HEADER METAL TRANSPORT 24-FEB-10 3LX8 TITLE CRYSTAL STRUCTURE OF GDP-BOUND NFEOB FROM S. THERMOPHILUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: FERROUS IRON UPTAKE TRANSPORTER PROTEIN B; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CYTOPLASMIC DOMAINS; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 264199; SOURCE 4 STRAIN: LMG 18311; SOURCE 5 GENE: FEOB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX-4T-1 KEYWDS G PROTEIN, IRON TRANSPORT, GTP-BINDING, GTPASE, TRANSMEMBRANE, METAL KEYWDS 2 TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR M.R.ASH,A.GUILFOYLE,M.J.MAHER,R.J.CLARKE,J.M.GUSS,M.JORMAKKA REVDAT 5 01-NOV-23 3LX8 1 REMARK SEQADV REVDAT 4 08-NOV-17 3LX8 1 REMARK REVDAT 3 13-JUL-11 3LX8 1 VERSN REVDAT 2 09-JUN-10 3LX8 1 JRNL REVDAT 1 09-MAR-10 3LX8 0 JRNL AUTH M.R.ASH,A.GUILFOYLE,R.J.CLARKE,J.M.GUSS,M.J.MAHER,M.JORMAKKA JRNL TITL POTASSIUM-ACTIVATED GTPASE REACTION IN THE G PROTEIN-COUPLED JRNL TITL 2 FERROUS IRON TRANSPORTER B. JRNL REF J.BIOL.CHEM. V. 285 14594 2010 JRNL REFN ISSN 0021-9258 JRNL PMID 20220129 JRNL DOI 10.1074/JBC.M110.111914 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0063 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : -3.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 6427 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.245 REMARK 3 R VALUE (WORKING SET) : 0.239 REMARK 3 FREE R VALUE : 0.298 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.800 REMARK 3 FREE R VALUE TEST SET COUNT : 631 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.97 REMARK 3 REFLECTION IN BIN (WORKING SET) : 338 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 84.04 REMARK 3 BIN R VALUE (WORKING SET) : 0.3480 REMARK 3 BIN FREE R VALUE SET COUNT : 36 REMARK 3 BIN FREE R VALUE : 0.4110 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1928 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 28 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 66.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.55000 REMARK 3 B22 (A**2) : -2.55000 REMARK 3 B33 (A**2) : 5.11000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.522 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.419 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 47.870 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.913 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.875 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1993 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2729 ; 1.494 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 259 ; 3.478 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 80 ;35.846 ;25.375 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 314 ;15.198 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;13.349 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 338 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1478 ; 0.003 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1290 ; 0.525 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2082 ; 0.968 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 703 ; 0.791 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 647 ; 1.287 ; 4.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 258 REMARK 3 ORIGIN FOR THE GROUP (A): 5.5060 15.2140 -16.7220 REMARK 3 T TENSOR REMARK 3 T11: 0.2373 T22: 0.2541 REMARK 3 T33: 0.1912 T12: -0.0157 REMARK 3 T13: 0.0168 T23: -0.0707 REMARK 3 L TENSOR REMARK 3 L11: 2.0603 L22: 1.0452 REMARK 3 L33: 2.1377 L12: -0.1504 REMARK 3 L13: -1.0643 L23: -0.0051 REMARK 3 S TENSOR REMARK 3 S11: 0.1358 S12: -0.2141 S13: 0.1115 REMARK 3 S21: -0.1174 S22: -0.1401 S23: 0.0428 REMARK 3 S31: -0.2403 S32: 0.1335 S33: 0.0044 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 3LX8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 03-MAR-10. REMARK 100 THE DEPOSITION ID IS D_1000057843. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-DEC-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5412 REMARK 200 MONOCHROMATOR : VARIMAX HF REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 6494 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.13300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 71.1 REMARK 200 DATA REDUNDANCY IN SHELL : 2.60 REMARK 200 R MERGE FOR SHELL (I) : 0.41400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3LX5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M NACL, 0.1M BIS-TRIS PH 5.5, 25% REMARK 280 (W/V) PEG 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 141.05000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 21.40000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 21.40000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 70.52500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 21.40000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 21.40000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 211.57500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 21.40000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 21.40000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 70.52500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 21.40000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 21.40000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 211.57500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 141.05000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 GLU A 259 REMARK 465 SER A 260 REMARK 465 HIS A 261 REMARK 465 THR A 262 REMARK 465 GLU A 263 REMARK 465 ASP A 264 REMARK 465 PHE A 265 REMARK 465 ALA A 266 REMARK 465 LEU A 267 REMARK 465 THR A 268 REMARK 465 LEU A 269 REMARK 465 SER A 270 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 6 CG CD1 CD2 REMARK 470 ARG A 27 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 44 CD CE NZ REMARK 470 LYS A 45 CE NZ REMARK 470 LYS A 47 CG CD CE NZ REMARK 470 LYS A 68 CG CD CE NZ REMARK 470 GLN A 77 CG CD OE1 NE2 REMARK 470 ARG A 78 CD NE CZ NH1 NH2 REMARK 470 GLU A 92 CG CD OE1 OE2 REMARK 470 ARG A 93 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 123 CG CD CE NZ REMARK 470 LYS A 124 CG CD CE NZ REMARK 470 LYS A 129 CG CD CE NZ REMARK 470 LYS A 155 CG CD CE NZ REMARK 470 ASP A 166 CG OD1 OD2 REMARK 470 GLN A 193 CG CD OE1 NE2 REMARK 470 GLU A 213 CG CD OE1 OE2 REMARK 470 ASP A 215 CG OD1 OD2 REMARK 470 GLN A 218 CG CD OE1 NE2 REMARK 470 LYS A 222 CD CE NZ REMARK 470 GLU A 240 CG CD OE1 OE2 REMARK 470 GLU A 252 CG CD OE1 OE2 REMARK 470 GLN A 256 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 25 47.42 -75.02 REMARK 500 THR A 35 43.12 -86.12 REMARK 500 TYR A 63 -72.53 -93.05 REMARK 500 ASN A 90 56.41 -117.21 REMARK 500 LEU A 144 -72.36 -73.47 REMARK 500 THR A 159 77.80 -109.56 REMARK 500 GLU A 213 45.38 -99.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP A 300 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3LX5 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MGMPPNP-BOUND NFEOB FROM S. THERMOPHILUS DBREF 3LX8 A 1 270 UNP Q5M586 Q5M586_STRT2 1 270 SEQADV 3LX8 GLY A -1 UNP Q5M586 EXPRESSION TAG SEQADV 3LX8 SER A 0 UNP Q5M586 EXPRESSION TAG SEQRES 1 A 272 GLY SER MET THR GLU ILE ALA LEU ILE GLY ASN PRO ASN SEQRES 2 A 272 SER GLY LYS THR SER LEU PHE ASN LEU ILE THR GLY HIS SEQRES 3 A 272 ASN GLN ARG VAL GLY ASN TRP PRO GLY VAL THR VAL GLU SEQRES 4 A 272 ARG LYS SER GLY LEU VAL LYS LYS ASN LYS ASP LEU GLU SEQRES 5 A 272 ILE GLN ASP LEU PRO GLY ILE TYR SER MET SER PRO TYR SEQRES 6 A 272 SER PRO GLU GLU LYS VAL ALA ARG ASP TYR LEU LEU SER SEQRES 7 A 272 GLN ARG ALA ASP SER ILE LEU ASN VAL VAL ASP ALA THR SEQRES 8 A 272 ASN LEU GLU ARG ASN LEU TYR LEU THR THR GLN LEU ILE SEQRES 9 A 272 GLU THR GLY ILE PRO VAL THR ILE ALA LEU ASN MET ILE SEQRES 10 A 272 ASP VAL LEU ASP GLY GLN GLY LYS LYS ILE ASN VAL ASP SEQRES 11 A 272 LYS LEU SER TYR HIS LEU GLY VAL PRO VAL VAL ALA THR SEQRES 12 A 272 SER ALA LEU LYS GLN THR GLY VAL ASP GLN VAL VAL LYS SEQRES 13 A 272 LYS ALA ALA HIS THR THR THR SER THR VAL GLY ASP LEU SEQRES 14 A 272 ALA PHE PRO ILE TYR ASP ASP ARG LEU GLU ALA ALA ILE SEQRES 15 A 272 SER GLN ILE LEU GLU VAL LEU GLY ASN SER VAL PRO GLN SEQRES 16 A 272 ARG SER ALA ARG PHE TYR ALA ILE LYS LEU PHE GLU GLN SEQRES 17 A 272 ASP SER LEU VAL GLU ALA GLU LEU ASP LEU SER GLN PHE SEQRES 18 A 272 GLN ARG LYS GLU ILE GLU ASP ILE ILE ARG ILE THR GLU SEQRES 19 A 272 GLU ILE PHE THR GLU ASP ALA GLU SER ILE VAL ILE ASN SEQRES 20 A 272 GLU ARG TYR ALA PHE ILE GLU ARG VAL CYS GLN MET ALA SEQRES 21 A 272 GLU SER HIS THR GLU ASP PHE ALA LEU THR LEU SER HET GDP A 300 28 HETNAM GDP GUANOSINE-5'-DIPHOSPHATE FORMUL 2 GDP C10 H15 N5 O11 P2 HELIX 1 1 GLY A 13 GLY A 23 1 11 HELIX 2 2 SER A 64 SER A 76 1 13 HELIX 3 3 ASN A 90 GLU A 103 1 14 HELIX 4 4 MET A 114 GLY A 122 1 9 HELIX 5 5 ASN A 126 GLY A 135 1 10 HELIX 6 6 GLY A 148 THR A 159 1 12 HELIX 7 7 ASP A 173 GLY A 188 1 16 HELIX 8 8 SER A 195 GLU A 205 1 11 HELIX 9 9 ASP A 207 GLU A 213 1 7 HELIX 10 10 SER A 217 THR A 236 1 20 HELIX 11 11 ASP A 238 CYS A 255 1 18 SHEET 1 A 7 GLN A 26 ASN A 30 0 SHEET 2 A 7 GLU A 37 LEU A 42 -1 O ARG A 38 N GLY A 29 SHEET 3 A 7 LEU A 49 ASP A 53 -1 O ILE A 51 N GLY A 41 SHEET 4 A 7 THR A 2 GLY A 8 1 N THR A 2 O GLU A 50 SHEET 5 A 7 SER A 81 ASP A 87 1 O VAL A 85 N ILE A 7 SHEET 6 A 7 VAL A 108 ASN A 113 1 O THR A 109 N ASN A 84 SHEET 7 A 7 VAL A 138 ALA A 140 1 O VAL A 139 N ILE A 110 SITE 1 AC1 13 ASN A 11 SER A 12 GLY A 13 LYS A 14 SITE 2 AC1 13 THR A 15 SER A 16 ASN A 113 MET A 114 SITE 3 AC1 13 ASP A 116 VAL A 117 SER A 142 ALA A 143 SITE 4 AC1 13 LEU A 144 CRYST1 42.800 42.800 282.100 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023368 0.000000 0.000000 0.00000 SCALE2 0.000000 0.023368 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003545 0.00000