HEADER TRANSFERASE 01-MAR-10 3LZH OBSLTE 25-MAY-11 3LZH 3R7Z TITLE CRYSTAL STRUCTURE OF AMINOGLYCOSIDE PHOSPHOTRANSFERASE APH(2")- TITLE 2 ID/APH(2")-IVA COMPND MOL_ID: 1; COMPND 2 MOLECULE: APH(2")-ID/APH(2")-IVA; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROCOCCUS CASSELIFLAVUS; SOURCE 3 ORGANISM_TAXID: 37734; SOURCE 4 GENE: APH(2'')-ID; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: P15TV-L KEYWDS AMINOGLYCOSIDE PHOSPHOTRANSFERASE, APH, KINASE, ANTIBIOTIC KEYWDS 2 RESISTANCE, EUKARYOTIC PROTEIN KINASE-LIKE FOLD, TRANSFERASE, KEYWDS 3 STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE INITIATIVE, MIDWEST KEYWDS 4 CENTER FOR STRUCTURAL GENOMICS, MCSG, ONTARIO CENTRE FOR STRUCTURAL KEYWDS 5 PROTEOMICS, OCSP EXPDTA X-RAY DIFFRACTION AUTHOR K.TAN,B.NOCEK,A.U.SINGER,P.J.STOGIOS,E.EVDOKIMOVA,E.EGOROVA,R.DI LEO, AUTHOR 2 H.LI,T.SHAKYA,G.D.WRIGHT,A.JOACHIMIAK,A.M.EDWARDS,A.SAVCHENKO, AUTHOR 3 ONTARIO CENTRE FOR STRUCTURAL PROTEOMICS (OCSP),MIDWEST CENTER FOR AUTHOR 4 STRUCTURAL GENOMICS (MCSG) REVDAT 4 25-MAY-11 3LZH 1 OBSLTE REVDAT 3 02-JUN-10 3LZH 1 AUTHOR REVDAT 2 26-MAY-10 3LZH 1 COMPND REVDAT 1 16-MAR-10 3LZH 0 JRNL AUTH A.U.SINGER,P.J.STOGIOS,E.EVDOKIMOVA,E.EGOROVA,R.DI LEO,H.LI, JRNL AUTH 2 A.JOACHIMIAK,A.M.EDWARDS,A.SAVCHENKO, JRNL AUTH 3 MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG) JRNL TITL CRYSTAL STRUCTURE OF AMINOGLYCOSIDE PHOSPHOTRANSFERASE JRNL TITL 2 APH(2")-ID/APH(2")-IVA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.28 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 24011 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1274 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.06 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1637 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.31 REMARK 3 BIN R VALUE (WORKING SET) : 0.2370 REMARK 3 BIN FREE R VALUE SET COUNT : 79 REMARK 3 BIN FREE R VALUE : 0.2970 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2410 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 226 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.03000 REMARK 3 B22 (A**2) : 0.09000 REMARK 3 B33 (A**2) : -0.12000 REMARK 3 B12 (A**2) : -0.00000 REMARK 3 B13 (A**2) : -0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.185 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.179 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.123 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.340 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.911 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2478 ; 0.025 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3344 ; 1.933 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 298 ; 6.783 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 123 ;36.577 ;25.528 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 460 ;16.285 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;16.321 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 361 ; 0.137 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1873 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1483 ; 1.349 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2411 ; 2.366 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 995 ; 3.539 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 933 ; 5.508 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3LZH COMPLIES WITH FORMAT V. 3.20, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-MAR-10. REMARK 100 THE RCSB ID CODE IS RCSB057918. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-AUG-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97940 REMARK 200 MONOCHROMATOR : SI-111 AND SI-220 CHANNELS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25489 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 6.980 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08800 REMARK 200 FOR THE DATA SET : 34.0400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.3 REMARK 200 DATA REDUNDANCY IN SHELL : 5.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.50800 REMARK 200 FOR SHELL : 5.130 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 295K, PH 7.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.29150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.72800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.58850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.72800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.29150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.58850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 SER A 297 REMARK 465 ILE A 298 REMARK 465 LYS A 299 REMARK 465 ILE A 300 REMARK 465 LYS A 301 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 281 CG CD OE1 OE2 REMARK 470 TRP A 287 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 287 CZ3 CH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 14 CG GLU A 14 CD 0.102 REMARK 500 GLU A 243 CB GLU A 243 CG 0.157 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 147 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 40 19.89 59.61 REMARK 500 ASN A 69 15.69 59.64 REMARK 500 ASN A 196 -0.50 75.44 REMARK 500 ASP A 197 45.56 -140.65 REMARK 500 ASP A 217 71.87 68.95 REMARK 500 SER A 224 -162.28 -168.86 REMARK 500 GLU A 235 115.97 111.55 REMARK 500 ASP A 237 -91.04 -29.55 REMARK 500 GLU A 239 -149.51 -118.79 REMARK 500 LYS A 253 37.90 71.49 REMARK 500 ASP A 256 68.87 -151.94 REMARK 500 LYS A 280 -71.24 -89.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC40088 RELATED DB: TARGETDB DBREF 3LZH A 1 301 UNP Q58M16 Q58M16_ENTCA 1 301 SEQRES 1 A 301 MSE THR THR TYR THR PHE ASP GLN VAL GLU GLU ALA ILE SEQRES 2 A 301 GLU GLN LEU TYR PRO ASP PHE THR ILE ASN THR ILE GLU SEQRES 3 A 301 ILE SER GLY GLU GLY ASN ASP CYS ILE ALA TYR GLU ILE SEQRES 4 A 301 ASN GLY ASN PHE ILE PHE LYS PHE PRO LYS HIS SER ARG SEQRES 5 A 301 ALA SER ILE ASN LEU LEU ASN GLU VAL THR VAL LEU LYS SEQRES 6 A 301 THR ILE HIS ASN GLU LEU SER LEU PRO ILE PRO GLU VAL SEQRES 7 A 301 VAL PHE THR GLY MSE PRO SER GLU MSE CYS GLN MSE SER SEQRES 8 A 301 PHE ALA GLY PHE THR LYS ILE LYS GLY VAL PRO LEU THR SEQRES 9 A 301 PRO LEU LEU LEU LYS ASN LEU PRO LYS GLN SER GLN ASP SEQRES 10 A 301 GLN ALA ALA LYS ASP LEU ALA ARG PHE LEU SER GLU LEU SEQRES 11 A 301 HIS SER ILE ASN ILE SER GLY PHE LYS SER ASN LEU VAL SEQRES 12 A 301 LEU ASP PHE ARG GLU LYS ILE ASN GLU ASP ASN LYS LYS SEQRES 13 A 301 ILE LYS LYS LEU LEU SER ARG GLU LEU LYS GLY HIS GLN SEQRES 14 A 301 MSE LYS LYS VAL ASP ASP PHE TYR ARG ASP ILE LEU ASP SEQRES 15 A 301 ASN GLU ILE TYR PHE LYS TYR TYR PRO CYS LEU ILE HIS SEQRES 16 A 301 ASN ASP PHE SER SER ASP HIS ILE LEU PHE ASP THR GLU SEQRES 17 A 301 LYS ASN THR ILE CYS GLY ILE ILE ASP PHE GLY ASP ALA SEQRES 18 A 301 ALA ILE SER ASP PRO ASP ASN ASP PHE ILE SER LEU MSE SEQRES 19 A 301 GLU ASP ASP GLU GLU TYR GLY MSE GLU PHE VAL SER LYS SEQRES 20 A 301 ILE LEU ASN HIS TYR LYS HIS LYS ASP ILE PRO THR VAL SEQRES 21 A 301 LEU GLU LYS TYR MSE MSE LYS GLU LYS TYR TRP SER PHE SEQRES 22 A 301 GLU LYS ILE ILE TYR GLY LYS GLU TYR GLY TYR MSE ASP SEQRES 23 A 301 TRP TYR GLU GLU GLY LEU ASN GLU ILE ARG SER ILE LYS SEQRES 24 A 301 ILE LYS MODRES 3LZH MSE A 83 MET SELENOMETHIONINE MODRES 3LZH MSE A 87 MET SELENOMETHIONINE MODRES 3LZH MSE A 90 MET SELENOMETHIONINE MODRES 3LZH MSE A 170 MET SELENOMETHIONINE MODRES 3LZH MSE A 234 MET SELENOMETHIONINE MODRES 3LZH MSE A 242 MET SELENOMETHIONINE MODRES 3LZH MSE A 265 MET SELENOMETHIONINE MODRES 3LZH MSE A 266 MET SELENOMETHIONINE MODRES 3LZH MSE A 285 MET SELENOMETHIONINE HET MSE A 83 8 HET MSE A 87 8 HET MSE A 90 8 HET MSE A 170 8 HET MSE A 234 8 HET MSE A 242 8 HET MSE A 265 8 HET MSE A 266 8 HET MSE A 285 8 HET CL A 302 1 HETNAM MSE SELENOMETHIONINE HETNAM CL CHLORIDE ION FORMUL 1 MSE 9(C5 H11 N O2 SE) FORMUL 2 CL CL 1- FORMUL 3 HOH *226(H2 O) HELIX 1 1 THR A 5 TYR A 17 1 13 HELIX 2 2 HIS A 50 HIS A 68 1 19 HELIX 3 3 THR A 104 LEU A 111 1 8 HELIX 4 4 PRO A 112 ILE A 133 1 22 HELIX 5 5 LYS A 139 VAL A 143 5 5 HELIX 6 6 ASP A 145 LEU A 161 1 17 HELIX 7 7 LYS A 166 ASP A 182 1 17 HELIX 8 8 ASN A 183 PHE A 187 5 5 HELIX 9 9 SER A 199 ASP A 201 5 3 HELIX 10 10 ASP A 227 SER A 232 1 6 HELIX 11 11 GLY A 241 TYR A 252 1 12 HELIX 12 12 ASP A 256 GLU A 281 1 26 HELIX 13 13 TYR A 284 ARG A 296 1 13 SHEET 1 A 5 ILE A 25 GLU A 30 0 SHEET 2 A 5 CYS A 34 ILE A 39 -1 O ALA A 36 N GLY A 29 SHEET 3 A 5 PHE A 43 PRO A 48 -1 O PHE A 47 N ILE A 35 SHEET 4 A 5 ALA A 93 THR A 96 -1 O PHE A 95 N ILE A 44 SHEET 5 A 5 VAL A 78 THR A 81 -1 N VAL A 79 O GLY A 94 SHEET 1 B 3 VAL A 101 PRO A 102 0 SHEET 2 B 3 ILE A 203 ASP A 206 -1 O PHE A 205 N VAL A 101 SHEET 3 B 3 THR A 211 ILE A 215 -1 O GLY A 214 N LEU A 204 SHEET 1 C 2 CYS A 192 ILE A 194 0 SHEET 2 C 2 ALA A 222 SER A 224 -1 O SER A 224 N CYS A 192 LINK C GLY A 82 N MSE A 83 1555 1555 1.32 LINK C MSE A 83 N PRO A 84 1555 1555 1.37 LINK C GLU A 86 N MSE A 87 1555 1555 1.33 LINK C MSE A 87 N CYS A 88 1555 1555 1.34 LINK C GLN A 89 N MSE A 90 1555 1555 1.33 LINK C MSE A 90 N SER A 91 1555 1555 1.33 LINK C GLN A 169 N MSE A 170 1555 1555 1.33 LINK C MSE A 170 N LYS A 171 1555 1555 1.34 LINK C LEU A 233 N MSE A 234 1555 1555 1.30 LINK C MSE A 234 N GLU A 235 1555 1555 1.31 LINK C GLY A 241 N MSE A 242 1555 1555 1.33 LINK C MSE A 242 N GLU A 243 1555 1555 1.33 LINK C TYR A 264 N MSE A 265 1555 1555 1.34 LINK C MSE A 265 N MSE A 266 1555 1555 1.34 LINK C MSE A 266 N LYS A 267 1555 1555 1.33 LINK C TYR A 284 N MSE A 285 1555 1555 1.33 LINK C MSE A 285 N ASP A 286 1555 1555 1.33 SITE 1 AC1 4 GLY A 31 ASN A 32 ASP A 33 CYS A 34 CRYST1 56.583 63.177 103.456 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017673 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015829 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009666 0.00000 CONECT 652 654 CONECT 654 652 655 CONECT 655 654 656 658 CONECT 656 655 657 662 CONECT 657 656 CONECT 658 655 659 CONECT 659 658 660 CONECT 660 659 661 CONECT 661 660 CONECT 662 656 CONECT 677 684 CONECT 684 677 685 CONECT 685 684 686 688 CONECT 686 685 687 692 CONECT 687 686 CONECT 688 685 689 CONECT 689 688 690 CONECT 690 689 691 CONECT 691 690 CONECT 692 686 CONECT 700 707 CONECT 707 700 708 CONECT 708 707 709 711 CONECT 709 708 710 715 CONECT 710 709 CONECT 711 708 712 CONECT 712 711 713 CONECT 713 712 714 CONECT 714 713 CONECT 715 709 CONECT 1339 1346 CONECT 1346 1339 1347 CONECT 1347 1346 1348 1350 CONECT 1348 1347 1349 1354 CONECT 1349 1348 CONECT 1350 1347 1351 CONECT 1351 1350 1352 CONECT 1352 1351 1353 CONECT 1353 1352 CONECT 1354 1348 CONECT 1874 1880 CONECT 1880 1874 1881 CONECT 1881 1880 1882 1884 CONECT 1882 1881 1883 1888 CONECT 1883 1882 CONECT 1884 1881 1885 CONECT 1885 1884 1886 CONECT 1886 1885 1887 CONECT 1887 1886 CONECT 1888 1882 CONECT 1945 1947 CONECT 1947 1945 1948 CONECT 1948 1947 1949 1951 CONECT 1949 1948 1950 1955 CONECT 1950 1949 CONECT 1951 1948 1952 CONECT 1952 1951 1953 CONECT 1953 1952 1954 CONECT 1954 1953 CONECT 1955 1949 CONECT 2136 2146 CONECT 2146 2136 2147 CONECT 2147 2146 2148 2150 CONECT 2148 2147 2149 2154 CONECT 2149 2148 CONECT 2150 2147 2151 CONECT 2151 2150 2152 CONECT 2152 2151 2153 CONECT 2153 2152 CONECT 2154 2148 2155 CONECT 2155 2154 2156 2158 CONECT 2156 2155 2157 2162 CONECT 2157 2156 CONECT 2158 2155 2159 CONECT 2159 2158 2160 CONECT 2160 2159 2161 CONECT 2161 2160 CONECT 2162 2156 CONECT 2314 2324 CONECT 2324 2314 2325 CONECT 2325 2324 2326 2328 CONECT 2326 2325 2327 2332 CONECT 2327 2326 CONECT 2328 2325 2329 CONECT 2329 2328 2330 CONECT 2330 2329 2331 CONECT 2331 2330 CONECT 2332 2326 MASTER 328 0 10 13 10 0 1 6 2637 1 88 24 END