data_3M3O
#
_entry.id 3M3O
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.380
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 3M3O pdb_00003m3o 10.2210/pdb3m3o/pdb
RCSB RCSB058067 ? ?
WWPDB D_1000058067 ? ?
#
loop_
_pdbx_database_related.db_name
_pdbx_database_related.db_id
_pdbx_database_related.details
_pdbx_database_related.content_type
PDB 3AFK 'AAL complexed with Thomsen-Friedenreich antigen' unspecified
PDB 3M3C 'AAL complexed with p-Nitrophenyl TF disaccharide' unspecified
PDB 3M3E 'AAL nutant E66A complexed with p-Nitrophenyl TF disaccharide' unspecified
PDB 3M3Q 'AAL complexed with Ganglosides GM1 pentasaccharide' unspecified
#
_pdbx_database_status.entry_id 3M3O
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site PDBJ
_pdbx_database_status.recvd_initial_deposition_date 2010-03-09
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Feng, L.' 1
'Li, D.' 2
'Wang, D.' 3
#
_citation.id primary
_citation.title
'Structural insights into the recognition mechanism between an antitumor galectin AAL and the Thomsen-Friedenreich antigen'
_citation.journal_abbrev 'Faseb J.'
_citation.journal_volume 24
_citation.page_first 3861
_citation.page_last 3868
_citation.year 2010
_citation.journal_id_ASTM FAJOEC
_citation.country US
_citation.journal_id_ISSN 0892-6638
_citation.journal_id_CSD 2074
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 20530247
_citation.pdbx_database_id_DOI 10.1096/fj.10-159111
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Feng, L.' 1 ?
primary 'Sun, H.' 2 ?
primary 'Zhang, Y.' 3 ?
primary 'Li, D.F.' 4 ?
primary 'Wang, D.C.' 5 ?
#
_cell.entry_id 3M3O
_cell.length_a 42.560
_cell.length_b 42.560
_cell.length_c 125.300
_cell.angle_alpha 90.000
_cell.angle_beta 90.000
_cell.angle_gamma 120.000
_cell.pdbx_unique_axis ?
_cell.Z_PDB 6
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.entry_id 3M3O
_symmetry.space_group_name_H-M 'P 32 2 1'
_symmetry.Int_Tables_number 154
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.space_group_name_Hall ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer man 'Anti-tumor lectin' 16891.684 1 3.1.21.- R85A ? ?
2 branched man 'beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-alpha-D-galactopyranose' 383.349 1 ? ? ? ?
3 non-polymer syn P-NITROPHENOL 139.109 1 ? ? ? ?
4 non-polymer syn '2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL' 209.240 1 ? ? ? ?
5 water nat water 18.015 55 ? ? ? ?
#
loop_
_entity_name_com.entity_id
_entity_name_com.name
1 AAL
2 'Thomsen-Friedenreich antigen'
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code
;QGVNIYNISAGTSVDLAAPVTTGDIVTFFSSALNLNAGAGNPNNTTLNLFAENGAYLLHIAFRLQENVIIFNSRQPDGPW
LVEQAVSDVANQFAGIDGKAMVTVFDHGDKYQVVINEKTVIQYTKQISGLTSSLSYNATEETSIFSTVVEAVTYTGLA
;
_entity_poly.pdbx_seq_one_letter_code_can
;QGVNIYNISAGTSVDLAAPVTTGDIVTFFSSALNLNAGAGNPNNTTLNLFAENGAYLLHIAFRLQENVIIFNSRQPDGPW
LVEQAVSDVANQFAGIDGKAMVTVFDHGDKYQVVINEKTVIQYTKQISGLTSSLSYNATEETSIFSTVVEAVTYTGLA
;
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 GLN n
1 2 GLY n
1 3 VAL n
1 4 ASN n
1 5 ILE n
1 6 TYR n
1 7 ASN n
1 8 ILE n
1 9 SER n
1 10 ALA n
1 11 GLY n
1 12 THR n
1 13 SER n
1 14 VAL n
1 15 ASP n
1 16 LEU n
1 17 ALA n
1 18 ALA n
1 19 PRO n
1 20 VAL n
1 21 THR n
1 22 THR n
1 23 GLY n
1 24 ASP n
1 25 ILE n
1 26 VAL n
1 27 THR n
1 28 PHE n
1 29 PHE n
1 30 SER n
1 31 SER n
1 32 ALA n
1 33 LEU n
1 34 ASN n
1 35 LEU n
1 36 ASN n
1 37 ALA n
1 38 GLY n
1 39 ALA n
1 40 GLY n
1 41 ASN n
1 42 PRO n
1 43 ASN n
1 44 ASN n
1 45 THR n
1 46 THR n
1 47 LEU n
1 48 ASN n
1 49 LEU n
1 50 PHE n
1 51 ALA n
1 52 GLU n
1 53 ASN n
1 54 GLY n
1 55 ALA n
1 56 TYR n
1 57 LEU n
1 58 LEU n
1 59 HIS n
1 60 ILE n
1 61 ALA n
1 62 PHE n
1 63 ARG n
1 64 LEU n
1 65 GLN n
1 66 GLU n
1 67 ASN n
1 68 VAL n
1 69 ILE n
1 70 ILE n
1 71 PHE n
1 72 ASN n
1 73 SER n
1 74 ARG n
1 75 GLN n
1 76 PRO n
1 77 ASP n
1 78 GLY n
1 79 PRO n
1 80 TRP n
1 81 LEU n
1 82 VAL n
1 83 GLU n
1 84 GLN n
1 85 ALA n
1 86 VAL n
1 87 SER n
1 88 ASP n
1 89 VAL n
1 90 ALA n
1 91 ASN n
1 92 GLN n
1 93 PHE n
1 94 ALA n
1 95 GLY n
1 96 ILE n
1 97 ASP n
1 98 GLY n
1 99 LYS n
1 100 ALA n
1 101 MET n
1 102 VAL n
1 103 THR n
1 104 VAL n
1 105 PHE n
1 106 ASP n
1 107 HIS n
1 108 GLY n
1 109 ASP n
1 110 LYS n
1 111 TYR n
1 112 GLN n
1 113 VAL n
1 114 VAL n
1 115 ILE n
1 116 ASN n
1 117 GLU n
1 118 LYS n
1 119 THR n
1 120 VAL n
1 121 ILE n
1 122 GLN n
1 123 TYR n
1 124 THR n
1 125 LYS n
1 126 GLN n
1 127 ILE n
1 128 SER n
1 129 GLY n
1 130 LEU n
1 131 THR n
1 132 SER n
1 133 SER n
1 134 LEU n
1 135 SER n
1 136 TYR n
1 137 ASN n
1 138 ALA n
1 139 THR n
1 140 GLU n
1 141 GLU n
1 142 THR n
1 143 SER n
1 144 ILE n
1 145 PHE n
1 146 SER n
1 147 THR n
1 148 VAL n
1 149 VAL n
1 150 GLU n
1 151 ALA n
1 152 VAL n
1 153 THR n
1 154 TYR n
1 155 THR n
1 156 GLY n
1 157 LEU n
1 158 ALA n
#
_entity_src_gen.entity_id 1
_entity_src_gen.pdbx_src_id 1
_entity_src_gen.pdbx_alt_source_flag sample
_entity_src_gen.pdbx_seq_type ?
_entity_src_gen.pdbx_beg_seq_num ?
_entity_src_gen.pdbx_end_seq_num ?
_entity_src_gen.gene_src_common_name 'Black poplar mushroom'
_entity_src_gen.gene_src_genus ?
_entity_src_gen.pdbx_gene_src_gene AAL
_entity_src_gen.gene_src_species ?
_entity_src_gen.gene_src_strain ?
_entity_src_gen.gene_src_tissue ?
_entity_src_gen.gene_src_tissue_fraction ?
_entity_src_gen.gene_src_details ?
_entity_src_gen.pdbx_gene_src_fragment ?
_entity_src_gen.pdbx_gene_src_scientific_name 'Agrocybe aegerita'
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 5400
_entity_src_gen.pdbx_gene_src_variant ?
_entity_src_gen.pdbx_gene_src_cell_line ?
_entity_src_gen.pdbx_gene_src_atcc ?
_entity_src_gen.pdbx_gene_src_organ ?
_entity_src_gen.pdbx_gene_src_organelle ?
_entity_src_gen.pdbx_gene_src_cell ?
_entity_src_gen.pdbx_gene_src_cellular_location ?
_entity_src_gen.host_org_common_name ?
_entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli'
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562
_entity_src_gen.host_org_genus ?
_entity_src_gen.pdbx_host_org_gene ?
_entity_src_gen.pdbx_host_org_organ ?
_entity_src_gen.host_org_species ?
_entity_src_gen.pdbx_host_org_tissue ?
_entity_src_gen.pdbx_host_org_tissue_fraction ?
_entity_src_gen.pdbx_host_org_strain 'BL21(DE3)'
_entity_src_gen.pdbx_host_org_variant ?
_entity_src_gen.pdbx_host_org_cell_line ?
_entity_src_gen.pdbx_host_org_atcc ?
_entity_src_gen.pdbx_host_org_culture_collection ?
_entity_src_gen.pdbx_host_org_cell ?
_entity_src_gen.pdbx_host_org_organelle ?
_entity_src_gen.pdbx_host_org_cellular_location ?
_entity_src_gen.pdbx_host_org_vector_type plasmid
_entity_src_gen.pdbx_host_org_vector ?
_entity_src_gen.host_org_details ?
_entity_src_gen.expression_system_id ?
_entity_src_gen.plasmid_name pET22b
_entity_src_gen.plasmid_details ?
_entity_src_gen.pdbx_description ?
#
_struct_ref.id 1
_struct_ref.db_name UNP
_struct_ref.db_code ATLE_AGRAE
_struct_ref.pdbx_db_accession Q6WY08
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code
;QGVNIYNISAGTSVDLAAPVTTGDIVTFFSSALNLNAGAGNPNNTTLNLFAENGAYLLHIAFRLQENVIIFNSRQPDGPW
LVEQRVSDVANQFAGIDGKAMVTVFDHGDKYQVVINEKTVIQYTKQISGLTLSLSYNATEETSIFSTVVEAVTYTGLA
;
_struct_ref.pdbx_align_begin 1
_struct_ref.pdbx_db_isoform ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 3M3O
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 158
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession Q6WY08
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 158
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 158
#
loop_
_struct_ref_seq_dif.align_id
_struct_ref_seq_dif.pdbx_pdb_id_code
_struct_ref_seq_dif.mon_id
_struct_ref_seq_dif.pdbx_pdb_strand_id
_struct_ref_seq_dif.seq_num
_struct_ref_seq_dif.pdbx_pdb_ins_code
_struct_ref_seq_dif.pdbx_seq_db_name
_struct_ref_seq_dif.pdbx_seq_db_accession_code
_struct_ref_seq_dif.db_mon_id
_struct_ref_seq_dif.pdbx_seq_db_seq_num
_struct_ref_seq_dif.details
_struct_ref_seq_dif.pdbx_auth_seq_num
_struct_ref_seq_dif.pdbx_ordinal
1 3M3O ALA A 85 ? UNP Q6WY08 ARG 85 'engineered mutation' 85 1
1 3M3O SER A 132 ? UNP Q6WY08 LEU 132 'SEE REMARK 999' 132 2
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
A2G 'D-saccharide, alpha linking' . 2-acetamido-2-deoxy-alpha-D-galactopyranose
;N-acetyl-alpha-D-galactosamine; 2-acetamido-2-deoxy-alpha-D-galactose; 2-acetamido-2-deoxy-D-galactose; 2-acetamido-2-deoxy-galactose; N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE
;
'C8 H15 N O6' 221.208
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103
BTB non-polymer . '2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL' 'BIS-TRIS BUFFER'
'C8 H19 N O5' 209.240
GAL 'D-saccharide, beta linking' . beta-D-galactopyranose
'beta-D-galactose; D-galactose; galactose' 'C6 H12 O6' 180.156
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162
HOH non-polymer . WATER ? 'H2 O' 18.015
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211
NPO non-polymer . P-NITROPHENOL ? 'C6 H5 N O3' 139.109
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189
PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
#
_exptl.crystals_number 1
_exptl.entry_id 3M3O
_exptl.method 'X-RAY DIFFRACTION'
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 1.94
_exptl_crystal.density_percent_sol 36.58
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'hanging drop'
_exptl_crystal_grow.pH 5.5
_exptl_crystal_grow.temp 298
_exptl_crystal_grow.pdbx_details '25% PEG3350, 0.2M LiCl, 5% acetone, pH 5.5, hanging drop, temperature 298K'
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pdbx_pH_range .
#
_diffrn.id 1
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector 'IMAGE PLATE'
_diffrn_detector.type 'RIGAKU RAXIS IV'
_diffrn_detector.pdbx_collection_date 2009-08-25
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.monochromator ?
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1.5418
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source 'ROTATING ANODE'
_diffrn_source.type 'RIGAKU FR-E+ SUPERBRIGHT'
_diffrn_source.pdbx_wavelength_list 1.5418
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_synchrotron_site ?
_diffrn_source.pdbx_synchrotron_beamline ?
#
_reflns.entry_id 3M3O
_reflns.d_resolution_high 2.1
_reflns.d_resolution_low 36.893
_reflns.number_obs 8216
_reflns.pdbx_Rsym_value 0.047
_reflns.pdbx_redundancy 5.900
_reflns.percent_possible_obs 100.000
_reflns.observed_criterion_sigma_F ?
_reflns.observed_criterion_sigma_I ?
_reflns.number_all 8217
_reflns.pdbx_Rmerge_I_obs 0.047
_reflns.pdbx_netI_over_sigmaI 10.4
_reflns.B_iso_Wilson_estimate 22.1
_reflns.R_free_details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
#
_reflns_shell.d_res_high 2.1
_reflns_shell.d_res_low 2.21
_reflns_shell.percent_possible_obs ?
_reflns_shell.percent_possible_all 100
_reflns_shell.Rmerge_I_obs 0.279
_reflns_shell.meanI_over_sigI_obs 5.7
_reflns_shell.pdbx_Rsym_value 0.279
_reflns_shell.pdbx_redundancy 5.9
_reflns_shell.number_unique_all 1183
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_unique_obs ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_diffrn_id ?
_reflns_shell.pdbx_ordinal 1
#
_refine.entry_id 3M3O
_refine.ls_d_res_high 2.100
_refine.ls_d_res_low 36.86
_refine.pdbx_ls_sigma_F 0.00
_refine.ls_percent_reflns_obs 100.000
_refine.ls_number_reflns_obs 8216
_refine.ls_R_factor_R_work 0.217
_refine.ls_R_factor_R_free 0.253
_refine.ls_percent_reflns_R_free 5.400
_refine.ls_number_reflns_R_free 446
_refine.B_iso_mean 37.242
_refine.solvent_model_param_bsol 47.237
_refine.aniso_B[1][1] 6.919
_refine.aniso_B[2][2] 6.919
_refine.aniso_B[3][3] -13.837
_refine.aniso_B[1][2] 0.000
_refine.aniso_B[1][3] 0.000
_refine.aniso_B[2][3] 0.000
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.overall_FOM_work_R_set 0.803
_refine.pdbx_ls_sigma_I ?
_refine.ls_number_reflns_all 8217
_refine.ls_R_factor_all 0.235
_refine.ls_R_factor_obs 0.235
_refine.ls_redundancy_reflns_obs ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.pdbx_starting_model 2ZGL
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_stereochemistry_target_values 'Engh & Huber'
_refine.solvent_model_details ?
_refine.solvent_model_param_ksol ?
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.pdbx_isotropic_thermal_model Isotropic
_refine.details ?
_refine.B_iso_min ?
_refine.B_iso_max ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.overall_SU_ML ?
_refine.overall_SU_B ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_overall_phase_error ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_analyze.entry_id 3M3O
_refine_analyze.Luzzati_coordinate_error_obs 0.26
_refine_analyze.Luzzati_sigma_a_obs 0.17
_refine_analyze.Luzzati_d_res_low_obs 5.00
_refine_analyze.Luzzati_coordinate_error_free 0.36
_refine_analyze.Luzzati_sigma_a_free 0.24
_refine_analyze.Luzzati_d_res_low_free ?
_refine_analyze.number_disordered_residues ?
_refine_analyze.occupancy_sum_non_hydrogen ?
_refine_analyze.occupancy_sum_hydrogen ?
_refine_analyze.pdbx_Luzzati_d_res_high_obs ?
_refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION'
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 1193
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 49
_refine_hist.number_atoms_solvent 55
_refine_hist.number_atoms_total 1297
_refine_hist.d_res_high 2.100
_refine_hist.d_res_low 36.86
#
loop_
_refine_ls_restr.type
_refine_ls_restr.number
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
c_bond_d ? 0.006 ? ? 'X-RAY DIFFRACTION' ?
c_angle_deg ? 1.427 ? ? 'X-RAY DIFFRACTION' ?
#
loop_
_refine_ls_shell.d_res_high
_refine_ls_shell.d_res_low
_refine_ls_shell.pdbx_total_number_of_bins_used
_refine_ls_shell.percent_reflns_obs
_refine_ls_shell.number_reflns_R_work
_refine_ls_shell.R_factor_all
_refine_ls_shell.R_factor_R_work
_refine_ls_shell.R_factor_R_free
_refine_ls_shell.percent_reflns_R_free
_refine_ls_shell.number_reflns_R_free
_refine_ls_shell.R_factor_R_free_error
_refine_ls_shell.number_reflns_all
_refine_ls_shell.number_reflns_obs
_refine_ls_shell.redundancy_reflns_obs
_refine_ls_shell.pdbx_refine_id
2.100 2.200 8 . 943 . 0.240 0.316 . 49 . 992 . . 'X-RAY DIFFRACTION'
2.200 2.310 8 . 939 . 0.226 0.308 . 57 . 996 . . 'X-RAY DIFFRACTION'
2.310 2.460 8 . 952 . 0.234 0.267 . 53 . 1005 . . 'X-RAY DIFFRACTION'
2.460 2.650 8 . 969 . 0.250 0.396 . 59 . 1028 . . 'X-RAY DIFFRACTION'
2.650 2.910 8 . 950 . 0.268 0.333 . 49 . 999 . . 'X-RAY DIFFRACTION'
2.910 3.330 8 . 972 . 0.235 0.239 . 49 . 1021 . . 'X-RAY DIFFRACTION'
3.330 4.200 8 . 984 . 0.193 0.265 . 67 . 1051 . . 'X-RAY DIFFRACTION'
4.200 50.000 8 . 1061 . 0.196 0.190 . 63 . 1124 . . 'X-RAY DIFFRACTION'
#
loop_
_pdbx_xplor_file.serial_no
_pdbx_xplor_file.param_file
_pdbx_xplor_file.topol_file
_pdbx_xplor_file.pdbx_refine_id
1 protein_rep.param ? 'X-RAY DIFFRACTION'
2 tfg.param ? 'X-RAY DIFFRACTION'
3 BTB.param ? 'X-RAY DIFFRACTION'
4 water_rep.param ? 'X-RAY DIFFRACTION'
#
_struct.entry_id 3M3O
_struct.title
'Crystal Structure of Agrocybe aegerita lectin AAL mutant R85A complexed with p-Nitrophenyl TF disaccharide'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 3M3O
_struct_keywords.text
;galectin, AAL, muitant, Thomsen-Friedenreich antigen, Apoptosis, Hydrolase, Lectin, Nuclease, GAL-BETA-1, 3-GALNAC-ALPHA-O-P-Nitrophenyl
;
_struct_keywords.pdbx_keywords HYDROLASE
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
D N N 4 ?
E N N 5 ?
#
_struct_biol.id 1
_struct_biol.details ?
#
_struct_conf.conf_type_id HELX_P
_struct_conf.id HELX_P1
_struct_conf.pdbx_PDB_helix_id 1
_struct_conf.beg_label_comp_id ASP
_struct_conf.beg_label_asym_id A
_struct_conf.beg_label_seq_id 88
_struct_conf.pdbx_beg_PDB_ins_code ?
_struct_conf.end_label_comp_id ALA
_struct_conf.end_label_asym_id A
_struct_conf.end_label_seq_id 94
_struct_conf.pdbx_end_PDB_ins_code ?
_struct_conf.beg_auth_comp_id ASP
_struct_conf.beg_auth_asym_id A
_struct_conf.beg_auth_seq_id 88
_struct_conf.end_auth_comp_id ALA
_struct_conf.end_auth_asym_id A
_struct_conf.end_auth_seq_id 94
_struct_conf.pdbx_PDB_helix_class 1
_struct_conf.details ?
_struct_conf.pdbx_PDB_helix_length 7
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale one ? C NPO . OH ? ? ? 1_555 B A2G . C1 ? ? A NPO 242 B A2G 1 1_555 ? ? ? ? ? ? ? 1.435 ? ?
covale2 covale both ? B A2G . O3 ? ? ? 1_555 B GAL . C1 ? ? B A2G 1 B GAL 2 1_555 ? ? ? ? ? ? ? 1.435 ? ?
#
_struct_conn_type.id covale
_struct_conn_type.criteria ?
_struct_conn_type.reference ?
#
_struct_mon_prot_cis.pdbx_id 1
_struct_mon_prot_cis.label_comp_id ASN
_struct_mon_prot_cis.label_seq_id 41
_struct_mon_prot_cis.label_asym_id A
_struct_mon_prot_cis.label_alt_id .
_struct_mon_prot_cis.pdbx_PDB_ins_code ?
_struct_mon_prot_cis.auth_comp_id ASN
_struct_mon_prot_cis.auth_seq_id 41
_struct_mon_prot_cis.auth_asym_id A
_struct_mon_prot_cis.pdbx_label_comp_id_2 PRO
_struct_mon_prot_cis.pdbx_label_seq_id_2 42
_struct_mon_prot_cis.pdbx_label_asym_id_2 A
_struct_mon_prot_cis.pdbx_PDB_ins_code_2 ?
_struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO
_struct_mon_prot_cis.pdbx_auth_seq_id_2 42
_struct_mon_prot_cis.pdbx_auth_asym_id_2 A
_struct_mon_prot_cis.pdbx_PDB_model_num 1
_struct_mon_prot_cis.pdbx_omega_angle 0.16
#
loop_
_struct_sheet.id
_struct_sheet.type
_struct_sheet.number_strands
_struct_sheet.details
A ? 6 ?
B ? 6 ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
A 1 2 ? anti-parallel
A 2 3 ? anti-parallel
A 3 4 ? anti-parallel
A 4 5 ? anti-parallel
A 5 6 ? anti-parallel
B 1 2 ? anti-parallel
B 2 3 ? anti-parallel
B 3 4 ? anti-parallel
B 4 5 ? anti-parallel
B 5 6 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
A 1 GLY A 2 ? SER A 9 ? GLY A 2 SER A 9
A 2 VAL A 148 ? THR A 155 ? VAL A 148 THR A 155
A 3 ILE A 25 ? SER A 30 ? ILE A 25 SER A 30
A 4 ALA A 100 ? ASP A 106 ? ALA A 100 ASP A 106
A 5 LYS A 110 ? ILE A 115 ? LYS A 110 ILE A 115
A 6 LYS A 118 ? THR A 124 ? LYS A 118 THR A 124
B 1 THR A 12 ? VAL A 20 ? THR A 12 VAL A 20
B 2 THR A 131 ? ASN A 137 ? THR A 131 ASN A 137
B 3 THR A 45 ? PHE A 50 ? THR A 45 PHE A 50
B 4 TYR A 56 ? ARG A 63 ? TYR A 56 ARG A 63
B 5 VAL A 68 ? ARG A 74 ? VAL A 68 ARG A 74
B 6 GLN A 84 ? SER A 87 ? GLN A 84 SER A 87
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
A 1 2 N TYR A 6 ? N TYR A 6 O ALA A 151 ? O ALA A 151
A 2 3 O GLU A 150 ? O GLU A 150 N PHE A 29 ? N PHE A 29
A 3 4 N PHE A 28 ? N PHE A 28 O VAL A 102 ? O VAL A 102
A 4 5 N THR A 103 ? N THR A 103 O VAL A 114 ? O VAL A 114
A 5 6 N VAL A 113 ? N VAL A 113 O VAL A 120 ? O VAL A 120
B 1 2 N LEU A 16 ? N LEU A 16 O SER A 132 ? O SER A 132
B 2 3 O SER A 133 ? O SER A 133 N PHE A 50 ? N PHE A 50
B 3 4 N THR A 45 ? N THR A 45 O PHE A 62 ? O PHE A 62
B 4 5 N TYR A 56 ? N TYR A 56 O ARG A 74 ? O ARG A 74
B 5 6 N ILE A 69 ? N ILE A 69 O VAL A 86 ? O VAL A 86
#
_atom_sites.entry_id 3M3O
_atom_sites.fract_transf_matrix[1][1] 0.023496
_atom_sites.fract_transf_matrix[1][2] 0.013566
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.027131
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.007981
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
O
S
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 GLN 1 1 1 GLN GLN A . n
A 1 2 GLY 2 2 2 GLY GLY A . n
A 1 3 VAL 3 3 3 VAL VAL A . n
A 1 4 ASN 4 4 4 ASN ASN A . n
A 1 5 ILE 5 5 5 ILE ILE A . n
A 1 6 TYR 6 6 6 TYR TYR A . n
A 1 7 ASN 7 7 7 ASN ASN A . n
A 1 8 ILE 8 8 8 ILE ILE A . n
A 1 9 SER 9 9 9 SER SER A . n
A 1 10 ALA 10 10 10 ALA ALA A . n
A 1 11 GLY 11 11 11 GLY GLY A . n
A 1 12 THR 12 12 12 THR THR A . n
A 1 13 SER 13 13 13 SER SER A . n
A 1 14 VAL 14 14 14 VAL VAL A . n
A 1 15 ASP 15 15 15 ASP ASP A . n
A 1 16 LEU 16 16 16 LEU LEU A . n
A 1 17 ALA 17 17 17 ALA ALA A . n
A 1 18 ALA 18 18 18 ALA ALA A . n
A 1 19 PRO 19 19 19 PRO PRO A . n
A 1 20 VAL 20 20 20 VAL VAL A . n
A 1 21 THR 21 21 21 THR THR A . n
A 1 22 THR 22 22 22 THR THR A . n
A 1 23 GLY 23 23 23 GLY GLY A . n
A 1 24 ASP 24 24 24 ASP ASP A . n
A 1 25 ILE 25 25 25 ILE ILE A . n
A 1 26 VAL 26 26 26 VAL VAL A . n
A 1 27 THR 27 27 27 THR THR A . n
A 1 28 PHE 28 28 28 PHE PHE A . n
A 1 29 PHE 29 29 29 PHE PHE A . n
A 1 30 SER 30 30 30 SER SER A . n
A 1 31 SER 31 31 31 SER SER A . n
A 1 32 ALA 32 32 32 ALA ALA A . n
A 1 33 LEU 33 33 33 LEU LEU A . n
A 1 34 ASN 34 34 34 ASN ASN A . n
A 1 35 LEU 35 35 35 LEU LEU A . n
A 1 36 ASN 36 36 36 ASN ASN A . n
A 1 37 ALA 37 37 37 ALA ALA A . n
A 1 38 GLY 38 38 38 GLY GLY A . n
A 1 39 ALA 39 39 39 ALA ALA A . n
A 1 40 GLY 40 40 40 GLY GLY A . n
A 1 41 ASN 41 41 41 ASN ASN A . n
A 1 42 PRO 42 42 42 PRO PRO A . n
A 1 43 ASN 43 43 43 ASN ASN A . n
A 1 44 ASN 44 44 44 ASN ASN A . n
A 1 45 THR 45 45 45 THR THR A . n
A 1 46 THR 46 46 46 THR THR A . n
A 1 47 LEU 47 47 47 LEU LEU A . n
A 1 48 ASN 48 48 48 ASN ASN A . n
A 1 49 LEU 49 49 49 LEU LEU A . n
A 1 50 PHE 50 50 50 PHE PHE A . n
A 1 51 ALA 51 51 51 ALA ALA A . n
A 1 52 GLU 52 52 52 GLU GLU A . n
A 1 53 ASN 53 53 53 ASN ASN A . n
A 1 54 GLY 54 54 54 GLY GLY A . n
A 1 55 ALA 55 55 55 ALA ALA A . n
A 1 56 TYR 56 56 56 TYR TYR A . n
A 1 57 LEU 57 57 57 LEU LEU A . n
A 1 58 LEU 58 58 58 LEU LEU A . n
A 1 59 HIS 59 59 59 HIS HIS A . n
A 1 60 ILE 60 60 60 ILE ILE A . n
A 1 61 ALA 61 61 61 ALA ALA A . n
A 1 62 PHE 62 62 62 PHE PHE A . n
A 1 63 ARG 63 63 63 ARG ARG A . n
A 1 64 LEU 64 64 64 LEU LEU A . n
A 1 65 GLN 65 65 65 GLN GLN A . n
A 1 66 GLU 66 66 66 GLU GLU A . n
A 1 67 ASN 67 67 67 ASN ASN A . n
A 1 68 VAL 68 68 68 VAL VAL A . n
A 1 69 ILE 69 69 69 ILE ILE A . n
A 1 70 ILE 70 70 70 ILE ILE A . n
A 1 71 PHE 71 71 71 PHE PHE A . n
A 1 72 ASN 72 72 72 ASN ASN A . n
A 1 73 SER 73 73 73 SER SER A . n
A 1 74 ARG 74 74 74 ARG ARG A . n
A 1 75 GLN 75 75 75 GLN GLN A . n
A 1 76 PRO 76 76 76 PRO PRO A . n
A 1 77 ASP 77 77 77 ASP ASP A . n
A 1 78 GLY 78 78 78 GLY GLY A . n
A 1 79 PRO 79 79 79 PRO PRO A . n
A 1 80 TRP 80 80 80 TRP TRP A . n
A 1 81 LEU 81 81 81 LEU LEU A . n
A 1 82 VAL 82 82 82 VAL VAL A . n
A 1 83 GLU 83 83 83 GLU GLU A . n
A 1 84 GLN 84 84 84 GLN GLN A . n
A 1 85 ALA 85 85 85 ALA ALA A . n
A 1 86 VAL 86 86 86 VAL VAL A . n
A 1 87 SER 87 87 87 SER SER A . n
A 1 88 ASP 88 88 88 ASP ASP A . n
A 1 89 VAL 89 89 89 VAL VAL A . n
A 1 90 ALA 90 90 90 ALA ALA A . n
A 1 91 ASN 91 91 91 ASN ASN A . n
A 1 92 GLN 92 92 92 GLN GLN A . n
A 1 93 PHE 93 93 93 PHE PHE A . n
A 1 94 ALA 94 94 94 ALA ALA A . n
A 1 95 GLY 95 95 95 GLY GLY A . n
A 1 96 ILE 96 96 96 ILE ILE A . n
A 1 97 ASP 97 97 97 ASP ASP A . n
A 1 98 GLY 98 98 98 GLY GLY A . n
A 1 99 LYS 99 99 99 LYS LYS A . n
A 1 100 ALA 100 100 100 ALA ALA A . n
A 1 101 MET 101 101 101 MET MET A . n
A 1 102 VAL 102 102 102 VAL VAL A . n
A 1 103 THR 103 103 103 THR THR A . n
A 1 104 VAL 104 104 104 VAL VAL A . n
A 1 105 PHE 105 105 105 PHE PHE A . n
A 1 106 ASP 106 106 106 ASP ASP A . n
A 1 107 HIS 107 107 107 HIS HIS A . n
A 1 108 GLY 108 108 108 GLY GLY A . n
A 1 109 ASP 109 109 109 ASP ASP A . n
A 1 110 LYS 110 110 110 LYS LYS A . n
A 1 111 TYR 111 111 111 TYR TYR A . n
A 1 112 GLN 112 112 112 GLN GLN A . n
A 1 113 VAL 113 113 113 VAL VAL A . n
A 1 114 VAL 114 114 114 VAL VAL A . n
A 1 115 ILE 115 115 115 ILE ILE A . n
A 1 116 ASN 116 116 116 ASN ASN A . n
A 1 117 GLU 117 117 117 GLU GLU A . n
A 1 118 LYS 118 118 118 LYS LYS A . n
A 1 119 THR 119 119 119 THR THR A . n
A 1 120 VAL 120 120 120 VAL VAL A . n
A 1 121 ILE 121 121 121 ILE ILE A . n
A 1 122 GLN 122 122 122 GLN GLN A . n
A 1 123 TYR 123 123 123 TYR TYR A . n
A 1 124 THR 124 124 124 THR THR A . n
A 1 125 LYS 125 125 125 LYS LYS A . n
A 1 126 GLN 126 126 126 GLN GLN A . n
A 1 127 ILE 127 127 127 ILE ILE A . n
A 1 128 SER 128 128 128 SER SER A . n
A 1 129 GLY 129 129 129 GLY GLY A . n
A 1 130 LEU 130 130 130 LEU LEU A . n
A 1 131 THR 131 131 131 THR THR A . n
A 1 132 SER 132 132 132 SER SER A . n
A 1 133 SER 133 133 133 SER SER A . n
A 1 134 LEU 134 134 134 LEU LEU A . n
A 1 135 SER 135 135 135 SER SER A . n
A 1 136 TYR 136 136 136 TYR TYR A . n
A 1 137 ASN 137 137 137 ASN ASN A . n
A 1 138 ALA 138 138 138 ALA ALA A . n
A 1 139 THR 139 139 139 THR THR A . n
A 1 140 GLU 140 140 140 GLU GLU A . n
A 1 141 GLU 141 141 141 GLU GLU A . n
A 1 142 THR 142 142 142 THR THR A . n
A 1 143 SER 143 143 143 SER SER A . n
A 1 144 ILE 144 144 144 ILE ILE A . n
A 1 145 PHE 145 145 145 PHE PHE A . n
A 1 146 SER 146 146 146 SER SER A . n
A 1 147 THR 147 147 147 THR THR A . n
A 1 148 VAL 148 148 148 VAL VAL A . n
A 1 149 VAL 149 149 149 VAL VAL A . n
A 1 150 GLU 150 150 150 GLU GLU A . n
A 1 151 ALA 151 151 151 ALA ALA A . n
A 1 152 VAL 152 152 152 VAL VAL A . n
A 1 153 THR 153 153 153 THR THR A . n
A 1 154 TYR 154 154 154 TYR TYR A . n
A 1 155 THR 155 155 155 THR THR A . n
A 1 156 GLY 156 156 156 GLY GLY A . n
A 1 157 LEU 157 157 157 LEU LEU A . n
A 1 158 ALA 158 158 158 ALA ALA A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 NPO 1 242 242 NPO NPO A .
D 4 BTB 1 159 100 BTB BTB A .
E 5 HOH 1 160 1 HOH HOH A .
E 5 HOH 2 161 2 HOH HOH A .
E 5 HOH 3 162 3 HOH HOH A .
E 5 HOH 4 163 4 HOH HOH A .
E 5 HOH 5 164 6 HOH HOH A .
E 5 HOH 6 165 7 HOH HOH A .
E 5 HOH 7 166 8 HOH HOH A .
E 5 HOH 8 167 9 HOH HOH A .
E 5 HOH 9 168 10 HOH HOH A .
E 5 HOH 10 169 12 HOH HOH A .
E 5 HOH 11 170 13 HOH HOH A .
E 5 HOH 12 171 15 HOH HOH A .
E 5 HOH 13 172 16 HOH HOH A .
E 5 HOH 14 173 17 HOH HOH A .
E 5 HOH 15 174 18 HOH HOH A .
E 5 HOH 16 175 20 HOH HOH A .
E 5 HOH 17 176 21 HOH HOH A .
E 5 HOH 18 177 22 HOH HOH A .
E 5 HOH 19 178 23 HOH HOH A .
E 5 HOH 20 179 24 HOH HOH A .
E 5 HOH 21 180 25 HOH HOH A .
E 5 HOH 22 181 26 HOH HOH A .
E 5 HOH 23 182 27 HOH HOH A .
E 5 HOH 24 183 28 HOH HOH A .
E 5 HOH 25 184 29 HOH HOH A .
E 5 HOH 26 185 30 HOH HOH A .
E 5 HOH 27 186 31 HOH HOH A .
E 5 HOH 28 187 32 HOH HOH A .
E 5 HOH 29 188 33 HOH HOH A .
E 5 HOH 30 189 34 HOH HOH A .
E 5 HOH 31 190 35 HOH HOH A .
E 5 HOH 32 191 36 HOH HOH A .
E 5 HOH 33 192 37 HOH HOH A .
E 5 HOH 34 193 38 HOH HOH A .
E 5 HOH 35 194 39 HOH HOH A .
E 5 HOH 36 195 40 HOH HOH A .
E 5 HOH 37 196 42 HOH HOH A .
E 5 HOH 38 197 43 HOH HOH A .
E 5 HOH 39 198 44 HOH HOH A .
E 5 HOH 40 199 45 HOH HOH A .
E 5 HOH 41 200 46 HOH HOH A .
E 5 HOH 42 201 47 HOH HOH A .
E 5 HOH 43 202 48 HOH HOH A .
E 5 HOH 44 203 50 HOH HOH A .
E 5 HOH 45 204 51 HOH HOH A .
E 5 HOH 46 205 52 HOH HOH A .
E 5 HOH 47 206 53 HOH HOH A .
E 5 HOH 48 207 54 HOH HOH A .
E 5 HOH 49 208 55 HOH HOH A .
E 5 HOH 50 209 56 HOH HOH A .
E 5 HOH 51 210 57 HOH HOH A .
E 5 HOH 52 211 58 HOH HOH A .
E 5 HOH 53 212 59 HOH HOH A .
E 5 HOH 54 213 60 HOH HOH A .
E 5 HOH 55 214 61 HOH HOH A .
#
_pdbx_molecule_features.prd_id PRD_900084
_pdbx_molecule_features.name 'Thomsen-Friedenreich antigen'
_pdbx_molecule_features.type Oligosaccharide
_pdbx_molecule_features.class Antigen
_pdbx_molecule_features.details oligosaccharide
#
_pdbx_molecule.instance_id 1
_pdbx_molecule.prd_id PRD_900084
_pdbx_molecule.asym_id B
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 1760 ?
1 MORE -12 ?
1 'SSA (A^2)' 12620 ?
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 5_555 x-y,-y,-z+1/3 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 41.7666666667
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2010-12-01
2 'Structure model' 1 1 2011-07-13
3 'Structure model' 2 0 2020-07-29
4 'Structure model' 2 1 2023-11-01
#
loop_
_pdbx_audit_revision_details.ordinal
_pdbx_audit_revision_details.revision_ordinal
_pdbx_audit_revision_details.data_content_type
_pdbx_audit_revision_details.provider
_pdbx_audit_revision_details.type
_pdbx_audit_revision_details.description
_pdbx_audit_revision_details.details
1 1 'Structure model' repository 'Initial release' ? ?
2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Atomic model'
3 3 'Structure model' 'Data collection'
4 3 'Structure model' 'Database references'
5 3 'Structure model' 'Derived calculations'
6 3 'Structure model' 'Structure summary'
7 4 'Structure model' 'Data collection'
8 4 'Structure model' 'Database references'
9 4 'Structure model' 'Refinement description'
10 4 'Structure model' 'Structure summary'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 3 'Structure model' atom_site
2 3 'Structure model' chem_comp
3 3 'Structure model' entity
4 3 'Structure model' entity_name_com
5 3 'Structure model' pdbx_branch_scheme
6 3 'Structure model' pdbx_chem_comp_identifier
7 3 'Structure model' pdbx_entity_branch
8 3 'Structure model' pdbx_entity_branch_descriptor
9 3 'Structure model' pdbx_entity_branch_link
10 3 'Structure model' pdbx_entity_branch_list
11 3 'Structure model' pdbx_entity_nonpoly
12 3 'Structure model' pdbx_molecule_features
13 3 'Structure model' pdbx_nonpoly_scheme
14 3 'Structure model' pdbx_struct_assembly_gen
15 3 'Structure model' struct_asym
16 3 'Structure model' struct_conn
17 3 'Structure model' struct_ref_seq_dif
18 3 'Structure model' struct_site
19 3 'Structure model' struct_site_gen
20 4 'Structure model' chem_comp
21 4 'Structure model' chem_comp_atom
22 4 'Structure model' chem_comp_bond
23 4 'Structure model' database_2
24 4 'Structure model' pdbx_initial_refinement_model
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 3 'Structure model' '_atom_site.B_iso_or_equiv'
2 3 'Structure model' '_atom_site.Cartn_x'
3 3 'Structure model' '_atom_site.Cartn_y'
4 3 'Structure model' '_atom_site.Cartn_z'
5 3 'Structure model' '_atom_site.auth_asym_id'
6 3 'Structure model' '_atom_site.auth_atom_id'
7 3 'Structure model' '_atom_site.auth_comp_id'
8 3 'Structure model' '_atom_site.auth_seq_id'
9 3 'Structure model' '_atom_site.label_asym_id'
10 3 'Structure model' '_atom_site.label_atom_id'
11 3 'Structure model' '_atom_site.label_comp_id'
12 3 'Structure model' '_atom_site.label_entity_id'
13 3 'Structure model' '_atom_site.type_symbol'
14 3 'Structure model' '_chem_comp.name'
15 3 'Structure model' '_chem_comp.type'
16 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list'
17 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
18 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id'
19 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id'
20 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id'
21 3 'Structure model' '_struct_conn.ptnr1_label_asym_id'
22 3 'Structure model' '_struct_conn.ptnr1_label_atom_id'
23 3 'Structure model' '_struct_conn.ptnr1_label_comp_id'
24 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id'
25 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id'
26 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
27 3 'Structure model' '_struct_conn.ptnr2_label_asym_id'
28 3 'Structure model' '_struct_conn.ptnr2_label_atom_id'
29 3 'Structure model' '_struct_conn.ptnr2_label_comp_id'
30 3 'Structure model' '_struct_ref_seq_dif.details'
31 4 'Structure model' '_chem_comp.pdbx_synonyms'
32 4 'Structure model' '_database_2.pdbx_DOI'
33 4 'Structure model' '_database_2.pdbx_database_accession'
#
loop_
_software.name
_software.version
_software.date
_software.type
_software.contact_author
_software.contact_author_email
_software.classification
_software.location
_software.language
_software.citation_id
_software.pdbx_ordinal
SCALA . ? other 'Phil Evans' pre@mrc-lmb.cam.ac.uk 'data processing'
http://www.ccp4.ac.uk/dist/html/INDEX.html Fortran_77 ? 1
CNS . ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement
http://cns.csb.yale.edu/v1.1/ Fortran_77 ? 2
PDB_EXTRACT 3.004 'September 10, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction'
http://pdb.rutgers.edu/software/ C++ ? 3
CrystalClear . ? ? ? ? 'data collection' ? ? ? 4
MOSFLM . ? ? ? ? 'data reduction' ? ? ? 5
SCALA . ? ? ? ? 'data scaling' ? ? ? 6
PHASER . ? ? ? ? phasing ? ? ? 7
#
_pdbx_entry_details.entry_id 3M3O
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.sequence_details 'IT IS AN ALLELE GENE OF THE GENE IN THE GENBANK DATABASE.'
_pdbx_entry_details.compound_details ?
_pdbx_entry_details.source_details ?
_pdbx_entry_details.has_ligand_of_interest ?
#
_pdbx_validate_symm_contact.id 1
_pdbx_validate_symm_contact.PDB_model_num 1
_pdbx_validate_symm_contact.auth_atom_id_1 O
_pdbx_validate_symm_contact.auth_asym_id_1 A
_pdbx_validate_symm_contact.auth_comp_id_1 HOH
_pdbx_validate_symm_contact.auth_seq_id_1 197
_pdbx_validate_symm_contact.PDB_ins_code_1 ?
_pdbx_validate_symm_contact.label_alt_id_1 ?
_pdbx_validate_symm_contact.site_symmetry_1 1_555
_pdbx_validate_symm_contact.auth_atom_id_2 O
_pdbx_validate_symm_contact.auth_asym_id_2 A
_pdbx_validate_symm_contact.auth_comp_id_2 HOH
_pdbx_validate_symm_contact.auth_seq_id_2 197
_pdbx_validate_symm_contact.PDB_ins_code_2 ?
_pdbx_validate_symm_contact.label_alt_id_2 ?
_pdbx_validate_symm_contact.site_symmetry_2 4_555
_pdbx_validate_symm_contact.dist 1.65
#
loop_
_pdbx_validate_torsion.id
_pdbx_validate_torsion.PDB_model_num
_pdbx_validate_torsion.auth_comp_id
_pdbx_validate_torsion.auth_asym_id
_pdbx_validate_torsion.auth_seq_id
_pdbx_validate_torsion.PDB_ins_code
_pdbx_validate_torsion.label_alt_id
_pdbx_validate_torsion.phi
_pdbx_validate_torsion.psi
1 1 LEU A 81 ? ? -87.94 -153.79
2 1 ASP A 88 ? ? 76.16 91.33
3 1 ASN A 116 ? ? 59.65 -109.28
4 1 GLN A 122 ? ? -113.00 75.09
5 1 ALA A 138 ? ? 176.55 167.27
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
A2G O5 O N N 1
A2G C1 C N S 2
A2G O1 O N N 3
A2G C2 C N R 4
A2G N2 N N N 5
A2G C3 C N R 6
A2G O3 O N N 7
A2G C4 C N R 8
A2G O4 O N N 9
A2G C5 C N R 10
A2G C6 C N N 11
A2G O6 O N N 12
A2G C7 C N N 13
A2G O7 O N N 14
A2G C8 C N N 15
A2G H1 H N N 16
A2G HO1 H N N 17
A2G H2 H N N 18
A2G HN2 H N N 19
A2G H3 H N N 20
A2G HO3 H N N 21
A2G H4 H N N 22
A2G HO4 H N N 23
A2G H5 H N N 24
A2G H61 H N N 25
A2G H81 H N N 26
A2G H82 H N N 27
A2G H83 H N N 28
A2G H62 H N N 29
A2G HO6 H N N 30
ALA N N N N 31
ALA CA C N S 32
ALA C C N N 33
ALA O O N N 34
ALA CB C N N 35
ALA OXT O N N 36
ALA H H N N 37
ALA H2 H N N 38
ALA HA H N N 39
ALA HB1 H N N 40
ALA HB2 H N N 41
ALA HB3 H N N 42
ALA HXT H N N 43
ARG N N N N 44
ARG CA C N S 45
ARG C C N N 46
ARG O O N N 47
ARG CB C N N 48
ARG CG C N N 49
ARG CD C N N 50
ARG NE N N N 51
ARG CZ C N N 52
ARG NH1 N N N 53
ARG NH2 N N N 54
ARG OXT O N N 55
ARG H H N N 56
ARG H2 H N N 57
ARG HA H N N 58
ARG HB2 H N N 59
ARG HB3 H N N 60
ARG HG2 H N N 61
ARG HG3 H N N 62
ARG HD2 H N N 63
ARG HD3 H N N 64
ARG HE H N N 65
ARG HH11 H N N 66
ARG HH12 H N N 67
ARG HH21 H N N 68
ARG HH22 H N N 69
ARG HXT H N N 70
ASN N N N N 71
ASN CA C N S 72
ASN C C N N 73
ASN O O N N 74
ASN CB C N N 75
ASN CG C N N 76
ASN OD1 O N N 77
ASN ND2 N N N 78
ASN OXT O N N 79
ASN H H N N 80
ASN H2 H N N 81
ASN HA H N N 82
ASN HB2 H N N 83
ASN HB3 H N N 84
ASN HD21 H N N 85
ASN HD22 H N N 86
ASN HXT H N N 87
ASP N N N N 88
ASP CA C N S 89
ASP C C N N 90
ASP O O N N 91
ASP CB C N N 92
ASP CG C N N 93
ASP OD1 O N N 94
ASP OD2 O N N 95
ASP OXT O N N 96
ASP H H N N 97
ASP H2 H N N 98
ASP HA H N N 99
ASP HB2 H N N 100
ASP HB3 H N N 101
ASP HD2 H N N 102
ASP HXT H N N 103
BTB C1 C N N 104
BTB O1 O N N 105
BTB C2 C N N 106
BTB C3 C N N 107
BTB O3 O N N 108
BTB C4 C N N 109
BTB O4 O N N 110
BTB N N N N 111
BTB C5 C N N 112
BTB C6 C N N 113
BTB O6 O N N 114
BTB C7 C N N 115
BTB C8 C N N 116
BTB O8 O N N 117
BTB H11 H N N 118
BTB H12 H N N 119
BTB HO1 H N N 120
BTB H31 H N N 121
BTB H32 H N N 122
BTB HO3 H N N 123
BTB H41 H N N 124
BTB H42 H N N 125
BTB HO4 H N N 126
BTB H51 H N N 127
BTB H52 H N N 128
BTB H61 H N N 129
BTB H62 H N N 130
BTB HO6 H N N 131
BTB H71 H N N 132
BTB H72 H N N 133
BTB H81 H N N 134
BTB H82 H N N 135
BTB HO8 H N N 136
GAL C1 C N R 137
GAL C2 C N R 138
GAL C3 C N S 139
GAL C4 C N R 140
GAL C5 C N R 141
GAL C6 C N N 142
GAL O1 O N N 143
GAL O2 O N N 144
GAL O3 O N N 145
GAL O4 O N N 146
GAL O5 O N N 147
GAL O6 O N N 148
GAL H1 H N N 149
GAL H2 H N N 150
GAL H3 H N N 151
GAL H4 H N N 152
GAL H5 H N N 153
GAL H61 H N N 154
GAL H62 H N N 155
GAL HO1 H N N 156
GAL HO2 H N N 157
GAL HO3 H N N 158
GAL HO4 H N N 159
GAL HO6 H N N 160
GLN N N N N 161
GLN CA C N S 162
GLN C C N N 163
GLN O O N N 164
GLN CB C N N 165
GLN CG C N N 166
GLN CD C N N 167
GLN OE1 O N N 168
GLN NE2 N N N 169
GLN OXT O N N 170
GLN H H N N 171
GLN H2 H N N 172
GLN HA H N N 173
GLN HB2 H N N 174
GLN HB3 H N N 175
GLN HG2 H N N 176
GLN HG3 H N N 177
GLN HE21 H N N 178
GLN HE22 H N N 179
GLN HXT H N N 180
GLU N N N N 181
GLU CA C N S 182
GLU C C N N 183
GLU O O N N 184
GLU CB C N N 185
GLU CG C N N 186
GLU CD C N N 187
GLU OE1 O N N 188
GLU OE2 O N N 189
GLU OXT O N N 190
GLU H H N N 191
GLU H2 H N N 192
GLU HA H N N 193
GLU HB2 H N N 194
GLU HB3 H N N 195
GLU HG2 H N N 196
GLU HG3 H N N 197
GLU HE2 H N N 198
GLU HXT H N N 199
GLY N N N N 200
GLY CA C N N 201
GLY C C N N 202
GLY O O N N 203
GLY OXT O N N 204
GLY H H N N 205
GLY H2 H N N 206
GLY HA2 H N N 207
GLY HA3 H N N 208
GLY HXT H N N 209
HIS N N N N 210
HIS CA C N S 211
HIS C C N N 212
HIS O O N N 213
HIS CB C N N 214
HIS CG C Y N 215
HIS ND1 N Y N 216
HIS CD2 C Y N 217
HIS CE1 C Y N 218
HIS NE2 N Y N 219
HIS OXT O N N 220
HIS H H N N 221
HIS H2 H N N 222
HIS HA H N N 223
HIS HB2 H N N 224
HIS HB3 H N N 225
HIS HD1 H N N 226
HIS HD2 H N N 227
HIS HE1 H N N 228
HIS HE2 H N N 229
HIS HXT H N N 230
HOH O O N N 231
HOH H1 H N N 232
HOH H2 H N N 233
ILE N N N N 234
ILE CA C N S 235
ILE C C N N 236
ILE O O N N 237
ILE CB C N S 238
ILE CG1 C N N 239
ILE CG2 C N N 240
ILE CD1 C N N 241
ILE OXT O N N 242
ILE H H N N 243
ILE H2 H N N 244
ILE HA H N N 245
ILE HB H N N 246
ILE HG12 H N N 247
ILE HG13 H N N 248
ILE HG21 H N N 249
ILE HG22 H N N 250
ILE HG23 H N N 251
ILE HD11 H N N 252
ILE HD12 H N N 253
ILE HD13 H N N 254
ILE HXT H N N 255
LEU N N N N 256
LEU CA C N S 257
LEU C C N N 258
LEU O O N N 259
LEU CB C N N 260
LEU CG C N N 261
LEU CD1 C N N 262
LEU CD2 C N N 263
LEU OXT O N N 264
LEU H H N N 265
LEU H2 H N N 266
LEU HA H N N 267
LEU HB2 H N N 268
LEU HB3 H N N 269
LEU HG H N N 270
LEU HD11 H N N 271
LEU HD12 H N N 272
LEU HD13 H N N 273
LEU HD21 H N N 274
LEU HD22 H N N 275
LEU HD23 H N N 276
LEU HXT H N N 277
LYS N N N N 278
LYS CA C N S 279
LYS C C N N 280
LYS O O N N 281
LYS CB C N N 282
LYS CG C N N 283
LYS CD C N N 284
LYS CE C N N 285
LYS NZ N N N 286
LYS OXT O N N 287
LYS H H N N 288
LYS H2 H N N 289
LYS HA H N N 290
LYS HB2 H N N 291
LYS HB3 H N N 292
LYS HG2 H N N 293
LYS HG3 H N N 294
LYS HD2 H N N 295
LYS HD3 H N N 296
LYS HE2 H N N 297
LYS HE3 H N N 298
LYS HZ1 H N N 299
LYS HZ2 H N N 300
LYS HZ3 H N N 301
LYS HXT H N N 302
MET N N N N 303
MET CA C N S 304
MET C C N N 305
MET O O N N 306
MET CB C N N 307
MET CG C N N 308
MET SD S N N 309
MET CE C N N 310
MET OXT O N N 311
MET H H N N 312
MET H2 H N N 313
MET HA H N N 314
MET HB2 H N N 315
MET HB3 H N N 316
MET HG2 H N N 317
MET HG3 H N N 318
MET HE1 H N N 319
MET HE2 H N N 320
MET HE3 H N N 321
MET HXT H N N 322
NPO C1 C Y N 323
NPO C2 C Y N 324
NPO C3 C Y N 325
NPO C4 C Y N 326
NPO C5 C Y N 327
NPO C6 C Y N 328
NPO OH O N N 329
NPO N1 N N N 330
NPO O2 O N N 331
NPO O3 O N N 332
NPO H2 H N N 333
NPO H3 H N N 334
NPO H5 H N N 335
NPO H6 H N N 336
NPO HO H N N 337
PHE N N N N 338
PHE CA C N S 339
PHE C C N N 340
PHE O O N N 341
PHE CB C N N 342
PHE CG C Y N 343
PHE CD1 C Y N 344
PHE CD2 C Y N 345
PHE CE1 C Y N 346
PHE CE2 C Y N 347
PHE CZ C Y N 348
PHE OXT O N N 349
PHE H H N N 350
PHE H2 H N N 351
PHE HA H N N 352
PHE HB2 H N N 353
PHE HB3 H N N 354
PHE HD1 H N N 355
PHE HD2 H N N 356
PHE HE1 H N N 357
PHE HE2 H N N 358
PHE HZ H N N 359
PHE HXT H N N 360
PRO N N N N 361
PRO CA C N S 362
PRO C C N N 363
PRO O O N N 364
PRO CB C N N 365
PRO CG C N N 366
PRO CD C N N 367
PRO OXT O N N 368
PRO H H N N 369
PRO HA H N N 370
PRO HB2 H N N 371
PRO HB3 H N N 372
PRO HG2 H N N 373
PRO HG3 H N N 374
PRO HD2 H N N 375
PRO HD3 H N N 376
PRO HXT H N N 377
SER N N N N 378
SER CA C N S 379
SER C C N N 380
SER O O N N 381
SER CB C N N 382
SER OG O N N 383
SER OXT O N N 384
SER H H N N 385
SER H2 H N N 386
SER HA H N N 387
SER HB2 H N N 388
SER HB3 H N N 389
SER HG H N N 390
SER HXT H N N 391
THR N N N N 392
THR CA C N S 393
THR C C N N 394
THR O O N N 395
THR CB C N R 396
THR OG1 O N N 397
THR CG2 C N N 398
THR OXT O N N 399
THR H H N N 400
THR H2 H N N 401
THR HA H N N 402
THR HB H N N 403
THR HG1 H N N 404
THR HG21 H N N 405
THR HG22 H N N 406
THR HG23 H N N 407
THR HXT H N N 408
TRP N N N N 409
TRP CA C N S 410
TRP C C N N 411
TRP O O N N 412
TRP CB C N N 413
TRP CG C Y N 414
TRP CD1 C Y N 415
TRP CD2 C Y N 416
TRP NE1 N Y N 417
TRP CE2 C Y N 418
TRP CE3 C Y N 419
TRP CZ2 C Y N 420
TRP CZ3 C Y N 421
TRP CH2 C Y N 422
TRP OXT O N N 423
TRP H H N N 424
TRP H2 H N N 425
TRP HA H N N 426
TRP HB2 H N N 427
TRP HB3 H N N 428
TRP HD1 H N N 429
TRP HE1 H N N 430
TRP HE3 H N N 431
TRP HZ2 H N N 432
TRP HZ3 H N N 433
TRP HH2 H N N 434
TRP HXT H N N 435
TYR N N N N 436
TYR CA C N S 437
TYR C C N N 438
TYR O O N N 439
TYR CB C N N 440
TYR CG C Y N 441
TYR CD1 C Y N 442
TYR CD2 C Y N 443
TYR CE1 C Y N 444
TYR CE2 C Y N 445
TYR CZ C Y N 446
TYR OH O N N 447
TYR OXT O N N 448
TYR H H N N 449
TYR H2 H N N 450
TYR HA H N N 451
TYR HB2 H N N 452
TYR HB3 H N N 453
TYR HD1 H N N 454
TYR HD2 H N N 455
TYR HE1 H N N 456
TYR HE2 H N N 457
TYR HH H N N 458
TYR HXT H N N 459
VAL N N N N 460
VAL CA C N S 461
VAL C C N N 462
VAL O O N N 463
VAL CB C N N 464
VAL CG1 C N N 465
VAL CG2 C N N 466
VAL OXT O N N 467
VAL H H N N 468
VAL H2 H N N 469
VAL HA H N N 470
VAL HB H N N 471
VAL HG11 H N N 472
VAL HG12 H N N 473
VAL HG13 H N N 474
VAL HG21 H N N 475
VAL HG22 H N N 476
VAL HG23 H N N 477
VAL HXT H N N 478
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
A2G O5 C5 sing N N 1
A2G C1 O5 sing N N 2
A2G C1 C2 sing N N 3
A2G C1 H1 sing N N 4
A2G O1 C1 sing N N 5
A2G O1 HO1 sing N N 6
A2G C2 C3 sing N N 7
A2G C2 H2 sing N N 8
A2G N2 C2 sing N N 9
A2G N2 HN2 sing N N 10
A2G C3 C4 sing N N 11
A2G C3 O3 sing N N 12
A2G C3 H3 sing N N 13
A2G O3 HO3 sing N N 14
A2G C4 O4 sing N N 15
A2G C4 H4 sing N N 16
A2G O4 HO4 sing N N 17
A2G C5 C4 sing N N 18
A2G C5 C6 sing N N 19
A2G C5 H5 sing N N 20
A2G C6 O6 sing N N 21
A2G C6 H61 sing N N 22
A2G C7 N2 sing N N 23
A2G O7 C7 doub N N 24
A2G C8 C7 sing N N 25
A2G C8 H81 sing N N 26
A2G C8 H82 sing N N 27
A2G C8 H83 sing N N 28
A2G C6 H62 sing N N 29
A2G O6 HO6 sing N N 30
ALA N CA sing N N 31
ALA N H sing N N 32
ALA N H2 sing N N 33
ALA CA C sing N N 34
ALA CA CB sing N N 35
ALA CA HA sing N N 36
ALA C O doub N N 37
ALA C OXT sing N N 38
ALA CB HB1 sing N N 39
ALA CB HB2 sing N N 40
ALA CB HB3 sing N N 41
ALA OXT HXT sing N N 42
ARG N CA sing N N 43
ARG N H sing N N 44
ARG N H2 sing N N 45
ARG CA C sing N N 46
ARG CA CB sing N N 47
ARG CA HA sing N N 48
ARG C O doub N N 49
ARG C OXT sing N N 50
ARG CB CG sing N N 51
ARG CB HB2 sing N N 52
ARG CB HB3 sing N N 53
ARG CG CD sing N N 54
ARG CG HG2 sing N N 55
ARG CG HG3 sing N N 56
ARG CD NE sing N N 57
ARG CD HD2 sing N N 58
ARG CD HD3 sing N N 59
ARG NE CZ sing N N 60
ARG NE HE sing N N 61
ARG CZ NH1 sing N N 62
ARG CZ NH2 doub N N 63
ARG NH1 HH11 sing N N 64
ARG NH1 HH12 sing N N 65
ARG NH2 HH21 sing N N 66
ARG NH2 HH22 sing N N 67
ARG OXT HXT sing N N 68
ASN N CA sing N N 69
ASN N H sing N N 70
ASN N H2 sing N N 71
ASN CA C sing N N 72
ASN CA CB sing N N 73
ASN CA HA sing N N 74
ASN C O doub N N 75
ASN C OXT sing N N 76
ASN CB CG sing N N 77
ASN CB HB2 sing N N 78
ASN CB HB3 sing N N 79
ASN CG OD1 doub N N 80
ASN CG ND2 sing N N 81
ASN ND2 HD21 sing N N 82
ASN ND2 HD22 sing N N 83
ASN OXT HXT sing N N 84
ASP N CA sing N N 85
ASP N H sing N N 86
ASP N H2 sing N N 87
ASP CA C sing N N 88
ASP CA CB sing N N 89
ASP CA HA sing N N 90
ASP C O doub N N 91
ASP C OXT sing N N 92
ASP CB CG sing N N 93
ASP CB HB2 sing N N 94
ASP CB HB3 sing N N 95
ASP CG OD1 doub N N 96
ASP CG OD2 sing N N 97
ASP OD2 HD2 sing N N 98
ASP OXT HXT sing N N 99
BTB C1 O1 sing N N 100
BTB C1 C2 sing N N 101
BTB C1 H11 sing N N 102
BTB C1 H12 sing N N 103
BTB O1 HO1 sing N N 104
BTB C2 C3 sing N N 105
BTB C2 C4 sing N N 106
BTB C2 N sing N N 107
BTB C3 O3 sing N N 108
BTB C3 H31 sing N N 109
BTB C3 H32 sing N N 110
BTB O3 HO3 sing N N 111
BTB C4 O4 sing N N 112
BTB C4 H41 sing N N 113
BTB C4 H42 sing N N 114
BTB O4 HO4 sing N N 115
BTB N C5 sing N N 116
BTB N C7 sing N N 117
BTB C5 C6 sing N N 118
BTB C5 H51 sing N N 119
BTB C5 H52 sing N N 120
BTB C6 O6 sing N N 121
BTB C6 H61 sing N N 122
BTB C6 H62 sing N N 123
BTB O6 HO6 sing N N 124
BTB C7 C8 sing N N 125
BTB C7 H71 sing N N 126
BTB C7 H72 sing N N 127
BTB C8 O8 sing N N 128
BTB C8 H81 sing N N 129
BTB C8 H82 sing N N 130
BTB O8 HO8 sing N N 131
GAL C1 C2 sing N N 132
GAL C1 O1 sing N N 133
GAL C1 O5 sing N N 134
GAL C1 H1 sing N N 135
GAL C2 C3 sing N N 136
GAL C2 O2 sing N N 137
GAL C2 H2 sing N N 138
GAL C3 C4 sing N N 139
GAL C3 O3 sing N N 140
GAL C3 H3 sing N N 141
GAL C4 C5 sing N N 142
GAL C4 O4 sing N N 143
GAL C4 H4 sing N N 144
GAL C5 C6 sing N N 145
GAL C5 O5 sing N N 146
GAL C5 H5 sing N N 147
GAL C6 O6 sing N N 148
GAL C6 H61 sing N N 149
GAL C6 H62 sing N N 150
GAL O1 HO1 sing N N 151
GAL O2 HO2 sing N N 152
GAL O3 HO3 sing N N 153
GAL O4 HO4 sing N N 154
GAL O6 HO6 sing N N 155
GLN N CA sing N N 156
GLN N H sing N N 157
GLN N H2 sing N N 158
GLN CA C sing N N 159
GLN CA CB sing N N 160
GLN CA HA sing N N 161
GLN C O doub N N 162
GLN C OXT sing N N 163
GLN CB CG sing N N 164
GLN CB HB2 sing N N 165
GLN CB HB3 sing N N 166
GLN CG CD sing N N 167
GLN CG HG2 sing N N 168
GLN CG HG3 sing N N 169
GLN CD OE1 doub N N 170
GLN CD NE2 sing N N 171
GLN NE2 HE21 sing N N 172
GLN NE2 HE22 sing N N 173
GLN OXT HXT sing N N 174
GLU N CA sing N N 175
GLU N H sing N N 176
GLU N H2 sing N N 177
GLU CA C sing N N 178
GLU CA CB sing N N 179
GLU CA HA sing N N 180
GLU C O doub N N 181
GLU C OXT sing N N 182
GLU CB CG sing N N 183
GLU CB HB2 sing N N 184
GLU CB HB3 sing N N 185
GLU CG CD sing N N 186
GLU CG HG2 sing N N 187
GLU CG HG3 sing N N 188
GLU CD OE1 doub N N 189
GLU CD OE2 sing N N 190
GLU OE2 HE2 sing N N 191
GLU OXT HXT sing N N 192
GLY N CA sing N N 193
GLY N H sing N N 194
GLY N H2 sing N N 195
GLY CA C sing N N 196
GLY CA HA2 sing N N 197
GLY CA HA3 sing N N 198
GLY C O doub N N 199
GLY C OXT sing N N 200
GLY OXT HXT sing N N 201
HIS N CA sing N N 202
HIS N H sing N N 203
HIS N H2 sing N N 204
HIS CA C sing N N 205
HIS CA CB sing N N 206
HIS CA HA sing N N 207
HIS C O doub N N 208
HIS C OXT sing N N 209
HIS CB CG sing N N 210
HIS CB HB2 sing N N 211
HIS CB HB3 sing N N 212
HIS CG ND1 sing Y N 213
HIS CG CD2 doub Y N 214
HIS ND1 CE1 doub Y N 215
HIS ND1 HD1 sing N N 216
HIS CD2 NE2 sing Y N 217
HIS CD2 HD2 sing N N 218
HIS CE1 NE2 sing Y N 219
HIS CE1 HE1 sing N N 220
HIS NE2 HE2 sing N N 221
HIS OXT HXT sing N N 222
HOH O H1 sing N N 223
HOH O H2 sing N N 224
ILE N CA sing N N 225
ILE N H sing N N 226
ILE N H2 sing N N 227
ILE CA C sing N N 228
ILE CA CB sing N N 229
ILE CA HA sing N N 230
ILE C O doub N N 231
ILE C OXT sing N N 232
ILE CB CG1 sing N N 233
ILE CB CG2 sing N N 234
ILE CB HB sing N N 235
ILE CG1 CD1 sing N N 236
ILE CG1 HG12 sing N N 237
ILE CG1 HG13 sing N N 238
ILE CG2 HG21 sing N N 239
ILE CG2 HG22 sing N N 240
ILE CG2 HG23 sing N N 241
ILE CD1 HD11 sing N N 242
ILE CD1 HD12 sing N N 243
ILE CD1 HD13 sing N N 244
ILE OXT HXT sing N N 245
LEU N CA sing N N 246
LEU N H sing N N 247
LEU N H2 sing N N 248
LEU CA C sing N N 249
LEU CA CB sing N N 250
LEU CA HA sing N N 251
LEU C O doub N N 252
LEU C OXT sing N N 253
LEU CB CG sing N N 254
LEU CB HB2 sing N N 255
LEU CB HB3 sing N N 256
LEU CG CD1 sing N N 257
LEU CG CD2 sing N N 258
LEU CG HG sing N N 259
LEU CD1 HD11 sing N N 260
LEU CD1 HD12 sing N N 261
LEU CD1 HD13 sing N N 262
LEU CD2 HD21 sing N N 263
LEU CD2 HD22 sing N N 264
LEU CD2 HD23 sing N N 265
LEU OXT HXT sing N N 266
LYS N CA sing N N 267
LYS N H sing N N 268
LYS N H2 sing N N 269
LYS CA C sing N N 270
LYS CA CB sing N N 271
LYS CA HA sing N N 272
LYS C O doub N N 273
LYS C OXT sing N N 274
LYS CB CG sing N N 275
LYS CB HB2 sing N N 276
LYS CB HB3 sing N N 277
LYS CG CD sing N N 278
LYS CG HG2 sing N N 279
LYS CG HG3 sing N N 280
LYS CD CE sing N N 281
LYS CD HD2 sing N N 282
LYS CD HD3 sing N N 283
LYS CE NZ sing N N 284
LYS CE HE2 sing N N 285
LYS CE HE3 sing N N 286
LYS NZ HZ1 sing N N 287
LYS NZ HZ2 sing N N 288
LYS NZ HZ3 sing N N 289
LYS OXT HXT sing N N 290
MET N CA sing N N 291
MET N H sing N N 292
MET N H2 sing N N 293
MET CA C sing N N 294
MET CA CB sing N N 295
MET CA HA sing N N 296
MET C O doub N N 297
MET C OXT sing N N 298
MET CB CG sing N N 299
MET CB HB2 sing N N 300
MET CB HB3 sing N N 301
MET CG SD sing N N 302
MET CG HG2 sing N N 303
MET CG HG3 sing N N 304
MET SD CE sing N N 305
MET CE HE1 sing N N 306
MET CE HE2 sing N N 307
MET CE HE3 sing N N 308
MET OXT HXT sing N N 309
NPO C1 C2 doub Y N 310
NPO C1 C6 sing Y N 311
NPO C1 N1 sing N N 312
NPO C2 C3 sing Y N 313
NPO C2 H2 sing N N 314
NPO C3 C4 doub Y N 315
NPO C3 H3 sing N N 316
NPO C4 C5 sing Y N 317
NPO C4 OH sing N N 318
NPO C5 C6 doub Y N 319
NPO C5 H5 sing N N 320
NPO C6 H6 sing N N 321
NPO OH HO sing N N 322
NPO N1 O2 sing N N 323
NPO N1 O3 doub N N 324
PHE N CA sing N N 325
PHE N H sing N N 326
PHE N H2 sing N N 327
PHE CA C sing N N 328
PHE CA CB sing N N 329
PHE CA HA sing N N 330
PHE C O doub N N 331
PHE C OXT sing N N 332
PHE CB CG sing N N 333
PHE CB HB2 sing N N 334
PHE CB HB3 sing N N 335
PHE CG CD1 doub Y N 336
PHE CG CD2 sing Y N 337
PHE CD1 CE1 sing Y N 338
PHE CD1 HD1 sing N N 339
PHE CD2 CE2 doub Y N 340
PHE CD2 HD2 sing N N 341
PHE CE1 CZ doub Y N 342
PHE CE1 HE1 sing N N 343
PHE CE2 CZ sing Y N 344
PHE CE2 HE2 sing N N 345
PHE CZ HZ sing N N 346
PHE OXT HXT sing N N 347
PRO N CA sing N N 348
PRO N CD sing N N 349
PRO N H sing N N 350
PRO CA C sing N N 351
PRO CA CB sing N N 352
PRO CA HA sing N N 353
PRO C O doub N N 354
PRO C OXT sing N N 355
PRO CB CG sing N N 356
PRO CB HB2 sing N N 357
PRO CB HB3 sing N N 358
PRO CG CD sing N N 359
PRO CG HG2 sing N N 360
PRO CG HG3 sing N N 361
PRO CD HD2 sing N N 362
PRO CD HD3 sing N N 363
PRO OXT HXT sing N N 364
SER N CA sing N N 365
SER N H sing N N 366
SER N H2 sing N N 367
SER CA C sing N N 368
SER CA CB sing N N 369
SER CA HA sing N N 370
SER C O doub N N 371
SER C OXT sing N N 372
SER CB OG sing N N 373
SER CB HB2 sing N N 374
SER CB HB3 sing N N 375
SER OG HG sing N N 376
SER OXT HXT sing N N 377
THR N CA sing N N 378
THR N H sing N N 379
THR N H2 sing N N 380
THR CA C sing N N 381
THR CA CB sing N N 382
THR CA HA sing N N 383
THR C O doub N N 384
THR C OXT sing N N 385
THR CB OG1 sing N N 386
THR CB CG2 sing N N 387
THR CB HB sing N N 388
THR OG1 HG1 sing N N 389
THR CG2 HG21 sing N N 390
THR CG2 HG22 sing N N 391
THR CG2 HG23 sing N N 392
THR OXT HXT sing N N 393
TRP N CA sing N N 394
TRP N H sing N N 395
TRP N H2 sing N N 396
TRP CA C sing N N 397
TRP CA CB sing N N 398
TRP CA HA sing N N 399
TRP C O doub N N 400
TRP C OXT sing N N 401
TRP CB CG sing N N 402
TRP CB HB2 sing N N 403
TRP CB HB3 sing N N 404
TRP CG CD1 doub Y N 405
TRP CG CD2 sing Y N 406
TRP CD1 NE1 sing Y N 407
TRP CD1 HD1 sing N N 408
TRP CD2 CE2 doub Y N 409
TRP CD2 CE3 sing Y N 410
TRP NE1 CE2 sing Y N 411
TRP NE1 HE1 sing N N 412
TRP CE2 CZ2 sing Y N 413
TRP CE3 CZ3 doub Y N 414
TRP CE3 HE3 sing N N 415
TRP CZ2 CH2 doub Y N 416
TRP CZ2 HZ2 sing N N 417
TRP CZ3 CH2 sing Y N 418
TRP CZ3 HZ3 sing N N 419
TRP CH2 HH2 sing N N 420
TRP OXT HXT sing N N 421
TYR N CA sing N N 422
TYR N H sing N N 423
TYR N H2 sing N N 424
TYR CA C sing N N 425
TYR CA CB sing N N 426
TYR CA HA sing N N 427
TYR C O doub N N 428
TYR C OXT sing N N 429
TYR CB CG sing N N 430
TYR CB HB2 sing N N 431
TYR CB HB3 sing N N 432
TYR CG CD1 doub Y N 433
TYR CG CD2 sing Y N 434
TYR CD1 CE1 sing Y N 435
TYR CD1 HD1 sing N N 436
TYR CD2 CE2 doub Y N 437
TYR CD2 HD2 sing N N 438
TYR CE1 CZ doub Y N 439
TYR CE1 HE1 sing N N 440
TYR CE2 CZ sing Y N 441
TYR CE2 HE2 sing N N 442
TYR CZ OH sing N N 443
TYR OH HH sing N N 444
TYR OXT HXT sing N N 445
VAL N CA sing N N 446
VAL N H sing N N 447
VAL N H2 sing N N 448
VAL CA C sing N N 449
VAL CA CB sing N N 450
VAL CA HA sing N N 451
VAL C O doub N N 452
VAL C OXT sing N N 453
VAL CB CG1 sing N N 454
VAL CB CG2 sing N N 455
VAL CB HB sing N N 456
VAL CG1 HG11 sing N N 457
VAL CG1 HG12 sing N N 458
VAL CG1 HG13 sing N N 459
VAL CG2 HG21 sing N N 460
VAL CG2 HG22 sing N N 461
VAL CG2 HG23 sing N N 462
VAL OXT HXT sing N N 463
#
loop_
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_mon_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.hetero
B 2 A2G 1 B A2G 1 C A2G 241 n
B 2 GAL 2 B GAL 2 C GAL 240 n
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
A2G 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpNAca
A2G 'COMMON NAME' GMML 1.0 N-acetyl-a-D-galactopyranosamine
A2G 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-GalpNAc
A2G 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GalNAc
GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb
GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose
GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp
GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal
#
_pdbx_entity_branch.entity_id 2
_pdbx_entity_branch.type oligosaccharide
#
loop_
_pdbx_entity_branch_descriptor.ordinal
_pdbx_entity_branch_descriptor.entity_id
_pdbx_entity_branch_descriptor.descriptor
_pdbx_entity_branch_descriptor.type
_pdbx_entity_branch_descriptor.program
_pdbx_entity_branch_descriptor.program_version
1 2 DGalpb1-3DGalpNAca1-ROH 'Glycam Condensed Sequence' GMML 1.0
2 2 'WURCS=2.0/2,2,1/[a2112h-1a_1-5_2*NCC/3=O][a2112h-1b_1-5]/1-2/a3-b1' WURCS PDB2Glycan 1.1.0
3 2 '[][D-1-deoxy-GalpNAc]{[(3+1)][b-D-Galp]{}}' LINUCS PDB-CARE ?
#
_pdbx_entity_branch_link.link_id 1
_pdbx_entity_branch_link.entity_id 2
_pdbx_entity_branch_link.entity_branch_list_num_1 2
_pdbx_entity_branch_link.comp_id_1 GAL
_pdbx_entity_branch_link.atom_id_1 C1
_pdbx_entity_branch_link.leaving_atom_id_1 O1
_pdbx_entity_branch_link.entity_branch_list_num_2 1
_pdbx_entity_branch_link.comp_id_2 A2G
_pdbx_entity_branch_link.atom_id_2 O3
_pdbx_entity_branch_link.leaving_atom_id_2 HO3
_pdbx_entity_branch_link.value_order sing
_pdbx_entity_branch_link.details ?
#
loop_
_pdbx_entity_branch_list.entity_id
_pdbx_entity_branch_list.comp_id
_pdbx_entity_branch_list.num
_pdbx_entity_branch_list.hetero
2 A2G 1 n
2 GAL 2 n
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
3 P-NITROPHENOL NPO
4 '2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL' BTB
5 water HOH
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 2ZGL
_pdbx_initial_refinement_model.details ?
#