data_3LX5 # _entry.id 3LX5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3LX5 pdb_00003lx5 10.2210/pdb3lx5/pdb RCSB RCSB057840 ? ? WWPDB D_1000057840 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3LX8 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3LX5 _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2010-02-24 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ash, M.R.' 1 'Guilfoyle, A.' 2 'Maher, M.J.' 3 'Clarke, R.J.' 4 'Guss, J.M.' 5 'Jormakka, M.' 6 # _citation.id primary _citation.title 'Potassium-activated GTPase reaction in the G Protein-coupled ferrous iron transporter B.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 285 _citation.page_first 14594 _citation.page_last 14602 _citation.year 2010 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20220129 _citation.pdbx_database_id_DOI 10.1074/jbc.M110.111914 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ash, M.R.' 1 ? primary 'Guilfoyle, A.' 2 ? primary 'Clarke, R.J.' 3 ? primary 'Guss, J.M.' 4 ? primary 'Maher, M.J.' 5 ? primary 'Jormakka, M.' 6 ? # _cell.length_a 49.1 _cell.length_b 82.2 _cell.length_c 148.8 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3LX5 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.entry_id 3LX5 _symmetry.Int_Tables_number 20 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ferrous iron uptake transporter protein B' 30203.150 1 ? ? 'Cytoplasmic domains' ? 2 non-polymer syn ;2-amino-9-(5-O-[(R)-hydroxy{[(R)-hydroxy(phosphonoamino)phosphoryl]oxy}phosphoryl]-3-O-{[2-(methylamino)phenyl]carbonyl}-beta-D-erythro-pentofuranosyl-2-ulose)-1,9-dihydro-6H-purin-6-one ; 653.327 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 5 water nat water 18.015 112 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSMTEIALIGNPNSGKTSLFNLITGHNQRVGNWPGVTVERKSGLVKKNKDLEIQDLPGIYSMSPYSPEEKVARDYLLSQR ADSILNVVDATNLERNLYLTTQLIETGIPVTIALNMIDVLDGQGKKINVDKLSYHLGVPVVATSALKQTGVDQVVKKAAH TTTSTVGDLAFPIYDDRLEAAISQILEVLGNSVPQRSARFYAIKLFEQDSLVEAELDLSQFQRKEIEDIIRITEEIFTED AESIVINERYAFIERVCQMAESHTEDFALTLS ; _entity_poly.pdbx_seq_one_letter_code_can ;GSMTEIALIGNPNSGKTSLFNLITGHNQRVGNWPGVTVERKSGLVKKNKDLEIQDLPGIYSMSPYSPEEKVARDYLLSQR ADSILNVVDATNLERNLYLTTQLIETGIPVTIALNMIDVLDGQGKKINVDKLSYHLGVPVVATSALKQTGVDQVVKKAAH TTTSTVGDLAFPIYDDRLEAAISQILEVLGNSVPQRSARFYAIKLFEQDSLVEAELDLSQFQRKEIEDIIRITEEIFTED AESIVINERYAFIERVCQMAESHTEDFALTLS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 MET n 1 4 THR n 1 5 GLU n 1 6 ILE n 1 7 ALA n 1 8 LEU n 1 9 ILE n 1 10 GLY n 1 11 ASN n 1 12 PRO n 1 13 ASN n 1 14 SER n 1 15 GLY n 1 16 LYS n 1 17 THR n 1 18 SER n 1 19 LEU n 1 20 PHE n 1 21 ASN n 1 22 LEU n 1 23 ILE n 1 24 THR n 1 25 GLY n 1 26 HIS n 1 27 ASN n 1 28 GLN n 1 29 ARG n 1 30 VAL n 1 31 GLY n 1 32 ASN n 1 33 TRP n 1 34 PRO n 1 35 GLY n 1 36 VAL n 1 37 THR n 1 38 VAL n 1 39 GLU n 1 40 ARG n 1 41 LYS n 1 42 SER n 1 43 GLY n 1 44 LEU n 1 45 VAL n 1 46 LYS n 1 47 LYS n 1 48 ASN n 1 49 LYS n 1 50 ASP n 1 51 LEU n 1 52 GLU n 1 53 ILE n 1 54 GLN n 1 55 ASP n 1 56 LEU n 1 57 PRO n 1 58 GLY n 1 59 ILE n 1 60 TYR n 1 61 SER n 1 62 MET n 1 63 SER n 1 64 PRO n 1 65 TYR n 1 66 SER n 1 67 PRO n 1 68 GLU n 1 69 GLU n 1 70 LYS n 1 71 VAL n 1 72 ALA n 1 73 ARG n 1 74 ASP n 1 75 TYR n 1 76 LEU n 1 77 LEU n 1 78 SER n 1 79 GLN n 1 80 ARG n 1 81 ALA n 1 82 ASP n 1 83 SER n 1 84 ILE n 1 85 LEU n 1 86 ASN n 1 87 VAL n 1 88 VAL n 1 89 ASP n 1 90 ALA n 1 91 THR n 1 92 ASN n 1 93 LEU n 1 94 GLU n 1 95 ARG n 1 96 ASN n 1 97 LEU n 1 98 TYR n 1 99 LEU n 1 100 THR n 1 101 THR n 1 102 GLN n 1 103 LEU n 1 104 ILE n 1 105 GLU n 1 106 THR n 1 107 GLY n 1 108 ILE n 1 109 PRO n 1 110 VAL n 1 111 THR n 1 112 ILE n 1 113 ALA n 1 114 LEU n 1 115 ASN n 1 116 MET n 1 117 ILE n 1 118 ASP n 1 119 VAL n 1 120 LEU n 1 121 ASP n 1 122 GLY n 1 123 GLN n 1 124 GLY n 1 125 LYS n 1 126 LYS n 1 127 ILE n 1 128 ASN n 1 129 VAL n 1 130 ASP n 1 131 LYS n 1 132 LEU n 1 133 SER n 1 134 TYR n 1 135 HIS n 1 136 LEU n 1 137 GLY n 1 138 VAL n 1 139 PRO n 1 140 VAL n 1 141 VAL n 1 142 ALA n 1 143 THR n 1 144 SER n 1 145 ALA n 1 146 LEU n 1 147 LYS n 1 148 GLN n 1 149 THR n 1 150 GLY n 1 151 VAL n 1 152 ASP n 1 153 GLN n 1 154 VAL n 1 155 VAL n 1 156 LYS n 1 157 LYS n 1 158 ALA n 1 159 ALA n 1 160 HIS n 1 161 THR n 1 162 THR n 1 163 THR n 1 164 SER n 1 165 THR n 1 166 VAL n 1 167 GLY n 1 168 ASP n 1 169 LEU n 1 170 ALA n 1 171 PHE n 1 172 PRO n 1 173 ILE n 1 174 TYR n 1 175 ASP n 1 176 ASP n 1 177 ARG n 1 178 LEU n 1 179 GLU n 1 180 ALA n 1 181 ALA n 1 182 ILE n 1 183 SER n 1 184 GLN n 1 185 ILE n 1 186 LEU n 1 187 GLU n 1 188 VAL n 1 189 LEU n 1 190 GLY n 1 191 ASN n 1 192 SER n 1 193 VAL n 1 194 PRO n 1 195 GLN n 1 196 ARG n 1 197 SER n 1 198 ALA n 1 199 ARG n 1 200 PHE n 1 201 TYR n 1 202 ALA n 1 203 ILE n 1 204 LYS n 1 205 LEU n 1 206 PHE n 1 207 GLU n 1 208 GLN n 1 209 ASP n 1 210 SER n 1 211 LEU n 1 212 VAL n 1 213 GLU n 1 214 ALA n 1 215 GLU n 1 216 LEU n 1 217 ASP n 1 218 LEU n 1 219 SER n 1 220 GLN n 1 221 PHE n 1 222 GLN n 1 223 ARG n 1 224 LYS n 1 225 GLU n 1 226 ILE n 1 227 GLU n 1 228 ASP n 1 229 ILE n 1 230 ILE n 1 231 ARG n 1 232 ILE n 1 233 THR n 1 234 GLU n 1 235 GLU n 1 236 ILE n 1 237 PHE n 1 238 THR n 1 239 GLU n 1 240 ASP n 1 241 ALA n 1 242 GLU n 1 243 SER n 1 244 ILE n 1 245 VAL n 1 246 ILE n 1 247 ASN n 1 248 GLU n 1 249 ARG n 1 250 TYR n 1 251 ALA n 1 252 PHE n 1 253 ILE n 1 254 GLU n 1 255 ARG n 1 256 VAL n 1 257 CYS n 1 258 GLN n 1 259 MET n 1 260 ALA n 1 261 GLU n 1 262 SER n 1 263 HIS n 1 264 THR n 1 265 GLU n 1 266 ASP n 1 267 PHE n 1 268 ALA n 1 269 LEU n 1 270 THR n 1 271 LEU n 1 272 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'feoB, stu0608' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'LMG 18311' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptococcus thermophilus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 264199 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX-4T-1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q5M586_STRT2 _struct_ref.pdbx_db_accession Q5M586 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTEIALIGNPNSGKTSLFNLITGHNQRVGNWPGVTVERKSGLVKKNKDLEIQDLPGIYSMSPYSPEEKVARDYLLSQRAD SILNVVDATNLERNLYLTTQLIETGIPVTIALNMIDVLDGQGKKINVDKLSYHLGVPVVATSALKQTGVDQVVKKAAHTT TSTVGDLAFPIYDDRLEAAISQILEVLGNSVPQRSARFYAIKLFEQDSLVEAELDLSQFQRKEIEDIIRITEEIFTEDAE SIVINERYAFIERVCQMAESHTEDFALTLS ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3LX5 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 272 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q5M586 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 270 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 270 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3LX5 GLY A 1 ? UNP Q5M586 ? ? 'expression tag' -1 1 1 3LX5 SER A 2 ? UNP Q5M586 ? ? 'expression tag' 0 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight AGO non-polymer . ;2-amino-9-(5-O-[(R)-hydroxy{[(R)-hydroxy(phosphonoamino)phosphoryl]oxy}phosphoryl]-3-O-{[2-(methylamino)phenyl]carbonyl}-beta-D-erythro-pentofuranosyl-2-ulose)-1,9-dihydro-6H-purin-6-one ; ? 'C18 H22 N7 O14 P3' 653.327 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3LX5 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity 0.679 _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.49 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 50.51 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details '0.02M Malic acid, 0.04M MES, 0.04M Tris, 25% (w/v) PEG 1500, pH 8.0, vapor diffusion, hanging drop, temperature 298K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR 345 mm plate' _diffrn_detector.pdbx_collection_date 2009-06-24 _diffrn_detector.details 'Osmic mirrors' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5412 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_wavelength_list 1.5412 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 3LX5 _reflns.d_resolution_high 1.900 _reflns.d_resolution_low 50.000 _reflns.number_obs 23847 _reflns.pdbx_Rmerge_I_obs 0.118 _reflns.pdbx_netI_over_sigmaI 14.200 _reflns.pdbx_chi_squared 1.204 _reflns.pdbx_redundancy 5.700 _reflns.percent_possible_obs 97.800 _reflns.observed_criterion_sigma_F -3 _reflns.observed_criterion_sigma_I -3 _reflns.number_all 23847 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate 24.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 1.93 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.336 _reflns_shell.meanI_over_sigI_obs 3.5 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 1.063 _reflns_shell.pdbx_redundancy 4.40 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1026 _reflns_shell.percent_possible_all 85.40 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3LX5 _refine.ls_d_res_high 1.900 _refine.ls_d_res_low 23.610 _refine.pdbx_ls_sigma_F -3 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.000 _refine.ls_number_reflns_obs 23665 _refine.ls_number_reflns_all 23665 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : RESIDUAL ONLY' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.199 _refine.ls_R_factor_R_work 0.197 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.241 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1209 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 18.057 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model 'Isotropic with TLS' _refine.aniso_B[1][1] -0.870 _refine.aniso_B[2][2] 2.050 _refine.aniso_B[3][3] -1.180 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.945 _refine.correlation_coeff_Fo_to_Fc_free 0.914 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.156 _refine.pdbx_overall_ESU_R_Free 0.149 _refine.overall_SU_ML 0.094 _refine.overall_SU_B 6.497 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 3HYR _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 48.00 _refine.B_iso_min 4.49 _refine.occupancy_max 1.00 _refine.occupancy_min 0.00 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2027 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 49 _refine_hist.number_atoms_solvent 112 _refine_hist.number_atoms_total 2188 _refine_hist.d_res_high 1.900 _refine_hist.d_res_low 23.610 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 2171 0.014 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2965 1.479 1.991 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 273 5.184 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 101 36.262 25.248 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 378 12.694 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 13 17.891 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 348 0.097 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1638 0.006 0.021 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1337 1.486 2.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2185 2.135 3.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 834 2.254 2.500 ? 'X-RAY DIFFRACTION' ? r_scangle_it 780 3.239 3.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.900 _refine_ls_shell.d_res_low 1.949 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 87.280 _refine_ls_shell.number_reflns_R_work 1426 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.254 _refine_ls_shell.R_factor_R_free 0.277 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 77 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1503 _refine_ls_shell.number_reflns_obs 1503 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3LX5 _struct.title 'Crystal structure of mGMPPNP-bound NFeoB from S. thermophilus' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3LX5 _struct_keywords.text 'G protein, iron transport, GTP-binding, GTPase, transmembrane, Nucleotide-binding, METAL TRANSPORT' _struct_keywords.pdbx_keywords 'METAL TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 15 ? GLY A 25 ? GLY A 13 GLY A 23 1 ? 11 HELX_P HELX_P2 2 SER A 66 ? SER A 78 ? SER A 64 SER A 76 1 ? 13 HELX_P HELX_P3 3 ASN A 92 ? THR A 106 ? ASN A 90 THR A 104 1 ? 15 HELX_P HELX_P4 4 MET A 116 ? GLN A 123 ? MET A 114 GLN A 121 1 ? 8 HELX_P HELX_P5 5 ASN A 128 ? GLY A 137 ? ASN A 126 GLY A 135 1 ? 10 HELX_P HELX_P6 6 GLY A 150 ? THR A 161 ? GLY A 148 THR A 159 1 ? 12 HELX_P HELX_P7 7 ASP A 175 ? GLY A 190 ? ASP A 173 GLY A 188 1 ? 16 HELX_P HELX_P8 8 ASN A 191 ? VAL A 193 ? ASN A 189 VAL A 191 5 ? 3 HELX_P HELX_P9 9 PRO A 194 ? ARG A 196 ? PRO A 192 ARG A 194 5 ? 3 HELX_P HELX_P10 10 SER A 197 ? GLU A 207 ? SER A 195 GLU A 205 1 ? 11 HELX_P HELX_P11 11 ASP A 209 ? LEU A 216 ? ASP A 207 LEU A 214 1 ? 8 HELX_P HELX_P12 12 SER A 219 ? THR A 238 ? SER A 217 THR A 236 1 ? 20 HELX_P HELX_P13 13 ASP A 240 ? GLU A 261 ? ASP A 238 GLU A 259 1 ? 22 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A THR 17 OG1 ? ? ? 1_555 C MG . MG ? ? A THR 15 A MG 301 1_555 ? ? ? ? ? ? ? 2.121 ? ? metalc2 metalc ? ? A THR 37 OG1 ? ? ? 1_555 C MG . MG ? ? A THR 35 A MG 301 1_555 ? ? ? ? ? ? ? 2.081 ? ? metalc3 metalc ? ? B AGO . O2B ? ? ? 1_555 C MG . MG ? ? A AGO 300 A MG 301 1_555 ? ? ? ? ? ? ? 1.974 ? ? metalc4 metalc ? ? B AGO . O1G ? ? ? 1_555 C MG . MG ? ? A AGO 300 A MG 301 1_555 ? ? ? ? ? ? ? 2.018 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 301 A HOH 369 1_555 ? ? ? ? ? ? ? 2.094 ? ? metalc6 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 301 A HOH 370 1_555 ? ? ? ? ? ? ? 2.329 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 41 ? VAL A 45 ? LYS A 39 VAL A 43 A 2 ASN A 48 ? ASP A 55 ? ASN A 46 ASP A 53 A 3 GLU A 5 ? ILE A 9 ? GLU A 3 ILE A 7 A 4 SER A 83 ? ASP A 89 ? SER A 81 ASP A 87 A 5 VAL A 110 ? ASN A 115 ? VAL A 108 ASN A 113 A 6 VAL A 140 ? ALA A 142 ? VAL A 138 ALA A 140 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 41 ? N LYS A 39 O ASP A 55 ? O ASP A 53 A 2 3 O GLN A 54 ? O GLN A 52 N LEU A 8 ? N LEU A 6 A 3 4 N ALA A 7 ? N ALA A 5 O SER A 83 ? O SER A 81 A 4 5 N VAL A 88 ? N VAL A 86 O ALA A 113 ? O ALA A 111 A 5 6 N LEU A 114 ? N LEU A 112 O VAL A 141 ? O VAL A 139 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A AGO 300 ? 26 'BINDING SITE FOR RESIDUE AGO A 300' AC2 Software A MG 301 ? 5 'BINDING SITE FOR RESIDUE MG A 301' AC3 Software A GOL 400 ? 8 'BINDING SITE FOR RESIDUE GOL A 400' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 26 PRO A 12 ? PRO A 10 . ? 1_555 ? 2 AC1 26 ASN A 13 ? ASN A 11 . ? 1_555 ? 3 AC1 26 SER A 14 ? SER A 12 . ? 1_555 ? 4 AC1 26 GLY A 15 ? GLY A 13 . ? 1_555 ? 5 AC1 26 LYS A 16 ? LYS A 14 . ? 1_555 ? 6 AC1 26 THR A 17 ? THR A 15 . ? 1_555 ? 7 AC1 26 SER A 18 ? SER A 16 . ? 1_555 ? 8 AC1 26 VAL A 30 ? VAL A 28 . ? 1_555 ? 9 AC1 26 GLY A 31 ? GLY A 29 . ? 1_555 ? 10 AC1 26 ASN A 32 ? ASN A 30 . ? 1_555 ? 11 AC1 26 GLY A 35 ? GLY A 33 . ? 1_555 ? 12 AC1 26 VAL A 36 ? VAL A 34 . ? 1_555 ? 13 AC1 26 THR A 37 ? THR A 35 . ? 1_555 ? 14 AC1 26 GLY A 58 ? GLY A 56 . ? 1_555 ? 15 AC1 26 ASN A 115 ? ASN A 113 . ? 1_555 ? 16 AC1 26 MET A 116 ? MET A 114 . ? 1_555 ? 17 AC1 26 ASP A 118 ? ASP A 116 . ? 1_555 ? 18 AC1 26 VAL A 119 ? VAL A 117 . ? 1_555 ? 19 AC1 26 SER A 144 ? SER A 142 . ? 1_555 ? 20 AC1 26 ALA A 145 ? ALA A 143 . ? 1_555 ? 21 AC1 26 LEU A 146 ? LEU A 144 . ? 1_555 ? 22 AC1 26 HOH E . ? HOH A 282 . ? 1_555 ? 23 AC1 26 MG C . ? MG A 301 . ? 1_555 ? 24 AC1 26 HOH E . ? HOH A 304 . ? 1_555 ? 25 AC1 26 HOH E . ? HOH A 369 . ? 1_555 ? 26 AC1 26 HOH E . ? HOH A 370 . ? 1_555 ? 27 AC2 5 THR A 17 ? THR A 15 . ? 1_555 ? 28 AC2 5 THR A 37 ? THR A 35 . ? 1_555 ? 29 AC2 5 AGO B . ? AGO A 300 . ? 1_555 ? 30 AC2 5 HOH E . ? HOH A 369 . ? 1_555 ? 31 AC2 5 HOH E . ? HOH A 370 . ? 1_555 ? 32 AC3 8 GLN A 153 ? GLN A 151 . ? 1_555 ? 33 AC3 8 LYS A 156 ? LYS A 154 . ? 1_555 ? 34 AC3 8 LYS A 157 ? LYS A 155 . ? 1_555 ? 35 AC3 8 HIS A 160 ? HIS A 158 . ? 1_555 ? 36 AC3 8 ARG A 223 ? ARG A 221 . ? 5_455 ? 37 AC3 8 LYS A 224 ? LYS A 222 . ? 5_455 ? 38 AC3 8 GLU A 227 ? GLU A 225 . ? 5_455 ? 39 AC3 8 HOH E . ? HOH A 375 . ? 1_555 ? # _atom_sites.entry_id 3LX5 _atom_sites.fract_transf_matrix[1][1] 0.020371 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012173 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006721 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 ? ? ? A . n A 1 2 SER 2 0 ? ? ? A . n A 1 3 MET 3 1 ? ? ? A . n A 1 4 THR 4 2 2 THR THR A . n A 1 5 GLU 5 3 3 GLU GLU A . n A 1 6 ILE 6 4 4 ILE ILE A . n A 1 7 ALA 7 5 5 ALA ALA A . n A 1 8 LEU 8 6 6 LEU LEU A . n A 1 9 ILE 9 7 7 ILE ILE A . n A 1 10 GLY 10 8 8 GLY GLY A . n A 1 11 ASN 11 9 9 ASN ASN A . n A 1 12 PRO 12 10 10 PRO PRO A . n A 1 13 ASN 13 11 11 ASN ASN A . n A 1 14 SER 14 12 12 SER SER A . n A 1 15 GLY 15 13 13 GLY GLY A . n A 1 16 LYS 16 14 14 LYS LYS A . n A 1 17 THR 17 15 15 THR THR A . n A 1 18 SER 18 16 16 SER SER A . n A 1 19 LEU 19 17 17 LEU LEU A . n A 1 20 PHE 20 18 18 PHE PHE A . n A 1 21 ASN 21 19 19 ASN ASN A . n A 1 22 LEU 22 20 20 LEU LEU A . n A 1 23 ILE 23 21 21 ILE ILE A . n A 1 24 THR 24 22 22 THR THR A . n A 1 25 GLY 25 23 23 GLY GLY A . n A 1 26 HIS 26 24 24 HIS HIS A . n A 1 27 ASN 27 25 25 ASN ASN A . n A 1 28 GLN 28 26 26 GLN GLN A . n A 1 29 ARG 29 27 27 ARG ARG A . n A 1 30 VAL 30 28 28 VAL VAL A . n A 1 31 GLY 31 29 29 GLY GLY A . n A 1 32 ASN 32 30 30 ASN ASN A . n A 1 33 TRP 33 31 31 TRP TRP A . n A 1 34 PRO 34 32 32 PRO PRO A . n A 1 35 GLY 35 33 33 GLY GLY A . n A 1 36 VAL 36 34 34 VAL VAL A . n A 1 37 THR 37 35 35 THR THR A . n A 1 38 VAL 38 36 36 VAL VAL A . n A 1 39 GLU 39 37 37 GLU GLU A . n A 1 40 ARG 40 38 38 ARG ARG A . n A 1 41 LYS 41 39 39 LYS LYS A . n A 1 42 SER 42 40 40 SER SER A . n A 1 43 GLY 43 41 41 GLY GLY A . n A 1 44 LEU 44 42 42 LEU LEU A . n A 1 45 VAL 45 43 43 VAL VAL A . n A 1 46 LYS 46 44 44 LYS LYS A . n A 1 47 LYS 47 45 45 LYS LYS A . n A 1 48 ASN 48 46 46 ASN ASN A . n A 1 49 LYS 49 47 47 LYS LYS A . n A 1 50 ASP 50 48 48 ASP ASP A . n A 1 51 LEU 51 49 49 LEU LEU A . n A 1 52 GLU 52 50 50 GLU GLU A . n A 1 53 ILE 53 51 51 ILE ILE A . n A 1 54 GLN 54 52 52 GLN GLN A . n A 1 55 ASP 55 53 53 ASP ASP A . n A 1 56 LEU 56 54 54 LEU LEU A . n A 1 57 PRO 57 55 55 PRO PRO A . n A 1 58 GLY 58 56 56 GLY GLY A . n A 1 59 ILE 59 57 57 ILE ILE A . n A 1 60 TYR 60 58 58 TYR TYR A . n A 1 61 SER 61 59 59 SER SER A . n A 1 62 MET 62 60 60 MET MET A . n A 1 63 SER 63 61 61 SER SER A . n A 1 64 PRO 64 62 62 PRO PRO A . n A 1 65 TYR 65 63 63 TYR TYR A . n A 1 66 SER 66 64 64 SER SER A . n A 1 67 PRO 67 65 65 PRO PRO A . n A 1 68 GLU 68 66 66 GLU GLU A . n A 1 69 GLU 69 67 67 GLU GLU A . n A 1 70 LYS 70 68 68 LYS LYS A . n A 1 71 VAL 71 69 69 VAL VAL A . n A 1 72 ALA 72 70 70 ALA ALA A . n A 1 73 ARG 73 71 71 ARG ARG A . n A 1 74 ASP 74 72 72 ASP ASP A . n A 1 75 TYR 75 73 73 TYR TYR A . n A 1 76 LEU 76 74 74 LEU LEU A . n A 1 77 LEU 77 75 75 LEU LEU A . n A 1 78 SER 78 76 76 SER SER A . n A 1 79 GLN 79 77 77 GLN GLN A . n A 1 80 ARG 80 78 78 ARG ARG A . n A 1 81 ALA 81 79 79 ALA ALA A . n A 1 82 ASP 82 80 80 ASP ASP A . n A 1 83 SER 83 81 81 SER SER A . n A 1 84 ILE 84 82 82 ILE ILE A . n A 1 85 LEU 85 83 83 LEU LEU A . n A 1 86 ASN 86 84 84 ASN ASN A . n A 1 87 VAL 87 85 85 VAL VAL A . n A 1 88 VAL 88 86 86 VAL VAL A . n A 1 89 ASP 89 87 87 ASP ASP A . n A 1 90 ALA 90 88 88 ALA ALA A . n A 1 91 THR 91 89 89 THR THR A . n A 1 92 ASN 92 90 90 ASN ASN A . n A 1 93 LEU 93 91 91 LEU LEU A . n A 1 94 GLU 94 92 92 GLU GLU A . n A 1 95 ARG 95 93 93 ARG ARG A . n A 1 96 ASN 96 94 94 ASN ASN A . n A 1 97 LEU 97 95 95 LEU LEU A . n A 1 98 TYR 98 96 96 TYR TYR A . n A 1 99 LEU 99 97 97 LEU LEU A . n A 1 100 THR 100 98 98 THR THR A . n A 1 101 THR 101 99 99 THR THR A . n A 1 102 GLN 102 100 100 GLN GLN A . n A 1 103 LEU 103 101 101 LEU LEU A . n A 1 104 ILE 104 102 102 ILE ILE A . n A 1 105 GLU 105 103 103 GLU GLU A . n A 1 106 THR 106 104 104 THR THR A . n A 1 107 GLY 107 105 105 GLY GLY A . n A 1 108 ILE 108 106 106 ILE ILE A . n A 1 109 PRO 109 107 107 PRO PRO A . n A 1 110 VAL 110 108 108 VAL VAL A . n A 1 111 THR 111 109 109 THR THR A . n A 1 112 ILE 112 110 110 ILE ILE A . n A 1 113 ALA 113 111 111 ALA ALA A . n A 1 114 LEU 114 112 112 LEU LEU A . n A 1 115 ASN 115 113 113 ASN ASN A . n A 1 116 MET 116 114 114 MET MET A . n A 1 117 ILE 117 115 115 ILE ILE A . n A 1 118 ASP 118 116 116 ASP ASP A . n A 1 119 VAL 119 117 117 VAL VAL A . n A 1 120 LEU 120 118 118 LEU LEU A . n A 1 121 ASP 121 119 119 ASP ASP A . n A 1 122 GLY 122 120 120 GLY GLY A . n A 1 123 GLN 123 121 121 GLN GLN A . n A 1 124 GLY 124 122 122 GLY GLY A . n A 1 125 LYS 125 123 123 LYS LYS A . n A 1 126 LYS 126 124 124 LYS LYS A . n A 1 127 ILE 127 125 125 ILE ILE A . n A 1 128 ASN 128 126 126 ASN ASN A . n A 1 129 VAL 129 127 127 VAL VAL A . n A 1 130 ASP 130 128 128 ASP ASP A . n A 1 131 LYS 131 129 129 LYS LYS A . n A 1 132 LEU 132 130 130 LEU LEU A . n A 1 133 SER 133 131 131 SER SER A . n A 1 134 TYR 134 132 132 TYR TYR A . n A 1 135 HIS 135 133 133 HIS HIS A . n A 1 136 LEU 136 134 134 LEU LEU A . n A 1 137 GLY 137 135 135 GLY GLY A . n A 1 138 VAL 138 136 136 VAL VAL A . n A 1 139 PRO 139 137 137 PRO PRO A . n A 1 140 VAL 140 138 138 VAL VAL A . n A 1 141 VAL 141 139 139 VAL VAL A . n A 1 142 ALA 142 140 140 ALA ALA A . n A 1 143 THR 143 141 141 THR THR A . n A 1 144 SER 144 142 142 SER SER A . n A 1 145 ALA 145 143 143 ALA ALA A . n A 1 146 LEU 146 144 144 LEU LEU A . n A 1 147 LYS 147 145 145 LYS LYS A . n A 1 148 GLN 148 146 146 GLN GLN A . n A 1 149 THR 149 147 147 THR THR A . n A 1 150 GLY 150 148 148 GLY GLY A . n A 1 151 VAL 151 149 149 VAL VAL A . n A 1 152 ASP 152 150 150 ASP ASP A . n A 1 153 GLN 153 151 151 GLN GLN A . n A 1 154 VAL 154 152 152 VAL VAL A . n A 1 155 VAL 155 153 153 VAL VAL A . n A 1 156 LYS 156 154 154 LYS LYS A . n A 1 157 LYS 157 155 155 LYS LYS A . n A 1 158 ALA 158 156 156 ALA ALA A . n A 1 159 ALA 159 157 157 ALA ALA A . n A 1 160 HIS 160 158 158 HIS HIS A . n A 1 161 THR 161 159 159 THR THR A . n A 1 162 THR 162 160 160 THR THR A . n A 1 163 THR 163 161 161 THR THR A . n A 1 164 SER 164 162 ? ? ? A . n A 1 165 THR 165 163 ? ? ? A . n A 1 166 VAL 166 164 ? ? ? A . n A 1 167 GLY 167 165 ? ? ? A . n A 1 168 ASP 168 166 ? ? ? A . n A 1 169 LEU 169 167 167 LEU LEU A . n A 1 170 ALA 170 168 168 ALA ALA A . n A 1 171 PHE 171 169 169 PHE PHE A . n A 1 172 PRO 172 170 170 PRO PRO A . n A 1 173 ILE 173 171 171 ILE ILE A . n A 1 174 TYR 174 172 172 TYR TYR A . n A 1 175 ASP 175 173 173 ASP ASP A . n A 1 176 ASP 176 174 174 ASP ASP A . n A 1 177 ARG 177 175 175 ARG ARG A . n A 1 178 LEU 178 176 176 LEU LEU A . n A 1 179 GLU 179 177 177 GLU GLU A . n A 1 180 ALA 180 178 178 ALA ALA A . n A 1 181 ALA 181 179 179 ALA ALA A . n A 1 182 ILE 182 180 180 ILE ILE A . n A 1 183 SER 183 181 181 SER SER A . n A 1 184 GLN 184 182 182 GLN GLN A . n A 1 185 ILE 185 183 183 ILE ILE A . n A 1 186 LEU 186 184 184 LEU LEU A . n A 1 187 GLU 187 185 185 GLU GLU A . n A 1 188 VAL 188 186 186 VAL VAL A . n A 1 189 LEU 189 187 187 LEU LEU A . n A 1 190 GLY 190 188 188 GLY GLY A . n A 1 191 ASN 191 189 189 ASN ASN A . n A 1 192 SER 192 190 190 SER SER A . n A 1 193 VAL 193 191 191 VAL VAL A . n A 1 194 PRO 194 192 192 PRO PRO A . n A 1 195 GLN 195 193 193 GLN GLN A . n A 1 196 ARG 196 194 194 ARG ARG A . n A 1 197 SER 197 195 195 SER SER A . n A 1 198 ALA 198 196 196 ALA ALA A . n A 1 199 ARG 199 197 197 ARG ARG A . n A 1 200 PHE 200 198 198 PHE PHE A . n A 1 201 TYR 201 199 199 TYR TYR A . n A 1 202 ALA 202 200 200 ALA ALA A . n A 1 203 ILE 203 201 201 ILE ILE A . n A 1 204 LYS 204 202 202 LYS LYS A . n A 1 205 LEU 205 203 203 LEU LEU A . n A 1 206 PHE 206 204 204 PHE PHE A . n A 1 207 GLU 207 205 205 GLU GLU A . n A 1 208 GLN 208 206 206 GLN GLN A . n A 1 209 ASP 209 207 207 ASP ASP A . n A 1 210 SER 210 208 208 SER SER A . n A 1 211 LEU 211 209 209 LEU LEU A . n A 1 212 VAL 212 210 210 VAL VAL A . n A 1 213 GLU 213 211 211 GLU GLU A . n A 1 214 ALA 214 212 212 ALA ALA A . n A 1 215 GLU 215 213 213 GLU GLU A . n A 1 216 LEU 216 214 214 LEU LEU A . n A 1 217 ASP 217 215 215 ASP ASP A . n A 1 218 LEU 218 216 216 LEU LEU A . n A 1 219 SER 219 217 217 SER SER A . n A 1 220 GLN 220 218 218 GLN GLN A . n A 1 221 PHE 221 219 219 PHE PHE A . n A 1 222 GLN 222 220 220 GLN GLN A . n A 1 223 ARG 223 221 221 ARG ARG A . n A 1 224 LYS 224 222 222 LYS LYS A . n A 1 225 GLU 225 223 223 GLU GLU A . n A 1 226 ILE 226 224 224 ILE ILE A . n A 1 227 GLU 227 225 225 GLU GLU A . n A 1 228 ASP 228 226 226 ASP ASP A . n A 1 229 ILE 229 227 227 ILE ILE A . n A 1 230 ILE 230 228 228 ILE ILE A . n A 1 231 ARG 231 229 229 ARG ARG A . n A 1 232 ILE 232 230 230 ILE ILE A . n A 1 233 THR 233 231 231 THR THR A . n A 1 234 GLU 234 232 232 GLU GLU A . n A 1 235 GLU 235 233 233 GLU GLU A . n A 1 236 ILE 236 234 234 ILE ILE A . n A 1 237 PHE 237 235 235 PHE PHE A . n A 1 238 THR 238 236 236 THR THR A . n A 1 239 GLU 239 237 237 GLU GLU A . n A 1 240 ASP 240 238 238 ASP ASP A . n A 1 241 ALA 241 239 239 ALA ALA A . n A 1 242 GLU 242 240 240 GLU GLU A . n A 1 243 SER 243 241 241 SER SER A . n A 1 244 ILE 244 242 242 ILE ILE A . n A 1 245 VAL 245 243 243 VAL VAL A . n A 1 246 ILE 246 244 244 ILE ILE A . n A 1 247 ASN 247 245 245 ASN ASN A . n A 1 248 GLU 248 246 246 GLU GLU A . n A 1 249 ARG 249 247 247 ARG ARG A . n A 1 250 TYR 250 248 248 TYR TYR A . n A 1 251 ALA 251 249 249 ALA ALA A . n A 1 252 PHE 252 250 250 PHE PHE A . n A 1 253 ILE 253 251 251 ILE ILE A . n A 1 254 GLU 254 252 252 GLU GLU A . n A 1 255 ARG 255 253 253 ARG ARG A . n A 1 256 VAL 256 254 254 VAL VAL A . n A 1 257 CYS 257 255 255 CYS CYS A . n A 1 258 GLN 258 256 256 GLN GLN A . n A 1 259 MET 259 257 257 MET MET A . n A 1 260 ALA 260 258 258 ALA ALA A . n A 1 261 GLU 261 259 259 GLU GLU A . n A 1 262 SER 262 260 260 SER SER A . n A 1 263 HIS 263 261 261 HIS HIS A . n A 1 264 THR 264 262 262 THR THR A . n A 1 265 GLU 265 263 263 GLU GLU A . n A 1 266 ASP 266 264 264 ASP ASP A . n A 1 267 PHE 267 265 265 PHE PHE A . n A 1 268 ALA 268 266 ? ? ? A . n A 1 269 LEU 269 267 ? ? ? A . n A 1 270 THR 270 268 ? ? ? A . n A 1 271 LEU 271 269 ? ? ? A . n A 1 272 SER 272 270 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AGO 1 300 300 AGO AGO A . C 3 MG 1 301 301 MG MG A . D 4 GOL 1 400 400 GOL GOL A . E 5 HOH 1 271 1 HOH HOH A . E 5 HOH 2 272 2 HOH HOH A . E 5 HOH 3 273 3 HOH HOH A . E 5 HOH 4 274 4 HOH HOH A . E 5 HOH 5 275 5 HOH HOH A . E 5 HOH 6 276 6 HOH HOH A . E 5 HOH 7 277 7 HOH HOH A . E 5 HOH 8 278 8 HOH HOH A . E 5 HOH 9 279 9 HOH HOH A . E 5 HOH 10 280 10 HOH HOH A . E 5 HOH 11 281 11 HOH HOH A . E 5 HOH 12 282 12 HOH HOH A . E 5 HOH 13 283 13 HOH HOH A . E 5 HOH 14 284 14 HOH HOH A . E 5 HOH 15 285 15 HOH HOH A . E 5 HOH 16 286 16 HOH HOH A . E 5 HOH 17 287 17 HOH HOH A . E 5 HOH 18 288 18 HOH HOH A . E 5 HOH 19 289 19 HOH HOH A . E 5 HOH 20 290 20 HOH HOH A . E 5 HOH 21 291 21 HOH HOH A . E 5 HOH 22 292 22 HOH HOH A . E 5 HOH 23 293 23 HOH HOH A . E 5 HOH 24 294 24 HOH HOH A . E 5 HOH 25 295 25 HOH HOH A . E 5 HOH 26 296 26 HOH HOH A . E 5 HOH 27 297 27 HOH HOH A . E 5 HOH 28 298 28 HOH HOH A . E 5 HOH 29 299 29 HOH HOH A . E 5 HOH 30 302 30 HOH HOH A . E 5 HOH 31 303 31 HOH HOH A . E 5 HOH 32 304 32 HOH HOH A . E 5 HOH 33 305 33 HOH HOH A . E 5 HOH 34 306 34 HOH HOH A . E 5 HOH 35 307 35 HOH HOH A . E 5 HOH 36 308 36 HOH HOH A . E 5 HOH 37 309 37 HOH HOH A . E 5 HOH 38 310 38 HOH HOH A . E 5 HOH 39 311 39 HOH HOH A . E 5 HOH 40 312 40 HOH HOH A . E 5 HOH 41 313 41 HOH HOH A . E 5 HOH 42 314 42 HOH HOH A . E 5 HOH 43 315 43 HOH HOH A . E 5 HOH 44 316 44 HOH HOH A . E 5 HOH 45 317 45 HOH HOH A . E 5 HOH 46 318 46 HOH HOH A . E 5 HOH 47 319 47 HOH HOH A . E 5 HOH 48 320 48 HOH HOH A . E 5 HOH 49 321 49 HOH HOH A . E 5 HOH 50 322 50 HOH HOH A . E 5 HOH 51 323 51 HOH HOH A . E 5 HOH 52 324 52 HOH HOH A . E 5 HOH 53 325 53 HOH HOH A . E 5 HOH 54 326 54 HOH HOH A . E 5 HOH 55 327 55 HOH HOH A . E 5 HOH 56 328 56 HOH HOH A . E 5 HOH 57 329 57 HOH HOH A . E 5 HOH 58 330 58 HOH HOH A . E 5 HOH 59 331 59 HOH HOH A . E 5 HOH 60 332 60 HOH HOH A . E 5 HOH 61 333 61 HOH HOH A . E 5 HOH 62 334 62 HOH HOH A . E 5 HOH 63 335 63 HOH HOH A . E 5 HOH 64 336 64 HOH HOH A . E 5 HOH 65 337 65 HOH HOH A . E 5 HOH 66 338 66 HOH HOH A . E 5 HOH 67 339 67 HOH HOH A . E 5 HOH 68 340 68 HOH HOH A . E 5 HOH 69 341 69 HOH HOH A . E 5 HOH 70 342 70 HOH HOH A . E 5 HOH 71 343 71 HOH HOH A . E 5 HOH 72 344 72 HOH HOH A . E 5 HOH 73 345 73 HOH HOH A . E 5 HOH 74 346 74 HOH HOH A . E 5 HOH 75 347 75 HOH HOH A . E 5 HOH 76 348 76 HOH HOH A . E 5 HOH 77 349 77 HOH HOH A . E 5 HOH 78 350 78 HOH HOH A . E 5 HOH 79 351 79 HOH HOH A . E 5 HOH 80 352 80 HOH HOH A . E 5 HOH 81 353 81 HOH HOH A . E 5 HOH 82 354 82 HOH HOH A . E 5 HOH 83 355 83 HOH HOH A . E 5 HOH 84 356 84 HOH HOH A . E 5 HOH 85 357 85 HOH HOH A . E 5 HOH 86 358 86 HOH HOH A . E 5 HOH 87 359 87 HOH HOH A . E 5 HOH 88 360 88 HOH HOH A . E 5 HOH 89 361 89 HOH HOH A . E 5 HOH 90 362 90 HOH HOH A . E 5 HOH 91 363 91 HOH HOH A . E 5 HOH 92 364 92 HOH HOH A . E 5 HOH 93 365 93 HOH HOH A . E 5 HOH 94 366 94 HOH HOH A . E 5 HOH 95 367 95 HOH HOH A . E 5 HOH 96 368 96 HOH HOH A . E 5 HOH 97 369 97 HOH HOH A . E 5 HOH 98 370 98 HOH HOH A . E 5 HOH 99 371 99 HOH HOH A . E 5 HOH 100 372 100 HOH HOH A . E 5 HOH 101 373 101 HOH HOH A . E 5 HOH 102 374 102 HOH HOH A . E 5 HOH 103 375 103 HOH HOH A . E 5 HOH 104 376 104 HOH HOH A . E 5 HOH 105 377 105 HOH HOH A . E 5 HOH 106 378 106 HOH HOH A . E 5 HOH 107 379 107 HOH HOH A . E 5 HOH 108 380 108 HOH HOH A . E 5 HOH 109 381 109 HOH HOH A . E 5 HOH 110 382 110 HOH HOH A . E 5 HOH 111 383 111 HOH HOH A . E 5 HOH 112 384 112 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG1 ? A THR 17 ? A THR 15 ? 1_555 MG ? C MG . ? A MG 301 ? 1_555 OG1 ? A THR 37 ? A THR 35 ? 1_555 82.8 ? 2 OG1 ? A THR 17 ? A THR 15 ? 1_555 MG ? C MG . ? A MG 301 ? 1_555 O2B ? B AGO . ? A AGO 300 ? 1_555 96.6 ? 3 OG1 ? A THR 37 ? A THR 35 ? 1_555 MG ? C MG . ? A MG 301 ? 1_555 O2B ? B AGO . ? A AGO 300 ? 1_555 176.4 ? 4 OG1 ? A THR 17 ? A THR 15 ? 1_555 MG ? C MG . ? A MG 301 ? 1_555 O1G ? B AGO . ? A AGO 300 ? 1_555 167.7 ? 5 OG1 ? A THR 37 ? A THR 35 ? 1_555 MG ? C MG . ? A MG 301 ? 1_555 O1G ? B AGO . ? A AGO 300 ? 1_555 87.3 ? 6 O2B ? B AGO . ? A AGO 300 ? 1_555 MG ? C MG . ? A MG 301 ? 1_555 O1G ? B AGO . ? A AGO 300 ? 1_555 92.8 ? 7 OG1 ? A THR 17 ? A THR 15 ? 1_555 MG ? C MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 369 ? 1_555 89.3 ? 8 OG1 ? A THR 37 ? A THR 35 ? 1_555 MG ? C MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 369 ? 1_555 90.0 ? 9 O2B ? B AGO . ? A AGO 300 ? 1_555 MG ? C MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 369 ? 1_555 93.5 ? 10 O1G ? B AGO . ? A AGO 300 ? 1_555 MG ? C MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 369 ? 1_555 98.1 ? 11 OG1 ? A THR 17 ? A THR 15 ? 1_555 MG ? C MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 370 ? 1_555 83.5 ? 12 OG1 ? A THR 37 ? A THR 35 ? 1_555 MG ? C MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 370 ? 1_555 90.2 ? 13 O2B ? B AGO . ? A AGO 300 ? 1_555 MG ? C MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 370 ? 1_555 86.2 ? 14 O1G ? B AGO . ? A AGO 300 ? 1_555 MG ? C MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 370 ? 1_555 89.2 ? 15 O ? E HOH . ? A HOH 369 ? 1_555 MG ? C MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 370 ? 1_555 172.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-03-09 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-08 4 'Structure model' 1 3 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' Advisory 4 3 'Structure model' 'Refinement description' 5 4 'Structure model' Advisory 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Database references' 8 4 'Structure model' 'Derived calculations' 9 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_unobs_or_zero_occ_atoms 2 3 'Structure model' software 3 4 'Structure model' chem_comp_atom 4 4 'Structure model' chem_comp_bond 5 4 'Structure model' database_2 6 4 'Structure model' pdbx_initial_refinement_model 7 4 'Structure model' pdbx_struct_conn_angle 8 4 'Structure model' pdbx_unobs_or_zero_occ_atoms 9 4 'Structure model' struct_conn 10 4 'Structure model' struct_ref_seq_dif 11 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.value' 16 4 'Structure model' '_struct_conn.pdbx_dist_value' 17 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 18 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 19 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 20 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 23 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 24 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 25 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 26 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 28 4 'Structure model' '_struct_ref_seq_dif.details' 29 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 30 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 31 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 8.1970 22.2890 21.8020 0.0414 0.0242 0.0211 0.0101 0.0105 -0.0121 3.4606 1.3862 1.7255 -0.0829 -0.9749 0.1525 0.0409 0.0253 -0.0661 -0.0777 0.1985 0.0004 -0.0029 -0.0354 -0.0062 'X-RAY DIFFRACTION' 2 ? refined 27.9150 12.7180 13.3230 0.0435 0.0414 0.0357 -0.0076 0.0234 -0.0144 2.0654 2.7781 2.0209 -0.1500 -0.2060 1.4004 0.0629 -0.0080 -0.0550 -0.1419 0.1252 -0.0122 0.0434 0.0023 0.0533 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 2 A 161 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 A 167 A 265 ? . . . . ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 4 REFMAC 5.5.0063 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 5 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 MAR345dtb . ? ? ? ? 'data collection' ? ? ? 7 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 8 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 30 ? ? -86.84 33.33 2 1 ASP A 215 ? ? -103.30 66.80 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 68 ? CG ? A LYS 70 CG 2 1 Y 1 A LYS 68 ? CD ? A LYS 70 CD 3 1 Y 1 A LYS 68 ? CE ? A LYS 70 CE 4 1 Y 1 A LYS 68 ? NZ ? A LYS 70 NZ 5 1 Y 1 A LYS 222 ? CD ? A LYS 224 CD 6 1 Y 1 A LYS 222 ? CE ? A LYS 224 CE 7 1 Y 1 A LYS 222 ? NZ ? A LYS 224 NZ 8 1 Y 1 A GLU 233 ? CG ? A GLU 235 CG 9 1 Y 1 A GLU 233 ? CD ? A GLU 235 CD 10 1 Y 1 A GLU 233 ? OE1 ? A GLU 235 OE1 11 1 Y 1 A GLU 233 ? OE2 ? A GLU 235 OE2 12 1 N 0 A AGO 300 ? "CM'" ? B AGO ? "CM'" 13 1 N 0 A AGO 300 ? "N2'" ? B AGO ? "N2'" 14 1 N 0 A AGO 300 ? "C2'" ? B AGO ? "C2'" 15 1 N 0 A AGO 300 ? "C3'" ? B AGO ? "C3'" 16 1 N 0 A AGO 300 ? "C4'" ? B AGO ? "C4'" 17 1 N 0 A AGO 300 ? "C5'" ? B AGO ? "C5'" 18 1 N 0 A AGO 300 ? "C6'" ? B AGO ? "C6'" 19 1 N 0 A AGO 300 ? "C1'" ? B AGO ? "C1'" 20 1 N 0 A AGO 300 ? "C'" ? B AGO ? "C'" 21 1 N 0 A AGO 300 ? "O1'" ? B AGO ? "O1'" # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -1 ? A GLY 1 2 1 Y 1 A SER 0 ? A SER 2 3 1 Y 1 A MET 1 ? A MET 3 4 1 Y 1 A SER 162 ? A SER 164 5 1 Y 1 A THR 163 ? A THR 165 6 1 Y 1 A VAL 164 ? A VAL 166 7 1 Y 1 A GLY 165 ? A GLY 167 8 1 Y 1 A ASP 166 ? A ASP 168 9 1 Y 1 A ALA 266 ? A ALA 268 10 1 Y 1 A LEU 267 ? A LEU 269 11 1 Y 1 A THR 268 ? A THR 270 12 1 Y 1 A LEU 269 ? A LEU 271 13 1 Y 1 A SER 270 ? A SER 272 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal AGO "CM'" C N N 1 AGO "N2'" N N N 2 AGO "C2'" C Y N 3 AGO "C3'" C Y N 4 AGO "C4'" C Y N 5 AGO "C5'" C Y N 6 AGO "C6'" C Y N 7 AGO "C1'" C Y N 8 AGO "C'" C N N 9 AGO "O1'" O N N 10 AGO "O3'" O N N 11 AGO C3B C N R 12 AGO C2B C N N 13 AGO "O2'" O N N 14 AGO C4B C N R 15 AGO C5B C N N 16 AGO "O5'" O N N 17 AGO PA P N R 18 AGO O1A O N N 19 AGO O2A O N N 20 AGO O3A O N N 21 AGO PB P N R 22 AGO O1B O N N 23 AGO O2B O N N 24 AGO N3B N N N 25 AGO PG P N N 26 AGO O2G O N N 27 AGO O3G O N N 28 AGO O1G O N N 29 AGO "O4'" O N N 30 AGO C1B C N R 31 AGO N9 N Y N 32 AGO C8 C Y N 33 AGO N7 N Y N 34 AGO C5 C Y N 35 AGO C4 C Y N 36 AGO N3 N N N 37 AGO C2 C N N 38 AGO N2 N N N 39 AGO N1 N N N 40 AGO C6 C N N 41 AGO O6 O N N 42 AGO "HM'" H N N 43 AGO "HM'A" H N N 44 AGO "HM'B" H N N 45 AGO "HN2'" H N N 46 AGO "H3'" H N N 47 AGO "H4'" H N N 48 AGO "H5'" H N N 49 AGO "H6'" H N N 50 AGO H3B H N N 51 AGO H4B H N N 52 AGO H5B H N N 53 AGO H5BA H N N 54 AGO HO1A H N N 55 AGO HO2B H N N 56 AGO HN3B H N N 57 AGO HO2G H N N 58 AGO HO3G H N N 59 AGO H1B H N N 60 AGO H8 H N N 61 AGO HN2 H N N 62 AGO HN2A H N N 63 AGO HN1 H N N 64 ALA N N N N 65 ALA CA C N S 66 ALA C C N N 67 ALA O O N N 68 ALA CB C N N 69 ALA OXT O N N 70 ALA H H N N 71 ALA H2 H N N 72 ALA HA H N N 73 ALA HB1 H N N 74 ALA HB2 H N N 75 ALA HB3 H N N 76 ALA HXT H N N 77 ARG N N N N 78 ARG CA C N S 79 ARG C C N N 80 ARG O O N N 81 ARG CB C N N 82 ARG CG C N N 83 ARG CD C N N 84 ARG NE N N N 85 ARG CZ C N N 86 ARG NH1 N N N 87 ARG NH2 N N N 88 ARG OXT O N N 89 ARG H H N N 90 ARG H2 H N N 91 ARG HA H N N 92 ARG HB2 H N N 93 ARG HB3 H N N 94 ARG HG2 H N N 95 ARG HG3 H N N 96 ARG HD2 H N N 97 ARG HD3 H N N 98 ARG HE H N N 99 ARG HH11 H N N 100 ARG HH12 H N N 101 ARG HH21 H N N 102 ARG HH22 H N N 103 ARG HXT H N N 104 ASN N N N N 105 ASN CA C N S 106 ASN C C N N 107 ASN O O N N 108 ASN CB C N N 109 ASN CG C N N 110 ASN OD1 O N N 111 ASN ND2 N N N 112 ASN OXT O N N 113 ASN H H N N 114 ASN H2 H N N 115 ASN HA H N N 116 ASN HB2 H N N 117 ASN HB3 H N N 118 ASN HD21 H N N 119 ASN HD22 H N N 120 ASN HXT H N N 121 ASP N N N N 122 ASP CA C N S 123 ASP C C N N 124 ASP O O N N 125 ASP CB C N N 126 ASP CG C N N 127 ASP OD1 O N N 128 ASP OD2 O N N 129 ASP OXT O N N 130 ASP H H N N 131 ASP H2 H N N 132 ASP HA H N N 133 ASP HB2 H N N 134 ASP HB3 H N N 135 ASP HD2 H N N 136 ASP HXT H N N 137 CYS N N N N 138 CYS CA C N R 139 CYS C C N N 140 CYS O O N N 141 CYS CB C N N 142 CYS SG S N N 143 CYS OXT O N N 144 CYS H H N N 145 CYS H2 H N N 146 CYS HA H N N 147 CYS HB2 H N N 148 CYS HB3 H N N 149 CYS HG H N N 150 CYS HXT H N N 151 GLN N N N N 152 GLN CA C N S 153 GLN C C N N 154 GLN O O N N 155 GLN CB C N N 156 GLN CG C N N 157 GLN CD C N N 158 GLN OE1 O N N 159 GLN NE2 N N N 160 GLN OXT O N N 161 GLN H H N N 162 GLN H2 H N N 163 GLN HA H N N 164 GLN HB2 H N N 165 GLN HB3 H N N 166 GLN HG2 H N N 167 GLN HG3 H N N 168 GLN HE21 H N N 169 GLN HE22 H N N 170 GLN HXT H N N 171 GLU N N N N 172 GLU CA C N S 173 GLU C C N N 174 GLU O O N N 175 GLU CB C N N 176 GLU CG C N N 177 GLU CD C N N 178 GLU OE1 O N N 179 GLU OE2 O N N 180 GLU OXT O N N 181 GLU H H N N 182 GLU H2 H N N 183 GLU HA H N N 184 GLU HB2 H N N 185 GLU HB3 H N N 186 GLU HG2 H N N 187 GLU HG3 H N N 188 GLU HE2 H N N 189 GLU HXT H N N 190 GLY N N N N 191 GLY CA C N N 192 GLY C C N N 193 GLY O O N N 194 GLY OXT O N N 195 GLY H H N N 196 GLY H2 H N N 197 GLY HA2 H N N 198 GLY HA3 H N N 199 GLY HXT H N N 200 GOL C1 C N N 201 GOL O1 O N N 202 GOL C2 C N N 203 GOL O2 O N N 204 GOL C3 C N N 205 GOL O3 O N N 206 GOL H11 H N N 207 GOL H12 H N N 208 GOL HO1 H N N 209 GOL H2 H N N 210 GOL HO2 H N N 211 GOL H31 H N N 212 GOL H32 H N N 213 GOL HO3 H N N 214 HIS N N N N 215 HIS CA C N S 216 HIS C C N N 217 HIS O O N N 218 HIS CB C N N 219 HIS CG C Y N 220 HIS ND1 N Y N 221 HIS CD2 C Y N 222 HIS CE1 C Y N 223 HIS NE2 N Y N 224 HIS OXT O N N 225 HIS H H N N 226 HIS H2 H N N 227 HIS HA H N N 228 HIS HB2 H N N 229 HIS HB3 H N N 230 HIS HD1 H N N 231 HIS HD2 H N N 232 HIS HE1 H N N 233 HIS HE2 H N N 234 HIS HXT H N N 235 HOH O O N N 236 HOH H1 H N N 237 HOH H2 H N N 238 ILE N N N N 239 ILE CA C N S 240 ILE C C N N 241 ILE O O N N 242 ILE CB C N S 243 ILE CG1 C N N 244 ILE CG2 C N N 245 ILE CD1 C N N 246 ILE OXT O N N 247 ILE H H N N 248 ILE H2 H N N 249 ILE HA H N N 250 ILE HB H N N 251 ILE HG12 H N N 252 ILE HG13 H N N 253 ILE HG21 H N N 254 ILE HG22 H N N 255 ILE HG23 H N N 256 ILE HD11 H N N 257 ILE HD12 H N N 258 ILE HD13 H N N 259 ILE HXT H N N 260 LEU N N N N 261 LEU CA C N S 262 LEU C C N N 263 LEU O O N N 264 LEU CB C N N 265 LEU CG C N N 266 LEU CD1 C N N 267 LEU CD2 C N N 268 LEU OXT O N N 269 LEU H H N N 270 LEU H2 H N N 271 LEU HA H N N 272 LEU HB2 H N N 273 LEU HB3 H N N 274 LEU HG H N N 275 LEU HD11 H N N 276 LEU HD12 H N N 277 LEU HD13 H N N 278 LEU HD21 H N N 279 LEU HD22 H N N 280 LEU HD23 H N N 281 LEU HXT H N N 282 LYS N N N N 283 LYS CA C N S 284 LYS C C N N 285 LYS O O N N 286 LYS CB C N N 287 LYS CG C N N 288 LYS CD C N N 289 LYS CE C N N 290 LYS NZ N N N 291 LYS OXT O N N 292 LYS H H N N 293 LYS H2 H N N 294 LYS HA H N N 295 LYS HB2 H N N 296 LYS HB3 H N N 297 LYS HG2 H N N 298 LYS HG3 H N N 299 LYS HD2 H N N 300 LYS HD3 H N N 301 LYS HE2 H N N 302 LYS HE3 H N N 303 LYS HZ1 H N N 304 LYS HZ2 H N N 305 LYS HZ3 H N N 306 LYS HXT H N N 307 MET N N N N 308 MET CA C N S 309 MET C C N N 310 MET O O N N 311 MET CB C N N 312 MET CG C N N 313 MET SD S N N 314 MET CE C N N 315 MET OXT O N N 316 MET H H N N 317 MET H2 H N N 318 MET HA H N N 319 MET HB2 H N N 320 MET HB3 H N N 321 MET HG2 H N N 322 MET HG3 H N N 323 MET HE1 H N N 324 MET HE2 H N N 325 MET HE3 H N N 326 MET HXT H N N 327 MG MG MG N N 328 PHE N N N N 329 PHE CA C N S 330 PHE C C N N 331 PHE O O N N 332 PHE CB C N N 333 PHE CG C Y N 334 PHE CD1 C Y N 335 PHE CD2 C Y N 336 PHE CE1 C Y N 337 PHE CE2 C Y N 338 PHE CZ C Y N 339 PHE OXT O N N 340 PHE H H N N 341 PHE H2 H N N 342 PHE HA H N N 343 PHE HB2 H N N 344 PHE HB3 H N N 345 PHE HD1 H N N 346 PHE HD2 H N N 347 PHE HE1 H N N 348 PHE HE2 H N N 349 PHE HZ H N N 350 PHE HXT H N N 351 PRO N N N N 352 PRO CA C N S 353 PRO C C N N 354 PRO O O N N 355 PRO CB C N N 356 PRO CG C N N 357 PRO CD C N N 358 PRO OXT O N N 359 PRO H H N N 360 PRO HA H N N 361 PRO HB2 H N N 362 PRO HB3 H N N 363 PRO HG2 H N N 364 PRO HG3 H N N 365 PRO HD2 H N N 366 PRO HD3 H N N 367 PRO HXT H N N 368 SER N N N N 369 SER CA C N S 370 SER C C N N 371 SER O O N N 372 SER CB C N N 373 SER OG O N N 374 SER OXT O N N 375 SER H H N N 376 SER H2 H N N 377 SER HA H N N 378 SER HB2 H N N 379 SER HB3 H N N 380 SER HG H N N 381 SER HXT H N N 382 THR N N N N 383 THR CA C N S 384 THR C C N N 385 THR O O N N 386 THR CB C N R 387 THR OG1 O N N 388 THR CG2 C N N 389 THR OXT O N N 390 THR H H N N 391 THR H2 H N N 392 THR HA H N N 393 THR HB H N N 394 THR HG1 H N N 395 THR HG21 H N N 396 THR HG22 H N N 397 THR HG23 H N N 398 THR HXT H N N 399 TRP N N N N 400 TRP CA C N S 401 TRP C C N N 402 TRP O O N N 403 TRP CB C N N 404 TRP CG C Y N 405 TRP CD1 C Y N 406 TRP CD2 C Y N 407 TRP NE1 N Y N 408 TRP CE2 C Y N 409 TRP CE3 C Y N 410 TRP CZ2 C Y N 411 TRP CZ3 C Y N 412 TRP CH2 C Y N 413 TRP OXT O N N 414 TRP H H N N 415 TRP H2 H N N 416 TRP HA H N N 417 TRP HB2 H N N 418 TRP HB3 H N N 419 TRP HD1 H N N 420 TRP HE1 H N N 421 TRP HE3 H N N 422 TRP HZ2 H N N 423 TRP HZ3 H N N 424 TRP HH2 H N N 425 TRP HXT H N N 426 TYR N N N N 427 TYR CA C N S 428 TYR C C N N 429 TYR O O N N 430 TYR CB C N N 431 TYR CG C Y N 432 TYR CD1 C Y N 433 TYR CD2 C Y N 434 TYR CE1 C Y N 435 TYR CE2 C Y N 436 TYR CZ C Y N 437 TYR OH O N N 438 TYR OXT O N N 439 TYR H H N N 440 TYR H2 H N N 441 TYR HA H N N 442 TYR HB2 H N N 443 TYR HB3 H N N 444 TYR HD1 H N N 445 TYR HD2 H N N 446 TYR HE1 H N N 447 TYR HE2 H N N 448 TYR HH H N N 449 TYR HXT H N N 450 VAL N N N N 451 VAL CA C N S 452 VAL C C N N 453 VAL O O N N 454 VAL CB C N N 455 VAL CG1 C N N 456 VAL CG2 C N N 457 VAL OXT O N N 458 VAL H H N N 459 VAL H2 H N N 460 VAL HA H N N 461 VAL HB H N N 462 VAL HG11 H N N 463 VAL HG12 H N N 464 VAL HG13 H N N 465 VAL HG21 H N N 466 VAL HG22 H N N 467 VAL HG23 H N N 468 VAL HXT H N N 469 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal AGO "CM'" "N2'" sing N N 1 AGO "N2'" "C2'" sing N N 2 AGO "C2'" "C3'" doub Y N 3 AGO "C2'" "C1'" sing Y N 4 AGO "C3'" "C4'" sing Y N 5 AGO "C4'" "C5'" doub Y N 6 AGO "C5'" "C6'" sing Y N 7 AGO "C6'" "C1'" doub Y N 8 AGO "C1'" "C'" sing N N 9 AGO "C'" "O1'" doub N N 10 AGO "C'" "O3'" sing N N 11 AGO "O3'" C3B sing N N 12 AGO C3B C2B sing N N 13 AGO C3B C4B sing N N 14 AGO C2B "O2'" doub N N 15 AGO C2B C1B sing N N 16 AGO C4B C5B sing N N 17 AGO C4B "O4'" sing N N 18 AGO C5B "O5'" sing N N 19 AGO "O5'" PA sing N N 20 AGO PA O1A sing N N 21 AGO PA O2A doub N N 22 AGO PA O3A sing N N 23 AGO O3A PB sing N N 24 AGO PB O1B doub N N 25 AGO PB O2B sing N N 26 AGO PB N3B sing N N 27 AGO N3B PG sing N N 28 AGO PG O2G sing N N 29 AGO PG O3G sing N N 30 AGO PG O1G doub N N 31 AGO "O4'" C1B sing N N 32 AGO C1B N9 sing N N 33 AGO N9 C8 sing Y N 34 AGO N9 C4 sing Y N 35 AGO C8 N7 doub Y N 36 AGO N7 C5 sing Y N 37 AGO C5 C4 doub Y N 38 AGO C5 C6 sing N N 39 AGO C4 N3 sing N N 40 AGO N3 C2 doub N N 41 AGO C2 N2 sing N N 42 AGO C2 N1 sing N N 43 AGO N1 C6 sing N N 44 AGO C6 O6 doub N N 45 AGO "CM'" "HM'" sing N N 46 AGO "CM'" "HM'A" sing N N 47 AGO "CM'" "HM'B" sing N N 48 AGO "N2'" "HN2'" sing N N 49 AGO "C3'" "H3'" sing N N 50 AGO "C4'" "H4'" sing N N 51 AGO "C5'" "H5'" sing N N 52 AGO "C6'" "H6'" sing N N 53 AGO C3B H3B sing N N 54 AGO C4B H4B sing N N 55 AGO C5B H5B sing N N 56 AGO C5B H5BA sing N N 57 AGO O1A HO1A sing N N 58 AGO O2B HO2B sing N N 59 AGO N3B HN3B sing N N 60 AGO O2G HO2G sing N N 61 AGO O3G HO3G sing N N 62 AGO C1B H1B sing N N 63 AGO C8 H8 sing N N 64 AGO N2 HN2 sing N N 65 AGO N2 HN2A sing N N 66 AGO N1 HN1 sing N N 67 ALA N CA sing N N 68 ALA N H sing N N 69 ALA N H2 sing N N 70 ALA CA C sing N N 71 ALA CA CB sing N N 72 ALA CA HA sing N N 73 ALA C O doub N N 74 ALA C OXT sing N N 75 ALA CB HB1 sing N N 76 ALA CB HB2 sing N N 77 ALA CB HB3 sing N N 78 ALA OXT HXT sing N N 79 ARG N CA sing N N 80 ARG N H sing N N 81 ARG N H2 sing N N 82 ARG CA C sing N N 83 ARG CA CB sing N N 84 ARG CA HA sing N N 85 ARG C O doub N N 86 ARG C OXT sing N N 87 ARG CB CG sing N N 88 ARG CB HB2 sing N N 89 ARG CB HB3 sing N N 90 ARG CG CD sing N N 91 ARG CG HG2 sing N N 92 ARG CG HG3 sing N N 93 ARG CD NE sing N N 94 ARG CD HD2 sing N N 95 ARG CD HD3 sing N N 96 ARG NE CZ sing N N 97 ARG NE HE sing N N 98 ARG CZ NH1 sing N N 99 ARG CZ NH2 doub N N 100 ARG NH1 HH11 sing N N 101 ARG NH1 HH12 sing N N 102 ARG NH2 HH21 sing N N 103 ARG NH2 HH22 sing N N 104 ARG OXT HXT sing N N 105 ASN N CA sing N N 106 ASN N H sing N N 107 ASN N H2 sing N N 108 ASN CA C sing N N 109 ASN CA CB sing N N 110 ASN CA HA sing N N 111 ASN C O doub N N 112 ASN C OXT sing N N 113 ASN CB CG sing N N 114 ASN CB HB2 sing N N 115 ASN CB HB3 sing N N 116 ASN CG OD1 doub N N 117 ASN CG ND2 sing N N 118 ASN ND2 HD21 sing N N 119 ASN ND2 HD22 sing N N 120 ASN OXT HXT sing N N 121 ASP N CA sing N N 122 ASP N H sing N N 123 ASP N H2 sing N N 124 ASP CA C sing N N 125 ASP CA CB sing N N 126 ASP CA HA sing N N 127 ASP C O doub N N 128 ASP C OXT sing N N 129 ASP CB CG sing N N 130 ASP CB HB2 sing N N 131 ASP CB HB3 sing N N 132 ASP CG OD1 doub N N 133 ASP CG OD2 sing N N 134 ASP OD2 HD2 sing N N 135 ASP OXT HXT sing N N 136 CYS N CA sing N N 137 CYS N H sing N N 138 CYS N H2 sing N N 139 CYS CA C sing N N 140 CYS CA CB sing N N 141 CYS CA HA sing N N 142 CYS C O doub N N 143 CYS C OXT sing N N 144 CYS CB SG sing N N 145 CYS CB HB2 sing N N 146 CYS CB HB3 sing N N 147 CYS SG HG sing N N 148 CYS OXT HXT sing N N 149 GLN N CA sing N N 150 GLN N H sing N N 151 GLN N H2 sing N N 152 GLN CA C sing N N 153 GLN CA CB sing N N 154 GLN CA HA sing N N 155 GLN C O doub N N 156 GLN C OXT sing N N 157 GLN CB CG sing N N 158 GLN CB HB2 sing N N 159 GLN CB HB3 sing N N 160 GLN CG CD sing N N 161 GLN CG HG2 sing N N 162 GLN CG HG3 sing N N 163 GLN CD OE1 doub N N 164 GLN CD NE2 sing N N 165 GLN NE2 HE21 sing N N 166 GLN NE2 HE22 sing N N 167 GLN OXT HXT sing N N 168 GLU N CA sing N N 169 GLU N H sing N N 170 GLU N H2 sing N N 171 GLU CA C sing N N 172 GLU CA CB sing N N 173 GLU CA HA sing N N 174 GLU C O doub N N 175 GLU C OXT sing N N 176 GLU CB CG sing N N 177 GLU CB HB2 sing N N 178 GLU CB HB3 sing N N 179 GLU CG CD sing N N 180 GLU CG HG2 sing N N 181 GLU CG HG3 sing N N 182 GLU CD OE1 doub N N 183 GLU CD OE2 sing N N 184 GLU OE2 HE2 sing N N 185 GLU OXT HXT sing N N 186 GLY N CA sing N N 187 GLY N H sing N N 188 GLY N H2 sing N N 189 GLY CA C sing N N 190 GLY CA HA2 sing N N 191 GLY CA HA3 sing N N 192 GLY C O doub N N 193 GLY C OXT sing N N 194 GLY OXT HXT sing N N 195 GOL C1 O1 sing N N 196 GOL C1 C2 sing N N 197 GOL C1 H11 sing N N 198 GOL C1 H12 sing N N 199 GOL O1 HO1 sing N N 200 GOL C2 O2 sing N N 201 GOL C2 C3 sing N N 202 GOL C2 H2 sing N N 203 GOL O2 HO2 sing N N 204 GOL C3 O3 sing N N 205 GOL C3 H31 sing N N 206 GOL C3 H32 sing N N 207 GOL O3 HO3 sing N N 208 HIS N CA sing N N 209 HIS N H sing N N 210 HIS N H2 sing N N 211 HIS CA C sing N N 212 HIS CA CB sing N N 213 HIS CA HA sing N N 214 HIS C O doub N N 215 HIS C OXT sing N N 216 HIS CB CG sing N N 217 HIS CB HB2 sing N N 218 HIS CB HB3 sing N N 219 HIS CG ND1 sing Y N 220 HIS CG CD2 doub Y N 221 HIS ND1 CE1 doub Y N 222 HIS ND1 HD1 sing N N 223 HIS CD2 NE2 sing Y N 224 HIS CD2 HD2 sing N N 225 HIS CE1 NE2 sing Y N 226 HIS CE1 HE1 sing N N 227 HIS NE2 HE2 sing N N 228 HIS OXT HXT sing N N 229 HOH O H1 sing N N 230 HOH O H2 sing N N 231 ILE N CA sing N N 232 ILE N H sing N N 233 ILE N H2 sing N N 234 ILE CA C sing N N 235 ILE CA CB sing N N 236 ILE CA HA sing N N 237 ILE C O doub N N 238 ILE C OXT sing N N 239 ILE CB CG1 sing N N 240 ILE CB CG2 sing N N 241 ILE CB HB sing N N 242 ILE CG1 CD1 sing N N 243 ILE CG1 HG12 sing N N 244 ILE CG1 HG13 sing N N 245 ILE CG2 HG21 sing N N 246 ILE CG2 HG22 sing N N 247 ILE CG2 HG23 sing N N 248 ILE CD1 HD11 sing N N 249 ILE CD1 HD12 sing N N 250 ILE CD1 HD13 sing N N 251 ILE OXT HXT sing N N 252 LEU N CA sing N N 253 LEU N H sing N N 254 LEU N H2 sing N N 255 LEU CA C sing N N 256 LEU CA CB sing N N 257 LEU CA HA sing N N 258 LEU C O doub N N 259 LEU C OXT sing N N 260 LEU CB CG sing N N 261 LEU CB HB2 sing N N 262 LEU CB HB3 sing N N 263 LEU CG CD1 sing N N 264 LEU CG CD2 sing N N 265 LEU CG HG sing N N 266 LEU CD1 HD11 sing N N 267 LEU CD1 HD12 sing N N 268 LEU CD1 HD13 sing N N 269 LEU CD2 HD21 sing N N 270 LEU CD2 HD22 sing N N 271 LEU CD2 HD23 sing N N 272 LEU OXT HXT sing N N 273 LYS N CA sing N N 274 LYS N H sing N N 275 LYS N H2 sing N N 276 LYS CA C sing N N 277 LYS CA CB sing N N 278 LYS CA HA sing N N 279 LYS C O doub N N 280 LYS C OXT sing N N 281 LYS CB CG sing N N 282 LYS CB HB2 sing N N 283 LYS CB HB3 sing N N 284 LYS CG CD sing N N 285 LYS CG HG2 sing N N 286 LYS CG HG3 sing N N 287 LYS CD CE sing N N 288 LYS CD HD2 sing N N 289 LYS CD HD3 sing N N 290 LYS CE NZ sing N N 291 LYS CE HE2 sing N N 292 LYS CE HE3 sing N N 293 LYS NZ HZ1 sing N N 294 LYS NZ HZ2 sing N N 295 LYS NZ HZ3 sing N N 296 LYS OXT HXT sing N N 297 MET N CA sing N N 298 MET N H sing N N 299 MET N H2 sing N N 300 MET CA C sing N N 301 MET CA CB sing N N 302 MET CA HA sing N N 303 MET C O doub N N 304 MET C OXT sing N N 305 MET CB CG sing N N 306 MET CB HB2 sing N N 307 MET CB HB3 sing N N 308 MET CG SD sing N N 309 MET CG HG2 sing N N 310 MET CG HG3 sing N N 311 MET SD CE sing N N 312 MET CE HE1 sing N N 313 MET CE HE2 sing N N 314 MET CE HE3 sing N N 315 MET OXT HXT sing N N 316 PHE N CA sing N N 317 PHE N H sing N N 318 PHE N H2 sing N N 319 PHE CA C sing N N 320 PHE CA CB sing N N 321 PHE CA HA sing N N 322 PHE C O doub N N 323 PHE C OXT sing N N 324 PHE CB CG sing N N 325 PHE CB HB2 sing N N 326 PHE CB HB3 sing N N 327 PHE CG CD1 doub Y N 328 PHE CG CD2 sing Y N 329 PHE CD1 CE1 sing Y N 330 PHE CD1 HD1 sing N N 331 PHE CD2 CE2 doub Y N 332 PHE CD2 HD2 sing N N 333 PHE CE1 CZ doub Y N 334 PHE CE1 HE1 sing N N 335 PHE CE2 CZ sing Y N 336 PHE CE2 HE2 sing N N 337 PHE CZ HZ sing N N 338 PHE OXT HXT sing N N 339 PRO N CA sing N N 340 PRO N CD sing N N 341 PRO N H sing N N 342 PRO CA C sing N N 343 PRO CA CB sing N N 344 PRO CA HA sing N N 345 PRO C O doub N N 346 PRO C OXT sing N N 347 PRO CB CG sing N N 348 PRO CB HB2 sing N N 349 PRO CB HB3 sing N N 350 PRO CG CD sing N N 351 PRO CG HG2 sing N N 352 PRO CG HG3 sing N N 353 PRO CD HD2 sing N N 354 PRO CD HD3 sing N N 355 PRO OXT HXT sing N N 356 SER N CA sing N N 357 SER N H sing N N 358 SER N H2 sing N N 359 SER CA C sing N N 360 SER CA CB sing N N 361 SER CA HA sing N N 362 SER C O doub N N 363 SER C OXT sing N N 364 SER CB OG sing N N 365 SER CB HB2 sing N N 366 SER CB HB3 sing N N 367 SER OG HG sing N N 368 SER OXT HXT sing N N 369 THR N CA sing N N 370 THR N H sing N N 371 THR N H2 sing N N 372 THR CA C sing N N 373 THR CA CB sing N N 374 THR CA HA sing N N 375 THR C O doub N N 376 THR C OXT sing N N 377 THR CB OG1 sing N N 378 THR CB CG2 sing N N 379 THR CB HB sing N N 380 THR OG1 HG1 sing N N 381 THR CG2 HG21 sing N N 382 THR CG2 HG22 sing N N 383 THR CG2 HG23 sing N N 384 THR OXT HXT sing N N 385 TRP N CA sing N N 386 TRP N H sing N N 387 TRP N H2 sing N N 388 TRP CA C sing N N 389 TRP CA CB sing N N 390 TRP CA HA sing N N 391 TRP C O doub N N 392 TRP C OXT sing N N 393 TRP CB CG sing N N 394 TRP CB HB2 sing N N 395 TRP CB HB3 sing N N 396 TRP CG CD1 doub Y N 397 TRP CG CD2 sing Y N 398 TRP CD1 NE1 sing Y N 399 TRP CD1 HD1 sing N N 400 TRP CD2 CE2 doub Y N 401 TRP CD2 CE3 sing Y N 402 TRP NE1 CE2 sing Y N 403 TRP NE1 HE1 sing N N 404 TRP CE2 CZ2 sing Y N 405 TRP CE3 CZ3 doub Y N 406 TRP CE3 HE3 sing N N 407 TRP CZ2 CH2 doub Y N 408 TRP CZ2 HZ2 sing N N 409 TRP CZ3 CH2 sing Y N 410 TRP CZ3 HZ3 sing N N 411 TRP CH2 HH2 sing N N 412 TRP OXT HXT sing N N 413 TYR N CA sing N N 414 TYR N H sing N N 415 TYR N H2 sing N N 416 TYR CA C sing N N 417 TYR CA CB sing N N 418 TYR CA HA sing N N 419 TYR C O doub N N 420 TYR C OXT sing N N 421 TYR CB CG sing N N 422 TYR CB HB2 sing N N 423 TYR CB HB3 sing N N 424 TYR CG CD1 doub Y N 425 TYR CG CD2 sing Y N 426 TYR CD1 CE1 sing Y N 427 TYR CD1 HD1 sing N N 428 TYR CD2 CE2 doub Y N 429 TYR CD2 HD2 sing N N 430 TYR CE1 CZ doub Y N 431 TYR CE1 HE1 sing N N 432 TYR CE2 CZ sing Y N 433 TYR CE2 HE2 sing N N 434 TYR CZ OH sing N N 435 TYR OH HH sing N N 436 TYR OXT HXT sing N N 437 VAL N CA sing N N 438 VAL N H sing N N 439 VAL N H2 sing N N 440 VAL CA C sing N N 441 VAL CA CB sing N N 442 VAL CA HA sing N N 443 VAL C O doub N N 444 VAL C OXT sing N N 445 VAL CB CG1 sing N N 446 VAL CB CG2 sing N N 447 VAL CB HB sing N N 448 VAL CG1 HG11 sing N N 449 VAL CG1 HG12 sing N N 450 VAL CG1 HG13 sing N N 451 VAL CG2 HG21 sing N N 452 VAL CG2 HG22 sing N N 453 VAL CG2 HG23 sing N N 454 VAL OXT HXT sing N N 455 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;2-amino-9-(5-O-[(R)-hydroxy{[(R)-hydroxy(phosphonoamino)phosphoryl]oxy}phosphoryl]-3-O-{[2-(methylamino)phenyl]carbonyl}-beta-D-erythro-pentofuranosyl-2-ulose)-1,9-dihydro-6H-purin-6-one ; AGO 3 'MAGNESIUM ION' MG 4 GLYCEROL GOL 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3HYR _pdbx_initial_refinement_model.details ? #