HEADER HYDROLASE 25-FEB-10 3LXJ TITLE CRYSTAL STRUCTURE OF THE BROMODOMAIN OF HUMAN AAA DOMAIN CONTAINING 2B TITLE 2 (ATAD2B) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 2B; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: BROMODOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ATAD2B, KIAA1240; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-R3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 KEYWDS ATPASE FAMILY, AAA DOMAIN CONTAINING 2B, ATAD2B, BROMODOMAIN, KEYWDS 2 STRUCTURAL GENOMICS CONSORTIUM, SGC, ATP-BINDING, NUCLEOTIDE- KEYWDS 3 BINDING, PHOSPHOPROTEIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR P.FILIPPAKOPOULOS,T.KEATES,S.PICAUD,O.FEDOROV,T.KROJER,M.VOLLMAR, AUTHOR 2 J.MUNIZ,A.C.W.PIKE,F.VON DELFT,C.H.ARROWSMITH,A.EDWARDS,J.WEIGELT, AUTHOR 3 C.BOUNTRA,S.KNAPP,STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 4 06-SEP-23 3LXJ 1 REMARK SEQADV REVDAT 3 31-JAN-18 3LXJ 1 AUTHOR REVDAT 2 11-APR-12 3LXJ 1 JRNL VERSN REVDAT 1 09-MAR-10 3LXJ 0 JRNL AUTH P.FILIPPAKOPOULOS,S.PICAUD,M.MANGOS,T.KEATES,J.P.LAMBERT, JRNL AUTH 2 D.BARSYTE-LOVEJOY,I.FELLETAR,R.VOLKMER,S.MULLER,T.PAWSON, JRNL AUTH 3 A.C.GINGRAS,C.H.ARROWSMITH,S.KNAPP JRNL TITL HISTONE RECOGNITION AND LARGE-SCALE STRUCTURAL ANALYSIS OF JRNL TITL 2 THE HUMAN BROMODOMAIN FAMILY. JRNL REF CELL(CAMBRIDGE,MASS.) V. 149 214 2012 JRNL REFN ISSN 0092-8674 JRNL PMID 22464331 JRNL DOI 10.1016/J.CELL.2012.02.013 REMARK 2 REMARK 2 RESOLUTION. 2.33 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.33 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.81 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 29113 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1586 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.33 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.40 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2085 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.39 REMARK 3 BIN R VALUE (WORKING SET) : 0.3410 REMARK 3 BIN FREE R VALUE SET COUNT : 116 REMARK 3 BIN FREE R VALUE : 0.3760 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4268 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 136 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 6.62000 REMARK 3 B22 (A**2) : 6.62000 REMARK 3 B33 (A**2) : -13.25000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.067 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.050 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.107 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.482 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.937 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4343 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2978 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5863 ; 1.307 ; 1.985 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7282 ; 0.865 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 535 ; 5.799 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 207 ;39.432 ;24.493 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 805 ;15.461 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 35 ;15.132 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 686 ; 0.069 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4760 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 827 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2707 ; 2.856 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1058 ; 1.210 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4374 ; 3.906 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1636 ; 6.334 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1489 ; 6.558 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 3 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 3 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 984 A 984 5 REMARK 3 1 B 984 B 984 5 REMARK 3 1 C 984 C 984 5 REMARK 3 1 D 984 D 984 5 REMARK 3 2 A 1004 A 1038 5 REMARK 3 2 B 1004 B 1038 5 REMARK 3 2 C 1004 C 1038 5 REMARK 3 2 D 1004 D 1038 5 REMARK 3 3 A 1051 A 1085 4 REMARK 3 3 B 1051 B 1085 4 REMARK 3 3 C 1051 C 1085 4 REMARK 3 3 D 1051 D 1085 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 650 ; 0.25 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 B (A): 650 ; 0.32 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 C (A): 650 ; 0.25 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 D (A): 650 ; 0.29 ; 0.50 REMARK 3 LOOSE POSITIONAL 1 A (A): 252 ; 0.34 ; 5.00 REMARK 3 LOOSE POSITIONAL 1 B (A): 252 ; 0.32 ; 5.00 REMARK 3 LOOSE POSITIONAL 1 C (A): 252 ; 0.33 ; 5.00 REMARK 3 LOOSE POSITIONAL 1 D (A): 252 ; 0.31 ; 5.00 REMARK 3 MEDIUM THERMAL 1 A (A**2): 650 ; 0.86 ; 2.00 REMARK 3 MEDIUM THERMAL 1 B (A**2): 650 ; 0.85 ; 2.00 REMARK 3 MEDIUM THERMAL 1 C (A**2): 650 ; 0.90 ; 2.00 REMARK 3 MEDIUM THERMAL 1 D (A**2): 650 ; 0.87 ; 2.00 REMARK 3 LOOSE THERMAL 1 A (A**2): 252 ; 1.06 ; 10.00 REMARK 3 LOOSE THERMAL 1 B (A**2): 252 ; 0.91 ; 10.00 REMARK 3 LOOSE THERMAL 1 C (A**2): 252 ; 1.07 ; 10.00 REMARK 3 LOOSE THERMAL 1 D (A**2): 252 ; 0.94 ; 10.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 986 A 1002 5 REMARK 3 1 B 986 B 1002 5 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 2 A (A): 100 ; 0.18 ; 0.50 REMARK 3 LOOSE POSITIONAL 2 A (A): 69 ; 0.25 ; 5.00 REMARK 3 MEDIUM THERMAL 2 A (A**2): 100 ; 0.42 ; 2.00 REMARK 3 LOOSE THERMAL 2 A (A**2): 69 ; 0.49 ; 10.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 3 REMARK 3 CHAIN NAMES : C D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 C 986 C 1002 5 REMARK 3 1 D 986 D 1002 5 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 3 A (A): 100 ; 0.18 ; 0.50 REMARK 3 LOOSE POSITIONAL 3 A (A): 97 ; 0.32 ; 5.00 REMARK 3 MEDIUM THERMAL 3 A (A**2): 100 ; 0.68 ; 2.00 REMARK 3 LOOSE THERMAL 3 A (A**2): 97 ; 0.89 ; 10.00 REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 2 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.512 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : -H-K, K, -L REMARK 3 TWIN FRACTION : 0.488 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 951 A 987 REMARK 3 ORIGIN FOR THE GROUP (A): 58.4204 33.3108 27.7725 REMARK 3 T TENSOR REMARK 3 T11: 0.1709 T22: 0.2832 REMARK 3 T33: 0.1244 T12: -0.0606 REMARK 3 T13: -0.0297 T23: 0.0011 REMARK 3 L TENSOR REMARK 3 L11: 11.0146 L22: 2.8198 REMARK 3 L33: 1.9754 L12: -3.7229 REMARK 3 L13: 0.8665 L23: -0.8103 REMARK 3 S TENSOR REMARK 3 S11: 0.0450 S12: 0.1444 S13: 0.1654 REMARK 3 S21: -0.0319 S22: -0.0085 S23: -0.1735 REMARK 3 S31: 0.0113 S32: -0.0161 S33: -0.0365 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 988 A 995 REMARK 3 ORIGIN FOR THE GROUP (A): 72.5006 11.0551 30.2142 REMARK 3 T TENSOR REMARK 3 T11: 0.6238 T22: 0.5329 REMARK 3 T33: 0.5792 T12: 0.0326 REMARK 3 T13: 0.0132 T23: 0.0118 REMARK 3 L TENSOR REMARK 3 L11: 5.8671 L22: 2.4669 REMARK 3 L33: 16.4929 L12: 1.0994 REMARK 3 L13: -4.3035 L23: -6.2952 REMARK 3 S TENSOR REMARK 3 S11: -0.2819 S12: -0.0431 S13: -0.7969 REMARK 3 S21: -0.6528 S22: -0.2939 S23: -0.1290 REMARK 3 S31: 1.6280 S32: 0.8399 S33: 0.5757 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 996 A 1048 REMARK 3 ORIGIN FOR THE GROUP (A): 64.6334 22.8589 35.3860 REMARK 3 T TENSOR REMARK 3 T11: 0.1265 T22: 0.2089 REMARK 3 T33: 0.2582 T12: -0.0032 REMARK 3 T13: -0.0362 T23: 0.0545 REMARK 3 L TENSOR REMARK 3 L11: 1.7612 L22: 1.6485 REMARK 3 L33: 1.9655 L12: 0.4716 REMARK 3 L13: -0.4160 L23: -0.1503 REMARK 3 S TENSOR REMARK 3 S11: 0.0101 S12: -0.3979 S13: -0.5419 REMARK 3 S21: 0.2093 S22: 0.1328 S23: -0.1940 REMARK 3 S31: 0.2964 S32: 0.0660 S33: -0.1428 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1049 A 1085 REMARK 3 ORIGIN FOR THE GROUP (A): 56.0946 35.1603 37.6655 REMARK 3 T TENSOR REMARK 3 T11: 0.2465 T22: 0.3780 REMARK 3 T33: 0.0924 T12: -0.0077 REMARK 3 T13: -0.0120 T23: -0.0043 REMARK 3 L TENSOR REMARK 3 L11: 10.9988 L22: 2.6805 REMARK 3 L33: 1.9741 L12: -1.4387 REMARK 3 L13: 2.1349 L23: -0.8369 REMARK 3 S TENSOR REMARK 3 S11: -0.0706 S12: -0.3830 S13: -0.1409 REMARK 3 S21: 0.3492 S22: 0.0632 S23: 0.0832 REMARK 3 S31: -0.0902 S32: -0.3125 S33: 0.0074 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 951 B 980 REMARK 3 ORIGIN FOR THE GROUP (A): 58.7255 30.6798 68.1084 REMARK 3 T TENSOR REMARK 3 T11: 0.2007 T22: 0.2603 REMARK 3 T33: 0.0767 T12: -0.0442 REMARK 3 T13: -0.0113 T23: 0.0053 REMARK 3 L TENSOR REMARK 3 L11: 5.0873 L22: 16.3318 REMARK 3 L33: 3.2497 L12: 5.0513 REMARK 3 L13: -1.1859 L23: -2.9903 REMARK 3 S TENSOR REMARK 3 S11: 0.0908 S12: -0.1177 S13: 0.0458 REMARK 3 S21: 0.3231 S22: -0.0227 S23: -0.0716 REMARK 3 S31: 0.1652 S32: 0.0279 S33: -0.0681 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 981 B 1003 REMARK 3 ORIGIN FOR THE GROUP (A): 48.6373 52.1587 63.5513 REMARK 3 T TENSOR REMARK 3 T11: 0.5710 T22: 0.4243 REMARK 3 T33: 0.7824 T12: -0.0209 REMARK 3 T13: 0.0068 T23: 0.0934 REMARK 3 L TENSOR REMARK 3 L11: 11.0626 L22: 1.5231 REMARK 3 L33: 8.0010 L12: -2.2239 REMARK 3 L13: 1.5801 L23: -0.0287 REMARK 3 S TENSOR REMARK 3 S11: -0.0343 S12: -0.0134 S13: 0.7051 REMARK 3 S21: 0.0539 S22: 0.0412 S23: 0.7307 REMARK 3 S31: -1.0712 S32: -1.0121 S33: -0.0069 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1004 B 1080 REMARK 3 ORIGIN FOR THE GROUP (A): 56.5499 39.3790 59.1836 REMARK 3 T TENSOR REMARK 3 T11: 0.2278 T22: 0.2400 REMARK 3 T33: 0.2319 T12: -0.0773 REMARK 3 T13: -0.0342 T23: 0.0555 REMARK 3 L TENSOR REMARK 3 L11: 1.8501 L22: 4.2199 REMARK 3 L33: 2.3031 L12: 0.4010 REMARK 3 L13: -0.3733 L23: -0.7391 REMARK 3 S TENSOR REMARK 3 S11: -0.0031 S12: 0.1622 S13: 0.2966 REMARK 3 S21: -0.4135 S22: 0.1443 S23: 0.2264 REMARK 3 S31: 0.0231 S32: -0.0138 S33: -0.1412 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1081 B 1085 REMARK 3 ORIGIN FOR THE GROUP (A): 44.2333 18.5515 59.9076 REMARK 3 T TENSOR REMARK 3 T11: 0.7122 T22: 0.8668 REMARK 3 T33: 0.5877 T12: -0.0840 REMARK 3 T13: -0.1978 T23: 0.0697 REMARK 3 L TENSOR REMARK 3 L11: 4.2608 L22: 0.3652 REMARK 3 L33: 68.0010 L12: -0.1625 REMARK 3 L13: -15.3448 L23: -1.5530 REMARK 3 S TENSOR REMARK 3 S11: -0.5990 S12: 0.1939 S13: 0.4279 REMARK 3 S21: 0.1892 S22: 0.2770 S23: -0.3391 REMARK 3 S31: 0.9633 S32: -2.6590 S33: 0.3221 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 951 C 984 REMARK 3 ORIGIN FOR THE GROUP (A): 17.7569 34.8270 47.7402 REMARK 3 T TENSOR REMARK 3 T11: 0.1302 T22: 0.1008 REMARK 3 T33: 0.0819 T12: 0.0612 REMARK 3 T13: -0.0105 T23: 0.0113 REMARK 3 L TENSOR REMARK 3 L11: 4.0418 L22: 3.0665 REMARK 3 L33: 3.8593 L12: 2.0585 REMARK 3 L13: -0.5870 L23: -1.0682 REMARK 3 S TENSOR REMARK 3 S11: 0.1475 S12: -0.3860 S13: -0.1177 REMARK 3 S21: 0.0660 S22: -0.0430 S23: 0.1744 REMARK 3 S31: 0.0304 S32: -0.0455 S33: -0.1046 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 985 C 991 REMARK 3 ORIGIN FOR THE GROUP (A): 31.0690 54.5305 49.7166 REMARK 3 T TENSOR REMARK 3 T11: 0.5349 T22: 0.5136 REMARK 3 T33: 0.6132 T12: 0.0124 REMARK 3 T13: -0.1459 T23: -0.0116 REMARK 3 L TENSOR REMARK 3 L11: 0.1994 L22: 32.3638 REMARK 3 L33: 6.1162 L12: 1.3950 REMARK 3 L13: 1.0967 L23: 6.5791 REMARK 3 S TENSOR REMARK 3 S11: -0.0370 S12: 0.0191 S13: -0.1898 REMARK 3 S21: -0.7619 S22: 1.0557 S23: -1.9729 REMARK 3 S31: -0.4292 S32: 0.1155 S33: -1.0188 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 992 C 1080 REMARK 3 ORIGIN FOR THE GROUP (A): 23.0131 42.1900 39.3218 REMARK 3 T TENSOR REMARK 3 T11: 0.1871 T22: 0.2092 REMARK 3 T33: 0.1094 T12: 0.0877 REMARK 3 T13: -0.0361 T23: -0.0211 REMARK 3 L TENSOR REMARK 3 L11: 2.6845 L22: 1.5899 REMARK 3 L33: 2.1978 L12: 0.3349 REMARK 3 L13: -0.9930 L23: -0.9642 REMARK 3 S TENSOR REMARK 3 S11: -0.0012 S12: 0.2155 S13: -0.0049 REMARK 3 S21: -0.0810 S22: 0.0561 S23: 0.1006 REMARK 3 S31: -0.0822 S32: 0.1108 S33: -0.0549 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1081 C 1085 REMARK 3 ORIGIN FOR THE GROUP (A): -1.6245 40.4120 39.7940 REMARK 3 T TENSOR REMARK 3 T11: 0.6183 T22: 0.9519 REMARK 3 T33: 0.8215 T12: 0.1521 REMARK 3 T13: -0.0276 T23: 0.0084 REMARK 3 L TENSOR REMARK 3 L11: 18.1643 L22: 13.2614 REMARK 3 L33: 24.5971 L12: -4.6919 REMARK 3 L13: -1.4118 L23: -16.8113 REMARK 3 S TENSOR REMARK 3 S11: 0.6506 S12: -0.8665 S13: 3.1369 REMARK 3 S21: -0.5568 S22: 0.7306 S23: 0.0333 REMARK 3 S31: 0.5445 S32: -0.5222 S33: -1.3811 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 951 D 957 REMARK 3 ORIGIN FOR THE GROUP (A): 29.1311 15.5409 12.4339 REMARK 3 T TENSOR REMARK 3 T11: 0.6449 T22: 0.6310 REMARK 3 T33: 0.6329 T12: -0.0074 REMARK 3 T13: 0.1017 T23: -0.0303 REMARK 3 L TENSOR REMARK 3 L11: 11.8984 L22: 12.6616 REMARK 3 L33: 12.1668 L12: -6.5039 REMARK 3 L13: -2.5056 L23: 11.6578 REMARK 3 S TENSOR REMARK 3 S11: 0.0578 S12: 0.0656 S13: -0.2596 REMARK 3 S21: 0.1705 S22: 0.4703 S23: -0.4513 REMARK 3 S31: 0.2843 S32: 0.4660 S33: -0.5281 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 958 D 984 REMARK 3 ORIGIN FOR THE GROUP (A): 19.1838 37.1003 14.0515 REMARK 3 T TENSOR REMARK 3 T11: 0.2714 T22: 0.3456 REMARK 3 T33: 0.2702 T12: 0.0751 REMARK 3 T13: -0.0036 T23: -0.0097 REMARK 3 L TENSOR REMARK 3 L11: 0.9068 L22: 3.1803 REMARK 3 L33: 2.2946 L12: -0.3467 REMARK 3 L13: 1.0969 L23: 0.7341 REMARK 3 S TENSOR REMARK 3 S11: 0.1044 S12: 0.0614 S13: -0.1594 REMARK 3 S21: -0.3859 S22: -0.1515 S23: 0.5094 REMARK 3 S31: -0.2364 S32: -0.2789 S33: 0.0471 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 985 D 992 REMARK 3 ORIGIN FOR THE GROUP (A): 31.5672 54.3342 12.3246 REMARK 3 T TENSOR REMARK 3 T11: 0.5076 T22: 0.6941 REMARK 3 T33: 0.5664 T12: -0.0341 REMARK 3 T13: 0.0406 T23: -0.0401 REMARK 3 L TENSOR REMARK 3 L11: 10.2123 L22: 12.8888 REMARK 3 L33: 12.1809 L12: 11.3043 REMARK 3 L13: -10.4132 L23: -12.2916 REMARK 3 S TENSOR REMARK 3 S11: -0.3730 S12: 0.0001 S13: 0.1629 REMARK 3 S21: -0.2336 S22: -0.0681 S23: -0.1236 REMARK 3 S31: -0.0450 S32: 0.1512 S33: 0.4411 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 993 D 1084 REMARK 3 ORIGIN FOR THE GROUP (A): 25.4907 40.0030 22.3064 REMARK 3 T TENSOR REMARK 3 T11: 0.1373 T22: 0.2869 REMARK 3 T33: 0.1017 T12: 0.0285 REMARK 3 T13: -0.0049 T23: 0.0439 REMARK 3 L TENSOR REMARK 3 L11: 1.7929 L22: 3.1666 REMARK 3 L33: 2.3802 L12: -0.1918 REMARK 3 L13: 0.2759 L23: 0.9724 REMARK 3 S TENSOR REMARK 3 S11: -0.0167 S12: -0.1464 S13: -0.1309 REMARK 3 S21: 0.1813 S22: 0.0736 S23: -0.0795 REMARK 3 S31: -0.0776 S32: 0.0484 S33: -0.0569 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3LXJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-FEB-10. REMARK 100 THE DEPOSITION ID IS D_1000057854. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-DEC-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9204 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.9 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31006 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.327 REMARK 200 RESOLUTION RANGE LOW (A) : 40.810 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : 0.08000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.34 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.46 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.65300 REMARK 200 R SYM FOR SHELL (I) : 0.65300 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.1.4 REMARK 200 STARTING MODEL: ENSEMBLE OF 3DAI, 2NXB, 2OO1, 2OSS, 2OUO, 2RFJ, REMARK 200 3HMH, 3D7C, 3DWY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% ISOPROPANOL 0.1M TRIS PH 8.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 136.03400 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 68.01700 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 102.02550 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 34.00850 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 170.04250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1086 REMARK 465 GLY B 1086 REMARK 465 GLY C 1086 REMARK 465 ARG D 1085 REMARK 465 GLY D 1086 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 951 OG REMARK 470 LYS A 972 CE NZ REMARK 470 LYS A 978 CD CE NZ REMARK 470 LYS A 985 CD CE NZ REMARK 470 GLU A 990 CG CD OE1 OE2 REMARK 470 GLU A 991 CG CD OE1 OE2 REMARK 470 SER A 993 OG REMARK 470 ASP A 994 CG OD1 OD2 REMARK 470 LEU A 996 CG CD1 CD2 REMARK 470 LYS A1025 CE NZ REMARK 470 ASP A1040 CG OD1 OD2 REMARK 470 LYS A1041 CG CD CE NZ REMARK 470 ASP A1042 CG OD1 OD2 REMARK 470 ILE A1083 CG1 CG2 CD1 REMARK 470 LYS A1084 CE NZ REMARK 470 SER B 951 OG REMARK 470 LYS B 978 NZ REMARK 470 LYS B 985 CE NZ REMARK 470 ASP B 988 CG OD1 OD2 REMARK 470 ILE B 989 CG1 CG2 CD1 REMARK 470 GLU B 990 CG CD OE1 OE2 REMARK 470 GLU B 991 CG CD OE1 OE2 REMARK 470 VAL B 992 CG1 CG2 REMARK 470 SER B 993 OG REMARK 470 ASP B 994 CG OD1 OD2 REMARK 470 LEU B 996 CG CD1 CD2 REMARK 470 GLU B 997 CD OE1 OE2 REMARK 470 LYS B1000 CG CD CE NZ REMARK 470 LYS B1025 CE NZ REMARK 470 ASP B1040 CG OD1 OD2 REMARK 470 LYS B1041 CG CD CE NZ REMARK 470 LYS B1073 CG CD CE NZ REMARK 470 ILE B1083 CG1 CG2 CD1 REMARK 470 SER C 951 OG REMARK 470 GLN C 955 CD OE1 NE2 REMARK 470 LYS C 972 CD CE NZ REMARK 470 LYS C 978 CG CD CE NZ REMARK 470 LYS C 985 CD CE NZ REMARK 470 GLU C 990 CG CD OE1 OE2 REMARK 470 GLU C 991 CD OE1 OE2 REMARK 470 VAL C 992 CG1 CG2 REMARK 470 SER C 993 OG REMARK 470 GLU C 997 CG CD OE1 OE2 REMARK 470 LYS C1073 CD CE NZ REMARK 470 SER D 951 OG REMARK 470 LYS D 972 CD CE NZ REMARK 470 ILE D 989 CG1 CG2 CD1 REMARK 470 GLU D 990 CG CD OE1 OE2 REMARK 470 VAL D 992 CG1 CG2 REMARK 470 SER D 993 OG REMARK 470 LYS D1073 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 988 99.95 -69.81 REMARK 500 VAL B 992 78.52 -106.00 REMARK 500 MET B1003 144.33 -172.80 REMARK 500 ASP B1040 179.28 -54.85 REMARK 500 ASN C1038 74.38 -117.39 REMARK 500 LYS C1041 -39.82 -132.63 REMARK 500 VAL D 992 -70.09 -64.94 REMARK 500 SER D 993 -37.67 -29.96 REMARK 500 ASN D1038 63.32 -115.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER D 951 MET D 952 142.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPA B 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPA D 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPA D 5 DBREF 3LXJ A 952 1086 UNP Q9ULI0 ATD2B_HUMAN 952 1086 DBREF 3LXJ B 952 1086 UNP Q9ULI0 ATD2B_HUMAN 952 1086 DBREF 3LXJ C 952 1086 UNP Q9ULI0 ATD2B_HUMAN 952 1086 DBREF 3LXJ D 952 1086 UNP Q9ULI0 ATD2B_HUMAN 952 1086 SEQADV 3LXJ SER A 951 UNP Q9ULI0 EXPRESSION TAG SEQADV 3LXJ SER B 951 UNP Q9ULI0 EXPRESSION TAG SEQADV 3LXJ SER C 951 UNP Q9ULI0 EXPRESSION TAG SEQADV 3LXJ SER D 951 UNP Q9ULI0 EXPRESSION TAG SEQRES 1 A 136 SER MET GLU ASP GLN GLU GLU ASN THR LEU ARG GLU LEU SEQRES 2 A 136 ARG LEU PHE LEU ARG ASP VAL THR LYS ARG LEU ALA THR SEQRES 3 A 136 ASP LYS ARG PHE ASN ILE PHE SER LYS PRO VAL ASP ILE SEQRES 4 A 136 GLU GLU VAL SER ASP TYR LEU GLU VAL ILE LYS GLU PRO SEQRES 5 A 136 MET ASP LEU SER THR VAL ILE THR LYS ILE ASP LYS HIS SEQRES 6 A 136 ASN TYR LEU THR ALA LYS ASP PHE LEU LYS ASP ILE ASP SEQRES 7 A 136 LEU ILE CYS SER ASN ALA LEU GLU TYR ASN PRO ASP LYS SEQRES 8 A 136 ASP PRO GLY ASP LYS ILE ILE ARG HIS ARG ALA CYS THR SEQRES 9 A 136 LEU LYS ASP THR ALA HIS ALA ILE ILE ALA ALA GLU LEU SEQRES 10 A 136 ASP PRO GLU PHE ASN LYS LEU CYS GLU GLU ILE LYS GLU SEQRES 11 A 136 ALA ARG ILE LYS ARG GLY SEQRES 1 B 136 SER MET GLU ASP GLN GLU GLU ASN THR LEU ARG GLU LEU SEQRES 2 B 136 ARG LEU PHE LEU ARG ASP VAL THR LYS ARG LEU ALA THR SEQRES 3 B 136 ASP LYS ARG PHE ASN ILE PHE SER LYS PRO VAL ASP ILE SEQRES 4 B 136 GLU GLU VAL SER ASP TYR LEU GLU VAL ILE LYS GLU PRO SEQRES 5 B 136 MET ASP LEU SER THR VAL ILE THR LYS ILE ASP LYS HIS SEQRES 6 B 136 ASN TYR LEU THR ALA LYS ASP PHE LEU LYS ASP ILE ASP SEQRES 7 B 136 LEU ILE CYS SER ASN ALA LEU GLU TYR ASN PRO ASP LYS SEQRES 8 B 136 ASP PRO GLY ASP LYS ILE ILE ARG HIS ARG ALA CYS THR SEQRES 9 B 136 LEU LYS ASP THR ALA HIS ALA ILE ILE ALA ALA GLU LEU SEQRES 10 B 136 ASP PRO GLU PHE ASN LYS LEU CYS GLU GLU ILE LYS GLU SEQRES 11 B 136 ALA ARG ILE LYS ARG GLY SEQRES 1 C 136 SER MET GLU ASP GLN GLU GLU ASN THR LEU ARG GLU LEU SEQRES 2 C 136 ARG LEU PHE LEU ARG ASP VAL THR LYS ARG LEU ALA THR SEQRES 3 C 136 ASP LYS ARG PHE ASN ILE PHE SER LYS PRO VAL ASP ILE SEQRES 4 C 136 GLU GLU VAL SER ASP TYR LEU GLU VAL ILE LYS GLU PRO SEQRES 5 C 136 MET ASP LEU SER THR VAL ILE THR LYS ILE ASP LYS HIS SEQRES 6 C 136 ASN TYR LEU THR ALA LYS ASP PHE LEU LYS ASP ILE ASP SEQRES 7 C 136 LEU ILE CYS SER ASN ALA LEU GLU TYR ASN PRO ASP LYS SEQRES 8 C 136 ASP PRO GLY ASP LYS ILE ILE ARG HIS ARG ALA CYS THR SEQRES 9 C 136 LEU LYS ASP THR ALA HIS ALA ILE ILE ALA ALA GLU LEU SEQRES 10 C 136 ASP PRO GLU PHE ASN LYS LEU CYS GLU GLU ILE LYS GLU SEQRES 11 C 136 ALA ARG ILE LYS ARG GLY SEQRES 1 D 136 SER MET GLU ASP GLN GLU GLU ASN THR LEU ARG GLU LEU SEQRES 2 D 136 ARG LEU PHE LEU ARG ASP VAL THR LYS ARG LEU ALA THR SEQRES 3 D 136 ASP LYS ARG PHE ASN ILE PHE SER LYS PRO VAL ASP ILE SEQRES 4 D 136 GLU GLU VAL SER ASP TYR LEU GLU VAL ILE LYS GLU PRO SEQRES 5 D 136 MET ASP LEU SER THR VAL ILE THR LYS ILE ASP LYS HIS SEQRES 6 D 136 ASN TYR LEU THR ALA LYS ASP PHE LEU LYS ASP ILE ASP SEQRES 7 D 136 LEU ILE CYS SER ASN ALA LEU GLU TYR ASN PRO ASP LYS SEQRES 8 D 136 ASP PRO GLY ASP LYS ILE ILE ARG HIS ARG ALA CYS THR SEQRES 9 D 136 LEU LYS ASP THR ALA HIS ALA ILE ILE ALA ALA GLU LEU SEQRES 10 D 136 ASP PRO GLU PHE ASN LYS LEU CYS GLU GLU ILE LYS GLU SEQRES 11 D 136 ALA ARG ILE LYS ARG GLY HET IPA A 4 4 HET IPA B 3 4 HET IPA C 2 4 HET IPA D 1 4 HET IPA D 5 4 HETNAM IPA ISOPROPYL ALCOHOL HETSYN IPA 2-PROPANOL FORMUL 5 IPA 5(C3 H8 O) FORMUL 10 HOH *136(H2 O) HELIX 1 1 SER A 951 THR A 976 1 26 HELIX 2 2 ASP A 977 ASN A 981 5 5 HELIX 3 3 ASP A 994 ILE A 999 1 6 HELIX 4 4 ASP A 1004 LYS A 1014 1 11 HELIX 5 5 THR A 1019 ASN A 1038 1 20 HELIX 6 6 ASP A 1042 LEU A 1067 1 26 HELIX 7 7 ASP A 1068 LYS A 1084 1 17 HELIX 8 8 SER B 951 THR B 976 1 26 HELIX 9 9 ASP B 977 SER B 984 5 8 HELIX 10 10 ASP B 994 ILE B 999 1 6 HELIX 11 11 ASP B 1004 LYS B 1014 1 11 HELIX 12 12 THR B 1019 ASN B 1038 1 20 HELIX 13 13 ASP B 1042 LEU B 1067 1 26 HELIX 14 14 ASP B 1068 ARG B 1085 1 18 HELIX 15 15 MET C 952 THR C 976 1 25 HELIX 16 16 ASP C 977 SER C 984 5 8 HELIX 17 17 ILE C 989 SER C 993 5 5 HELIX 18 18 ASP C 994 VAL C 998 5 5 HELIX 19 19 ASP C 1004 LYS C 1014 1 11 HELIX 20 20 THR C 1019 ASN C 1038 1 20 HELIX 21 21 ASP C 1042 LEU C 1067 1 26 HELIX 22 22 ASP C 1068 LYS C 1084 1 17 HELIX 23 23 ASP D 954 THR D 976 1 23 HELIX 24 24 ASP D 977 SER D 984 5 8 HELIX 25 25 GLU D 991 ILE D 999 1 9 HELIX 26 26 ASP D 1004 LYS D 1014 1 11 HELIX 27 27 THR D 1019 ASN D 1038 1 20 HELIX 28 28 ASP D 1042 LEU D 1067 1 26 HELIX 29 29 ASP D 1068 LYS D 1084 1 17 SITE 1 AC1 2 GLU B1066 ASP B1068 SITE 1 AC2 2 GLU D1066 ASP D1068 SITE 1 AC3 1 ARG D1049 CRYST1 79.640 79.640 204.051 90.00 90.00 120.00 P 65 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012557 0.007250 0.000000 0.00000 SCALE2 0.000000 0.014499 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004901 0.00000