data_3M1T # _entry.id 3M1T # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3M1T pdb_00003m1t 10.2210/pdb3m1t/pdb RCSB RCSB058000 ? ? WWPDB D_1000058000 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 394107 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3M1T _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-03-05 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of Putative phosphohydrolase (YP_929327.1) from Shewanella amazonensis SB2B at 1.62 A resolution' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3M1T _cell.length_a 69.729 _cell.length_b 69.729 _cell.length_c 124.569 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 6 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3M1T _symmetry.Int_Tables_number 152 _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative phosphohydrolase' 29865.180 1 ? ? ? ? 2 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 3 water nat water 18.015 247 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Putative signal transduction protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)HSAALLQKVDELPRLPKAIAELLDVVNNEDSTVKAVSEKLSHDPVLSARVLRLANSARFGCSREVGTIDDAVVR LG(MSE)QTLRTLVIASAVVGAVPKVEGFDLADFWGNTFEVAIICQELAKRLGTLPEEAFTCGILHSIGELLIVNGDPAV AATISAAVADGADRNL(MSE)EKELLGYDNAEIGALLAQSWKFTPHLVKGIQFQNHPKSAEPYSKLAG(MSE)LA(MSE) AKQIAADWDKIPDDERTSWLAQINILAGIKVDLGGLAEKLAK(MSE)HGQG(MSE)E(MSE)GKQLA ; _entity_poly.pdbx_seq_one_letter_code_can ;GMHSAALLQKVDELPRLPKAIAELLDVVNNEDSTVKAVSEKLSHDPVLSARVLRLANSARFGCSREVGTIDDAVVRLGMQ TLRTLVIASAVVGAVPKVEGFDLADFWGNTFEVAIICQELAKRLGTLPEEAFTCGILHSIGELLIVNGDPAVAATISAAV ADGADRNLMEKELLGYDNAEIGALLAQSWKFTPHLVKGIQFQNHPKSAEPYSKLAGMLAMAKQIAADWDKIPDDERTSWL AQINILAGIKVDLGGLAEKLAKMHGQGMEMGKQLA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 394107 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 HIS n 1 4 SER n 1 5 ALA n 1 6 ALA n 1 7 LEU n 1 8 LEU n 1 9 GLN n 1 10 LYS n 1 11 VAL n 1 12 ASP n 1 13 GLU n 1 14 LEU n 1 15 PRO n 1 16 ARG n 1 17 LEU n 1 18 PRO n 1 19 LYS n 1 20 ALA n 1 21 ILE n 1 22 ALA n 1 23 GLU n 1 24 LEU n 1 25 LEU n 1 26 ASP n 1 27 VAL n 1 28 VAL n 1 29 ASN n 1 30 ASN n 1 31 GLU n 1 32 ASP n 1 33 SER n 1 34 THR n 1 35 VAL n 1 36 LYS n 1 37 ALA n 1 38 VAL n 1 39 SER n 1 40 GLU n 1 41 LYS n 1 42 LEU n 1 43 SER n 1 44 HIS n 1 45 ASP n 1 46 PRO n 1 47 VAL n 1 48 LEU n 1 49 SER n 1 50 ALA n 1 51 ARG n 1 52 VAL n 1 53 LEU n 1 54 ARG n 1 55 LEU n 1 56 ALA n 1 57 ASN n 1 58 SER n 1 59 ALA n 1 60 ARG n 1 61 PHE n 1 62 GLY n 1 63 CYS n 1 64 SER n 1 65 ARG n 1 66 GLU n 1 67 VAL n 1 68 GLY n 1 69 THR n 1 70 ILE n 1 71 ASP n 1 72 ASP n 1 73 ALA n 1 74 VAL n 1 75 VAL n 1 76 ARG n 1 77 LEU n 1 78 GLY n 1 79 MSE n 1 80 GLN n 1 81 THR n 1 82 LEU n 1 83 ARG n 1 84 THR n 1 85 LEU n 1 86 VAL n 1 87 ILE n 1 88 ALA n 1 89 SER n 1 90 ALA n 1 91 VAL n 1 92 VAL n 1 93 GLY n 1 94 ALA n 1 95 VAL n 1 96 PRO n 1 97 LYS n 1 98 VAL n 1 99 GLU n 1 100 GLY n 1 101 PHE n 1 102 ASP n 1 103 LEU n 1 104 ALA n 1 105 ASP n 1 106 PHE n 1 107 TRP n 1 108 GLY n 1 109 ASN n 1 110 THR n 1 111 PHE n 1 112 GLU n 1 113 VAL n 1 114 ALA n 1 115 ILE n 1 116 ILE n 1 117 CYS n 1 118 GLN n 1 119 GLU n 1 120 LEU n 1 121 ALA n 1 122 LYS n 1 123 ARG n 1 124 LEU n 1 125 GLY n 1 126 THR n 1 127 LEU n 1 128 PRO n 1 129 GLU n 1 130 GLU n 1 131 ALA n 1 132 PHE n 1 133 THR n 1 134 CYS n 1 135 GLY n 1 136 ILE n 1 137 LEU n 1 138 HIS n 1 139 SER n 1 140 ILE n 1 141 GLY n 1 142 GLU n 1 143 LEU n 1 144 LEU n 1 145 ILE n 1 146 VAL n 1 147 ASN n 1 148 GLY n 1 149 ASP n 1 150 PRO n 1 151 ALA n 1 152 VAL n 1 153 ALA n 1 154 ALA n 1 155 THR n 1 156 ILE n 1 157 SER n 1 158 ALA n 1 159 ALA n 1 160 VAL n 1 161 ALA n 1 162 ASP n 1 163 GLY n 1 164 ALA n 1 165 ASP n 1 166 ARG n 1 167 ASN n 1 168 LEU n 1 169 MSE n 1 170 GLU n 1 171 LYS n 1 172 GLU n 1 173 LEU n 1 174 LEU n 1 175 GLY n 1 176 TYR n 1 177 ASP n 1 178 ASN n 1 179 ALA n 1 180 GLU n 1 181 ILE n 1 182 GLY n 1 183 ALA n 1 184 LEU n 1 185 LEU n 1 186 ALA n 1 187 GLN n 1 188 SER n 1 189 TRP n 1 190 LYS n 1 191 PHE n 1 192 THR n 1 193 PRO n 1 194 HIS n 1 195 LEU n 1 196 VAL n 1 197 LYS n 1 198 GLY n 1 199 ILE n 1 200 GLN n 1 201 PHE n 1 202 GLN n 1 203 ASN n 1 204 HIS n 1 205 PRO n 1 206 LYS n 1 207 SER n 1 208 ALA n 1 209 GLU n 1 210 PRO n 1 211 TYR n 1 212 SER n 1 213 LYS n 1 214 LEU n 1 215 ALA n 1 216 GLY n 1 217 MSE n 1 218 LEU n 1 219 ALA n 1 220 MSE n 1 221 ALA n 1 222 LYS n 1 223 GLN n 1 224 ILE n 1 225 ALA n 1 226 ALA n 1 227 ASP n 1 228 TRP n 1 229 ASP n 1 230 LYS n 1 231 ILE n 1 232 PRO n 1 233 ASP n 1 234 ASP n 1 235 GLU n 1 236 ARG n 1 237 THR n 1 238 SER n 1 239 TRP n 1 240 LEU n 1 241 ALA n 1 242 GLN n 1 243 ILE n 1 244 ASN n 1 245 ILE n 1 246 LEU n 1 247 ALA n 1 248 GLY n 1 249 ILE n 1 250 LYS n 1 251 VAL n 1 252 ASP n 1 253 LEU n 1 254 GLY n 1 255 GLY n 1 256 LEU n 1 257 ALA n 1 258 GLU n 1 259 LYS n 1 260 LEU n 1 261 ALA n 1 262 LYS n 1 263 MSE n 1 264 HIS n 1 265 GLY n 1 266 GLN n 1 267 GLY n 1 268 MSE n 1 269 GLU n 1 270 MSE n 1 271 GLY n 1 272 LYS n 1 273 GLN n 1 274 LEU n 1 275 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Sama_3455 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC BAA-1098 / SB2B' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Shewanella amazonensis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 326297 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A1SBA1_SHEAM _struct_ref.pdbx_db_accession A1SBA1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MHSAALLQKVDELPRLPKAIAELLDVVNNEDSTVKAVSEKLSHDPVLSARVLRLANSARFGCSREVGTIDDAVVRLGMQT LRTLVIASAVVGAVPKVEGFDLADFWGNTFEVAIICQELAKRLGTLPEEAFTCGILHSIGELLIVNGDPAVAATISAAVA DGADRNLMEKELLGYDNAEIGALLAQSWKFTPHLVKGIQFQNHPKSAEPYSKLAGMLAMAKQIAADWDKIPDDERTSWLA QINILAGIKVDLGGLAEKLAKMHGQGMEMGKQLA ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3M1T _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 275 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A1SBA1 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 274 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 274 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3M1T _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code A1SBA1 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3M1T # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.93 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 57.98 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 9.0 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '1.6000M (NH4)2SO4, 0.1M Bicine pH 9.0, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat collimating mirror, toroid focusing mirror' _diffrn_detector.pdbx_collection_date 2009-05-13 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91162 1.0 2 0.97936 1.0 3 0.97925 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL9-2 _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_wavelength_list 0.91162,0.97936,0.97925 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3M1T _reflns.d_resolution_high 1.62 _reflns.d_resolution_low 29.348 _reflns.number_obs 45318 _reflns.pdbx_Rmerge_I_obs 0.075 _reflns.pdbx_netI_over_sigmaI 19.800 _reflns.pdbx_Rsym_value 0.075 _reflns.pdbx_redundancy 9.600 _reflns.percent_possible_obs 100.000 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.62 1.66 ? 23949 ? 0.684 2.2 0.684 ? 7.40 ? 3245 99.60 1 1 1.66 1.71 ? 23767 ? 0.535 2.9 0.535 ? 7.40 ? 3219 100.00 2 1 1.71 1.76 ? 23246 ? 0.421 3.7 0.421 ? 7.40 ? 3145 100.00 3 1 1.76 1.81 ? 22491 ? 0.330 4.8 0.330 ? 7.40 ? 3033 100.00 4 1 1.81 1.87 ? 21906 ? 0.264 6.2 0.264 ? 7.40 ? 2958 100.00 5 1 1.87 1.94 ? 21462 ? 0.210 8.1 0.210 ? 7.40 ? 2885 100.00 6 1 1.94 2.01 ? 20440 ? 0.173 10.3 0.173 ? 7.40 ? 2760 100.00 7 1 2.01 2.09 ? 19845 ? 0.136 14.0 0.136 ? 7.40 ? 2677 100.00 8 1 2.09 2.18 ? 18911 ? 0.110 18.9 0.110 ? 7.40 ? 2551 100.00 9 1 2.18 2.29 ? 18148 ? 0.096 21.5 0.096 ? 7.40 ? 2447 100.00 10 1 2.29 2.41 ? 25273 ? 0.114 24.9 0.114 ? 10.70 ? 2370 100.00 11 1 2.41 2.56 ? 27025 ? 0.108 28.1 0.108 ? 12.10 ? 2228 100.00 12 1 2.56 2.74 ? 29895 ? 0.101 33.1 0.101 ? 14.40 ? 2073 100.00 13 1 2.74 2.96 ? 28643 ? 0.090 37.4 0.090 ? 14.60 ? 1962 100.00 14 1 2.96 3.24 ? 26174 ? 0.075 44.1 0.075 ? 14.50 ? 1803 100.00 15 1 3.24 3.62 ? 23812 ? 0.066 49.0 0.066 ? 14.50 ? 1645 100.00 16 1 3.62 4.18 ? 21118 ? 0.059 52.7 0.059 ? 14.30 ? 1476 100.00 17 1 4.18 5.12 ? 17659 ? 0.060 52.1 0.060 ? 14.00 ? 1259 100.00 18 1 5.12 7.24 ? 13622 ? 0.061 49.9 0.061 ? 13.80 ? 990 100.00 19 1 7.24 29.36 ? 7203 ? 0.052 50.1 0.052 ? 12.20 ? 592 98.50 20 1 # _refine.entry_id 3M1T _refine.ls_d_res_high 1.620 _refine.ls_d_res_low 29.348 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.950 _refine.ls_number_reflns_obs 45270 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : RESIDUAL ONLY OTHER REFINEMENT REMARKS: 1.HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2.ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. 3.A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4.GLYCEROL MOLECULE USED AS CRYOPROTECTANT IS MODELED IN THE STRUCTURE. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.183 _refine.ls_R_factor_R_work 0.182 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.201 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 2280 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 16.983 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.210 _refine.aniso_B[2][2] 0.210 _refine.aniso_B[3][3] -0.320 _refine.aniso_B[1][2] 0.110 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.963 _refine.correlation_coeff_Fo_to_Fc_free 0.958 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.082 _refine.pdbx_overall_ESU_R_Free 0.079 _refine.overall_SU_ML 0.053 _refine.overall_SU_B 3.386 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 51.09 _refine.B_iso_min 2.00 _refine.occupancy_max 1.00 _refine.occupancy_min 0.20 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1990 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 247 _refine_hist.number_atoms_total 2243 _refine_hist.d_res_high 1.620 _refine_hist.d_res_low 29.348 # loop_ _refine_ls_restr.type _refine_ls_restr.pdbx_refine_id _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 'X-RAY DIFFRACTION' 2276 0.018 0.022 ? ? r_bond_other_d 'X-RAY DIFFRACTION' 1476 0.001 0.020 ? ? r_angle_refined_deg 'X-RAY DIFFRACTION' 3124 1.567 1.973 ? ? r_angle_other_deg 'X-RAY DIFFRACTION' 3664 1.005 3.000 ? ? r_dihedral_angle_1_deg 'X-RAY DIFFRACTION' 318 4.753 5.000 ? ? r_dihedral_angle_2_deg 'X-RAY DIFFRACTION' 88 39.126 25.682 ? ? r_dihedral_angle_3_deg 'X-RAY DIFFRACTION' 390 14.961 15.000 ? ? r_dihedral_angle_4_deg 'X-RAY DIFFRACTION' 9 20.930 15.000 ? ? r_chiral_restr 'X-RAY DIFFRACTION' 363 0.100 0.200 ? ? r_gen_planes_refined 'X-RAY DIFFRACTION' 2670 0.007 0.021 ? ? r_gen_planes_other 'X-RAY DIFFRACTION' 419 0.002 0.020 ? ? r_mcbond_it 'X-RAY DIFFRACTION' 1492 0.935 1.500 ? ? r_mcbond_other 'X-RAY DIFFRACTION' 602 0.279 1.500 ? ? r_mcangle_it 'X-RAY DIFFRACTION' 2416 1.601 2.000 ? ? r_scbond_it 'X-RAY DIFFRACTION' 784 2.764 3.000 ? ? r_scangle_it 'X-RAY DIFFRACTION' 708 4.146 4.500 ? ? # _refine_ls_shell.d_res_high 1.620 _refine_ls_shell.d_res_low 1.662 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.730 _refine_ls_shell.number_reflns_R_work 3145 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.251 _refine_ls_shell.R_factor_R_free 0.281 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 156 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 3301 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3M1T _struct.title 'Crystal structure of Putative phosphohydrolase (YP_929327.1) from Shewanella amazonensis SB2B at 1.62 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;Putative phosphohydrolase, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, HYDROLASE ; _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.entry_id 3M1T # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details 'ANALYTICAL SIZE EXCLUSION CHROMATOGRAPHY SUPPORTS THE ASSIGNMENT OF A MONOMER AS A SIGNIFICANT OLIGOMERIZATION STATE IN SOLUTION.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 4 ? GLN A 9 ? SER A 3 GLN A 8 1 ? 6 HELX_P HELX_P2 2 LYS A 10 ? LEU A 14 ? LYS A 9 LEU A 13 5 ? 5 HELX_P HELX_P3 3 PRO A 18 ? ASN A 30 ? PRO A 17 ASN A 29 1 ? 13 HELX_P HELX_P4 4 THR A 34 ? HIS A 44 ? THR A 33 HIS A 43 1 ? 11 HELX_P HELX_P5 5 ASP A 45 ? ASN A 57 ? ASP A 44 ASN A 56 1 ? 13 HELX_P HELX_P6 6 THR A 69 ? GLY A 78 ? THR A 68 GLY A 77 1 ? 10 HELX_P HELX_P7 7 GLY A 78 ? VAL A 95 ? GLY A 77 VAL A 94 1 ? 18 HELX_P HELX_P8 8 ASP A 102 ? GLY A 125 ? ASP A 101 GLY A 124 1 ? 24 HELX_P HELX_P9 9 LEU A 127 ? HIS A 138 ? LEU A 126 HIS A 137 1 ? 12 HELX_P HELX_P10 10 SER A 139 ? ASP A 149 ? SER A 138 ASP A 148 1 ? 11 HELX_P HELX_P11 11 ASP A 149 ? ASP A 162 ? ASP A 148 ASP A 161 1 ? 14 HELX_P HELX_P12 12 ASP A 165 ? GLY A 175 ? ASP A 164 GLY A 174 1 ? 11 HELX_P HELX_P13 13 ASP A 177 ? TRP A 189 ? ASP A 176 TRP A 188 1 ? 13 HELX_P HELX_P14 14 THR A 192 ? PHE A 201 ? THR A 191 PHE A 200 1 ? 10 HELX_P HELX_P15 15 HIS A 204 ? ALA A 208 ? HIS A 203 ALA A 207 5 ? 5 HELX_P HELX_P16 16 SER A 212 ? TRP A 228 ? SER A 211 TRP A 227 1 ? 17 HELX_P HELX_P17 17 ASP A 229 ? ILE A 231 ? ASP A 228 ILE A 230 5 ? 3 HELX_P HELX_P18 18 GLU A 235 ? GLY A 248 ? GLU A 234 GLY A 247 1 ? 14 HELX_P HELX_P19 19 GLY A 255 ? HIS A 264 ? GLY A 254 HIS A 263 1 ? 10 HELX_P HELX_P20 20 GLY A 265 ? GLN A 273 ? GLY A 264 GLN A 272 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLY 1 C ? ? ? 1_555 A MSE 2 N A ? A GLY 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.346 ? ? covale2 covale both ? A GLY 1 C ? ? ? 1_555 A MSE 2 N B ? A GLY 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale3 covale both ? A MSE 2 C A ? ? 1_555 A HIS 3 N ? ? A MSE 1 A HIS 2 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale4 covale both ? A MSE 2 C B ? ? 1_555 A HIS 3 N ? ? A MSE 1 A HIS 2 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale5 covale both ? A GLY 78 C ? ? ? 1_555 A MSE 79 N ? ? A GLY 77 A MSE 78 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale6 covale both ? A MSE 79 C ? ? ? 1_555 A GLN 80 N ? ? A MSE 78 A GLN 79 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale7 covale both ? A LEU 168 C ? ? ? 1_555 A MSE 169 N ? ? A LEU 167 A MSE 168 1_555 ? ? ? ? ? ? ? 1.349 ? ? covale8 covale both ? A MSE 169 C ? ? ? 1_555 A GLU 170 N ? ? A MSE 168 A GLU 169 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale9 covale both ? A GLY 216 C ? ? ? 1_555 A MSE 217 N ? ? A GLY 215 A MSE 216 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale10 covale both ? A MSE 217 C ? ? ? 1_555 A LEU 218 N ? ? A MSE 216 A LEU 217 1_555 ? ? ? ? ? ? ? 1.351 ? ? covale11 covale both ? A ALA 219 C ? ? ? 1_555 A MSE 220 N ? ? A ALA 218 A MSE 219 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale12 covale both ? A MSE 220 C ? ? ? 1_555 A ALA 221 N ? ? A MSE 219 A ALA 220 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale13 covale both ? A LYS 262 C ? ? ? 1_555 A MSE 263 N ? ? A LYS 261 A MSE 262 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale14 covale both ? A MSE 263 C ? ? ? 1_555 A HIS 264 N ? ? A MSE 262 A HIS 263 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale15 covale both ? A GLY 267 C ? ? ? 1_555 A MSE 268 N ? ? A GLY 266 A MSE 267 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale16 covale both ? A MSE 268 C ? ? ? 1_555 A GLU 269 N A ? A MSE 267 A GLU 268 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale17 covale both ? A MSE 268 C ? ? ? 1_555 A GLU 269 N B ? A MSE 267 A GLU 268 1_555 ? ? ? ? ? ? ? 1.344 ? ? covale18 covale both ? A GLU 269 C A ? ? 1_555 A MSE 270 N ? ? A GLU 268 A MSE 269 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale19 covale both ? A GLU 269 C B ? ? 1_555 A MSE 270 N ? ? A GLU 268 A MSE 269 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale20 covale both ? A MSE 270 C ? ? ? 1_555 A GLY 271 N ? ? A MSE 269 A GLY 270 1_555 ? ? ? ? ? ? ? 1.331 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLU _struct_mon_prot_cis.label_seq_id 209 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLU _struct_mon_prot_cis.auth_seq_id 208 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 210 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 209 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -7.51 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id GOL _struct_site.pdbx_auth_seq_id 275 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 8 _struct_site.details 'BINDING SITE FOR RESIDUE GOL A 275' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 LEU A 168 ? LEU A 167 . ? 1_555 ? 2 AC1 8 GLU A 172 ? GLU A 171 . ? 1_555 ? 3 AC1 8 ASP A 233 ? ASP A 232 . ? 6_655 ? 4 AC1 8 ASP A 234 ? ASP A 233 . ? 6_655 ? 5 AC1 8 GLU A 235 ? GLU A 234 . ? 6_655 ? 6 AC1 8 ARG A 236 ? ARG A 235 . ? 6_655 ? 7 AC1 8 HOH C . ? HOH A 276 . ? 6_655 ? 8 AC1 8 HOH C . ? HOH A 295 . ? 1_555 ? # _atom_sites.entry_id 3M1T _atom_sites.fract_transf_matrix[1][1] 0.014341 _atom_sites.fract_transf_matrix[1][2] 0.008280 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016560 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008028 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 0 GLY GLY A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 HIS 3 2 2 HIS HIS A . n A 1 4 SER 4 3 3 SER SER A . n A 1 5 ALA 5 4 4 ALA ALA A . n A 1 6 ALA 6 5 5 ALA ALA A . n A 1 7 LEU 7 6 6 LEU LEU A . n A 1 8 LEU 8 7 7 LEU LEU A . n A 1 9 GLN 9 8 8 GLN GLN A . n A 1 10 LYS 10 9 9 LYS LYS A . n A 1 11 VAL 11 10 10 VAL VAL A . n A 1 12 ASP 12 11 11 ASP ASP A . n A 1 13 GLU 13 12 12 GLU GLU A . n A 1 14 LEU 14 13 13 LEU LEU A . n A 1 15 PRO 15 14 14 PRO PRO A . n A 1 16 ARG 16 15 15 ARG ARG A . n A 1 17 LEU 17 16 16 LEU LEU A . n A 1 18 PRO 18 17 17 PRO PRO A . n A 1 19 LYS 19 18 18 LYS LYS A . n A 1 20 ALA 20 19 19 ALA ALA A . n A 1 21 ILE 21 20 20 ILE ILE A . n A 1 22 ALA 22 21 21 ALA ALA A . n A 1 23 GLU 23 22 22 GLU GLU A . n A 1 24 LEU 24 23 23 LEU LEU A . n A 1 25 LEU 25 24 24 LEU LEU A . n A 1 26 ASP 26 25 25 ASP ASP A . n A 1 27 VAL 27 26 26 VAL VAL A . n A 1 28 VAL 28 27 27 VAL VAL A . n A 1 29 ASN 29 28 28 ASN ASN A . n A 1 30 ASN 30 29 29 ASN ASN A . n A 1 31 GLU 31 30 30 GLU GLU A . n A 1 32 ASP 32 31 31 ASP ASP A . n A 1 33 SER 33 32 32 SER SER A . n A 1 34 THR 34 33 33 THR THR A . n A 1 35 VAL 35 34 34 VAL VAL A . n A 1 36 LYS 36 35 35 LYS LYS A . n A 1 37 ALA 37 36 36 ALA ALA A . n A 1 38 VAL 38 37 37 VAL VAL A . n A 1 39 SER 39 38 38 SER SER A . n A 1 40 GLU 40 39 39 GLU GLU A . n A 1 41 LYS 41 40 40 LYS LYS A . n A 1 42 LEU 42 41 41 LEU LEU A . n A 1 43 SER 43 42 42 SER SER A . n A 1 44 HIS 44 43 43 HIS HIS A . n A 1 45 ASP 45 44 44 ASP ASP A . n A 1 46 PRO 46 45 45 PRO PRO A . n A 1 47 VAL 47 46 46 VAL VAL A . n A 1 48 LEU 48 47 47 LEU LEU A . n A 1 49 SER 49 48 48 SER SER A . n A 1 50 ALA 50 49 49 ALA ALA A . n A 1 51 ARG 51 50 50 ARG ARG A . n A 1 52 VAL 52 51 51 VAL VAL A . n A 1 53 LEU 53 52 52 LEU LEU A . n A 1 54 ARG 54 53 53 ARG ARG A . n A 1 55 LEU 55 54 54 LEU LEU A . n A 1 56 ALA 56 55 55 ALA ALA A . n A 1 57 ASN 57 56 56 ASN ASN A . n A 1 58 SER 58 57 57 SER SER A . n A 1 59 ALA 59 58 58 ALA ALA A . n A 1 60 ARG 60 59 ? ? ? A . n A 1 61 PHE 61 60 ? ? ? A . n A 1 62 GLY 62 61 ? ? ? A . n A 1 63 CYS 63 62 ? ? ? A . n A 1 64 SER 64 63 ? ? ? A . n A 1 65 ARG 65 64 ? ? ? A . n A 1 66 GLU 66 65 65 GLU GLU A . n A 1 67 VAL 67 66 66 VAL VAL A . n A 1 68 GLY 68 67 67 GLY GLY A . n A 1 69 THR 69 68 68 THR THR A . n A 1 70 ILE 70 69 69 ILE ILE A . n A 1 71 ASP 71 70 70 ASP ASP A . n A 1 72 ASP 72 71 71 ASP ASP A . n A 1 73 ALA 73 72 72 ALA ALA A . n A 1 74 VAL 74 73 73 VAL VAL A . n A 1 75 VAL 75 74 74 VAL VAL A . n A 1 76 ARG 76 75 75 ARG ARG A . n A 1 77 LEU 77 76 76 LEU LEU A . n A 1 78 GLY 78 77 77 GLY GLY A . n A 1 79 MSE 79 78 78 MSE MSE A . n A 1 80 GLN 80 79 79 GLN GLN A . n A 1 81 THR 81 80 80 THR THR A . n A 1 82 LEU 82 81 81 LEU LEU A . n A 1 83 ARG 83 82 82 ARG ARG A . n A 1 84 THR 84 83 83 THR THR A . n A 1 85 LEU 85 84 84 LEU LEU A . n A 1 86 VAL 86 85 85 VAL VAL A . n A 1 87 ILE 87 86 86 ILE ILE A . n A 1 88 ALA 88 87 87 ALA ALA A . n A 1 89 SER 89 88 88 SER SER A . n A 1 90 ALA 90 89 89 ALA ALA A . n A 1 91 VAL 91 90 90 VAL VAL A . n A 1 92 VAL 92 91 91 VAL VAL A . n A 1 93 GLY 93 92 92 GLY GLY A . n A 1 94 ALA 94 93 93 ALA ALA A . n A 1 95 VAL 95 94 94 VAL VAL A . n A 1 96 PRO 96 95 95 PRO PRO A . n A 1 97 LYS 97 96 96 LYS LYS A . n A 1 98 VAL 98 97 97 VAL VAL A . n A 1 99 GLU 99 98 98 GLU GLU A . n A 1 100 GLY 100 99 99 GLY GLY A . n A 1 101 PHE 101 100 100 PHE PHE A . n A 1 102 ASP 102 101 101 ASP ASP A . n A 1 103 LEU 103 102 102 LEU LEU A . n A 1 104 ALA 104 103 103 ALA ALA A . n A 1 105 ASP 105 104 104 ASP ASP A . n A 1 106 PHE 106 105 105 PHE PHE A . n A 1 107 TRP 107 106 106 TRP TRP A . n A 1 108 GLY 108 107 107 GLY GLY A . n A 1 109 ASN 109 108 108 ASN ASN A . n A 1 110 THR 110 109 109 THR THR A . n A 1 111 PHE 111 110 110 PHE PHE A . n A 1 112 GLU 112 111 111 GLU GLU A . n A 1 113 VAL 113 112 112 VAL VAL A . n A 1 114 ALA 114 113 113 ALA ALA A . n A 1 115 ILE 115 114 114 ILE ILE A . n A 1 116 ILE 116 115 115 ILE ILE A . n A 1 117 CYS 117 116 116 CYS CYS A . n A 1 118 GLN 118 117 117 GLN GLN A . n A 1 119 GLU 119 118 118 GLU GLU A . n A 1 120 LEU 120 119 119 LEU LEU A . n A 1 121 ALA 121 120 120 ALA ALA A . n A 1 122 LYS 122 121 121 LYS LYS A . n A 1 123 ARG 123 122 122 ARG ARG A . n A 1 124 LEU 124 123 123 LEU LEU A . n A 1 125 GLY 125 124 124 GLY GLY A . n A 1 126 THR 126 125 125 THR THR A . n A 1 127 LEU 127 126 126 LEU LEU A . n A 1 128 PRO 128 127 127 PRO PRO A . n A 1 129 GLU 129 128 128 GLU GLU A . n A 1 130 GLU 130 129 129 GLU GLU A . n A 1 131 ALA 131 130 130 ALA ALA A . n A 1 132 PHE 132 131 131 PHE PHE A . n A 1 133 THR 133 132 132 THR THR A . n A 1 134 CYS 134 133 133 CYS CYS A . n A 1 135 GLY 135 134 134 GLY GLY A . n A 1 136 ILE 136 135 135 ILE ILE A . n A 1 137 LEU 137 136 136 LEU LEU A . n A 1 138 HIS 138 137 137 HIS HIS A . n A 1 139 SER 139 138 138 SER SER A . n A 1 140 ILE 140 139 139 ILE ILE A . n A 1 141 GLY 141 140 140 GLY GLY A . n A 1 142 GLU 142 141 141 GLU GLU A . n A 1 143 LEU 143 142 142 LEU LEU A . n A 1 144 LEU 144 143 143 LEU LEU A . n A 1 145 ILE 145 144 144 ILE ILE A . n A 1 146 VAL 146 145 145 VAL VAL A . n A 1 147 ASN 147 146 146 ASN ASN A . n A 1 148 GLY 148 147 147 GLY GLY A . n A 1 149 ASP 149 148 148 ASP ASP A . n A 1 150 PRO 150 149 149 PRO PRO A . n A 1 151 ALA 151 150 150 ALA ALA A . n A 1 152 VAL 152 151 151 VAL VAL A . n A 1 153 ALA 153 152 152 ALA ALA A . n A 1 154 ALA 154 153 153 ALA ALA A . n A 1 155 THR 155 154 154 THR THR A . n A 1 156 ILE 156 155 155 ILE ILE A . n A 1 157 SER 157 156 156 SER SER A . n A 1 158 ALA 158 157 157 ALA ALA A . n A 1 159 ALA 159 158 158 ALA ALA A . n A 1 160 VAL 160 159 159 VAL VAL A . n A 1 161 ALA 161 160 160 ALA ALA A . n A 1 162 ASP 162 161 161 ASP ASP A . n A 1 163 GLY 163 162 162 GLY GLY A . n A 1 164 ALA 164 163 163 ALA ALA A . n A 1 165 ASP 165 164 164 ASP ASP A . n A 1 166 ARG 166 165 165 ARG ARG A . n A 1 167 ASN 167 166 166 ASN ASN A . n A 1 168 LEU 168 167 167 LEU LEU A . n A 1 169 MSE 169 168 168 MSE MSE A . n A 1 170 GLU 170 169 169 GLU GLU A . n A 1 171 LYS 171 170 170 LYS LYS A . n A 1 172 GLU 172 171 171 GLU GLU A . n A 1 173 LEU 173 172 172 LEU LEU A . n A 1 174 LEU 174 173 173 LEU LEU A . n A 1 175 GLY 175 174 174 GLY GLY A . n A 1 176 TYR 176 175 175 TYR TYR A . n A 1 177 ASP 177 176 176 ASP ASP A . n A 1 178 ASN 178 177 177 ASN ASN A . n A 1 179 ALA 179 178 178 ALA ALA A . n A 1 180 GLU 180 179 179 GLU GLU A . n A 1 181 ILE 181 180 180 ILE ILE A . n A 1 182 GLY 182 181 181 GLY GLY A . n A 1 183 ALA 183 182 182 ALA ALA A . n A 1 184 LEU 184 183 183 LEU LEU A . n A 1 185 LEU 185 184 184 LEU LEU A . n A 1 186 ALA 186 185 185 ALA ALA A . n A 1 187 GLN 187 186 186 GLN GLN A . n A 1 188 SER 188 187 187 SER SER A . n A 1 189 TRP 189 188 188 TRP TRP A . n A 1 190 LYS 190 189 189 LYS LYS A . n A 1 191 PHE 191 190 190 PHE PHE A . n A 1 192 THR 192 191 191 THR THR A . n A 1 193 PRO 193 192 192 PRO PRO A . n A 1 194 HIS 194 193 193 HIS HIS A . n A 1 195 LEU 195 194 194 LEU LEU A . n A 1 196 VAL 196 195 195 VAL VAL A . n A 1 197 LYS 197 196 196 LYS LYS A . n A 1 198 GLY 198 197 197 GLY GLY A . n A 1 199 ILE 199 198 198 ILE ILE A . n A 1 200 GLN 200 199 199 GLN GLN A . n A 1 201 PHE 201 200 200 PHE PHE A . n A 1 202 GLN 202 201 201 GLN GLN A . n A 1 203 ASN 203 202 202 ASN ASN A . n A 1 204 HIS 204 203 203 HIS HIS A . n A 1 205 PRO 205 204 204 PRO PRO A . n A 1 206 LYS 206 205 205 LYS LYS A . n A 1 207 SER 207 206 206 SER SER A . n A 1 208 ALA 208 207 207 ALA ALA A . n A 1 209 GLU 209 208 208 GLU GLU A . n A 1 210 PRO 210 209 209 PRO PRO A . n A 1 211 TYR 211 210 210 TYR TYR A . n A 1 212 SER 212 211 211 SER SER A . n A 1 213 LYS 213 212 212 LYS LYS A . n A 1 214 LEU 214 213 213 LEU LEU A . n A 1 215 ALA 215 214 214 ALA ALA A . n A 1 216 GLY 216 215 215 GLY GLY A . n A 1 217 MSE 217 216 216 MSE MSE A . n A 1 218 LEU 218 217 217 LEU LEU A . n A 1 219 ALA 219 218 218 ALA ALA A . n A 1 220 MSE 220 219 219 MSE MSE A . n A 1 221 ALA 221 220 220 ALA ALA A . n A 1 222 LYS 222 221 221 LYS LYS A . n A 1 223 GLN 223 222 222 GLN GLN A . n A 1 224 ILE 224 223 223 ILE ILE A . n A 1 225 ALA 225 224 224 ALA ALA A . n A 1 226 ALA 226 225 225 ALA ALA A . n A 1 227 ASP 227 226 226 ASP ASP A . n A 1 228 TRP 228 227 227 TRP TRP A . n A 1 229 ASP 229 228 228 ASP ASP A . n A 1 230 LYS 230 229 229 LYS LYS A . n A 1 231 ILE 231 230 230 ILE ILE A . n A 1 232 PRO 232 231 231 PRO PRO A . n A 1 233 ASP 233 232 232 ASP ASP A . n A 1 234 ASP 234 233 233 ASP ASP A . n A 1 235 GLU 235 234 234 GLU GLU A . n A 1 236 ARG 236 235 235 ARG ARG A . n A 1 237 THR 237 236 236 THR THR A . n A 1 238 SER 238 237 237 SER SER A . n A 1 239 TRP 239 238 238 TRP TRP A . n A 1 240 LEU 240 239 239 LEU LEU A . n A 1 241 ALA 241 240 240 ALA ALA A . n A 1 242 GLN 242 241 241 GLN GLN A . n A 1 243 ILE 243 242 242 ILE ILE A . n A 1 244 ASN 244 243 243 ASN ASN A . n A 1 245 ILE 245 244 244 ILE ILE A . n A 1 246 LEU 246 245 245 LEU LEU A . n A 1 247 ALA 247 246 246 ALA ALA A . n A 1 248 GLY 248 247 247 GLY GLY A . n A 1 249 ILE 249 248 248 ILE ILE A . n A 1 250 LYS 250 249 249 LYS LYS A . n A 1 251 VAL 251 250 250 VAL VAL A . n A 1 252 ASP 252 251 251 ASP ASP A . n A 1 253 LEU 253 252 252 LEU LEU A . n A 1 254 GLY 254 253 253 GLY GLY A . n A 1 255 GLY 255 254 254 GLY GLY A . n A 1 256 LEU 256 255 255 LEU LEU A . n A 1 257 ALA 257 256 256 ALA ALA A . n A 1 258 GLU 258 257 257 GLU GLU A . n A 1 259 LYS 259 258 258 LYS LYS A . n A 1 260 LEU 260 259 259 LEU LEU A . n A 1 261 ALA 261 260 260 ALA ALA A . n A 1 262 LYS 262 261 261 LYS LYS A . n A 1 263 MSE 263 262 262 MSE MSE A . n A 1 264 HIS 264 263 263 HIS HIS A . n A 1 265 GLY 265 264 264 GLY GLY A . n A 1 266 GLN 266 265 265 GLN GLN A . n A 1 267 GLY 267 266 266 GLY GLY A . n A 1 268 MSE 268 267 267 MSE MSE A . n A 1 269 GLU 269 268 268 GLU GLU A . n A 1 270 MSE 270 269 269 MSE MSE A . n A 1 271 GLY 271 270 270 GLY GLY A . n A 1 272 LYS 272 271 271 LYS LYS A . n A 1 273 GLN 273 272 272 GLN GLN A . n A 1 274 LEU 274 273 273 LEU LEU A . n A 1 275 ALA 275 274 274 ALA ALA A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL 1 275 1 GOL GOL A . C 3 HOH 1 276 2 HOH HOH A . C 3 HOH 2 277 3 HOH HOH A . C 3 HOH 3 278 4 HOH HOH A . C 3 HOH 4 279 5 HOH HOH A . C 3 HOH 5 280 6 HOH HOH A . C 3 HOH 6 281 7 HOH HOH A . C 3 HOH 7 282 8 HOH HOH A . C 3 HOH 8 283 9 HOH HOH A . C 3 HOH 9 284 10 HOH HOH A . C 3 HOH 10 285 11 HOH HOH A . C 3 HOH 11 286 12 HOH HOH A . C 3 HOH 12 287 13 HOH HOH A . C 3 HOH 13 288 14 HOH HOH A . C 3 HOH 14 289 15 HOH HOH A . C 3 HOH 15 290 16 HOH HOH A . C 3 HOH 16 291 17 HOH HOH A . C 3 HOH 17 292 18 HOH HOH A . C 3 HOH 18 293 19 HOH HOH A . C 3 HOH 19 294 20 HOH HOH A . C 3 HOH 20 295 21 HOH HOH A . C 3 HOH 21 296 22 HOH HOH A . C 3 HOH 22 297 23 HOH HOH A . C 3 HOH 23 298 24 HOH HOH A . C 3 HOH 24 299 25 HOH HOH A . C 3 HOH 25 300 26 HOH HOH A . C 3 HOH 26 301 27 HOH HOH A . C 3 HOH 27 302 28 HOH HOH A . C 3 HOH 28 303 29 HOH HOH A . C 3 HOH 29 304 30 HOH HOH A . C 3 HOH 30 305 31 HOH HOH A . C 3 HOH 31 306 32 HOH HOH A . C 3 HOH 32 307 33 HOH HOH A . C 3 HOH 33 308 34 HOH HOH A . C 3 HOH 34 309 35 HOH HOH A . C 3 HOH 35 310 36 HOH HOH A . C 3 HOH 36 311 37 HOH HOH A . C 3 HOH 37 312 38 HOH HOH A . C 3 HOH 38 313 39 HOH HOH A . C 3 HOH 39 314 40 HOH HOH A . C 3 HOH 40 315 41 HOH HOH A . C 3 HOH 41 316 42 HOH HOH A . C 3 HOH 42 317 43 HOH HOH A . C 3 HOH 43 318 44 HOH HOH A . C 3 HOH 44 319 45 HOH HOH A . C 3 HOH 45 320 46 HOH HOH A . C 3 HOH 46 321 47 HOH HOH A . C 3 HOH 47 322 48 HOH HOH A . C 3 HOH 48 323 49 HOH HOH A . C 3 HOH 49 324 50 HOH HOH A . C 3 HOH 50 325 51 HOH HOH A . C 3 HOH 51 326 52 HOH HOH A . C 3 HOH 52 327 53 HOH HOH A . C 3 HOH 53 328 54 HOH HOH A . C 3 HOH 54 329 55 HOH HOH A . C 3 HOH 55 330 56 HOH HOH A . C 3 HOH 56 331 57 HOH HOH A . C 3 HOH 57 332 58 HOH HOH A . C 3 HOH 58 333 59 HOH HOH A . C 3 HOH 59 334 60 HOH HOH A . C 3 HOH 60 335 61 HOH HOH A . C 3 HOH 61 336 62 HOH HOH A . C 3 HOH 62 337 63 HOH HOH A . C 3 HOH 63 338 64 HOH HOH A . C 3 HOH 64 339 65 HOH HOH A . C 3 HOH 65 340 66 HOH HOH A . C 3 HOH 66 341 67 HOH HOH A . C 3 HOH 67 342 68 HOH HOH A . C 3 HOH 68 343 69 HOH HOH A . C 3 HOH 69 344 70 HOH HOH A . C 3 HOH 70 345 71 HOH HOH A . C 3 HOH 71 346 72 HOH HOH A . C 3 HOH 72 347 73 HOH HOH A . C 3 HOH 73 348 74 HOH HOH A . C 3 HOH 74 349 75 HOH HOH A . C 3 HOH 75 350 76 HOH HOH A . C 3 HOH 76 351 77 HOH HOH A . C 3 HOH 77 352 78 HOH HOH A . C 3 HOH 78 353 79 HOH HOH A . C 3 HOH 79 354 80 HOH HOH A . C 3 HOH 80 355 81 HOH HOH A . C 3 HOH 81 356 82 HOH HOH A . C 3 HOH 82 357 83 HOH HOH A . C 3 HOH 83 358 84 HOH HOH A . C 3 HOH 84 359 85 HOH HOH A . C 3 HOH 85 360 86 HOH HOH A . C 3 HOH 86 361 87 HOH HOH A . C 3 HOH 87 362 88 HOH HOH A . C 3 HOH 88 363 89 HOH HOH A . C 3 HOH 89 364 90 HOH HOH A . C 3 HOH 90 365 91 HOH HOH A . C 3 HOH 91 366 92 HOH HOH A . C 3 HOH 92 367 93 HOH HOH A . C 3 HOH 93 368 94 HOH HOH A . C 3 HOH 94 369 95 HOH HOH A . C 3 HOH 95 370 96 HOH HOH A . C 3 HOH 96 371 97 HOH HOH A . C 3 HOH 97 372 98 HOH HOH A . C 3 HOH 98 373 99 HOH HOH A . C 3 HOH 99 374 100 HOH HOH A . C 3 HOH 100 375 101 HOH HOH A . C 3 HOH 101 376 102 HOH HOH A . C 3 HOH 102 377 103 HOH HOH A . C 3 HOH 103 378 104 HOH HOH A . C 3 HOH 104 379 105 HOH HOH A . C 3 HOH 105 380 106 HOH HOH A . C 3 HOH 106 381 107 HOH HOH A . C 3 HOH 107 382 108 HOH HOH A . C 3 HOH 108 383 109 HOH HOH A . C 3 HOH 109 384 110 HOH HOH A . C 3 HOH 110 385 111 HOH HOH A . C 3 HOH 111 386 112 HOH HOH A . C 3 HOH 112 387 113 HOH HOH A . C 3 HOH 113 388 114 HOH HOH A . C 3 HOH 114 389 115 HOH HOH A . C 3 HOH 115 390 116 HOH HOH A . C 3 HOH 116 391 117 HOH HOH A . C 3 HOH 117 392 118 HOH HOH A . C 3 HOH 118 393 119 HOH HOH A . C 3 HOH 119 394 120 HOH HOH A . C 3 HOH 120 395 121 HOH HOH A . C 3 HOH 121 396 122 HOH HOH A . C 3 HOH 122 397 123 HOH HOH A . C 3 HOH 123 398 124 HOH HOH A . C 3 HOH 124 399 125 HOH HOH A . C 3 HOH 125 400 126 HOH HOH A . C 3 HOH 126 401 127 HOH HOH A . C 3 HOH 127 402 128 HOH HOH A . C 3 HOH 128 403 129 HOH HOH A . C 3 HOH 129 404 130 HOH HOH A . C 3 HOH 130 405 131 HOH HOH A . C 3 HOH 131 406 132 HOH HOH A . C 3 HOH 132 407 133 HOH HOH A . C 3 HOH 133 408 134 HOH HOH A . C 3 HOH 134 409 135 HOH HOH A . C 3 HOH 135 410 136 HOH HOH A . C 3 HOH 136 411 137 HOH HOH A . C 3 HOH 137 412 138 HOH HOH A . C 3 HOH 138 413 139 HOH HOH A . C 3 HOH 139 414 140 HOH HOH A . C 3 HOH 140 415 141 HOH HOH A . C 3 HOH 141 416 142 HOH HOH A . C 3 HOH 142 417 143 HOH HOH A . C 3 HOH 143 418 144 HOH HOH A . C 3 HOH 144 419 145 HOH HOH A . C 3 HOH 145 420 146 HOH HOH A . C 3 HOH 146 421 147 HOH HOH A . C 3 HOH 147 422 148 HOH HOH A . C 3 HOH 148 423 149 HOH HOH A . C 3 HOH 149 424 150 HOH HOH A . C 3 HOH 150 425 151 HOH HOH A . C 3 HOH 151 426 152 HOH HOH A . C 3 HOH 152 427 153 HOH HOH A . C 3 HOH 153 428 154 HOH HOH A . C 3 HOH 154 429 155 HOH HOH A . C 3 HOH 155 430 156 HOH HOH A . C 3 HOH 156 431 157 HOH HOH A . C 3 HOH 157 432 158 HOH HOH A . C 3 HOH 158 433 159 HOH HOH A . C 3 HOH 159 434 160 HOH HOH A . C 3 HOH 160 435 161 HOH HOH A . C 3 HOH 161 436 162 HOH HOH A . C 3 HOH 162 437 163 HOH HOH A . C 3 HOH 163 438 164 HOH HOH A . C 3 HOH 164 439 165 HOH HOH A . C 3 HOH 165 440 166 HOH HOH A . C 3 HOH 166 441 167 HOH HOH A . C 3 HOH 167 442 168 HOH HOH A . C 3 HOH 168 443 169 HOH HOH A . C 3 HOH 169 444 170 HOH HOH A . C 3 HOH 170 445 171 HOH HOH A . C 3 HOH 171 446 172 HOH HOH A . C 3 HOH 172 447 173 HOH HOH A . C 3 HOH 173 448 174 HOH HOH A . C 3 HOH 174 449 175 HOH HOH A . C 3 HOH 175 450 176 HOH HOH A . C 3 HOH 176 451 177 HOH HOH A . C 3 HOH 177 452 178 HOH HOH A . C 3 HOH 178 453 179 HOH HOH A . C 3 HOH 179 454 180 HOH HOH A . C 3 HOH 180 455 181 HOH HOH A . C 3 HOH 181 456 182 HOH HOH A . C 3 HOH 182 457 183 HOH HOH A . C 3 HOH 183 458 184 HOH HOH A . C 3 HOH 184 459 185 HOH HOH A . C 3 HOH 185 460 186 HOH HOH A . C 3 HOH 186 461 187 HOH HOH A . C 3 HOH 187 462 188 HOH HOH A . C 3 HOH 188 463 189 HOH HOH A . C 3 HOH 189 464 190 HOH HOH A . C 3 HOH 190 465 191 HOH HOH A . C 3 HOH 191 466 192 HOH HOH A . C 3 HOH 192 467 193 HOH HOH A . C 3 HOH 193 468 194 HOH HOH A . C 3 HOH 194 469 195 HOH HOH A . C 3 HOH 195 470 196 HOH HOH A . C 3 HOH 196 471 197 HOH HOH A . C 3 HOH 197 472 198 HOH HOH A . C 3 HOH 198 473 199 HOH HOH A . C 3 HOH 199 474 200 HOH HOH A . C 3 HOH 200 475 201 HOH HOH A . C 3 HOH 201 476 202 HOH HOH A . C 3 HOH 202 477 203 HOH HOH A . C 3 HOH 203 478 204 HOH HOH A . C 3 HOH 204 479 205 HOH HOH A . C 3 HOH 205 480 206 HOH HOH A . C 3 HOH 206 481 207 HOH HOH A . C 3 HOH 207 482 208 HOH HOH A . C 3 HOH 208 483 209 HOH HOH A . C 3 HOH 209 484 210 HOH HOH A . C 3 HOH 210 485 211 HOH HOH A . C 3 HOH 211 486 212 HOH HOH A . C 3 HOH 212 487 213 HOH HOH A . C 3 HOH 213 488 214 HOH HOH A . C 3 HOH 214 489 215 HOH HOH A . C 3 HOH 215 490 216 HOH HOH A . C 3 HOH 216 491 217 HOH HOH A . C 3 HOH 217 492 218 HOH HOH A . C 3 HOH 218 493 219 HOH HOH A . C 3 HOH 219 494 220 HOH HOH A . C 3 HOH 220 495 221 HOH HOH A . C 3 HOH 221 496 222 HOH HOH A . C 3 HOH 222 497 223 HOH HOH A . C 3 HOH 223 498 224 HOH HOH A . C 3 HOH 224 499 225 HOH HOH A . C 3 HOH 225 500 226 HOH HOH A . C 3 HOH 226 501 227 HOH HOH A . C 3 HOH 227 502 228 HOH HOH A . C 3 HOH 228 503 229 HOH HOH A . C 3 HOH 229 504 230 HOH HOH A . C 3 HOH 230 505 231 HOH HOH A . C 3 HOH 231 506 232 HOH HOH A . C 3 HOH 232 507 233 HOH HOH A . C 3 HOH 233 508 234 HOH HOH A . C 3 HOH 234 509 235 HOH HOH A . C 3 HOH 235 510 236 HOH HOH A . C 3 HOH 236 511 237 HOH HOH A . C 3 HOH 237 512 238 HOH HOH A . C 3 HOH 238 513 239 HOH HOH A . C 3 HOH 239 514 240 HOH HOH A . C 3 HOH 240 515 241 HOH HOH A . C 3 HOH 241 516 242 HOH HOH A . C 3 HOH 242 517 243 HOH HOH A . C 3 HOH 243 518 244 HOH HOH A . C 3 HOH 244 519 245 HOH HOH A . C 3 HOH 245 520 246 HOH HOH A . C 3 HOH 246 521 247 HOH HOH A . C 3 HOH 247 522 248 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 79 A MSE 78 ? MET SELENOMETHIONINE 3 A MSE 169 A MSE 168 ? MET SELENOMETHIONINE 4 A MSE 217 A MSE 216 ? MET SELENOMETHIONINE 5 A MSE 220 A MSE 219 ? MET SELENOMETHIONINE 6 A MSE 263 A MSE 262 ? MET SELENOMETHIONINE 7 A MSE 268 A MSE 267 ? MET SELENOMETHIONINE 8 A MSE 270 A MSE 269 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-03-31 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2019-07-17 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Author supporting evidence' 4 3 'Structure model' 'Refinement description' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' 8 5 'Structure model' 'Database references' 9 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_struct_assembly_auth_evidence 2 3 'Structure model' software 3 4 'Structure model' software 4 4 'Structure model' struct_conn 5 5 'Structure model' database_2 6 5 'Structure model' struct_ref_seq_dif 7 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 37.3784 _pdbx_refine_tls.origin_y 29.3753 _pdbx_refine_tls.origin_z 11.5761 _pdbx_refine_tls.T[1][1] 0.0465 _pdbx_refine_tls.T[2][2] 0.2006 _pdbx_refine_tls.T[3][3] 0.0854 _pdbx_refine_tls.T[1][2] -0.0621 _pdbx_refine_tls.T[1][3] 0.0012 _pdbx_refine_tls.T[2][3] 0.0029 _pdbx_refine_tls.L[1][1] 0.7369 _pdbx_refine_tls.L[2][2] 0.6419 _pdbx_refine_tls.L[3][3] 1.4229 _pdbx_refine_tls.L[1][2] 0.3229 _pdbx_refine_tls.L[1][3] -0.2997 _pdbx_refine_tls.L[2][3] 0.1206 _pdbx_refine_tls.S[1][1] -0.0392 _pdbx_refine_tls.S[2][2] 0.0579 _pdbx_refine_tls.S[3][3] -0.0187 _pdbx_refine_tls.S[1][2] 0.1594 _pdbx_refine_tls.S[1][3] -0.0147 _pdbx_refine_tls.S[2][3] 0.0257 _pdbx_refine_tls.S[2][1] -0.1084 _pdbx_refine_tls.S[3][1] 0.0046 _pdbx_refine_tls.S[3][2] -0.3739 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 0 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 274 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.selection ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.5.0053 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 SCALA 3.2.5 5/04/2004 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 5 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 7 SHELXD . ? ? ? ? phasing ? ? ? 8 autoSHARP . ? ? ? ? phasing ? ? ? 9 # _pdbx_entry_details.entry_id 3M1T _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 50 ? A CZ A ARG 50 ? A NH1 A ARG 50 ? A 123.76 120.30 3.46 0.50 N 2 1 NE A ARG 50 ? A CZ A ARG 50 ? A NH2 A ARG 50 ? A 116.78 120.30 -3.52 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 189 ? ? 71.31 34.82 2 1 HIS A 203 ? A -148.38 57.91 3 1 LYS A 249 ? B -103.32 57.49 4 1 VAL A 250 ? B -47.44 152.73 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 18 ? CE ? A LYS 19 CE 2 1 Y 1 A LYS 18 ? NZ ? A LYS 19 NZ 3 1 Y 1 A GLU 30 ? CD ? A GLU 31 CD 4 1 Y 1 A GLU 30 ? OE1 ? A GLU 31 OE1 5 1 Y 1 A GLU 30 ? OE2 ? A GLU 31 OE2 6 1 Y 1 A ARG 75 ? CG ? A ARG 76 CG 7 1 Y 1 A ARG 75 ? CD ? A ARG 76 CD 8 1 Y 1 A ARG 75 ? NE ? A ARG 76 NE 9 1 Y 1 A ARG 75 ? CZ ? A ARG 76 CZ 10 1 Y 1 A ARG 75 ? NH1 ? A ARG 76 NH1 11 1 Y 1 A ARG 75 ? NH2 ? A ARG 76 NH2 12 1 Y 1 A GLN 79 ? CG ? A GLN 80 CG 13 1 Y 1 A GLN 79 ? CD ? A GLN 80 CD 14 1 Y 1 A GLN 79 ? OE1 ? A GLN 80 OE1 15 1 Y 1 A GLN 79 ? NE2 ? A GLN 80 NE2 16 1 Y 1 A ASP 232 ? CG ? A ASP 233 CG 17 1 Y 1 A ASP 232 ? OD1 ? A ASP 233 OD1 18 1 Y 1 A ASP 232 ? OD2 ? A ASP 233 OD2 19 1 Y 1 A LEU 245 ? CG ? A LEU 246 CG 20 1 Y 1 A LEU 245 ? CD1 ? A LEU 246 CD1 21 1 Y 1 A LEU 245 ? CD2 ? A LEU 246 CD2 22 1 Y 1 A LYS 249 ? CE ? A LYS 250 CE 23 1 Y 1 A LYS 249 ? NZ ? A LYS 250 NZ 24 1 Y 1 A GLU 257 ? OE1 ? A GLU 258 OE1 25 1 Y 1 A GLU 257 ? OE2 ? A GLU 258 OE2 26 1 Y 1 A LYS 261 ? CE ? A LYS 262 CE 27 1 Y 1 A LYS 261 ? NZ ? A LYS 262 NZ 28 1 Y 1 A LYS 271 ? NZ ? A LYS 272 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ARG 59 ? A ARG 60 2 1 Y 1 A PHE 60 ? A PHE 61 3 1 Y 1 A GLY 61 ? A GLY 62 4 1 Y 1 A CYS 62 ? A CYS 63 5 1 Y 1 A SER 63 ? A SER 64 6 1 Y 1 A ARG 64 ? A ARG 65 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #