ? 1_555 83.6 ? 2 O ? A ALA 164 ? A ALA 163 ? 1_555 NA ? D NA . ? A NA 228 ? 1_555 O ? E HOH . ? A HOH 288 ? 1_555 81.0 ? 3 O ? A VAL 167 ? A VAL 166 ? 1_555 NA ? D NA . ? A NA 228 ? 1_555 O ? E HOH . ? A HOH 288 ? 1_555 90.7 ? 4 O ? A ALA 164 ? A ALA 163 ? 1_555 NA ? D NA . ? A NA 228 ? 1_555 O ? E HOH . ? A HOH 335 ? 1_555 96.5 ? 5 O ? A VAL 167 ? A VAL 166 ? 1_555 NA ? D NA . ? A NA 228 ? 1_555 O ? E HOH . ? A HOH 335 ? 1_555 91.4 ? 6 O ? E HOH . ? A HOH 288 ? 1_555 NA ? D NA . ? A NA 228 ? 1_555 O ? E HOH . ? A HOH 335 ? 1_555 176.5 ? 7 O ? A ALA 164 ? A ALA 163 ? 1_555 NA ? D NA . ? A NA 228 ? 1_555 O ? E HOH . ? A HOH 374 ? 1_555 173.4 ? 8 O ? A VAL 167 ? A VAL 166 ? 1_555 NA ? D NA . ? A NA 228 ? 1_555 O ? E HOH . ? A HOH 374 ? 1_555 102.7 ? 9 O ? E HOH . ? A HOH 288 ? 1_555 NA ? D NA . ? A NA 228 ? 1_555 O ? E HOH . ? A HOH 374 ? 1_555 96.9 ? 10 O ? E HOH . ? A HOH 335 ? 1_555 NA ? D NA . ? A NA 228 ? 1_555 O ? E HOH . ? A HOH 374 ? 1_555 85.3 ? 11 O ? A ALA 164 ? A ALA 163 ? 1_555 NA ? D NA . ? A NA 228 ? 1_555 O ? E HOH . ? A HOH 377 ? 1_555 83.1 ? 12 O ? A VAL 167 ? A VAL 166 ? 1_555 NA ? D NA . ? A NA 228 ? 1_555 O ? E HOH . ? A HOH 377 ? 1_555 166.7 ? 13 O ? E HOH . ? A HOH 288 ? 1_555 NA ? D NA . ? A NA 228 ? 1_555 O ? E HOH . ? A HOH 377 ? 1_555 87.8 ? 14 O ? E HOH . ? A HOH 335 ? 1_555 NA ? D NA . ? A NA 228 ? 1_555 O ? E HOH . ? A HOH 377 ? 1_555 89.4 ? 15 O ? E HOH . ? A HOH 374 ? 1_555 NA ? D NA . ? A NA 228 ? 1_555 O ? E HOH . ? A HOH 377 ? 1_555 90.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-04-07 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-08 4 'Structure model' 1 3 2019-07-17 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' software 3 4 'Structure model' struct_conn 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_struct_conn_angle 6 5 'Structure model' struct_conn 7 5 'Structure model' struct_ref_seq_dif 8 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 20 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 21 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 22 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 23 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 24 5 'Structure model' '_pdbx_struct_conn_angle.value' 25 5 'Structure model' '_struct_conn.pdbx_dist_value' 26 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 27 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 28 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 29 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 30 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 31 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 32 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 33 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 34 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 35 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 36 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 37 5 'Structure model' '_struct_ref_seq_dif.details' 38 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 39 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 40 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 8.6438 _pdbx_refine_tls.origin_y 23.7412 _pdbx_refine_tls.origin_z 51.6106 _pdbx_refine_tls.T[1][1] 0.0131 _pdbx_refine_tls.T[2][2] 0.1260 _pdbx_refine_tls.T[3][3] 0.0975 _pdbx_refine_tls.T[1][2] 0.0127 _pdbx_refine_tls.T[1][3] 0.0089 _pdbx_refine_tls.T[2][3] -0.0149 _pdbx_refine_tls.L[1][1] 1.6629 _pdbx_refine_tls.L[2][2] 1.1437 _pdbx_refine_tls.L[3][3] 3.1446 _pdbx_refine_tls.L[1][2] -0.0507 _pdbx_refine_tls.L[1][3] 0.9471 _pdbx_refine_tls.L[2][3] -0.5534 _pdbx_refine_tls.S[1][1] 0.0158 _pdbx_refine_tls.S[1][2] 0.1751 _pdbx_refine_tls.S[1][3] -0.0928 _pdbx_refine_tls.S[2][1] -0.0784 _pdbx_refine_tls.S[2][2] 0.0569 _pdbx_refine_tls.S[2][3] 0.0982 _pdbx_refine_tls.S[3][1] 0.0728 _pdbx_refine_tls.S[3][2] -0.0940 _pdbx_refine_tls.S[3][3] -0.0727 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 3 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 225 _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.5.0102 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 3 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 4 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 XDS . ? ? ? ? 'data reduction' ? ? ? 6 SHELXD . ? ? ? ? phasing ? ? ? 7 autoSHARP . ? ? ? ? phasing ? ? ? 8 # _pdbx_entry_details.entry_id 3LWD _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ALA _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 139 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 46.16 _pdbx_validate_torsion.psi -130.84 # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag Y _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 1 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id A _pdbx_unobs_or_zero_occ_atoms.auth_comp_id LYS _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 30 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id NZ _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id A _pdbx_unobs_or_zero_occ_atoms.label_comp_id LYS _pdbx_unobs_or_zero_occ_atoms.label_seq_id 31 _pdbx_unobs_or_zero_occ_atoms.label_atom_id NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A MSE 1 ? A MSE 2 3 1 Y 1 A MSE 2 ? A MSE 3 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 'SODIUM ION' NA 4 water HOH #