HEADER TRANSFERASE 11-MAR-10 3M4J TITLE CRYSTAL STRUCTURE OF N-ACETYL-L-ORNITHINE TRANSCARBAMYLASE COMPLEXED TITLE 2 WITH PALAO COMPND MOL_ID: 1; COMPND 2 MOLECULE: N-ACETYLORNITHINE CARBAMOYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: AOTCASE; COMPND 5 EC: 2.1.3.9; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: XANTHOMONAS CAMPESTRIS PV. CAMPESTRIS; SOURCE 3 ORGANISM_TAXID: 340; SOURCE 4 GENE: ARGF, ARGF', XCC2249; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS TRANSCARBAMYLASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.LI,X.YU,N.M.ALLEWELL,M.TUCHMAN,D.SHI REVDAT 5 22-NOV-23 3M4J 1 REMARK REVDAT 4 06-SEP-23 3M4J 1 REMARK SEQADV LINK REVDAT 3 08-NOV-17 3M4J 1 REMARK REVDAT 2 25-AUG-10 3M4J 1 JRNL REVDAT 1 28-JUL-10 3M4J 0 JRNL AUTH Y.LI,X.YU,J.HO,D.FUSHMAN,N.M.ALLEWELL,M.TUCHMAN,D.SHI JRNL TITL REVERSIBLE POST-TRANSLATIONAL CARBOXYLATION MODULATES THE JRNL TITL 2 ENZYMATIC ACTIVITY OF N-ACETYL-L-ORNITHINE TRANSCARBAMYLASE. JRNL REF BIOCHEMISTRY V. 49 6887 2010 JRNL REFN ISSN 0006-2960 JRNL PMID 20695527 JRNL DOI 10.1021/BI1007386 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.76 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 5215844.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 18189 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1797 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.34 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2673 REMARK 3 BIN R VALUE (WORKING SET) : 0.2240 REMARK 3 BIN FREE R VALUE : 0.3030 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.80 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 323 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.017 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2619 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 24 REMARK 3 SOLVENT ATOMS : 90 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.69 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.25 REMARK 3 ESD FROM SIGMAA (A) : 0.16 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.32 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.25 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.40 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.000 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.220 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.880 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.890 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.620 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.37 REMARK 3 BSOL : 46.10 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : LIGAND.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : LIGAND.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3M4J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-APR-10. REMARK 100 THE DEPOSITION ID IS D_1000058098. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-DEC-04 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : F1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9186 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD DETECTOR REMARK 200 DETECTOR MANUFACTURER : DUAL QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18269 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 12.00 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 11.80 REMARK 200 R MERGE FOR SHELL (I) : 0.48400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 3KZO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: LITHIUM SULFATE, BIS-TRIS, PEG3350, PH REMARK 280 6.0, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y,-Z REMARK 290 16555 X,-Y,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z,-X,-Y+1/2 REMARK 290 19555 -Z,-X+1/2,Y REMARK 290 20555 -Z+1/2,X,-Y REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z,-X REMARK 290 23555 Y,-Z,-X+1/2 REMARK 290 24555 -Y,-Z+1/2,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 64.44000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.44000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 64.44000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.44000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 64.44000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 64.44000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 64.44000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 64.44000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 64.44000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 64.44000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 64.44000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 64.44000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 64.44000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 64.44000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 64.44000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 64.44000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 64.44000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 64.44000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 64.44000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 64.44000 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 64.44000 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 64.44000 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 64.44000 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 64.44000 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 64.44000 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 64.44000 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 64.44000 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 64.44000 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 64.44000 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 64.44000 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 64.44000 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 64.44000 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 64.44000 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 64.44000 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 64.44000 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 64.44000 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32610 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -94.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 -1.000000 193.32000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 128.88000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 64.44000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 128.88000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 -64.44000 REMARK 350 BIOMT3 3 -1.000000 0.000000 0.000000 193.32000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 A 350 LIES ON A SPECIAL POSITION. REMARK 375 O2 SO4 A 350 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLY A 335 REMARK 465 GLN A 336 REMARK 465 SER A 337 REMARK 465 ARG A 338 REMARK 465 PRO A 339 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 125 OE2 GLU A 125 15656 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 49 143.99 -172.39 REMARK 500 MET A 50 -57.01 -123.38 REMARK 500 GLU A 144 112.95 103.38 REMARK 500 THR A 145 -89.34 -126.76 REMARK 500 GLN A 274 3.71 -67.22 REMARK 500 LEU A 295 151.59 69.55 REMARK 500 VAL A 301 -51.88 -128.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PA9 A 345 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 350 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3KZO RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH CARBAMYL PHOSPHATE AND N-ACETYL-L- REMARK 900 NORVALINE REMARK 900 RELATED ID: 3KZK RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH SULFATE AND N-ACETYL-L-CITRULLINE DBREF 3M4J A 1 339 UNP Q8P8J2 AOTC_XANCP 1 339 SEQADV 3M4J MET A -19 UNP Q8P8J2 EXPRESSION TAG SEQADV 3M4J GLY A -18 UNP Q8P8J2 EXPRESSION TAG SEQADV 3M4J SER A -17 UNP Q8P8J2 EXPRESSION TAG SEQADV 3M4J SER A -16 UNP Q8P8J2 EXPRESSION TAG SEQADV 3M4J HIS A -15 UNP Q8P8J2 EXPRESSION TAG SEQADV 3M4J HIS A -14 UNP Q8P8J2 EXPRESSION TAG SEQADV 3M4J HIS A -13 UNP Q8P8J2 EXPRESSION TAG SEQADV 3M4J HIS A -12 UNP Q8P8J2 EXPRESSION TAG SEQADV 3M4J HIS A -11 UNP Q8P8J2 EXPRESSION TAG SEQADV 3M4J HIS A -10 UNP Q8P8J2 EXPRESSION TAG SEQADV 3M4J SER A -9 UNP Q8P8J2 EXPRESSION TAG SEQADV 3M4J SER A -8 UNP Q8P8J2 EXPRESSION TAG SEQADV 3M4J GLY A -7 UNP Q8P8J2 EXPRESSION TAG SEQADV 3M4J LEU A -6 UNP Q8P8J2 EXPRESSION TAG SEQADV 3M4J VAL A -5 UNP Q8P8J2 EXPRESSION TAG SEQADV 3M4J PRO A -4 UNP Q8P8J2 EXPRESSION TAG SEQADV 3M4J ARG A -3 UNP Q8P8J2 EXPRESSION TAG SEQADV 3M4J GLY A -2 UNP Q8P8J2 EXPRESSION TAG SEQADV 3M4J SER A -1 UNP Q8P8J2 EXPRESSION TAG SEQADV 3M4J HIS A 0 UNP Q8P8J2 EXPRESSION TAG SEQRES 1 A 359 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 359 LEU VAL PRO ARG GLY SER HIS MET SER LEU LYS HIS PHE SEQRES 3 A 359 LEU ASN THR GLN ASP TRP SER ARG ALA GLU LEU ASP ALA SEQRES 4 A 359 LEU LEU THR GLN ALA ALA LEU PHE LYS ARG ASN LYS LEU SEQRES 5 A 359 GLY SER GLU LEU LYS GLY LYS SER ILE ALA LEU VAL PHE SEQRES 6 A 359 PHE ASN PRO SER MET ARG THR ARG THR SER PHE GLU LEU SEQRES 7 A 359 GLY ALA PHE GLN LEU GLY GLY HIS ALA VAL VAL LEU GLN SEQRES 8 A 359 PRO GLY LYS ASP ALA TRP PRO ILE GLU PHE ASN LEU GLY SEQRES 9 A 359 THR VAL MET ASP GLY ASP THR GLU GLU HIS ILE ALA GLU SEQRES 10 A 359 VAL ALA ARG VAL LEU GLY ARG TYR VAL ASP LEU ILE GLY SEQRES 11 A 359 VAL ARG ALA PHE PRO LYS PHE VAL ASP TRP SER LYS ASP SEQRES 12 A 359 ARG GLU ASP GLN VAL LEU LYS SER PHE ALA LYS TYR SER SEQRES 13 A 359 PRO VAL PRO VAL ILE ASN MET GLU THR ILE THR HIS PRO SEQRES 14 A 359 CYS GLN GLU LEU ALA HIS ALA LEU ALA LEU GLN GLU HIS SEQRES 15 A 359 PHE GLY THR PRO ASP LEU ARG GLY LYS LYS TYR VAL LEU SEQRES 16 A 359 THR TRP THR TYR HIS PRO LYS PRO LEU ASN THR ALA VAL SEQRES 17 A 359 ALA ASN SER ALA LEU THR ILE ALA THR ARG MET GLY MET SEQRES 18 A 359 ASP VAL THR LEU LEU CYS PRO THR PRO ASP TYR ILE LEU SEQRES 19 A 359 ASP GLU ARG TYR MET ASP TRP ALA ALA GLN ASN VAL ALA SEQRES 20 A 359 GLU SER GLY GLY SER LEU GLN VAL SER HIS ASP ILE ASP SEQRES 21 A 359 SER ALA TYR ALA GLY ALA ASP VAL VAL TYR ALA LYS SER SEQRES 22 A 359 TRP GLY ALA LEU PRO PHE PHE GLY ASN TRP GLU PRO GLU SEQRES 23 A 359 LYS PRO ILE ARG ASP GLN TYR GLN HIS PHE ILE VAL ASP SEQRES 24 A 359 GLU ARG LYS MET ALA LEU THR ASN ASN GLY VAL PHE SER SEQRES 25 A 359 HIS CYS LEU PRO LEU ARG ARG ASN VAL KCX ALA THR ASP SEQRES 26 A 359 ALA VAL MET ASP SER PRO ASN CYS ILE ALA ILE ASP GLU SEQRES 27 A 359 ALA GLU ASN ARG LEU HIS VAL GLN LYS ALA ILE MET ALA SEQRES 28 A 359 ALA LEU VAL GLY GLN SER ARG PRO MODRES 3M4J KCX A 302 LYS LYSINE NZ-CARBOXYLIC ACID HET KCX A 302 12 HET PA9 A 345 19 HET SO4 A 350 5 HETNAM KCX LYSINE NZ-CARBOXYLIC ACID HETNAM PA9 N~2~-ACETYL-N~5~-(PHOSPHONOACETYL)-L-ORNITHINE HETNAM SO4 SULFATE ION FORMUL 1 KCX C7 H14 N2 O4 FORMUL 2 PA9 C9 H17 N2 O7 P FORMUL 3 SO4 O4 S 2- FORMUL 4 HOH *90(H2 O) HELIX 1 1 ASN A 8 TRP A 12 5 5 HELIX 2 2 SER A 13 ASN A 30 1 18 HELIX 3 3 MET A 50 LEU A 63 1 14 HELIX 4 4 ILE A 95 VAL A 106 1 12 HELIX 5 5 ASP A 119 ARG A 124 1 6 HELIX 6 6 ASP A 126 SER A 136 1 11 HELIX 7 7 HIS A 148 GLY A 164 1 17 HELIX 8 8 THR A 186 MET A 199 1 14 HELIX 9 9 THR A 209 ILE A 213 5 5 HELIX 10 10 ASP A 215 GLY A 230 1 16 HELIX 11 11 ASP A 238 ALA A 244 1 7 HELIX 12 12 ALA A 256 PHE A 260 5 5 HELIX 13 13 GLU A 266 ASP A 271 1 6 HELIX 14 14 GLN A 272 ILE A 277 5 6 HELIX 15 15 ASP A 279 THR A 286 1 8 HELIX 16 16 THR A 304 SER A 310 1 7 HELIX 17 17 ILE A 314 VAL A 334 1 21 SHEET 1 A 4 HIS A 66 LEU A 70 0 SHEET 2 A 4 SER A 40 PHE A 45 1 N PHE A 45 O LEU A 70 SHEET 3 A 4 LEU A 108 ARG A 112 1 O GLY A 110 N VAL A 44 SHEET 4 A 4 VAL A 140 ASN A 142 1 O ILE A 141 N ILE A 109 SHEET 1 B 2 ILE A 79 GLU A 80 0 SHEET 2 B 2 GLU A 93 HIS A 94 1 O GLU A 93 N GLU A 80 SHEET 1 C 5 SER A 232 SER A 236 0 SHEET 2 C 5 ASP A 202 LEU A 206 1 N VAL A 203 O SER A 232 SHEET 3 C 5 LYS A 172 TRP A 177 1 N TYR A 173 O ASP A 202 SHEET 4 C 5 VAL A 248 LYS A 252 1 O VAL A 248 N VAL A 174 SHEET 5 C 5 VAL A 290 SER A 292 1 O VAL A 290 N VAL A 249 LINK C VAL A 301 N KCX A 302 1555 1555 1.33 LINK C KCX A 302 N ALA A 303 1555 1555 1.33 CISPEP 1 LEU A 295 PRO A 296 0 0.12 SITE 1 AC1 16 SER A 49 MET A 50 ARG A 51 THR A 52 SITE 2 AC1 16 TRP A 77 ARG A 112 GLU A 144 HIS A 148 SITE 3 AC1 16 LEU A 184 ASN A 185 LYS A 252 CYS A 294 SITE 4 AC1 16 LEU A 295 ARG A 322 HOH A 340 HOH A 342 SITE 1 AC2 3 PHE A 61 HIS A 66 HOH A 362 CRYST1 128.880 128.880 128.880 90.00 90.00 90.00 I 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007759 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007759 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007759 0.00000