HEADER RECOMBINATION 28-FEB-10 3LYS TITLE CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF THE PROPHAGE PI2 PROTEIN TITLE 2 01 (INTEGRASE) FROM LACTOCOCCUS LACTIS, NORTHEAST STRUCTURAL GENOMICS TITLE 3 CONSORTIUM TARGET KR124F COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROPHAGE PI2 PROTEIN 01, INTEGRASE; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 FRAGMENT: SEQUENCE DATABASE RESIDUES 54-156; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACTOCOCCUS LACTIS; SOURCE 3 ORGANISM_TAXID: 1360; SOURCE 4 STRAIN: IL1403; SOURCE 5 GENE: INT, L364, L36404, LL1008, PI201; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)+ MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET 21-23C KEYWDS HELICAL N-TERMINAL DOMAIN, STRUCTURAL GENOMICS, PSI-2, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, KEYWDS 3 NESG, RECOMBINATION EXPDTA X-RAY DIFFRACTION AUTHOR F.FOROUHAR,M.ABASHIDZE,J.SEETHARAMAN,S.SAHDEV,R.XIAO,C.CICCOSANTI, AUTHOR 2 R.L.BELOTE,J.K.EVERETT,R.NAIR,T.B.ACTON,B.ROST,G.T.MONTELIONE, AUTHOR 3 L.TONG,J.F.HUNT,NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 4 13-OCT-21 3LYS 1 SEQADV REVDAT 3 17-JUL-19 3LYS 1 REMARK LINK REVDAT 2 25-OCT-17 3LYS 1 REMARK REVDAT 1 16-MAR-10 3LYS 0 JRNL AUTH F.FOROUHAR,M.ABASHIDZE,J.SEETHARAMAN,S.SAHDEV,R.XIAO, JRNL AUTH 2 C.CICCOSANTI,R.L.BELOTE,J.K.EVERETT,R.NAIR,T.B.ACTON,B.ROST, JRNL AUTH 3 G.T.MONTELIONE,L.TONG,J.F.HUNT JRNL TITL NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET KR124F JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.2 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 220812.260 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 73.2 REMARK 3 NUMBER OF REFLECTIONS : 32489 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.260 REMARK 3 FREE R VALUE : 0.290 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1589 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.007 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.90 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 37.60 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1621 REMARK 3 BIN R VALUE (WORKING SET) : 0.3480 REMARK 3 BIN FREE R VALUE : 0.3370 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 71 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.040 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5188 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 51 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 35.22000 REMARK 3 B22 (A**2) : -13.30000 REMARK 3 B33 (A**2) : -21.92000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.47 REMARK 3 ESD FROM SIGMAA (A) : 0.83 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.53 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.77 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.100 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 19.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.680 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.25 REMARK 3 BSOL : -2.18 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED REMARK 4 REMARK 4 3LYS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-MAR-10. REMARK 100 THE DEPOSITION ID IS D_1000057896. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-FEB-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X6A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34171 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.300 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 77.4 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : 0.05900 REMARK 200 FOR THE DATA SET : 16.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 56.6 REMARK 200 DATA REDUNDANCY IN SHELL : 2.20 REMARK 200 R MERGE FOR SHELL (I) : 0.13500 REMARK 200 R SYM FOR SHELL (I) : 0.13800 REMARK 200 FOR SHELL : 3.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX FOLLOWED BY SOLVE/RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN SOLUTION: 100MM NACL, 5MM DTT, REMARK 280 0.02% NAN3, 10MM TRIS-HCL (PH 7.5), RESERVOIR SOLUTION: 0.1M REMARK 280 CACODYLATE ACID (PH 6.5) AND 20% PEG8K, MICROBATCH, UNDER OIL, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 33.35200 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 78.47400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.13600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 78.47400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.35200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 45.13600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: STATIC LIGHT SCATTERING SUGGESTS THAT THIS DOMAIN IS REMARK 300 MONOMER IN SOLUTION. WHEREAS IN THE CRYSTAL STRUCTURE IT FORMS A REMARK 300 HEXAMERIC RING. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 53 REMARK 465 ASP A 54 REMARK 465 HIS A 160 REMARK 465 HIS A 161 REMARK 465 HIS A 162 REMARK 465 HIS A 163 REMARK 465 HIS A 164 REMARK 465 MSE B 53 REMARK 465 ASP B 54 REMARK 465 PRO B 55 REMARK 465 ILE B 56 REMARK 465 HIS B 161 REMARK 465 HIS B 162 REMARK 465 HIS B 163 REMARK 465 HIS B 164 REMARK 465 MSE C 53 REMARK 465 ASP C 54 REMARK 465 HIS C 159 REMARK 465 HIS C 160 REMARK 465 HIS C 161 REMARK 465 HIS C 162 REMARK 465 HIS C 163 REMARK 465 HIS C 164 REMARK 465 MSE D 53 REMARK 465 ASP D 54 REMARK 465 PRO D 55 REMARK 465 HIS D 163 REMARK 465 HIS D 164 REMARK 465 MSE E 53 REMARK 465 ASP E 54 REMARK 465 HIS E 159 REMARK 465 HIS E 160 REMARK 465 HIS E 161 REMARK 465 HIS E 162 REMARK 465 HIS E 163 REMARK 465 HIS E 164 REMARK 465 MSE F 53 REMARK 465 ASP F 54 REMARK 465 HIS F 160 REMARK 465 HIS F 161 REMARK 465 HIS F 162 REMARK 465 HIS F 163 REMARK 465 HIS F 164 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU D 69 O HOH D 13 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG D 110 CD - NE - CZ ANGL. DEV. = 15.2 DEGREES REMARK 500 ARG D 110 NE - CZ - NH1 ANGL. DEV. = 10.4 DEGREES REMARK 500 ARG D 110 NE - CZ - NH2 ANGL. DEV. = -11.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 73 -100.57 -12.39 REMARK 500 THR A 93 -75.65 -77.13 REMARK 500 PRO A 96 -112.51 -59.28 REMARK 500 ASN A 97 27.76 -72.76 REMARK 500 THR A 118 9.67 -156.46 REMARK 500 ASP A 147 92.08 -67.67 REMARK 500 VAL A 153 -18.60 -42.59 REMARK 500 GLU A 158 117.14 -178.81 REMARK 500 GLN B 58 155.54 172.88 REMARK 500 LYS B 73 -101.55 -11.40 REMARK 500 THR B 93 -76.84 -74.77 REMARK 500 PRO B 96 -112.46 -59.34 REMARK 500 ASN B 97 27.92 -73.13 REMARK 500 THR B 118 10.54 -155.44 REMARK 500 THR B 149 6.86 -62.44 REMARK 500 THR B 150 -87.37 -67.12 REMARK 500 ALA B 152 9.70 -56.66 REMARK 500 VAL B 153 9.34 -57.73 REMARK 500 HIS B 159 37.24 88.99 REMARK 500 LYS C 73 -100.46 -13.01 REMARK 500 THR C 93 -78.30 -75.28 REMARK 500 PRO C 96 -111.83 -59.93 REMARK 500 ASN C 97 27.81 -73.25 REMARK 500 THR C 118 8.63 -153.81 REMARK 500 THR C 150 -96.98 -67.69 REMARK 500 ALA C 152 24.16 -66.32 REMARK 500 VAL C 153 3.56 -64.72 REMARK 500 LEU C 157 -158.17 -147.33 REMARK 500 GLN D 58 165.77 174.16 REMARK 500 LYS D 73 -100.71 -12.46 REMARK 500 THR D 93 -76.45 -75.43 REMARK 500 PRO D 96 -112.58 -60.45 REMARK 500 ASN D 97 28.63 -72.43 REMARK 500 THR D 118 11.60 -156.23 REMARK 500 THR D 150 -99.08 -57.79 REMARK 500 ALA D 152 16.33 -66.01 REMARK 500 VAL D 153 15.33 -54.69 REMARK 500 LEU D 157 -142.10 -128.67 REMARK 500 GLU D 158 -44.03 -165.00 REMARK 500 HIS D 160 87.27 -159.45 REMARK 500 HIS D 161 64.18 -175.63 REMARK 500 ILE E 56 105.77 179.30 REMARK 500 GLN E 58 137.18 -174.17 REMARK 500 LYS E 73 -100.57 -11.47 REMARK 500 THR E 93 -77.98 -75.71 REMARK 500 PRO E 96 -111.81 -60.80 REMARK 500 ASN E 97 28.26 -73.45 REMARK 500 THR E 118 9.55 -156.39 REMARK 500 GLN E 145 -72.97 -60.77 REMARK 500 ALA E 152 20.39 -65.77 REMARK 500 REMARK 500 THIS ENTRY HAS 59 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: KR124F RELATED DB: TARGETDB DBREF 3LYS A 54 156 UNP Q9CGT4 Q9CGT4_LACLA 54 156 DBREF 3LYS B 54 156 UNP Q9CGT4 Q9CGT4_LACLA 54 156 DBREF 3LYS C 54 156 UNP Q9CGT4 Q9CGT4_LACLA 54 156 DBREF 3LYS D 54 156 UNP Q9CGT4 Q9CGT4_LACLA 54 156 DBREF 3LYS E 54 156 UNP Q9CGT4 Q9CGT4_LACLA 54 156 DBREF 3LYS F 54 156 UNP Q9CGT4 Q9CGT4_LACLA 54 156 SEQADV 3LYS MSE A 53 UNP Q9CGT4 INITIATING METHIONINE SEQADV 3LYS CYS A 137 UNP Q9CGT4 PRO 137 ENGINEERED MUTATION SEQADV 3LYS LEU A 157 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS GLU A 158 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS A 159 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS A 160 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS A 161 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS A 162 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS A 163 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS A 164 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS MSE B 53 UNP Q9CGT4 INITIATING METHIONINE SEQADV 3LYS CYS B 137 UNP Q9CGT4 PRO 137 ENGINEERED MUTATION SEQADV 3LYS LEU B 157 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS GLU B 158 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS B 159 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS B 160 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS B 161 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS B 162 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS B 163 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS B 164 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS MSE C 53 UNP Q9CGT4 INITIATING METHIONINE SEQADV 3LYS CYS C 137 UNP Q9CGT4 PRO 137 ENGINEERED MUTATION SEQADV 3LYS LEU C 157 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS GLU C 158 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS C 159 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS C 160 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS C 161 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS C 162 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS C 163 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS C 164 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS MSE D 53 UNP Q9CGT4 INITIATING METHIONINE SEQADV 3LYS CYS D 137 UNP Q9CGT4 PRO 137 ENGINEERED MUTATION SEQADV 3LYS LEU D 157 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS GLU D 158 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS D 159 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS D 160 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS D 161 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS D 162 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS D 163 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS D 164 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS MSE E 53 UNP Q9CGT4 INITIATING METHIONINE SEQADV 3LYS CYS E 137 UNP Q9CGT4 PRO 137 ENGINEERED MUTATION SEQADV 3LYS LEU E 157 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS GLU E 158 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS E 159 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS E 160 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS E 161 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS E 162 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS E 163 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS E 164 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS MSE F 53 UNP Q9CGT4 INITIATING METHIONINE SEQADV 3LYS CYS F 137 UNP Q9CGT4 PRO 137 ENGINEERED MUTATION SEQADV 3LYS LEU F 157 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS GLU F 158 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS F 159 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS F 160 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS F 161 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS F 162 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS F 163 UNP Q9CGT4 EXPRESSION TAG SEQADV 3LYS HIS F 164 UNP Q9CGT4 EXPRESSION TAG SEQRES 1 A 112 MSE ASP PRO ILE LYS GLN GLU ILE SER GLU TYR PHE LYS SEQRES 2 A 112 ASP TRP MSE GLU LEU TYR LYS LYS ASN ALA ILE ASP GLU SEQRES 3 A 112 MSE THR TYR LYS GLY TYR GLU GLN THR LEU LYS TYR LEU SEQRES 4 A 112 LYS THR TYR MSE PRO ASN VAL LEU ILE SER GLU ILE THR SEQRES 5 A 112 ALA SER SER TYR GLN ARG ALA LEU ASN LYS PHE ALA GLU SEQRES 6 A 112 THR HIS ALA LYS ALA SER THR LYS GLY PHE HIS THR ARG SEQRES 7 A 112 VAL ARG ALA SER ILE GLN CYS LEU ILE GLU GLU GLY ARG SEQRES 8 A 112 LEU GLN LYS ASP PHE THR THR ARG ALA VAL VAL LYS GLY SEQRES 9 A 112 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 112 MSE ASP PRO ILE LYS GLN GLU ILE SER GLU TYR PHE LYS SEQRES 2 B 112 ASP TRP MSE GLU LEU TYR LYS LYS ASN ALA ILE ASP GLU SEQRES 3 B 112 MSE THR TYR LYS GLY TYR GLU GLN THR LEU LYS TYR LEU SEQRES 4 B 112 LYS THR TYR MSE PRO ASN VAL LEU ILE SER GLU ILE THR SEQRES 5 B 112 ALA SER SER TYR GLN ARG ALA LEU ASN LYS PHE ALA GLU SEQRES 6 B 112 THR HIS ALA LYS ALA SER THR LYS GLY PHE HIS THR ARG SEQRES 7 B 112 VAL ARG ALA SER ILE GLN CYS LEU ILE GLU GLU GLY ARG SEQRES 8 B 112 LEU GLN LYS ASP PHE THR THR ARG ALA VAL VAL LYS GLY SEQRES 9 B 112 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 C 112 MSE ASP PRO ILE LYS GLN GLU ILE SER GLU TYR PHE LYS SEQRES 2 C 112 ASP TRP MSE GLU LEU TYR LYS LYS ASN ALA ILE ASP GLU SEQRES 3 C 112 MSE THR TYR LYS GLY TYR GLU GLN THR LEU LYS TYR LEU SEQRES 4 C 112 LYS THR TYR MSE PRO ASN VAL LEU ILE SER GLU ILE THR SEQRES 5 C 112 ALA SER SER TYR GLN ARG ALA LEU ASN LYS PHE ALA GLU SEQRES 6 C 112 THR HIS ALA LYS ALA SER THR LYS GLY PHE HIS THR ARG SEQRES 7 C 112 VAL ARG ALA SER ILE GLN CYS LEU ILE GLU GLU GLY ARG SEQRES 8 C 112 LEU GLN LYS ASP PHE THR THR ARG ALA VAL VAL LYS GLY SEQRES 9 C 112 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 D 112 MSE ASP PRO ILE LYS GLN GLU ILE SER GLU TYR PHE LYS SEQRES 2 D 112 ASP TRP MSE GLU LEU TYR LYS LYS ASN ALA ILE ASP GLU SEQRES 3 D 112 MSE THR TYR LYS GLY TYR GLU GLN THR LEU LYS TYR LEU SEQRES 4 D 112 LYS THR TYR MSE PRO ASN VAL LEU ILE SER GLU ILE THR SEQRES 5 D 112 ALA SER SER TYR GLN ARG ALA LEU ASN LYS PHE ALA GLU SEQRES 6 D 112 THR HIS ALA LYS ALA SER THR LYS GLY PHE HIS THR ARG SEQRES 7 D 112 VAL ARG ALA SER ILE GLN CYS LEU ILE GLU GLU GLY ARG SEQRES 8 D 112 LEU GLN LYS ASP PHE THR THR ARG ALA VAL VAL LYS GLY SEQRES 9 D 112 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 E 112 MSE ASP PRO ILE LYS GLN GLU ILE SER GLU TYR PHE LYS SEQRES 2 E 112 ASP TRP MSE GLU LEU TYR LYS LYS ASN ALA ILE ASP GLU SEQRES 3 E 112 MSE THR TYR LYS GLY TYR GLU GLN THR LEU LYS TYR LEU SEQRES 4 E 112 LYS THR TYR MSE PRO ASN VAL LEU ILE SER GLU ILE THR SEQRES 5 E 112 ALA SER SER TYR GLN ARG ALA LEU ASN LYS PHE ALA GLU SEQRES 6 E 112 THR HIS ALA LYS ALA SER THR LYS GLY PHE HIS THR ARG SEQRES 7 E 112 VAL ARG ALA SER ILE GLN CYS LEU ILE GLU GLU GLY ARG SEQRES 8 E 112 LEU GLN LYS ASP PHE THR THR ARG ALA VAL VAL LYS GLY SEQRES 9 E 112 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 F 112 MSE ASP PRO ILE LYS GLN GLU ILE SER GLU TYR PHE LYS SEQRES 2 F 112 ASP TRP MSE GLU LEU TYR LYS LYS ASN ALA ILE ASP GLU SEQRES 3 F 112 MSE THR TYR LYS GLY TYR GLU GLN THR LEU LYS TYR LEU SEQRES 4 F 112 LYS THR TYR MSE PRO ASN VAL LEU ILE SER GLU ILE THR SEQRES 5 F 112 ALA SER SER TYR GLN ARG ALA LEU ASN LYS PHE ALA GLU SEQRES 6 F 112 THR HIS ALA LYS ALA SER THR LYS GLY PHE HIS THR ARG SEQRES 7 F 112 VAL ARG ALA SER ILE GLN CYS LEU ILE GLU GLU GLY ARG SEQRES 8 F 112 LEU GLN LYS ASP PHE THR THR ARG ALA VAL VAL LYS GLY SEQRES 9 F 112 LEU GLU HIS HIS HIS HIS HIS HIS MODRES 3LYS MSE A 68 MET SELENOMETHIONINE MODRES 3LYS MSE A 79 MET SELENOMETHIONINE MODRES 3LYS MSE A 95 MET SELENOMETHIONINE MODRES 3LYS MSE B 68 MET SELENOMETHIONINE MODRES 3LYS MSE B 79 MET SELENOMETHIONINE MODRES 3LYS MSE B 95 MET SELENOMETHIONINE MODRES 3LYS MSE C 68 MET SELENOMETHIONINE MODRES 3LYS MSE C 79 MET SELENOMETHIONINE MODRES 3LYS MSE C 95 MET SELENOMETHIONINE MODRES 3LYS MSE D 68 MET SELENOMETHIONINE MODRES 3LYS MSE D 79 MET SELENOMETHIONINE MODRES 3LYS MSE D 95 MET SELENOMETHIONINE MODRES 3LYS MSE E 68 MET SELENOMETHIONINE MODRES 3LYS MSE E 79 MET SELENOMETHIONINE MODRES 3LYS MSE E 95 MET SELENOMETHIONINE MODRES 3LYS MSE F 68 MET SELENOMETHIONINE MODRES 3LYS MSE F 79 MET SELENOMETHIONINE MODRES 3LYS MSE F 95 MET SELENOMETHIONINE HET MSE A 68 8 HET MSE A 79 8 HET MSE A 95 8 HET MSE B 68 8 HET MSE B 79 8 HET MSE B 95 8 HET MSE C 68 8 HET MSE C 79 8 HET MSE C 95 8 HET MSE D 68 8 HET MSE D 79 8 HET MSE D 95 8 HET MSE E 68 8 HET MSE E 79 8 HET MSE E 95 8 HET MSE F 68 8 HET MSE F 79 8 HET MSE F 95 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 18(C5 H11 N O2 SE) FORMUL 7 HOH *51(H2 O) HELIX 1 1 GLU A 59 LYS A 72 1 14 HELIX 2 2 ASP A 77 MSE A 95 1 19 HELIX 3 3 THR A 104 GLU A 117 1 14 HELIX 4 4 ALA A 120 GLU A 141 1 22 HELIX 5 5 GLU B 59 LYS B 72 1 14 HELIX 6 6 ASP B 77 MSE B 95 1 19 HELIX 7 7 THR B 104 GLU B 117 1 14 HELIX 8 8 ALA B 120 GLU B 141 1 22 HELIX 9 9 GLU C 59 LYS C 72 1 14 HELIX 10 10 ASP C 77 MSE C 95 1 19 HELIX 11 11 THR C 104 GLU C 117 1 14 HELIX 12 12 ALA C 120 GLU C 141 1 22 HELIX 13 13 GLU D 59 LYS D 72 1 14 HELIX 14 14 ASP D 77 MSE D 95 1 19 HELIX 15 15 THR D 104 GLU D 117 1 14 HELIX 16 16 ALA D 120 GLU D 141 1 22 HELIX 17 17 GLU E 59 LYS E 72 1 14 HELIX 18 18 ASP E 77 MSE E 95 1 19 HELIX 19 19 THR E 104 GLU E 117 1 14 HELIX 20 20 ALA E 120 GLU E 141 1 22 HELIX 21 21 GLU F 59 LYS F 72 1 14 HELIX 22 22 ASP F 77 MSE F 95 1 19 HELIX 23 23 THR F 104 GLU F 117 1 14 HELIX 24 24 ALA F 120 GLU F 141 1 22 LINK C TRP A 67 N MSE A 68 1555 1555 1.33 LINK C MSE A 68 N GLU A 69 1555 1555 1.33 LINK C GLU A 78 N MSE A 79 1555 1555 1.33 LINK C MSE A 79 N THR A 80 1555 1555 1.33 LINK C TYR A 94 N MSE A 95 1555 1555 1.32 LINK C MSE A 95 N PRO A 96 1555 1555 1.33 LINK C TRP B 67 N MSE B 68 1555 1555 1.33 LINK C MSE B 68 N GLU B 69 1555 1555 1.33 LINK C GLU B 78 N MSE B 79 1555 1555 1.33 LINK C MSE B 79 N THR B 80 1555 1555 1.33 LINK C TYR B 94 N MSE B 95 1555 1555 1.32 LINK C MSE B 95 N PRO B 96 1555 1555 1.34 LINK C TRP C 67 N MSE C 68 1555 1555 1.33 LINK C MSE C 68 N GLU C 69 1555 1555 1.33 LINK C GLU C 78 N MSE C 79 1555 1555 1.33 LINK C MSE C 79 N THR C 80 1555 1555 1.33 LINK C TYR C 94 N MSE C 95 1555 1555 1.33 LINK C MSE C 95 N PRO C 96 1555 1555 1.34 LINK C TRP D 67 N MSE D 68 1555 1555 1.33 LINK C MSE D 68 N GLU D 69 1555 1555 1.32 LINK C GLU D 78 N MSE D 79 1555 1555 1.33 LINK C MSE D 79 N THR D 80 1555 1555 1.33 LINK C TYR D 94 N MSE D 95 1555 1555 1.32 LINK C MSE D 95 N PRO D 96 1555 1555 1.33 LINK C TRP E 67 N MSE E 68 1555 1555 1.33 LINK C MSE E 68 N GLU E 69 1555 1555 1.33 LINK C GLU E 78 N MSE E 79 1555 1555 1.33 LINK C MSE E 79 N THR E 80 1555 1555 1.32 LINK C TYR E 94 N MSE E 95 1555 1555 1.32 LINK C MSE E 95 N PRO E 96 1555 1555 1.34 LINK C TRP F 67 N MSE F 68 1555 1555 1.33 LINK C MSE F 68 N GLU F 69 1555 1555 1.33 LINK C GLU F 78 N MSE F 79 1555 1555 1.33 LINK C MSE F 79 N THR F 80 1555 1555 1.33 LINK C TYR F 94 N MSE F 95 1555 1555 1.33 LINK C MSE F 95 N PRO F 96 1555 1555 1.34 CRYST1 66.704 90.272 156.948 90.00 90.00 90.00 P 21 21 21 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014992 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011078 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006372 0.00000