HEADER OXIDOREDUCTASE 05-MAR-10 3M1L TITLE CRYSTAL STRUCTURE OF A C-TERMINAL TRUNACTED MUTANT OF A PUTATIVE TITLE 2 KETOACYL REDUCTASE (FABG4) FROM MYCOBACTERIUM TUBERCULOSIS H37RV AT TITLE 3 2.5 ANGSTROM RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 17-448; COMPND 5 SYNONYM: PUTATIVE KETOACYL REDUCTASE, PROBABLE 3-OXOACYL-[ACYL- COMPND 6 CARRIER PROTEIN] REDUCTASE FABG4 (3-KETOACYL-ACYL CARRIER PROTEIN COMPND 7 REDUCTASE); COMPND 8 EC: 1.1.1.100; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 STRAIN: H37RV; SOURCE 5 GENE: RV0242C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: M15(PREP4); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PQE30 KEYWDS SHORT CHAIN DEHYDROGENASE, KETOACYL REDUCTASE, ROSSMANN FOLD, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR D.DUTTA,S.BHATTACHARYYA,B.SAHA,A.K.DAS REVDAT 4 20-MAR-24 3M1L 1 REMARK REVDAT 3 16-SEP-20 3M1L 1 TITLE REMARK REVDAT 2 12-FEB-14 3M1L 1 JRNL VERSN REVDAT 1 22-DEC-10 3M1L 0 JRNL AUTH D.DUTTA,S.BHATTACHARYYA,S.MUKHERJEE,B.SAHA,A.K.DAS JRNL TITL CRYSTAL STRUCTURE OF FABG4 FROM MYCOBACTERIUM TUBERCULOSIS JRNL TITL 2 REVEALS THE IMPORTANCE OF C-TERMINAL RESIDUES IN JRNL TITL 3 KETOREDUCTASE ACTIVITY JRNL REF J.STRUCT.BIOL. V. 174 147 2011 JRNL REFN ISSN 1047-8477 JRNL PMID 21081168 JRNL DOI 10.1016/J.JSB.2010.11.012 REMARK 2 REMARK 2 RESOLUTION. 2.52 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0095 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.52 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.95 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 27784 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1138 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.52 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.58 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1736 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.63 REMARK 3 BIN R VALUE (WORKING SET) : 0.2620 REMARK 3 BIN FREE R VALUE SET COUNT : 80 REMARK 3 BIN FREE R VALUE : 0.3340 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5258 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 207 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 46.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.45000 REMARK 3 B22 (A**2) : 1.73000 REMARK 3 B33 (A**2) : -3.18000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.502 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.280 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.223 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 22.904 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.913 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5361 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7286 ; 1.652 ; 1.971 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 722 ; 6.470 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 202 ;35.731 ;23.366 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 822 ;18.335 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 43 ;21.281 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 866 ; 0.102 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4035 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3582 ; 0.778 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5686 ; 1.495 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1779 ; 2.399 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1600 ; 4.113 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 33 A 447 REMARK 3 ORIGIN FOR THE GROUP (A): 46.6976 76.5580 8.1905 REMARK 3 T TENSOR REMARK 3 T11: 0.0916 T22: 0.0231 REMARK 3 T33: 0.0733 T12: -0.0124 REMARK 3 T13: 0.0024 T23: -0.0181 REMARK 3 L TENSOR REMARK 3 L11: 1.6955 L22: 1.2903 REMARK 3 L33: 1.9804 L12: -0.1342 REMARK 3 L13: 0.6434 L23: -0.4644 REMARK 3 S TENSOR REMARK 3 S11: -0.1280 S12: 0.0507 S13: 0.2035 REMARK 3 S21: -0.0916 S22: 0.0963 S23: -0.0465 REMARK 3 S31: -0.0099 S32: 0.0858 S33: 0.0317 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 33 B 447 REMARK 3 ORIGIN FOR THE GROUP (A): 43.7011 69.7746 43.0860 REMARK 3 T TENSOR REMARK 3 T11: 0.1444 T22: 0.0262 REMARK 3 T33: 0.0701 T12: 0.0089 REMARK 3 T13: 0.0059 T23: -0.0078 REMARK 3 L TENSOR REMARK 3 L11: 1.7998 L22: 0.7718 REMARK 3 L33: 2.6008 L12: 0.1558 REMARK 3 L13: 1.0014 L23: -0.1653 REMARK 3 S TENSOR REMARK 3 S11: 0.0267 S12: -0.2020 S13: 0.1221 REMARK 3 S21: 0.1957 S22: 0.0144 S23: 0.0562 REMARK 3 S31: 0.0047 S32: -0.1827 S33: -0.0411 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3M1L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-MAR-10. REMARK 100 THE DEPOSITION ID IS D_1000057992. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JAN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRROR REMARK 200 OPTICS : VARIMAX MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27834 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.520 REMARK 200 RESOLUTION RANGE LOW (A) : 19.950 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.10100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.52 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 6.00 REMARK 200 R MERGE FOR SHELL (I) : 0.56100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M SODIUM ACETATE, 15% (W/V) REMARK 280 PEG3350, PH 5.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.53800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 76.97650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.24850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 76.97650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.53800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.24850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 17 REMARK 465 PRO A 18 REMARK 465 GLY A 19 REMARK 465 SER A 20 REMARK 465 PHE A 21 REMARK 465 LEU A 22 REMARK 465 ALA A 23 REMARK 465 ARG A 24 REMARK 465 GLN A 25 REMARK 465 LEU A 26 REMARK 465 GLY A 27 REMARK 465 VAL A 28 REMARK 465 PRO A 29 REMARK 465 GLN A 30 REMARK 465 PRO A 31 REMARK 465 GLU A 32 REMARK 465 ASN A 73 REMARK 465 ASN A 74 REMARK 465 LEU A 75 REMARK 465 GLY A 76 REMARK 465 GLY A 77 REMARK 465 ARG A 78 REMARK 465 TRP A 79 REMARK 465 ALA A 80 REMARK 465 ARG A 300 REMARK 465 ASP A 301 REMARK 465 LYS A 302 REMARK 465 LEU A 303 REMARK 465 LEU A 304 REMARK 465 ALA A 305 REMARK 465 ASN A 306 REMARK 465 MET A 307 REMARK 465 ASP A 308 REMARK 465 ASP A 309 REMARK 465 ALA A 310 REMARK 465 ILE A 348 REMARK 465 ALA A 349 REMARK 465 GLY A 350 REMARK 465 ILE A 351 REMARK 465 ALA A 352 REMARK 465 GLY A 353 REMARK 465 ASN A 354 REMARK 465 ARG A 355 REMARK 465 GLY A 356 REMARK 465 THR A 395 REMARK 465 GLN A 396 REMARK 465 MET A 397 REMARK 465 THR A 398 REMARK 465 ALA A 399 REMARK 465 ALA A 400 REMARK 465 ILE A 401 REMARK 465 PRO A 402 REMARK 465 LEU A 403 REMARK 465 ALA A 404 REMARK 465 THR A 405 REMARK 465 ARG A 406 REMARK 465 GLU A 407 REMARK 465 VAL A 408 REMARK 465 GLY A 409 REMARK 465 ARG A 410 REMARK 465 ARG A 411 REMARK 465 LEU A 412 REMARK 465 ASN A 413 REMARK 465 SER A 414 REMARK 465 LEU A 415 REMARK 465 LEU A 416 REMARK 465 GLN A 417 REMARK 465 GLY A 448 REMARK 465 GLY B 17 REMARK 465 PRO B 18 REMARK 465 GLY B 19 REMARK 465 SER B 20 REMARK 465 PHE B 21 REMARK 465 LEU B 22 REMARK 465 ALA B 23 REMARK 465 ARG B 24 REMARK 465 GLN B 25 REMARK 465 LEU B 26 REMARK 465 GLY B 27 REMARK 465 VAL B 28 REMARK 465 PRO B 29 REMARK 465 GLN B 30 REMARK 465 PRO B 31 REMARK 465 GLU B 32 REMARK 465 GLY B 72 REMARK 465 ASN B 73 REMARK 465 ASN B 74 REMARK 465 LEU B 75 REMARK 465 GLY B 76 REMARK 465 GLY B 77 REMARK 465 ARG B 78 REMARK 465 TRP B 79 REMARK 465 ALA B 80 REMARK 465 ASP B 81 REMARK 465 ARG B 300 REMARK 465 ASP B 301 REMARK 465 LYS B 302 REMARK 465 LEU B 303 REMARK 465 LEU B 304 REMARK 465 ALA B 305 REMARK 465 ASN B 306 REMARK 465 MET B 307 REMARK 465 ASP B 308 REMARK 465 ASP B 309 REMARK 465 ALA B 310 REMARK 465 ALA B 349 REMARK 465 GLY B 350 REMARK 465 ILE B 351 REMARK 465 ALA B 352 REMARK 465 GLY B 353 REMARK 465 ASN B 354 REMARK 465 ARG B 355 REMARK 465 GLY B 356 REMARK 465 THR B 395 REMARK 465 GLN B 396 REMARK 465 MET B 397 REMARK 465 THR B 398 REMARK 465 ALA B 399 REMARK 465 ALA B 400 REMARK 465 ILE B 401 REMARK 465 PRO B 402 REMARK 465 LEU B 403 REMARK 465 ALA B 404 REMARK 465 THR B 405 REMARK 465 ARG B 406 REMARK 465 GLU B 407 REMARK 465 VAL B 408 REMARK 465 GLY B 409 REMARK 465 ARG B 410 REMARK 465 ARG B 411 REMARK 465 LEU B 412 REMARK 465 ASN B 413 REMARK 465 SER B 414 REMARK 465 LEU B 415 REMARK 465 LEU B 416 REMARK 465 GLN B 417 REMARK 465 GLY B 418 REMARK 465 GLY B 448 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG1 THR B 219 O ASN B 295 1.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 39 -141.01 45.08 REMARK 500 THR A 45 39.25 -81.87 REMARK 500 THR A 125 109.77 -34.57 REMARK 500 ALA A 249 -128.13 44.54 REMARK 500 HIS A 285 36.74 -141.01 REMARK 500 ILE A 298 62.25 -115.16 REMARK 500 LEU A 320 -60.06 -129.07 REMARK 500 ALA B 39 -149.03 43.25 REMARK 500 THR B 45 64.32 -115.74 REMARK 500 LYS B 209 64.80 -115.33 REMARK 500 ALA B 249 -119.18 46.66 REMARK 500 HIS B 285 25.18 -142.84 REMARK 500 LEU B 320 -53.01 -122.17 REMARK 500 GLU B 338 109.72 -31.87 REMARK 500 PRO B 390 -155.57 -81.91 REMARK 500 ILE B 393 -108.14 -134.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ARG A 38 ALA A 39 149.50 REMARK 500 SER A 346 SER A 347 147.78 REMARK 500 ALA B 296 GLY B 297 -142.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 1 DBREF 3M1L A 17 448 UNP O53665 O53665_MYCTU 17 448 DBREF 3M1L B 17 448 UNP O53665 O53665_MYCTU 17 448 SEQRES 1 A 432 GLY PRO GLY SER PHE LEU ALA ARG GLN LEU GLY VAL PRO SEQRES 2 A 432 GLN PRO GLU THR LEU ARG ARG TYR ARG ALA GLY GLU PRO SEQRES 3 A 432 PRO LEU THR GLY SER LEU LEU ILE GLY GLY ALA GLY ARG SEQRES 4 A 432 VAL VAL GLU PRO LEU ARG ALA ALA LEU GLU LYS ASP TYR SEQRES 5 A 432 ASP LEU VAL GLY ASN ASN LEU GLY GLY ARG TRP ALA ASP SEQRES 6 A 432 SER PHE GLY GLY LEU VAL PHE ASP ALA THR GLY ILE THR SEQRES 7 A 432 GLU PRO ALA GLY LEU LYS GLY LEU HIS GLU PHE PHE THR SEQRES 8 A 432 PRO VAL LEU ARG ASN LEU GLY ARG CYS GLY ARG VAL VAL SEQRES 9 A 432 VAL VAL GLY GLY THR PRO GLU ALA ALA ALA SER THR ASN SEQRES 10 A 432 GLU ARG ILE ALA GLN ARG ALA LEU GLU GLY PHE THR ARG SEQRES 11 A 432 SER LEU GLY LYS GLU LEU ARG ARG GLY ALA THR THR ALA SEQRES 12 A 432 LEU VAL TYR LEU SER PRO ASP ALA LYS PRO ALA ALA THR SEQRES 13 A 432 GLY LEU GLU SER THR MET ARG PHE LEU LEU SER ALA LYS SEQRES 14 A 432 SER ALA TYR VAL ASP GLY GLN VAL PHE SER VAL GLY ALA SEQRES 15 A 432 ASP ASP SER THR PRO PRO ALA ASP TRP GLU LYS PRO LEU SEQRES 16 A 432 ASP GLY LYS VAL ALA ILE VAL THR GLY ALA ALA ARG GLY SEQRES 17 A 432 ILE GLY ALA THR ILE ALA GLU VAL PHE ALA ARG ASP GLY SEQRES 18 A 432 ALA HIS VAL VAL ALA ILE ASP VAL GLU SER ALA ALA GLU SEQRES 19 A 432 ASN LEU ALA GLU THR ALA SER LYS VAL GLY GLY THR ALA SEQRES 20 A 432 LEU TRP LEU ASP VAL THR ALA ASP ASP ALA VAL ASP LYS SEQRES 21 A 432 ILE SER GLU HIS LEU ARG ASP HIS HIS GLY GLY LYS ALA SEQRES 22 A 432 ASP ILE LEU VAL ASN ASN ALA GLY ILE THR ARG ASP LYS SEQRES 23 A 432 LEU LEU ALA ASN MET ASP ASP ALA ARG TRP ASP ALA VAL SEQRES 24 A 432 LEU ALA VAL ASN LEU LEU ALA PRO LEU ARG LEU THR GLU SEQRES 25 A 432 GLY LEU VAL GLY ASN GLY SER ILE GLY GLU GLY GLY ARG SEQRES 26 A 432 VAL ILE GLY LEU SER SER ILE ALA GLY ILE ALA GLY ASN SEQRES 27 A 432 ARG GLY GLN THR ASN TYR ALA THR THR LYS ALA GLY MET SEQRES 28 A 432 ILE GLY ILE THR GLN ALA LEU ALA PRO GLY LEU ALA ALA SEQRES 29 A 432 LYS GLY ILE THR ILE ASN ALA VAL ALA PRO GLY PHE ILE SEQRES 30 A 432 GLU THR GLN MET THR ALA ALA ILE PRO LEU ALA THR ARG SEQRES 31 A 432 GLU VAL GLY ARG ARG LEU ASN SER LEU LEU GLN GLY GLY SEQRES 32 A 432 GLN PRO VAL ASP VAL ALA GLU ALA ILE ALA TYR PHE ALA SEQRES 33 A 432 SER PRO ALA SER ASN ALA VAL THR GLY ASN VAL ILE ARG SEQRES 34 A 432 VAL CYS GLY SEQRES 1 B 432 GLY PRO GLY SER PHE LEU ALA ARG GLN LEU GLY VAL PRO SEQRES 2 B 432 GLN PRO GLU THR LEU ARG ARG TYR ARG ALA GLY GLU PRO SEQRES 3 B 432 PRO LEU THR GLY SER LEU LEU ILE GLY GLY ALA GLY ARG SEQRES 4 B 432 VAL VAL GLU PRO LEU ARG ALA ALA LEU GLU LYS ASP TYR SEQRES 5 B 432 ASP LEU VAL GLY ASN ASN LEU GLY GLY ARG TRP ALA ASP SEQRES 6 B 432 SER PHE GLY GLY LEU VAL PHE ASP ALA THR GLY ILE THR SEQRES 7 B 432 GLU PRO ALA GLY LEU LYS GLY LEU HIS GLU PHE PHE THR SEQRES 8 B 432 PRO VAL LEU ARG ASN LEU GLY ARG CYS GLY ARG VAL VAL SEQRES 9 B 432 VAL VAL GLY GLY THR PRO GLU ALA ALA ALA SER THR ASN SEQRES 10 B 432 GLU ARG ILE ALA GLN ARG ALA LEU GLU GLY PHE THR ARG SEQRES 11 B 432 SER LEU GLY LYS GLU LEU ARG ARG GLY ALA THR THR ALA SEQRES 12 B 432 LEU VAL TYR LEU SER PRO ASP ALA LYS PRO ALA ALA THR SEQRES 13 B 432 GLY LEU GLU SER THR MET ARG PHE LEU LEU SER ALA LYS SEQRES 14 B 432 SER ALA TYR VAL ASP GLY GLN VAL PHE SER VAL GLY ALA SEQRES 15 B 432 ASP ASP SER THR PRO PRO ALA ASP TRP GLU LYS PRO LEU SEQRES 16 B 432 ASP GLY LYS VAL ALA ILE VAL THR GLY ALA ALA ARG GLY SEQRES 17 B 432 ILE GLY ALA THR ILE ALA GLU VAL PHE ALA ARG ASP GLY SEQRES 18 B 432 ALA HIS VAL VAL ALA ILE ASP VAL GLU SER ALA ALA GLU SEQRES 19 B 432 ASN LEU ALA GLU THR ALA SER LYS VAL GLY GLY THR ALA SEQRES 20 B 432 LEU TRP LEU ASP VAL THR ALA ASP ASP ALA VAL ASP LYS SEQRES 21 B 432 ILE SER GLU HIS LEU ARG ASP HIS HIS GLY GLY LYS ALA SEQRES 22 B 432 ASP ILE LEU VAL ASN ASN ALA GLY ILE THR ARG ASP LYS SEQRES 23 B 432 LEU LEU ALA ASN MET ASP ASP ALA ARG TRP ASP ALA VAL SEQRES 24 B 432 LEU ALA VAL ASN LEU LEU ALA PRO LEU ARG LEU THR GLU SEQRES 25 B 432 GLY LEU VAL GLY ASN GLY SER ILE GLY GLU GLY GLY ARG SEQRES 26 B 432 VAL ILE GLY LEU SER SER ILE ALA GLY ILE ALA GLY ASN SEQRES 27 B 432 ARG GLY GLN THR ASN TYR ALA THR THR LYS ALA GLY MET SEQRES 28 B 432 ILE GLY ILE THR GLN ALA LEU ALA PRO GLY LEU ALA ALA SEQRES 29 B 432 LYS GLY ILE THR ILE ASN ALA VAL ALA PRO GLY PHE ILE SEQRES 30 B 432 GLU THR GLN MET THR ALA ALA ILE PRO LEU ALA THR ARG SEQRES 31 B 432 GLU VAL GLY ARG ARG LEU ASN SER LEU LEU GLN GLY GLY SEQRES 32 B 432 GLN PRO VAL ASP VAL ALA GLU ALA ILE ALA TYR PHE ALA SEQRES 33 B 432 SER PRO ALA SER ASN ALA VAL THR GLY ASN VAL ILE ARG SEQRES 34 B 432 VAL CYS GLY HET ACT A 1 4 HETNAM ACT ACETATE ION FORMUL 3 ACT C2 H3 O2 1- FORMUL 4 HOH *207(H2 O) HELIX 1 1 VAL A 56 GLU A 65 1 10 HELIX 2 2 GLU A 95 GLY A 98 5 4 HELIX 3 3 LEU A 99 THR A 107 1 9 HELIX 4 4 VAL A 109 ARG A 111 5 3 HELIX 5 5 PRO A 126 ALA A 129 5 4 HELIX 6 6 SER A 131 GLY A 149 1 19 HELIX 7 7 LYS A 150 LEU A 152 5 3 HELIX 8 8 ALA A 171 GLY A 173 5 3 HELIX 9 9 LEU A 174 LEU A 182 1 9 HELIX 10 10 SER A 183 ALA A 187 5 5 HELIX 11 11 ARG A 223 ASP A 236 1 14 HELIX 12 12 VAL A 245 SER A 247 5 3 HELIX 13 13 ALA A 248 VAL A 259 1 12 HELIX 14 14 ASP A 272 GLY A 286 1 15 HELIX 15 15 ARG A 311 LEU A 320 1 10 HELIX 16 16 LEU A 320 ASN A 333 1 14 HELIX 17 17 GLN A 357 ALA A 380 1 24 HELIX 18 18 GLN A 420 SER A 433 1 14 HELIX 19 19 PRO A 434 ASN A 437 5 4 HELIX 20 20 VAL B 56 GLU B 65 1 10 HELIX 21 21 GLU B 95 GLY B 98 5 4 HELIX 22 22 LEU B 99 THR B 107 1 9 HELIX 23 23 VAL B 109 LEU B 113 5 5 HELIX 24 24 PRO B 126 ALA B 129 5 4 HELIX 25 25 SER B 131 GLY B 149 1 19 HELIX 26 26 LYS B 150 LEU B 152 5 3 HELIX 27 27 ALA B 171 GLY B 173 5 3 HELIX 28 28 LEU B 174 LEU B 182 1 9 HELIX 29 29 SER B 183 ALA B 187 5 5 HELIX 30 30 GLY B 224 ASP B 236 1 13 HELIX 31 31 VAL B 245 ALA B 248 5 4 HELIX 32 32 ALA B 249 VAL B 259 1 11 HELIX 33 33 ASP B 272 HIS B 285 1 14 HELIX 34 34 ARG B 311 LEU B 320 1 10 HELIX 35 35 LEU B 320 ASN B 333 1 14 HELIX 36 36 GLN B 357 ALA B 380 1 24 HELIX 37 37 GLN B 420 SER B 433 1 14 HELIX 38 38 PRO B 434 ASN B 437 5 4 SHEET 1 A 5 SER A 47 GLY A 52 0 SHEET 2 A 5 PHE A 83 ASP A 89 1 O GLY A 84 N SER A 47 SHEET 3 A 5 LEU A 113 GLY A 124 1 O GLY A 114 N PHE A 83 SHEET 4 A 5 THR A 157 LEU A 163 1 O VAL A 161 N GLY A 123 SHEET 5 A 5 GLN A 192 VAL A 196 1 O VAL A 196 N TYR A 162 SHEET 1 B 7 THR A 262 TRP A 265 0 SHEET 2 B 7 HIS A 239 ASP A 244 1 N ALA A 242 O THR A 262 SHEET 3 B 7 VAL A 215 VAL A 218 1 N ALA A 216 O VAL A 241 SHEET 4 B 7 ILE A 291 ASN A 294 1 O ILE A 291 N ILE A 217 SHEET 5 B 7 GLY A 340 LEU A 345 1 O ARG A 341 N LEU A 292 SHEET 6 B 7 ILE A 383 PRO A 390 1 O THR A 384 N VAL A 342 SHEET 7 B 7 VAL A 443 VAL A 446 1 O ILE A 444 N ALA A 389 SHEET 1 C 5 LEU B 48 GLY B 52 0 SHEET 2 C 5 GLY B 85 ASP B 89 1 O VAL B 87 N LEU B 49 SHEET 3 C 5 ARG B 118 GLY B 124 1 O ARG B 118 N LEU B 86 SHEET 4 C 5 THR B 157 LEU B 163 1 O VAL B 161 N GLY B 123 SHEET 5 C 5 GLN B 192 VAL B 196 1 O PHE B 194 N TYR B 162 SHEET 1 D 7 THR B 262 TRP B 265 0 SHEET 2 D 7 HIS B 239 ASP B 244 1 N ALA B 242 O THR B 262 SHEET 3 D 7 VAL B 215 VAL B 218 1 N ALA B 216 O VAL B 241 SHEET 4 D 7 ILE B 291 ASN B 294 1 O VAL B 293 N ILE B 217 SHEET 5 D 7 ARG B 341 LEU B 345 1 O ILE B 343 N ASN B 294 SHEET 6 D 7 THR B 384 ALA B 389 1 O VAL B 388 N GLY B 344 SHEET 7 D 7 VAL B 443 ARG B 445 1 O ILE B 444 N ALA B 389 CISPEP 1 GLY B 391 PHE B 392 0 6.78 SITE 1 AC1 6 ALA A 234 ALA A 238 VAL A 259 GLY A 260 SITE 2 AC1 6 GLU B 254 SER B 257 CRYST1 65.076 80.497 153.953 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015367 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012423 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006495 0.00000