HEADER TRANSFERASE 04-MAR-10 3M16 TITLE STRUCTURE OF A TRANSALDOLASE FROM OLEISPIRA ANTARCTICA COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSALDOLASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.2.1.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: OLEISPIRA ANTARCTICA; SOURCE 3 ORGANISM_TAXID: 188908; SOURCE 4 GENE: OLEI02190; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-RIPL; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: P15TV LIC KEYWDS OLEISPIRA ANTARCTICA, TRANSALDOLASE, DIMER, MOLECULAR REPLACEMENT, KEYWDS 2 SWISS-MODEL, STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE KEYWDS 3 INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, KEYWDS 4 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.U.SINGER,O.KAGAN,R.ZHANG,A.JOACHIMIAK,A.M.EDWARDS,A.SAVCHENKO, AUTHOR 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG) REVDAT 6 06-NOV-24 3M16 1 REMARK REVDAT 5 22-NOV-23 3M16 1 REMARK REVDAT 4 06-SEP-23 3M16 1 DBREF LINK REVDAT 3 07-AUG-13 3M16 1 JRNL REVDAT 2 24-JUL-13 3M16 1 JRNL VERSN REVDAT 1 23-JUN-10 3M16 0 JRNL AUTH M.KUBE,T.N.CHERNIKOVA,Y.AL-RAMAHI,A.BELOQUI,N.LOPEZ-CORTEZ, JRNL AUTH 2 M.E.GUAZZARONI,H.J.HEIPIEPER,S.KLAGES,O.R.KOTSYURBENKO, JRNL AUTH 3 I.LANGER,T.Y.NECHITAYLO,H.LUNSDORF,M.FERNANDEZ,S.JUAREZ, JRNL AUTH 4 S.CIORDIA,A.SINGER,O.KAGAN,O.EGOROVA,P.ALAIN PETIT, JRNL AUTH 5 P.STOGIOS,Y.KIM,A.TCHIGVINTSEV,R.FLICK,R.DENARO,M.GENOVESE, JRNL AUTH 6 J.P.ALBAR,O.N.REVA,M.MARTINEZ-GOMARIZ,H.TRAN,M.FERRER, JRNL AUTH 7 A.SAVCHENKO,A.F.YAKUNIN,M.M.YAKIMOV,O.V.GOLYSHINA, JRNL AUTH 8 R.REINHARDT,P.N.GOLYSHIN JRNL TITL GENOME SEQUENCE AND FUNCTIONAL GENOMIC ANALYSIS OF THE JRNL TITL 2 OIL-DEGRADING BACTERIUM OLEISPIRA ANTARCTICA. JRNL REF NAT COMMUN V. 4 2156 2013 JRNL REFN ESSN 2041-1723 JRNL PMID 23877221 JRNL DOI 10.1038/NCOMMS3156 REMARK 2 REMARK 2 RESOLUTION. 2.79 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.79 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.78 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 17475 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 947 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.79 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1255 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.88 REMARK 3 BIN R VALUE (WORKING SET) : 0.3530 REMARK 3 BIN FREE R VALUE SET COUNT : 64 REMARK 3 BIN FREE R VALUE : 0.3470 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2503 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 13 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 71.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.04000 REMARK 3 B22 (A**2) : 0.04000 REMARK 3 B33 (A**2) : -0.07000 REMARK 3 B12 (A**2) : 0.02000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.300 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.269 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.219 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.472 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2540 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3436 ; 1.468 ; 1.964 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 323 ; 6.614 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 107 ;38.726 ;25.514 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 458 ;20.289 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;23.341 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 405 ; 0.098 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1862 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1297 ; 0.257 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1780 ; 0.322 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 117 ; 0.168 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 29 ; 0.300 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 1 ; 0.065 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3M16 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-MAR-10. REMARK 100 THE DEPOSITION ID IS D_1000057977. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JUN-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97942, 0.97972 REMARK 200 MONOCHROMATOR : SI-111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18469 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 35.780 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 26.20 REMARK 200 R MERGE (I) : 0.08800 REMARK 200 R SYM (I) : 0.08800 REMARK 200 FOR THE DATA SET : 57.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 25.80 REMARK 200 R MERGE FOR SHELL (I) : 0.73400 REMARK 200 R SYM FOR SHELL (I) : 0.73400 REMARK 200 FOR SHELL : 4.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1ONR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 74.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4M SODIUM FORMATE, 3MM MAGNESIUM REMARK 280 CHLORIDE, CRYOPROTECTED IN PARATONE-N OIL (HAMPTON), VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 294K, PH 8.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 39.90800 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 79.81600 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 59.86200 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 99.77000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 19.95400 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 39.90800 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 79.81600 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 99.77000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 59.86200 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 19.95400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -19.95400 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 406 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 4 REMARK 465 ASP A 70 REMARK 465 SER A 328 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 6 -55.92 109.31 REMARK 500 ASN A 7 166.57 172.94 REMARK 500 GLU A 58 -17.89 -44.61 REMARK 500 ASP A 61 -83.33 -40.10 REMARK 500 ASP A 105 116.26 -38.83 REMARK 500 ARG A 135 2.06 -68.54 REMARK 500 ASN A 196 -4.29 -152.22 REMARK 500 SER A 200 -1.14 -152.35 REMARK 500 SER A 233 61.12 65.44 REMARK 500 THR A 276 -11.27 -141.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC40630 RELATED DB: TARGETDB DBREF 3M16 A 0 328 PDB 3M16 3M16 0 328 SEQRES 1 A 329 GLY MSE SER ALA GLN ALA LYS ASN LYS LEU GLU ALA LEU SEQRES 2 A 329 LYS ALA MSE THR THR VAL VAL ALA ASP THR GLY ASP ILE SEQRES 3 A 329 GLU ALA ILE LYS GLN PHE LYS PRO VAL ASP ALA THR THR SEQRES 4 A 329 ASN PRO SER LEU ILE LEU LYS ALA ALA LYS LEU ALA ASN SEQRES 5 A 329 TYR GLN HIS LEU ILE GLU GLU ALA ILE ASP TRP ALA LEU SEQRES 6 A 329 GLN ILE LYS GLY ASN ASP LYS ASN SER GLN THR THR LEU SEQRES 7 A 329 GLU ASN VAL GLY ASP LYS LEU ALA VAL ASN ILE GLY CYS SEQRES 8 A 329 GLU VAL LEU THR SER ILE PRO GLY VAL ILE SER THR GLU SEQRES 9 A 329 VAL ASP ALA ARG LEU SER PHE ASP THR GLN ALA THR VAL SEQRES 10 A 329 ALA LYS ALA ARG LYS LEU ILE ARG LEU TYR GLN ASP ALA SEQRES 11 A 329 GLY ILE ASP SER ASP ARG ILE LEU ILE LYS ILE ALA SER SEQRES 12 A 329 THR TRP GLU GLY ILE GLN ALA ALA LYS ILE LEU GLU ALA SEQRES 13 A 329 GLU GLY ILE HIS CYS ASN LEU THR LEU LEU PHE HIS PHE SEQRES 14 A 329 ALA GLN ALA GLN ALA CYS ALA GLU ALA GLY THR THR LEU SEQRES 15 A 329 ILE SER PRO PHE VAL GLY ARG ILE LEU ASP TRP TYR LYS SEQRES 16 A 329 ALA ASN SER GLY GLN SER GLU TYR SER ALA SER GLU ASP SEQRES 17 A 329 PRO GLY VAL VAL SER VAL THR GLU ILE TYR ASN PHE TYR SEQRES 18 A 329 LYS SER HIS GLY PHE LYS THR ILE VAL MSE GLY ALA SER SEQRES 19 A 329 PHE ARG ASN THR GLY GLU ILE GLU GLU LEU ALA GLY CYS SEQRES 20 A 329 ASP ARG LEU THR ILE SER PRO GLU LEU LEU ALA GLN LEU SEQRES 21 A 329 GLU ALA ASP THR SER PRO LEU GLU GLN LYS LEU PHE PRO SEQRES 22 A 329 ILE LYS GLU THR LYS ASP THR PRO GLU LEU LEU THR GLU SEQRES 23 A 329 ALA SER PHE ARG TRP ALA MSE ASN ASN ASP PRO MSE ALA SEQRES 24 A 329 HIS ASP LYS LEU ALA ASP GLY ILE ARG ARG PHE ALA ALA SEQRES 25 A 329 ASP GLN VAL THR LEU GLU SER MSE LEU SER LYS LYS ILE SEQRES 26 A 329 SER GLN ARG SER MODRES 3M16 MSE A 1 MET SELENOMETHIONINE MODRES 3M16 MSE A 15 MET SELENOMETHIONINE MODRES 3M16 MSE A 230 MET SELENOMETHIONINE MODRES 3M16 MSE A 292 MET SELENOMETHIONINE MODRES 3M16 MSE A 297 MET SELENOMETHIONINE MODRES 3M16 MSE A 319 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 15 8 HET MSE A 230 8 HET MSE A 292 8 HET MSE A 297 8 HET MSE A 319 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 2 HOH *13(H2 O) HELIX 1 1 ASN A 7 LYS A 13 1 7 HELIX 2 2 ASP A 24 LYS A 32 1 9 HELIX 3 3 ASN A 39 LYS A 48 1 10 HELIX 4 4 LEU A 49 ASN A 51 5 3 HELIX 5 5 TYR A 52 LYS A 67 1 16 HELIX 6 6 GLN A 74 THR A 94 1 21 HELIX 7 7 ASP A 105 SER A 109 5 5 HELIX 8 8 ASP A 111 ALA A 129 1 19 HELIX 9 9 ASP A 132 ASP A 134 5 3 HELIX 10 10 THR A 143 GLU A 156 1 14 HELIX 11 11 HIS A 167 ALA A 177 1 11 HELIX 12 12 PHE A 185 ALA A 195 1 11 HELIX 13 13 ASP A 207 HIS A 223 1 17 HELIX 14 14 ASN A 236 GLU A 242 1 7 HELIX 15 15 SER A 252 ASP A 262 1 11 HELIX 16 16 THR A 284 ASP A 295 1 12 HELIX 17 17 ASP A 295 GLN A 326 1 32 SHEET 1 A 9 THR A 17 ASP A 21 0 SHEET 2 A 9 ASP A 35 THR A 37 1 O THR A 37 N ALA A 20 SHEET 3 A 9 ILE A 100 GLU A 103 1 O SER A 101 N ALA A 36 SHEET 4 A 9 ILE A 136 ALA A 141 1 O LYS A 139 N THR A 102 SHEET 5 A 9 CYS A 160 LEU A 165 1 O ASN A 161 N ILE A 138 SHEET 6 A 9 LEU A 181 PRO A 184 1 O LEU A 181 N LEU A 162 SHEET 7 A 9 ILE A 228 GLY A 231 1 O ILE A 228 N ILE A 182 SHEET 8 A 9 ARG A 248 ILE A 251 1 O THR A 250 N GLY A 231 SHEET 9 A 9 THR A 17 ASP A 21 1 N VAL A 19 O LEU A 249 LINK C GLY A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N SER A 2 1555 1555 1.34 LINK C ALA A 14 N MSE A 15 1555 1555 1.33 LINK C MSE A 15 N THR A 16 1555 1555 1.34 LINK C VAL A 229 N MSE A 230 1555 1555 1.33 LINK C MSE A 230 N GLY A 231 1555 1555 1.33 LINK C ALA A 291 N MSE A 292 1555 1555 1.31 LINK C MSE A 292 N ASN A 293 1555 1555 1.32 LINK C PRO A 296 N MSE A 297 1555 1555 1.33 LINK C MSE A 297 N ALA A 298 1555 1555 1.33 LINK C SER A 318 N MSE A 319 1555 1555 1.32 LINK C MSE A 319 N LEU A 320 1555 1555 1.32 CRYST1 143.105 143.105 119.724 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006988 0.004034 0.000000 0.00000 SCALE2 0.000000 0.008069 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008353 0.00000