data_3M7K # _entry.id 3M7K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3M7K pdb_00003m7k 10.2210/pdb3m7k/pdb NDB NA0497 ? ? RCSB RCSB058207 ? ? WWPDB D_1000058207 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-04-21 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2011-07-20 4 'Structure model' 1 3 2017-11-08 5 'Structure model' 1 4 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_struct_conn_angle 6 5 'Structure model' struct_conn 7 5 'Structure model' struct_ref_seq 8 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.contact_author' 3 4 'Structure model' '_software.contact_author_email' 4 4 'Structure model' '_software.date' 5 4 'Structure model' '_software.language' 6 4 'Structure model' '_software.location' 7 4 'Structure model' '_software.name' 8 4 'Structure model' '_software.type' 9 4 'Structure model' '_software.version' 10 5 'Structure model' '_database_2.pdbx_DOI' 11 5 'Structure model' '_database_2.pdbx_database_accession' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_alt_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 20 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 21 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 22 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 23 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 24 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 25 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 26 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 27 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 28 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 29 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_alt_id' 30 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 31 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 32 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 33 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 34 5 'Structure model' '_pdbx_struct_conn_angle.value' 35 5 'Structure model' '_struct_conn.pdbx_dist_value' 36 5 'Structure model' '_struct_conn.pdbx_ptnr1_label_alt_id' 37 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 38 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 39 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 40 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 41 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 42 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 43 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 44 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 45 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 46 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 47 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 48 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 49 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 50 5 'Structure model' '_struct_ref_seq.db_align_beg' 51 5 'Structure model' '_struct_ref_seq.db_align_end' 52 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 53 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 54 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 3M7K _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-03-16 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3LDY _pdbx_database_related.details 'the same protein-DNA complex, uncleaved' _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Shen, B.W.' 1 'Stoddard, B.L.' 2 # _citation.id primary _citation.title 'Unusual target site disruption by the rare-cutting HNH restriction endonuclease PacI.' _citation.journal_abbrev Structure _citation.journal_volume 18 _citation.page_first 734 _citation.page_last 743 _citation.year 2010 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20541511 _citation.pdbx_database_id_DOI 10.1016/j.str.2010.03.009 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Shen, B.W.' 1 ? primary 'Heiter, D.F.' 2 ? primary 'Chan, S.H.' 3 ? primary 'Wang, H.' 4 ? primary 'Xu, S.Y.' 5 ? primary 'Morgan, R.D.' 6 ? primary 'Wilson, G.G.' 7 ? primary 'Stoddard, B.L.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'restriction endonuclease PacI' 15784.817 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*GP*AP*GP*GP*CP*TP*TP*AP*AP*T)-3') ; 3084.040 1 ? ? ? 'top strand product of PacI' 3 polymer syn ;DNA (5'-D(P*TP*AP*AP*GP*CP*CP*TP*C)-3') ; 2386.593 1 ? ? ? 'bottom strand of PacI product' 4 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? 5 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 6 non-polymer syn 'PLATINUM (II) ION' 195.078 1 ? ? ? ? 7 non-polymer syn 'SODIUM ION' 22.990 9 ? ? ? ? 8 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 9 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 10 water nat water 18.015 114 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MTQCPRCQRNLAADEFYAGSSKMCKGCMTWQNLSYNANKEGHANTFTKATFLAWYGLSAQRHCGYCGISEAGFTSLHRTN PRGYHIQCLGVDRSDSFEGYSPQNARLACFICNRIKSNIFSASEMDVLGEAISKAWHGRGIA ; ;MTQCPRCQRNLAADEFYAGSSKMCKGCMTWQNLSYNANKEGHANTFTKATFLAWYGLSAQRHCGYCGISEAGFTSLHRTN PRGYHIQCLGVDRSDSFEGYSPQNARLACFICNRIKSNIFSASEMDVLGEAISKAWHGRGIA ; A ? 2 polydeoxyribonucleotide no no '(DG)(DA)(DG)(DG)(DC)(DT)(DT)(DA)(DA)(DT)' GAGGCTTAAT B ? 3 polydeoxyribonucleotide no no '(DT)(DA)(DA)(DG)(DC)(DC)(DT)(DC)' TAAGCCTC C ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'ZINC ION' ZN 5 'MAGNESIUM ION' MG 6 'PLATINUM (II) ION' PT 7 'SODIUM ION' NA 8 1,2-ETHANEDIOL EDO 9 'SULFATE ION' SO4 10 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 THR n 1 3 GLN n 1 4 CYS n 1 5 PRO n 1 6 ARG n 1 7 CYS n 1 8 GLN n 1 9 ARG n 1 10 ASN n 1 11 LEU n 1 12 ALA n 1 13 ALA n 1 14 ASP n 1 15 GLU n 1 16 PHE n 1 17 TYR n 1 18 ALA n 1 19 GLY n 1 20 SER n 1 21 SER n 1 22 LYS n 1 23 MET n 1 24 CYS n 1 25 LYS n 1 26 GLY n 1 27 CYS n 1 28 MET n 1 29 THR n 1 30 TRP n 1 31 GLN n 1 32 ASN n 1 33 LEU n 1 34 SER n 1 35 TYR n 1 36 ASN n 1 37 ALA n 1 38 ASN n 1 39 LYS n 1 40 GLU n 1 41 GLY n 1 42 HIS n 1 43 ALA n 1 44 ASN n 1 45 THR n 1 46 PHE n 1 47 THR n 1 48 LYS n 1 49 ALA n 1 50 THR n 1 51 PHE n 1 52 LEU n 1 53 ALA n 1 54 TRP n 1 55 TYR n 1 56 GLY n 1 57 LEU n 1 58 SER n 1 59 ALA n 1 60 GLN n 1 61 ARG n 1 62 HIS n 1 63 CYS n 1 64 GLY n 1 65 TYR n 1 66 CYS n 1 67 GLY n 1 68 ILE n 1 69 SER n 1 70 GLU n 1 71 ALA n 1 72 GLY n 1 73 PHE n 1 74 THR n 1 75 SER n 1 76 LEU n 1 77 HIS n 1 78 ARG n 1 79 THR n 1 80 ASN n 1 81 PRO n 1 82 ARG n 1 83 GLY n 1 84 TYR n 1 85 HIS n 1 86 ILE n 1 87 GLN n 1 88 CYS n 1 89 LEU n 1 90 GLY n 1 91 VAL n 1 92 ASP n 1 93 ARG n 1 94 SER n 1 95 ASP n 1 96 SER n 1 97 PHE n 1 98 GLU n 1 99 GLY n 1 100 TYR n 1 101 SER n 1 102 PRO n 1 103 GLN n 1 104 ASN n 1 105 ALA n 1 106 ARG n 1 107 LEU n 1 108 ALA n 1 109 CYS n 1 110 PHE n 1 111 ILE n 1 112 CYS n 1 113 ASN n 1 114 ARG n 1 115 ILE n 1 116 LYS n 1 117 SER n 1 118 ASN n 1 119 ILE n 1 120 PHE n 1 121 SER n 1 122 ALA n 1 123 SER n 1 124 GLU n 1 125 MET n 1 126 ASP n 1 127 VAL n 1 128 LEU n 1 129 GLY n 1 130 GLU n 1 131 ALA n 1 132 ILE n 1 133 SER n 1 134 LYS n 1 135 ALA n 1 136 TRP n 1 137 HIS n 1 138 GLY n 1 139 ARG n 1 140 GLY n 1 141 ILE n 1 142 ALA n 2 1 DG n 2 2 DA n 2 3 DG n 2 4 DG n 2 5 DC n 2 6 DT n 2 7 DT n 2 8 DA n 2 9 DA n 2 10 DT n 3 1 DT n 3 2 DA n 3 3 DA n 3 4 DG n 3 5 DC n 3 6 DC n 3 7 DT n 3 8 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene pacIR _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'NEB 585' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pseudomonas alcaligenes' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 43263 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Pseudomonas alcaligenes' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 43263 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'NEB 585' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pVS1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 PT non-polymer . 'PLATINUM (II) ION' ? 'Pt 2' 195.078 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 THR 2 2 2 THR THR A . n A 1 3 GLN 3 3 3 GLN GLN A . n A 1 4 CYS 4 4 4 CYS CYS A . n A 1 5 PRO 5 5 5 PRO PRO A . n A 1 6 ARG 6 6 6 ARG ARG A . n A 1 7 CYS 7 7 7 CYS CYS A . n A 1 8 GLN 8 8 8 GLN GLN A . n A 1 9 ARG 9 9 9 ARG ARG A . n A 1 10 ASN 10 10 10 ASN ASN A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 ASP 14 14 14 ASP ASP A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 PHE 16 16 16 PHE PHE A . n A 1 17 TYR 17 17 17 TYR TYR A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 GLY 19 19 19 GLY GLY A . n A 1 20 SER 20 20 20 SER SER A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 LYS 22 22 22 LYS LYS A . n A 1 23 MET 23 23 23 MET MET A . n A 1 24 CYS 24 24 24 CYS CYS A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 CYS 27 27 27 CYS CYS A . n A 1 28 MET 28 28 28 MET MET A . n A 1 29 THR 29 29 29 THR THR A . n A 1 30 TRP 30 30 30 TRP TRP A . n A 1 31 GLN 31 31 31 GLN GLN A . n A 1 32 ASN 32 32 32 ASN ASN A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 TYR 35 35 35 TYR TYR A . n A 1 36 ASN 36 36 36 ASN ASN A . n A 1 37 ALA 37 37 37 ALA ALA A . n A 1 38 ASN 38 38 38 ASN ASN A . n A 1 39 LYS 39 39 39 LYS LYS A . n A 1 40 GLU 40 40 40 GLU GLU A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 HIS 42 42 42 HIS HIS A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 ASN 44 44 44 ASN ASN A . n A 1 45 THR 45 45 45 THR THR A . n A 1 46 PHE 46 46 46 PHE PHE A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 THR 50 50 50 THR THR A . n A 1 51 PHE 51 51 51 PHE PHE A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 TRP 54 54 54 TRP TRP A . n A 1 55 TYR 55 55 55 TYR TYR A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 SER 58 58 58 SER SER A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 GLN 60 60 60 GLN GLN A . n A 1 61 ARG 61 61 61 ARG ARG A . n A 1 62 HIS 62 62 62 HIS HIS A . n A 1 63 CYS 63 63 63 CYS CYS A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 TYR 65 65 65 TYR TYR A . n A 1 66 CYS 66 66 66 CYS CYS A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 ILE 68 68 68 ILE ILE A . n A 1 69 SER 69 69 69 SER SER A . n A 1 70 GLU 70 70 70 GLU GLU A . n A 1 71 ALA 71 71 71 ALA ALA A . n A 1 72 GLY 72 72 72 GLY GLY A . n A 1 73 PHE 73 73 73 PHE PHE A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 SER 75 75 75 SER SER A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 HIS 77 77 77 HIS HIS A . n A 1 78 ARG 78 78 78 ARG ARG A . n A 1 79 THR 79 79 79 THR THR A . n A 1 80 ASN 80 80 80 ASN ASN A . n A 1 81 PRO 81 81 81 PRO PRO A . n A 1 82 ARG 82 82 82 ARG ARG A . n A 1 83 GLY 83 83 83 GLY GLY A . n A 1 84 TYR 84 84 84 TYR TYR A . n A 1 85 HIS 85 85 85 HIS HIS A . n A 1 86 ILE 86 86 86 ILE ILE A . n A 1 87 GLN 87 87 87 GLN GLN A . n A 1 88 CYS 88 88 88 CYS CYS A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 GLY 90 90 90 GLY GLY A . n A 1 91 VAL 91 91 91 VAL VAL A . n A 1 92 ASP 92 92 92 ASP ASP A . n A 1 93 ARG 93 93 93 ARG ARG A . n A 1 94 SER 94 94 94 SER SER A . n A 1 95 ASP 95 95 95 ASP ASP A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 PHE 97 97 97 PHE PHE A . n A 1 98 GLU 98 98 98 GLU GLU A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 TYR 100 100 100 TYR TYR A . n A 1 101 SER 101 101 101 SER SER A . n A 1 102 PRO 102 102 102 PRO PRO A . n A 1 103 GLN 103 103 103 GLN GLN A . n A 1 104 ASN 104 104 104 ASN ASN A . n A 1 105 ALA 105 105 105 ALA ALA A . n A 1 106 ARG 106 106 106 ARG ARG A . n A 1 107 LEU 107 107 107 LEU LEU A . n A 1 108 ALA 108 108 108 ALA ALA A . n A 1 109 CYS 109 109 109 CYS CYS A . n A 1 110 PHE 110 110 110 PHE PHE A . n A 1 111 ILE 111 111 111 ILE ILE A . n A 1 112 CYS 112 112 112 CYS CYS A . n A 1 113 ASN 113 113 113 ASN ASN A . n A 1 114 ARG 114 114 114 ARG ARG A . n A 1 115 ILE 115 115 115 ILE ILE A . n A 1 116 LYS 116 116 116 LYS LYS A . n A 1 117 SER 117 117 117 SER SER A . n A 1 118 ASN 118 118 118 ASN ASN A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 PHE 120 120 120 PHE PHE A . n A 1 121 SER 121 121 121 SER SER A . n A 1 122 ALA 122 122 122 ALA ALA A . n A 1 123 SER 123 123 123 SER SER A . n A 1 124 GLU 124 124 124 GLU GLU A . n A 1 125 MET 125 125 125 MET MET A . n A 1 126 ASP 126 126 126 ASP ASP A . n A 1 127 VAL 127 127 127 VAL VAL A . n A 1 128 LEU 128 128 128 LEU LEU A . n A 1 129 GLY 129 129 129 GLY GLY A . n A 1 130 GLU 130 130 130 GLU GLU A . n A 1 131 ALA 131 131 131 ALA ALA A . n A 1 132 ILE 132 132 132 ILE ILE A . n A 1 133 SER 133 133 133 SER SER A . n A 1 134 LYS 134 134 134 LYS LYS A . n A 1 135 ALA 135 135 135 ALA ALA A . n A 1 136 TRP 136 136 136 TRP TRP A . n A 1 137 HIS 137 137 137 HIS HIS A . n A 1 138 GLY 138 138 138 GLY GLY A . n A 1 139 ARG 139 139 139 ARG ARG A . n A 1 140 GLY 140 140 140 GLY GLY A . n A 1 141 ILE 141 141 141 ILE ILE A . n A 1 142 ALA 142 142 142 ALA ALA A . n B 2 1 DG 1 1 1 DG G B . n B 2 2 DA 2 2 2 DA A B . n B 2 3 DG 3 3 3 DG G B . n B 2 4 DG 4 4 4 DG G B . n B 2 5 DC 5 5 5 DC C B . n B 2 6 DT 6 6 6 DT T B . n B 2 7 DT 7 7 7 DT T B . n B 2 8 DA 8 8 8 DA A B . n B 2 9 DA 9 9 9 DA A B . n B 2 10 DT 10 10 10 DT T B . n C 3 1 DT 1 11 11 DT T C . n C 3 2 DA 2 12 12 DA A C . n C 3 3 DA 3 13 13 DA A C . n C 3 4 DG 4 14 14 DG G C . n C 3 5 DC 5 15 15 DC C C . n C 3 6 DC 6 16 16 DC C C . n C 3 7 DT 7 17 17 DT T C . n C 3 8 DC 8 18 18 DC C C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN 1 143 1 ZN ZN A . E 4 ZN 1 144 2 ZN ZN A . F 5 MG 1 145 3 MG MG A . G 6 PT 1 146 4 PT PT A . H 7 NA 1 147 5 NA NA A . I 7 NA 1 148 8 NA NA A . J 7 NA 1 149 9 NA NA A . K 7 NA 1 150 10 NA NA A . L 7 NA 1 151 11 NA NA A . M 7 NA 1 152 12 NA NA A . N 7 NA 1 153 13 NA NA A . O 8 EDO 1 154 1 EDO EDO A . P 9 SO4 1 155 1 SO4 SO4 A . Q 9 SO4 1 156 2 SO4 SO4 A . R 7 NA 1 11 7 NA NA B . S 7 NA 1 6 6 NA NA C . T 10 HOH 1 157 1 HOH HOH A . T 10 HOH 2 158 3 HOH HOH A . T 10 HOH 3 159 4 HOH HOH A . T 10 HOH 4 160 6 HOH HOH A . T 10 HOH 5 161 10 HOH HOH A . T 10 HOH 6 162 11 HOH HOH A . T 10 HOH 7 163 13 HOH HOH A . T 10 HOH 8 164 14 HOH HOH A . T 10 HOH 9 165 15 HOH HOH A . T 10 HOH 10 166 16 HOH HOH A . T 10 HOH 11 167 17 HOH HOH A . T 10 HOH 12 168 18 HOH HOH A . T 10 HOH 13 169 19 HOH HOH A . T 10 HOH 14 170 20 HOH HOH A . T 10 HOH 15 171 22 HOH HOH A . T 10 HOH 16 172 23 HOH HOH A . T 10 HOH 17 173 24 HOH HOH A . T 10 HOH 18 174 25 HOH HOH A . T 10 HOH 19 175 26 HOH HOH A . T 10 HOH 20 176 27 HOH HOH A . T 10 HOH 21 177 28 HOH HOH A . T 10 HOH 22 178 29 HOH HOH A . T 10 HOH 23 179 30 HOH HOH A . T 10 HOH 24 180 31 HOH HOH A . T 10 HOH 25 181 32 HOH HOH A . T 10 HOH 26 182 34 HOH HOH A . T 10 HOH 27 183 35 HOH HOH A . T 10 HOH 28 184 37 HOH HOH A . T 10 HOH 29 185 42 HOH HOH A . T 10 HOH 30 186 43 HOH HOH A . T 10 HOH 31 187 45 HOH HOH A . T 10 HOH 32 188 46 HOH HOH A . T 10 HOH 33 189 47 HOH HOH A . T 10 HOH 34 190 49 HOH HOH A . T 10 HOH 35 191 50 HOH HOH A . T 10 HOH 36 192 51 HOH HOH A . T 10 HOH 37 193 52 HOH HOH A . T 10 HOH 38 194 53 HOH HOH A . T 10 HOH 39 195 54 HOH HOH A . T 10 HOH 40 196 55 HOH HOH A . T 10 HOH 41 197 56 HOH HOH A . T 10 HOH 42 198 57 HOH HOH A . T 10 HOH 43 199 60 HOH HOH A . T 10 HOH 44 200 61 HOH HOH A . T 10 HOH 45 201 62 HOH HOH A . T 10 HOH 46 202 64 HOH HOH A . T 10 HOH 47 203 65 HOH HOH A . T 10 HOH 48 204 66 HOH HOH A . T 10 HOH 49 205 67 HOH HOH A . T 10 HOH 50 206 69 HOH HOH A . T 10 HOH 51 207 70 HOH HOH A . T 10 HOH 52 208 72 HOH HOH A . T 10 HOH 53 209 75 HOH HOH A . T 10 HOH 54 210 76 HOH HOH A . T 10 HOH 55 211 77 HOH HOH A . T 10 HOH 56 212 79 HOH HOH A . T 10 HOH 57 213 81 HOH HOH A . T 10 HOH 58 214 86 HOH HOH A . T 10 HOH 59 215 87 HOH HOH A . T 10 HOH 60 216 88 HOH HOH A . T 10 HOH 61 217 89 HOH HOH A . T 10 HOH 62 218 90 HOH HOH A . T 10 HOH 63 219 91 HOH HOH A . T 10 HOH 64 220 92 HOH HOH A . T 10 HOH 65 221 93 HOH HOH A . T 10 HOH 66 222 94 HOH HOH A . T 10 HOH 67 223 95 HOH HOH A . T 10 HOH 68 224 97 HOH HOH A . T 10 HOH 69 225 100 HOH HOH A . T 10 HOH 70 226 101 HOH HOH A . T 10 HOH 71 227 104 HOH HOH A . T 10 HOH 72 228 105 HOH HOH A . T 10 HOH 73 229 106 HOH HOH A . T 10 HOH 74 230 107 HOH HOH A . T 10 HOH 75 231 109 HOH HOH A . T 10 HOH 76 232 111 HOH HOH A . T 10 HOH 77 233 120 HOH HOH A . T 10 HOH 78 234 123 HOH HOH A . T 10 HOH 79 235 124 HOH HOH A . T 10 HOH 80 236 126 HOH HOH A . T 10 HOH 81 237 127 HOH HOH A . T 10 HOH 82 238 128 HOH HOH A . T 10 HOH 83 239 130 HOH HOH A . T 10 HOH 84 240 131 HOH HOH A . T 10 HOH 85 241 133 HOH HOH A . T 10 HOH 86 242 134 HOH HOH A . T 10 HOH 87 243 135 HOH HOH A . T 10 HOH 88 244 136 HOH HOH A . T 10 HOH 89 245 137 HOH HOH A . T 10 HOH 90 246 138 HOH HOH A . T 10 HOH 91 247 139 HOH HOH A . T 10 HOH 92 248 140 HOH HOH A . U 10 HOH 1 12 12 HOH HOH B . U 10 HOH 2 21 21 HOH HOH B . U 10 HOH 3 38 38 HOH HOH B . U 10 HOH 4 44 44 HOH HOH B . U 10 HOH 5 48 48 HOH HOH B . U 10 HOH 6 58 58 HOH HOH B . U 10 HOH 7 59 59 HOH HOH B . U 10 HOH 8 68 68 HOH HOH B . U 10 HOH 9 83 83 HOH HOH B . U 10 HOH 10 98 98 HOH HOH B . U 10 HOH 11 112 112 HOH HOH B . U 10 HOH 12 114 114 HOH HOH B . U 10 HOH 13 117 117 HOH HOH B . U 10 HOH 14 118 118 HOH HOH B . V 10 HOH 1 2 2 HOH HOH C . V 10 HOH 2 5 5 HOH HOH C . V 10 HOH 3 7 7 HOH HOH C . V 10 HOH 4 9 9 HOH HOH C . V 10 HOH 5 36 36 HOH HOH C . V 10 HOH 6 41 41 HOH HOH C . V 10 HOH 7 63 63 HOH HOH C . V 10 HOH 8 102 102 HOH HOH C . # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 SOLVE 2.13 24-Feb-2008 program 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 4 RESOLVE 2.13 6-Mar-2008 program 'Thomas C. Terwilliger' terwilliger@lanl.gov phasing http://www.solve.lanl.gov/ ? ? 5 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 6 PDB_EXTRACT 3.100 'Jan. 22, 2010' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 7 HKL-2000 . ? ? ? ? 'data collection' ? ? ? 8 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? # _cell.length_a 37.089 _cell.length_b 114.927 _cell.length_c 114.322 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3M7K _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.entry_id 3M7K _symmetry.Int_Tables_number 20 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 3M7K _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.87 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 57.08 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '22% PEG3K, 2.5% ethylene glycol, 10 mM MgSO4, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2009-01-01 _diffrn_detector.details 'Double-crystal, Si(111)' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Double-crystal, Si(111)' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0718 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 5.0.2' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0718 _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 5.0.2 # _reflns.entry_id 3M7K _reflns.d_resolution_high 1.910 _reflns.d_resolution_low 50.000 _reflns.number_obs 19148 _reflns.pdbx_Rmerge_I_obs 0.062 _reflns.pdbx_netI_over_sigmaI 28.200 _reflns.pdbx_chi_squared 1.309 _reflns.pdbx_redundancy 13.500 _reflns.percent_possible_obs 98.600 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.91 _reflns_shell.d_res_low 1.98 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.266 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 1.046 _reflns_shell.pdbx_redundancy 11.10 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1761 _reflns_shell.percent_possible_all 92.40 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3M7K _refine.ls_d_res_high 1.920 _refine.ls_d_res_low 20.260 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.810 _refine.ls_number_reflns_obs 18941 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : RESIDUAL ONLY' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.173 _refine.ls_R_factor_R_work 0.172 _refine.ls_wR_factor_R_work 0.201 _refine.ls_R_factor_R_free 0.201 _refine.ls_wR_factor_R_free 0.234 _refine.ls_percent_reflns_R_free 5.200 _refine.ls_number_reflns_R_free 976 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 45.109 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 1.150 _refine.aniso_B[2][2] 3.550 _refine.aniso_B[3][3] -4.700 _refine.aniso_B[1][2] -0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] -0.000 _refine.correlation_coeff_Fo_to_Fc 0.967 _refine.correlation_coeff_Fo_to_Fc_free 0.959 _refine.overall_SU_R_Cruickshank_DPI 0.249 _refine.overall_SU_R_free 0.120 _refine.pdbx_overall_ESU_R 0.249 _refine.pdbx_overall_ESU_R_Free 0.120 _refine.overall_SU_ML 0.091 _refine.overall_SU_B 7.000 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MIR _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.867 _refine.B_iso_max 151.19 _refine.B_iso_min 18.85 _refine.occupancy_max 1.00 _refine.occupancy_min 0.25 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1102 _refine_hist.pdbx_number_atoms_nucleic_acid 367 _refine_hist.pdbx_number_atoms_ligand 27 _refine_hist.number_atoms_solvent 114 _refine_hist.number_atoms_total 1610 _refine_hist.d_res_high 1.920 _refine_hist.d_res_low 20.260 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1608 0.011 0.021 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2259 1.305 2.222 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 159 5.199 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 60 34.700 23.333 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 195 14.264 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 9 20.405 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 236 0.079 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1133 0.006 0.020 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 730 1.300 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1167 2.365 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 878 2.767 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 1084 4.172 4.500 ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 1608 1.544 3.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.920 _refine_ls_shell.d_res_low 1.969 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 95.240 _refine_ls_shell.number_reflns_R_work 1251 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.217 _refine_ls_shell.R_factor_R_free 0.285 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 70 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1321 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3M7K _struct.title 'Crystal structure of PacI-DNA Enzyme product complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3M7K _struct_keywords.pdbx_keywords HYDROLASE/DNA _struct_keywords.text 'HNH restriction endonuclease, beta-beta-alpha-metal active site, 8 base-pair rare cutter, HYDROLASE-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 6 ? H N N 7 ? I N N 7 ? J N N 7 ? K N N 7 ? L N N 7 ? M N N 7 ? N N N 7 ? O N N 8 ? P N N 9 ? Q N N 9 ? R N N 7 ? S N N 7 ? T N N 10 ? U N N 10 ? V N N 10 ? # loop_ _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 3M7K 1 PDB 3M7K ;MTQCPRCQRNLAADEFYAGSSKMCKGCMTWQNLSYNANKEGHANTFTKATFLAWYGLSAQRHCGYCGISEAGFTSLHRTN PRGYHIQCLGVDRSDSFEGYSPQNARLACFICNRIKSNIFSASEMDVLGEAISKAWHGRGIA ; 1 ? 2 3M7K 2 PDB 3M7K GAGGCTTAAT 1 ? 3 3M7K 3 PDB 3M7K TAAGCCTC 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3M7K A 1 ? 142 ? 3M7K 1 ? 142 ? 1 142 2 2 3M7K B 1 ? 10 ? 3M7K 1 ? 10 ? 1 10 3 3 3M7K C 1 ? 8 ? 3M7K 11 ? 18 ? 11 18 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 14080 ? 1 MORE -325 ? 1 'SSA (A^2)' 15310 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 37.0890000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 57.1610000000 # _struct_biol.id 1 _struct_biol.details 'The second part of the dimeric assembly is generated by the two fold operator -x+1, y, -z+1/2' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 12 ? PHE A 16 ? ALA A 12 PHE A 16 5 ? 5 HELX_P HELX_P2 2 CYS A 24 ? GLY A 41 ? CYS A 24 GLY A 41 1 ? 18 HELX_P HELX_P3 3 THR A 47 ? GLY A 56 ? THR A 47 GLY A 56 1 ? 10 HELX_P HELX_P4 4 LEU A 57 ? ARG A 61 ? LEU A 57 ARG A 61 5 ? 5 HELX_P HELX_P5 5 SER A 69 ? SER A 75 ? SER A 69 SER A 75 1 ? 7 HELX_P HELX_P6 6 CYS A 109 ? SER A 117 ? CYS A 109 SER A 117 1 ? 9 HELX_P HELX_P7 7 SER A 121 ? ARG A 139 ? SER A 121 ARG A 139 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 4 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 4 A ZN 144 1_555 ? ? ? ? ? ? ? 2.281 ? ? metalc2 metalc ? ? A CYS 7 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 7 A ZN 144 1_555 ? ? ? ? ? ? ? 2.450 ? ? metalc3 metalc ? ? A MET 23 SD ? ? ? 1_555 G PT . PT ? ? A MET 23 A PT 146 1_555 ? ? ? ? ? ? ? 2.013 ? ? metalc4 metalc ? ? A CYS 24 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 24 A ZN 144 1_555 ? ? ? ? ? ? ? 2.305 ? ? metalc5 metalc ? ? A CYS 27 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 27 A ZN 144 1_555 ? ? ? ? ? ? ? 2.298 ? ? metalc6 metalc ? ? A MET 28 SD ? ? ? 1_555 G PT . PT ? ? A MET 28 A PT 146 1_555 ? ? ? ? ? ? ? 2.103 ? ? metalc7 metalc ? ? A GLN 60 O ? ? ? 1_555 I NA . NA ? ? A GLN 60 A NA 148 1_555 ? ? ? ? ? ? ? 3.134 ? ? metalc8 metalc ? ? A CYS 63 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 63 A ZN 143 1_555 ? ? ? ? ? ? ? 2.409 ? ? metalc9 metalc ? ? A CYS 66 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 66 A ZN 143 1_555 ? ? ? ? ? ? ? 2.285 ? ? metalc10 metalc ? ? A ASP 92 OD1 ? ? ? 1_555 F MG . MG ? ? A ASP 92 A MG 145 1_555 ? ? ? ? ? ? ? 2.374 ? ? metalc11 metalc ? ? A CYS 109 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 109 A ZN 143 1_555 ? ? ? ? ? ? ? 2.335 ? ? metalc12 metalc ? ? A CYS 112 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 112 A ZN 143 1_555 ? ? ? ? ? ? ? 2.346 ? ? metalc13 metalc ? ? A ASN 113 OD1 ? ? ? 1_555 F MG . MG ? ? A ASN 113 A MG 145 1_555 ? ? ? ? ? ? ? 2.333 ? ? metalc14 metalc ? ? A VAL 127 O ? ? ? 1_555 N NA . NA ? ? A VAL 127 A NA 153 1_555 ? ? ? ? ? ? ? 2.940 ? ? metalc15 metalc ? ? A GLU 130 OE1 B ? ? 1_555 N NA . NA ? ? A GLU 130 A NA 153 1_555 ? ? ? ? ? ? ? 3.172 ? ? metalc16 metalc ? ? F MG . MG ? ? ? 1_555 T HOH . O ? ? A MG 145 A HOH 157 1_555 ? ? ? ? ? ? ? 2.368 ? ? metalc17 metalc ? ? F MG . MG ? ? ? 1_555 T HOH . O ? ? A MG 145 A HOH 160 1_555 ? ? ? ? ? ? ? 2.311 ? ? metalc18 metalc ? ? F MG . MG ? ? ? 1_555 V HOH . O ? ? A MG 145 C HOH 7 1_555 ? ? ? ? ? ? ? 2.778 ? ? metalc19 metalc ? ? G PT . PT ? ? ? 1_555 V HOH . O ? ? A PT 146 C HOH 102 1_555 ? ? ? ? ? ? ? 2.722 ? ? metalc20 metalc ? ? H NA . NA ? ? ? 1_555 T HOH . O ? ? A NA 147 A HOH 244 1_555 ? ? ? ? ? ? ? 2.324 ? ? metalc21 metalc ? ? I NA . NA ? ? ? 1_555 Q SO4 . O1 ? ? A NA 148 A SO4 156 1_555 ? ? ? ? ? ? ? 2.551 ? ? metalc22 metalc ? ? I NA . NA ? ? ? 1_555 T HOH . O ? ? A NA 148 A HOH 213 1_555 ? ? ? ? ? ? ? 3.062 ? ? metalc23 metalc ? ? I NA . NA ? ? ? 1_555 T HOH . O ? ? A NA 148 A HOH 219 1_555 ? ? ? ? ? ? ? 2.516 ? ? metalc24 metalc ? ? J NA . NA ? ? ? 1_555 T HOH . O ? ? A NA 149 A HOH 211 1_555 ? ? ? ? ? ? ? 2.414 ? ? metalc25 metalc ? ? K NA . NA ? ? ? 1_555 T HOH . O ? ? A NA 150 A HOH 198 1_555 ? ? ? ? ? ? ? 3.085 ? ? metalc26 metalc ? ? K NA . NA ? ? ? 1_555 T HOH . O ? ? A NA 150 A HOH 225 1_555 ? ? ? ? ? ? ? 2.416 ? ? metalc27 metalc ? ? L NA . NA ? ? ? 1_555 T HOH . O ? ? A NA 151 A HOH 237 1_555 ? ? ? ? ? ? ? 2.116 ? ? metalc28 metalc ? ? L NA . NA ? ? ? 1_555 T HOH . O ? ? A NA 151 A HOH 245 1_555 ? ? ? ? ? ? ? 2.754 ? ? metalc29 metalc ? ? L NA . NA ? ? ? 1_555 T HOH . O ? ? A NA 151 A HOH 246 1_555 ? ? ? ? ? ? ? 1.980 ? ? metalc30 metalc ? ? M NA . NA ? ? ? 1_555 T HOH . O ? ? A NA 152 A HOH 221 1_555 ? ? ? ? ? ? ? 2.552 ? ? metalc31 metalc ? ? M NA . NA ? ? ? 1_555 T HOH . O ? ? A NA 152 A HOH 231 1_555 ? ? ? ? ? ? ? 2.337 ? ? metalc32 metalc ? ? N NA . NA ? ? ? 1_555 T HOH . O ? ? A NA 153 A HOH 202 1_555 ? ? ? ? ? ? ? 2.655 ? ? metalc33 metalc ? ? T HOH . O ? ? ? 1_555 S NA . NA ? ? A HOH 162 C NA 6 1_555 ? ? ? ? ? ? ? 2.205 ? ? metalc34 metalc ? ? T HOH . O ? ? ? 1_555 R NA . NA ? ? A HOH 171 B NA 11 1_555 ? ? ? ? ? ? ? 2.435 ? ? metalc35 metalc ? ? V HOH . O ? ? ? 1_555 S NA . NA ? ? C HOH 5 C NA 6 1_555 ? ? ? ? ? ? ? 3.028 ? ? metalc36 metalc ? ? S NA . NA ? ? ? 1_555 V HOH . O ? ? C NA 6 C HOH 36 1_555 ? ? ? ? ? ? ? 2.101 ? ? hydrog1 hydrog ? ? B DG 1 N1 ? ? ? 1_555 C DC 8 N3 ? ? B DG 1 C DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 1 N2 ? ? ? 1_555 C DC 8 O2 ? ? B DG 1 C DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 1 O6 ? ? ? 1_555 C DC 8 N4 ? ? B DG 1 C DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DA 2 N1 ? ? ? 1_555 C DT 7 N3 ? ? B DA 2 C DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DA 2 N6 ? ? ? 1_555 C DT 7 O4 ? ? B DA 2 C DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DG 3 N1 ? ? ? 1_555 C DC 6 N3 ? ? B DG 3 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DG 3 N2 ? ? ? 1_555 C DC 6 O2 ? ? B DG 3 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 3 O6 ? ? ? 1_555 C DC 6 N4 ? ? B DG 3 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 4 N1 ? ? ? 1_555 C DC 5 N3 ? ? B DG 4 C DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DG 4 N2 ? ? ? 1_555 C DC 5 O2 ? ? B DG 4 C DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DG 4 O6 ? ? ? 1_555 C DC 5 N4 ? ? B DG 4 C DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 5 N3 ? ? ? 1_555 C DG 4 N1 ? ? B DC 5 C DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DC 5 N4 ? ? ? 1_555 C DG 4 O6 ? ? B DC 5 C DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 5 O2 ? ? ? 1_555 C DG 4 N2 ? ? B DC 5 C DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DT 6 N3 ? ? ? 1_555 C DA 2 N1 ? ? B DT 6 C DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DT 6 O4 ? ? ? 1_555 C DA 2 N6 ? ? B DT 6 C DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DT 7 N3 ? ? ? 1_555 C DT 1 O4 ? ? B DT 7 C DT 11 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog18 hydrog ? ? B DT 7 O2 ? ? ? 1_555 C DT 1 N3 ? ? B DT 7 C DT 11 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 4 ? A CYS 4 ? 1_555 ZN ? E ZN . ? A ZN 144 ? 1_555 SG ? A CYS 7 ? A CYS 7 ? 1_555 103.6 ? 2 SG ? A CYS 4 ? A CYS 4 ? 1_555 ZN ? E ZN . ? A ZN 144 ? 1_555 SG ? A CYS 24 ? A CYS 24 ? 1_555 112.0 ? 3 SG ? A CYS 7 ? A CYS 7 ? 1_555 ZN ? E ZN . ? A ZN 144 ? 1_555 SG ? A CYS 24 ? A CYS 24 ? 1_555 112.1 ? 4 SG ? A CYS 4 ? A CYS 4 ? 1_555 ZN ? E ZN . ? A ZN 144 ? 1_555 SG ? A CYS 27 ? A CYS 27 ? 1_555 113.1 ? 5 SG ? A CYS 7 ? A CYS 7 ? 1_555 ZN ? E ZN . ? A ZN 144 ? 1_555 SG ? A CYS 27 ? A CYS 27 ? 1_555 105.2 ? 6 SG ? A CYS 24 ? A CYS 24 ? 1_555 ZN ? E ZN . ? A ZN 144 ? 1_555 SG ? A CYS 27 ? A CYS 27 ? 1_555 110.5 ? 7 SD ? A MET 23 ? A MET 23 ? 1_555 PT ? G PT . ? A PT 146 ? 1_555 SD ? A MET 28 ? A MET 28 ? 1_555 93.1 ? 8 SD ? A MET 23 ? A MET 23 ? 1_555 PT ? G PT . ? A PT 146 ? 1_555 O ? V HOH . ? C HOH 102 ? 1_555 105.6 ? 9 SD ? A MET 28 ? A MET 28 ? 1_555 PT ? G PT . ? A PT 146 ? 1_555 O ? V HOH . ? C HOH 102 ? 1_555 150.6 ? 10 O ? A GLN 60 ? A GLN 60 ? 1_555 NA ? I NA . ? A NA 148 ? 1_555 O1 ? Q SO4 . ? A SO4 156 ? 1_555 59.9 ? 11 O ? A GLN 60 ? A GLN 60 ? 1_555 NA ? I NA . ? A NA 148 ? 1_555 O ? T HOH . ? A HOH 213 ? 1_555 151.6 ? 12 O1 ? Q SO4 . ? A SO4 156 ? 1_555 NA ? I NA . ? A NA 148 ? 1_555 O ? T HOH . ? A HOH 213 ? 1_555 144.0 ? 13 O ? A GLN 60 ? A GLN 60 ? 1_555 NA ? I NA . ? A NA 148 ? 1_555 O ? T HOH . ? A HOH 219 ? 1_555 70.6 ? 14 O1 ? Q SO4 . ? A SO4 156 ? 1_555 NA ? I NA . ? A NA 148 ? 1_555 O ? T HOH . ? A HOH 219 ? 1_555 123.8 ? 15 O ? T HOH . ? A HOH 213 ? 1_555 NA ? I NA . ? A NA 148 ? 1_555 O ? T HOH . ? A HOH 219 ? 1_555 91.7 ? 16 SG ? A CYS 63 ? A CYS 63 ? 1_555 ZN ? D ZN . ? A ZN 143 ? 1_555 SG ? A CYS 66 ? A CYS 66 ? 1_555 103.8 ? 17 SG ? A CYS 63 ? A CYS 63 ? 1_555 ZN ? D ZN . ? A ZN 143 ? 1_555 SG ? A CYS 109 ? A CYS 109 ? 1_555 115.1 ? 18 SG ? A CYS 66 ? A CYS 66 ? 1_555 ZN ? D ZN . ? A ZN 143 ? 1_555 SG ? A CYS 109 ? A CYS 109 ? 1_555 115.6 ? 19 SG ? A CYS 63 ? A CYS 63 ? 1_555 ZN ? D ZN . ? A ZN 143 ? 1_555 SG ? A CYS 112 ? A CYS 112 ? 1_555 106.2 ? 20 SG ? A CYS 66 ? A CYS 66 ? 1_555 ZN ? D ZN . ? A ZN 143 ? 1_555 SG ? A CYS 112 ? A CYS 112 ? 1_555 108.8 ? 21 SG ? A CYS 109 ? A CYS 109 ? 1_555 ZN ? D ZN . ? A ZN 143 ? 1_555 SG ? A CYS 112 ? A CYS 112 ? 1_555 106.9 ? 22 OD1 ? A ASP 92 ? A ASP 92 ? 1_555 MG ? F MG . ? A MG 145 ? 1_555 OD1 ? A ASN 113 ? A ASN 113 ? 1_555 91.7 ? 23 OD1 ? A ASP 92 ? A ASP 92 ? 1_555 MG ? F MG . ? A MG 145 ? 1_555 O ? T HOH . ? A HOH 157 ? 1_555 94.3 ? 24 OD1 ? A ASN 113 ? A ASN 113 ? 1_555 MG ? F MG . ? A MG 145 ? 1_555 O ? T HOH . ? A HOH 157 ? 1_555 86.8 ? 25 OD1 ? A ASP 92 ? A ASP 92 ? 1_555 MG ? F MG . ? A MG 145 ? 1_555 O ? T HOH . ? A HOH 160 ? 1_555 80.5 ? 26 OD1 ? A ASN 113 ? A ASN 113 ? 1_555 MG ? F MG . ? A MG 145 ? 1_555 O ? T HOH . ? A HOH 160 ? 1_555 172.1 ? 27 O ? T HOH . ? A HOH 157 ? 1_555 MG ? F MG . ? A MG 145 ? 1_555 O ? T HOH . ? A HOH 160 ? 1_555 94.8 ? 28 OD1 ? A ASP 92 ? A ASP 92 ? 1_555 MG ? F MG . ? A MG 145 ? 1_555 O ? V HOH . ? C HOH 7 ? 1_555 108.1 ? 29 OD1 ? A ASN 113 ? A ASN 113 ? 1_555 MG ? F MG . ? A MG 145 ? 1_555 O ? V HOH . ? C HOH 7 ? 1_555 92.4 ? 30 O ? T HOH . ? A HOH 157 ? 1_555 MG ? F MG . ? A MG 145 ? 1_555 O ? V HOH . ? C HOH 7 ? 1_555 157.5 ? 31 O ? T HOH . ? A HOH 160 ? 1_555 MG ? F MG . ? A MG 145 ? 1_555 O ? V HOH . ? C HOH 7 ? 1_555 89.1 ? 32 O ? A VAL 127 ? A VAL 127 ? 1_555 NA ? N NA . ? A NA 153 ? 1_555 OE1 B A GLU 130 ? A GLU 130 ? 1_555 80.6 ? 33 O ? A VAL 127 ? A VAL 127 ? 1_555 NA ? N NA . ? A NA 153 ? 1_555 O ? T HOH . ? A HOH 202 ? 1_555 122.2 ? 34 OE1 B A GLU 130 ? A GLU 130 ? 1_555 NA ? N NA . ? A NA 153 ? 1_555 O ? T HOH . ? A HOH 202 ? 1_555 108.8 ? 35 O ? T HOH . ? A HOH 198 ? 1_555 NA ? K NA . ? A NA 150 ? 1_555 O ? T HOH . ? A HOH 225 ? 1_555 65.1 ? 36 O ? T HOH . ? A HOH 237 ? 1_555 NA ? L NA . ? A NA 151 ? 1_555 O ? T HOH . ? A HOH 245 ? 1_555 65.7 ? 37 O ? T HOH . ? A HOH 237 ? 1_555 NA ? L NA . ? A NA 151 ? 1_555 O ? T HOH . ? A HOH 246 ? 1_555 152.4 ? 38 O ? T HOH . ? A HOH 245 ? 1_555 NA ? L NA . ? A NA 151 ? 1_555 O ? T HOH . ? A HOH 246 ? 1_555 87.1 ? 39 O ? T HOH . ? A HOH 221 ? 1_555 NA ? M NA . ? A NA 152 ? 1_555 O ? T HOH . ? A HOH 231 ? 1_555 120.9 ? 40 O ? T HOH . ? A HOH 162 ? 1_555 NA ? S NA . ? C NA 6 ? 1_555 O ? V HOH . ? C HOH 5 ? 1_555 121.6 ? 41 O ? T HOH . ? A HOH 162 ? 1_555 NA ? S NA . ? C NA 6 ? 1_555 O ? V HOH . ? C HOH 36 ? 1_555 93.8 ? 42 O ? V HOH . ? C HOH 5 ? 1_555 NA ? S NA . ? C NA 6 ? 1_555 O ? V HOH . ? C HOH 36 ? 1_555 98.6 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 2 ? GLN A 3 ? THR A 2 GLN A 3 A 2 ASN A 10 ? LEU A 11 ? ASN A 10 LEU A 11 B 1 GLY A 90 ? ARG A 93 ? GLY A 90 ARG A 93 B 2 ALA A 105 ? ALA A 108 ? ALA A 105 ALA A 108 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 2 ? N THR A 2 O LEU A 11 ? O LEU A 11 B 1 2 N ASP A 92 ? N ASP A 92 O ARG A 106 ? O ARG A 106 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 143 ? 4 'BINDING SITE FOR RESIDUE ZN A 143' AC2 Software A ZN 144 ? 4 'BINDING SITE FOR RESIDUE ZN A 144' AC3 Software A MG 145 ? 6 'BINDING SITE FOR RESIDUE MG A 145' AC4 Software A PT 146 ? 4 'BINDING SITE FOR RESIDUE PT A 146' AC5 Software A NA 147 ? 2 'BINDING SITE FOR RESIDUE NA A 147' AC6 Software C NA 6 ? 4 'BINDING SITE FOR RESIDUE NA C 6' AC7 Software B NA 11 ? 2 'BINDING SITE FOR RESIDUE NA B 11' AC8 Software A NA 148 ? 5 'BINDING SITE FOR RESIDUE NA A 148' AC9 Software A NA 149 ? 1 'BINDING SITE FOR RESIDUE NA A 149' BC1 Software A NA 150 ? 4 'BINDING SITE FOR RESIDUE NA A 150' BC2 Software A NA 151 ? 4 'BINDING SITE FOR RESIDUE NA A 151' BC3 Software A NA 152 ? 2 'BINDING SITE FOR RESIDUE NA A 152' BC4 Software A NA 153 ? 4 'BINDING SITE FOR RESIDUE NA A 153' BC5 Software A EDO 154 ? 4 'BINDING SITE FOR RESIDUE EDO A 154' BC6 Software A SO4 155 ? 3 'BINDING SITE FOR RESIDUE SO4 A 155' BC7 Software A SO4 156 ? 6 'BINDING SITE FOR RESIDUE SO4 A 156' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 63 ? CYS A 63 . ? 1_555 ? 2 AC1 4 CYS A 66 ? CYS A 66 . ? 1_555 ? 3 AC1 4 CYS A 109 ? CYS A 109 . ? 1_555 ? 4 AC1 4 CYS A 112 ? CYS A 112 . ? 1_555 ? 5 AC2 4 CYS A 4 ? CYS A 4 . ? 1_555 ? 6 AC2 4 CYS A 7 ? CYS A 7 . ? 1_555 ? 7 AC2 4 CYS A 24 ? CYS A 24 . ? 1_555 ? 8 AC2 4 CYS A 27 ? CYS A 27 . ? 1_555 ? 9 AC3 6 ASP A 92 ? ASP A 92 . ? 1_555 ? 10 AC3 6 ASN A 113 ? ASN A 113 . ? 1_555 ? 11 AC3 6 HOH T . ? HOH A 157 . ? 1_555 ? 12 AC3 6 HOH T . ? HOH A 160 . ? 1_555 ? 13 AC3 6 DT B 10 ? DT B 10 . ? 3_655 ? 14 AC3 6 HOH V . ? HOH C 7 . ? 1_555 ? 15 AC4 4 MET A 23 ? MET A 23 . ? 1_555 ? 16 AC4 4 MET A 28 ? MET A 28 . ? 1_555 ? 17 AC4 4 DG C 4 ? DG C 14 . ? 1_555 ? 18 AC4 4 HOH V . ? HOH C 102 . ? 1_555 ? 19 AC5 2 HIS A 77 ? HIS A 77 . ? 1_555 ? 20 AC5 2 HOH T . ? HOH A 244 . ? 1_555 ? 21 AC6 4 HOH T . ? HOH A 162 . ? 1_555 ? 22 AC6 4 HOH V . ? HOH C 5 . ? 1_555 ? 23 AC6 4 DA C 2 ? DA C 12 . ? 1_555 ? 24 AC6 4 HOH V . ? HOH C 36 . ? 1_555 ? 25 AC7 2 HOH T . ? HOH A 171 . ? 1_555 ? 26 AC7 2 DA B 8 ? DA B 8 . ? 3_655 ? 27 AC8 5 GLN A 60 ? GLN A 60 . ? 1_555 ? 28 AC8 5 HIS A 62 ? HIS A 62 . ? 1_555 ? 29 AC8 5 SO4 Q . ? SO4 A 156 . ? 1_555 ? 30 AC8 5 HOH T . ? HOH A 213 . ? 1_555 ? 31 AC8 5 HOH T . ? HOH A 219 . ? 1_555 ? 32 AC9 1 HOH T . ? HOH A 211 . ? 1_555 ? 33 BC1 4 ALA A 12 ? ALA A 12 . ? 1_555 ? 34 BC1 4 THR A 50 ? THR A 50 . ? 8_556 ? 35 BC1 4 HOH T . ? HOH A 198 . ? 1_555 ? 36 BC1 4 HOH T . ? HOH A 225 . ? 1_555 ? 37 BC2 4 HIS A 85 ? HIS A 85 . ? 1_555 ? 38 BC2 4 HOH T . ? HOH A 237 . ? 1_555 ? 39 BC2 4 HOH T . ? HOH A 245 . ? 1_555 ? 40 BC2 4 HOH T . ? HOH A 246 . ? 1_555 ? 41 BC3 2 HOH T . ? HOH A 221 . ? 1_555 ? 42 BC3 2 HOH T . ? HOH A 231 . ? 1_555 ? 43 BC4 4 VAL A 127 ? VAL A 127 . ? 1_555 ? 44 BC4 4 GLU A 130 ? GLU A 130 . ? 1_555 ? 45 BC4 4 HOH T . ? HOH A 202 . ? 3_655 ? 46 BC4 4 HOH T . ? HOH A 202 . ? 1_555 ? 47 BC5 4 ILE A 119 ? ILE A 119 . ? 1_555 ? 48 BC5 4 SER A 121 ? SER A 121 . ? 1_555 ? 49 BC5 4 ARG A 139 ? ARG A 139 . ? 3_655 ? 50 BC5 4 HOH T . ? HOH A 172 . ? 1_555 ? 51 BC6 3 HOH T . ? HOH A 213 . ? 1_555 ? 52 BC6 3 HOH T . ? HOH A 216 . ? 1_555 ? 53 BC6 3 HOH T . ? HOH A 238 . ? 1_555 ? 54 BC7 6 MET A 1 ? MET A 1 . ? 8_456 ? 55 BC7 6 TRP A 54 ? TRP A 54 . ? 1_555 ? 56 BC7 6 TYR A 55 ? TYR A 55 . ? 1_555 ? 57 BC7 6 GLN A 60 ? GLN A 60 . ? 1_555 ? 58 BC7 6 ARG A 61 ? ARG A 61 . ? 1_555 ? 59 BC7 6 NA I . ? NA A 148 . ? 1_555 ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 C _pdbx_validate_rmsd_bond.auth_comp_id_1 DT _pdbx_validate_rmsd_bond.auth_seq_id_1 11 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 C _pdbx_validate_rmsd_bond.auth_comp_id_2 DT _pdbx_validate_rmsd_bond.auth_seq_id_2 11 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.488 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.119 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" B DG 3 ? ? "C2'" B DG 3 ? ? "C1'" B DG 3 ? ? 97.31 102.40 -5.09 0.80 N 2 1 "O4'" B DG 3 ? ? "C1'" B DG 3 ? ? N9 B DG 3 ? ? 112.66 108.30 4.36 0.30 N 3 1 "O4'" B DC 5 ? ? "C1'" B DC 5 ? ? N1 B DC 5 ? ? 112.94 108.30 4.64 0.30 N 4 1 "C1'" C DG 14 ? ? "O4'" C DG 14 ? ? "C4'" C DG 14 ? ? 103.32 110.10 -6.78 1.00 N 5 1 "O4'" C DC 16 ? ? "C1'" C DC 16 ? ? N1 C DC 16 ? ? 111.27 108.30 2.97 0.30 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id SER _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 117 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 47.44 _pdbx_validate_torsion.psi -133.45 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id B _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 48 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id U _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 1.910 _diffrn_reflns.pdbx_d_res_low 50.000 _diffrn_reflns.pdbx_number_obs 19094 _diffrn_reflns.pdbx_Rmerge_I_obs 0.053 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 1.60 _diffrn_reflns.av_sigmaI_over_netI 36.31 _diffrn_reflns.pdbx_redundancy 7.90 _diffrn_reflns.pdbx_percent_possible_obs 98.50 _diffrn_reflns.number 151016 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 4.11 50.00 ? ? 0.048 ? 4.904 7.30 94.10 1 3.27 4.11 ? ? 0.044 ? 1.671 7.90 99.10 1 2.85 3.27 ? ? 0.046 ? 1.469 8.00 99.80 1 2.59 2.85 ? ? 0.054 ? 1.432 8.10 100.00 1 2.41 2.59 ? ? 0.066 ? 1.247 8.20 100.00 1 2.26 2.41 ? ? 0.080 ? 1.086 8.30 100.00 1 2.15 2.26 ? ? 0.109 ? 1.088 8.20 100.00 1 2.06 2.15 ? ? 0.133 ? 1.119 8.20 99.40 1 1.98 2.06 ? ? 0.183 ? 1.093 7.80 99.00 1 1.91 1.98 ? ? 0.226 ? 1.085 6.90 93.80 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 19.7691 32.8497 44.5516 0.0231 0.0260 0.0025 -0.0050 -0.0056 0.0016 0.0839 0.5359 1.2985 -0.0766 -0.0712 -0.1027 0.0110 0.0296 -0.0406 -0.0338 -0.0030 -0.0113 0.0831 0.0173 0.0182 'X-RAY DIFFRACTION' 2 ? refined 21.1873 47.2614 40.6220 0.0721 0.0101 0.0302 -0.0079 0.0211 -0.0101 0.5695 0.9079 1.9079 -0.0365 -0.0125 0.9691 0.0251 -0.0281 0.0030 -0.0108 0.1121 0.0250 0.0916 -0.1036 -0.0389 'X-RAY DIFFRACTION' 3 ? refined 24.2371 49.0316 45.5685 0.0587 0.1225 0.0878 0.0123 0.0125 0.0336 0.3975 0.1889 2.0067 0.0476 -0.2785 -0.1715 0.0023 -0.0131 0.0108 -0.1312 0.0173 -0.0322 0.0151 -0.2219 0.2622 'X-RAY DIFFRACTION' 4 ? refined 21.1916 32.4357 41.9831 0.0526 0.1203 0.1125 0.0216 -0.0305 -0.0761 0.1046 1.1584 0.9493 0.0495 -0.1853 0.0474 0.0455 -0.0780 0.0326 0.0442 -0.0656 0.0359 -0.0330 -0.0711 0.0374 'X-RAY DIFFRACTION' 5 ? refined 4.8100 28.4772 31.1667 0.1829 0.2368 0.1636 -0.0527 0.1052 0.0410 356.6372 481.3037 38.0110 -414.3076 -116.4308 135.2584 1.4489 -1.4002 -0.0487 1.2176 0.2026 -0.2358 -1.6642 -0.4657 -0.3963 'X-RAY DIFFRACTION' 6 ? refined 20.9571 33.6845 41.3719 0.0254 0.0316 0.0233 -0.0025 -0.0053 0.0017 0.8300 0.4174 1.5724 0.1752 -0.0762 0.1458 0.0180 -0.0105 -0.0076 -0.0714 -0.0210 -0.0359 0.0922 -0.0008 0.0562 'X-RAY DIFFRACTION' 7 ? refined 18.6094 22.6971 48.7351 0.5543 0.1742 0.1324 0.1123 0.0900 -0.0726 7.1170 8.4918 1.6335 -7.7731 3.4093 -3.7243 0.3215 -0.0581 -0.2634 0.0009 -0.4596 0.5041 -0.4219 0.1796 0.0074 'X-RAY DIFFRACTION' 8 ? refined 0.0000 0.0000 0.0000 0.0383 0.0383 0.0383 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 -0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 'X-RAY DIFFRACTION' 9 ? refined 0.0000 0.0000 0.0000 0.0383 0.0383 0.0383 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 -0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 'X-RAY DIFFRACTION' 10 ? refined 0.0000 0.0000 0.0000 0.0383 0.0383 0.0383 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 -0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 'X-RAY DIFFRACTION' 11 ? refined 0.0000 0.0000 0.0000 0.0383 0.0383 0.0383 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 -0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 'X-RAY DIFFRACTION' 12 ? refined 0.0000 0.0000 0.0000 0.0383 0.0383 0.0383 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 -0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 'X-RAY DIFFRACTION' 13 ? refined 0.0000 0.0000 0.0000 0.0383 0.0383 0.0383 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 -0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 'X-RAY DIFFRACTION' 14 ? refined 0.0000 0.0000 0.0000 0.0383 0.0383 0.0383 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 -0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 1 A 142 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 B 1 B 10 ? . . . . ? 'X-RAY DIFFRACTION' 3 3 C 11 C 18 ? . . . . ? 'X-RAY DIFFRACTION' 4 4 A 1 A 153 ? . . . . ? 'X-RAY DIFFRACTION' 5 5 A 1 A 154 ? . . . . ? 'X-RAY DIFFRACTION' 6 6 A 1 A 248 ? . . . . ? 'X-RAY DIFFRACTION' 7 7 A 1 A 156 ? . . . . ? 'X-RAY DIFFRACTION' 8 8 A 1 A 142 ? . . . . ? 'X-RAY DIFFRACTION' 9 9 B 1 B 10 ? . . . . ? 'X-RAY DIFFRACTION' 10 10 C 11 C 18 ? . . . . ? 'X-RAY DIFFRACTION' 11 11 A 1 A 153 ? . . . . ? 'X-RAY DIFFRACTION' 12 12 A 1 A 154 ? . . . . ? 'X-RAY DIFFRACTION' 13 13 A 1 A 248 ? . . . . ? 'X-RAY DIFFRACTION' 14 14 A 1 A 156 ? . . . . ? # _pdbx_phasing_dm.entry_id 3M7K _pdbx_phasing_dm.fom_acentric 0.800 _pdbx_phasing_dm.fom_centric 0.820 _pdbx_phasing_dm.fom 0.810 _pdbx_phasing_dm.reflns_acentric 4077 _pdbx_phasing_dm.reflns_centric 789 _pdbx_phasing_dm.reflns 4866 # loop_ _pdbx_phasing_dm_shell.d_res_high _pdbx_phasing_dm_shell.d_res_low _pdbx_phasing_dm_shell.delta_phi_final _pdbx_phasing_dm_shell.delta_phi_initial _pdbx_phasing_dm_shell.fom_acentric _pdbx_phasing_dm_shell.fom_centric _pdbx_phasing_dm_shell.fom _pdbx_phasing_dm_shell.reflns_acentric _pdbx_phasing_dm_shell.reflns_centric _pdbx_phasing_dm_shell.reflns 8.600 19.603 ? ? 0.920 0.910 0.910 142 92 234 5.400 8.600 ? ? 0.900 0.880 0.890 533 155 688 4.300 5.400 ? ? 0.880 0.810 0.870 692 145 837 3.800 4.300 ? ? 0.860 0.800 0.850 711 119 830 3.200 3.800 ? ? 0.770 0.810 0.780 1257 186 1443 3.000 3.200 ? ? 0.650 0.640 0.650 742 92 834 # _phasing.method MIR # loop_ _phasing_MIR_der.id _phasing_MIR_der.d_res_high _phasing_MIR_der.d_res_low _phasing_MIR_der.der_set_id _phasing_MIR_der.native_set_id 1 . . 1 . 2 . . 1 . 3 . . 1 . # loop_ _phasing_MIR_der_site.id _phasing_MIR_der_site.der_id _phasing_MIR_der_site.atom_type_symbol _phasing_MIR_der_site.occupancy _phasing_MIR_der_site.fract_x _phasing_MIR_der_site.fract_y _phasing_MIR_der_site.fract_z _phasing_MIR_der_site.B_iso _phasing_MIR_der_site.details 1 1 Pt 0.5189 0.3362 0.3902 0.0656 48.6890 ? 1 2 Pt 0.6061 0.0481 0.3321 0.1339 60.0000 ? 1 3 Pt 0.2962 0.8863 0.3331 0.1511 53.9088 ? 2 1 Pt 0.3802 0.3485 0.3851 0.0600 60.0000 ? 2 2 Pt 0.1256 0.6648 0.3342 0.1492 1.0000 ? 2 3 Pt 0.0211 0.8179 0.3302 0.1589 1.0000 ? 3 1 Pt 0.3106 0.3587 0.3927 0.0537 35.2596 ? 4 1 Hg 0.3521 0.8668 0.1511 0.0095 36.1292 ? 5 1 W 0.0895 0.9512 0.1632 0.0075 5.0000 ? # _phasing_set.id 1 _phasing_set.pdbx_d_res_high . _phasing_set.pdbx_d_res_low . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 EDO C1 C N N 231 EDO O1 O N N 232 EDO C2 C N N 233 EDO O2 O N N 234 EDO H11 H N N 235 EDO H12 H N N 236 EDO HO1 H N N 237 EDO H21 H N N 238 EDO H22 H N N 239 EDO HO2 H N N 240 GLN N N N N 241 GLN CA C N S 242 GLN C C N N 243 GLN O O N N 244 GLN CB C N N 245 GLN CG C N N 246 GLN CD C N N 247 GLN OE1 O N N 248 GLN NE2 N N N 249 GLN OXT O N N 250 GLN H H N N 251 GLN H2 H N N 252 GLN HA H N N 253 GLN HB2 H N N 254 GLN HB3 H N N 255 GLN HG2 H N N 256 GLN HG3 H N N 257 GLN HE21 H N N 258 GLN HE22 H N N 259 GLN HXT H N N 260 GLU N N N N 261 GLU CA C N S 262 GLU C C N N 263 GLU O O N N 264 GLU CB C N N 265 GLU CG C N N 266 GLU CD C N N 267 GLU OE1 O N N 268 GLU OE2 O N N 269 GLU OXT O N N 270 GLU H H N N 271 GLU H2 H N N 272 GLU HA H N N 273 GLU HB2 H N N 274 GLU HB3 H N N 275 GLU HG2 H N N 276 GLU HG3 H N N 277 GLU HE2 H N N 278 GLU HXT H N N 279 GLY N N N N 280 GLY CA C N N 281 GLY C C N N 282 GLY O O N N 283 GLY OXT O N N 284 GLY H H N N 285 GLY H2 H N N 286 GLY HA2 H N N 287 GLY HA3 H N N 288 GLY HXT H N N 289 HIS N N N N 290 HIS CA C N S 291 HIS C C N N 292 HIS O O N N 293 HIS CB C N N 294 HIS CG C Y N 295 HIS ND1 N Y N 296 HIS CD2 C Y N 297 HIS CE1 C Y N 298 HIS NE2 N Y N 299 HIS OXT O N N 300 HIS H H N N 301 HIS H2 H N N 302 HIS HA H N N 303 HIS HB2 H N N 304 HIS HB3 H N N 305 HIS HD1 H N N 306 HIS HD2 H N N 307 HIS HE1 H N N 308 HIS HE2 H N N 309 HIS HXT H N N 310 HOH O O N N 311 HOH H1 H N N 312 HOH H2 H N N 313 ILE N N N N 314 ILE CA C N S 315 ILE C C N N 316 ILE O O N N 317 ILE CB C N S 318 ILE CG1 C N N 319 ILE CG2 C N N 320 ILE CD1 C N N 321 ILE OXT O N N 322 ILE H H N N 323 ILE H2 H N N 324 ILE HA H N N 325 ILE HB H N N 326 ILE HG12 H N N 327 ILE HG13 H N N 328 ILE HG21 H N N 329 ILE HG22 H N N 330 ILE HG23 H N N 331 ILE HD11 H N N 332 ILE HD12 H N N 333 ILE HD13 H N N 334 ILE HXT H N N 335 LEU N N N N 336 LEU CA C N S 337 LEU C C N N 338 LEU O O N N 339 LEU CB C N N 340 LEU CG C N N 341 LEU CD1 C N N 342 LEU CD2 C N N 343 LEU OXT O N N 344 LEU H H N N 345 LEU H2 H N N 346 LEU HA H N N 347 LEU HB2 H N N 348 LEU HB3 H N N 349 LEU HG H N N 350 LEU HD11 H N N 351 LEU HD12 H N N 352 LEU HD13 H N N 353 LEU HD21 H N N 354 LEU HD22 H N N 355 LEU HD23 H N N 356 LEU HXT H N N 357 LYS N N N N 358 LYS CA C N S 359 LYS C C N N 360 LYS O O N N 361 LYS CB C N N 362 LYS CG C N N 363 LYS CD C N N 364 LYS CE C N N 365 LYS NZ N N N 366 LYS OXT O N N 367 LYS H H N N 368 LYS H2 H N N 369 LYS HA H N N 370 LYS HB2 H N N 371 LYS HB3 H N N 372 LYS HG2 H N N 373 LYS HG3 H N N 374 LYS HD2 H N N 375 LYS HD3 H N N 376 LYS HE2 H N N 377 LYS HE3 H N N 378 LYS HZ1 H N N 379 LYS HZ2 H N N 380 LYS HZ3 H N N 381 LYS HXT H N N 382 MET N N N N 383 MET CA C N S 384 MET C C N N 385 MET O O N N 386 MET CB C N N 387 MET CG C N N 388 MET SD S N N 389 MET CE C N N 390 MET OXT O N N 391 MET H H N N 392 MET H2 H N N 393 MET HA H N N 394 MET HB2 H N N 395 MET HB3 H N N 396 MET HG2 H N N 397 MET HG3 H N N 398 MET HE1 H N N 399 MET HE2 H N N 400 MET HE3 H N N 401 MET HXT H N N 402 MG MG MG N N 403 NA NA NA N N 404 PHE N N N N 405 PHE CA C N S 406 PHE C C N N 407 PHE O O N N 408 PHE CB C N N 409 PHE CG C Y N 410 PHE CD1 C Y N 411 PHE CD2 C Y N 412 PHE CE1 C Y N 413 PHE CE2 C Y N 414 PHE CZ C Y N 415 PHE OXT O N N 416 PHE H H N N 417 PHE H2 H N N 418 PHE HA H N N 419 PHE HB2 H N N 420 PHE HB3 H N N 421 PHE HD1 H N N 422 PHE HD2 H N N 423 PHE HE1 H N N 424 PHE HE2 H N N 425 PHE HZ H N N 426 PHE HXT H N N 427 PRO N N N N 428 PRO CA C N S 429 PRO C C N N 430 PRO O O N N 431 PRO CB C N N 432 PRO CG C N N 433 PRO CD C N N 434 PRO OXT O N N 435 PRO H H N N 436 PRO HA H N N 437 PRO HB2 H N N 438 PRO HB3 H N N 439 PRO HG2 H N N 440 PRO HG3 H N N 441 PRO HD2 H N N 442 PRO HD3 H N N 443 PRO HXT H N N 444 PT PT PT N N 445 SER N N N N 446 SER CA C N S 447 SER C C N N 448 SER O O N N 449 SER CB C N N 450 SER OG O N N 451 SER OXT O N N 452 SER H H N N 453 SER H2 H N N 454 SER HA H N N 455 SER HB2 H N N 456 SER HB3 H N N 457 SER HG H N N 458 SER HXT H N N 459 SO4 S S N N 460 SO4 O1 O N N 461 SO4 O2 O N N 462 SO4 O3 O N N 463 SO4 O4 O N N 464 THR N N N N 465 THR CA C N S 466 THR C C N N 467 THR O O N N 468 THR CB C N R 469 THR OG1 O N N 470 THR CG2 C N N 471 THR OXT O N N 472 THR H H N N 473 THR H2 H N N 474 THR HA H N N 475 THR HB H N N 476 THR HG1 H N N 477 THR HG21 H N N 478 THR HG22 H N N 479 THR HG23 H N N 480 THR HXT H N N 481 TRP N N N N 482 TRP CA C N S 483 TRP C C N N 484 TRP O O N N 485 TRP CB C N N 486 TRP CG C Y N 487 TRP CD1 C Y N 488 TRP CD2 C Y N 489 TRP NE1 N Y N 490 TRP CE2 C Y N 491 TRP CE3 C Y N 492 TRP CZ2 C Y N 493 TRP CZ3 C Y N 494 TRP CH2 C Y N 495 TRP OXT O N N 496 TRP H H N N 497 TRP H2 H N N 498 TRP HA H N N 499 TRP HB2 H N N 500 TRP HB3 H N N 501 TRP HD1 H N N 502 TRP HE1 H N N 503 TRP HE3 H N N 504 TRP HZ2 H N N 505 TRP HZ3 H N N 506 TRP HH2 H N N 507 TRP HXT H N N 508 TYR N N N N 509 TYR CA C N S 510 TYR C C N N 511 TYR O O N N 512 TYR CB C N N 513 TYR CG C Y N 514 TYR CD1 C Y N 515 TYR CD2 C Y N 516 TYR CE1 C Y N 517 TYR CE2 C Y N 518 TYR CZ C Y N 519 TYR OH O N N 520 TYR OXT O N N 521 TYR H H N N 522 TYR H2 H N N 523 TYR HA H N N 524 TYR HB2 H N N 525 TYR HB3 H N N 526 TYR HD1 H N N 527 TYR HD2 H N N 528 TYR HE1 H N N 529 TYR HE2 H N N 530 TYR HH H N N 531 TYR HXT H N N 532 VAL N N N N 533 VAL CA C N S 534 VAL C C N N 535 VAL O O N N 536 VAL CB C N N 537 VAL CG1 C N N 538 VAL CG2 C N N 539 VAL OXT O N N 540 VAL H H N N 541 VAL H2 H N N 542 VAL HA H N N 543 VAL HB H N N 544 VAL HG11 H N N 545 VAL HG12 H N N 546 VAL HG13 H N N 547 VAL HG21 H N N 548 VAL HG22 H N N 549 VAL HG23 H N N 550 VAL HXT H N N 551 ZN ZN ZN N N 552 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 EDO C1 O1 sing N N 232 EDO C1 C2 sing N N 233 EDO C1 H11 sing N N 234 EDO C1 H12 sing N N 235 EDO O1 HO1 sing N N 236 EDO C2 O2 sing N N 237 EDO C2 H21 sing N N 238 EDO C2 H22 sing N N 239 EDO O2 HO2 sing N N 240 GLN N CA sing N N 241 GLN N H sing N N 242 GLN N H2 sing N N 243 GLN CA C sing N N 244 GLN CA CB sing N N 245 GLN CA HA sing N N 246 GLN C O doub N N 247 GLN C OXT sing N N 248 GLN CB CG sing N N 249 GLN CB HB2 sing N N 250 GLN CB HB3 sing N N 251 GLN CG CD sing N N 252 GLN CG HG2 sing N N 253 GLN CG HG3 sing N N 254 GLN CD OE1 doub N N 255 GLN CD NE2 sing N N 256 GLN NE2 HE21 sing N N 257 GLN NE2 HE22 sing N N 258 GLN OXT HXT sing N N 259 GLU N CA sing N N 260 GLU N H sing N N 261 GLU N H2 sing N N 262 GLU CA C sing N N 263 GLU CA CB sing N N 264 GLU CA HA sing N N 265 GLU C O doub N N 266 GLU C OXT sing N N 267 GLU CB CG sing N N 268 GLU CB HB2 sing N N 269 GLU CB HB3 sing N N 270 GLU CG CD sing N N 271 GLU CG HG2 sing N N 272 GLU CG HG3 sing N N 273 GLU CD OE1 doub N N 274 GLU CD OE2 sing N N 275 GLU OE2 HE2 sing N N 276 GLU OXT HXT sing N N 277 GLY N CA sing N N 278 GLY N H sing N N 279 GLY N H2 sing N N 280 GLY CA C sing N N 281 GLY CA HA2 sing N N 282 GLY CA HA3 sing N N 283 GLY C O doub N N 284 GLY C OXT sing N N 285 GLY OXT HXT sing N N 286 HIS N CA sing N N 287 HIS N H sing N N 288 HIS N H2 sing N N 289 HIS CA C sing N N 290 HIS CA CB sing N N 291 HIS CA HA sing N N 292 HIS C O doub N N 293 HIS C OXT sing N N 294 HIS CB CG sing N N 295 HIS CB HB2 sing N N 296 HIS CB HB3 sing N N 297 HIS CG ND1 sing Y N 298 HIS CG CD2 doub Y N 299 HIS ND1 CE1 doub Y N 300 HIS ND1 HD1 sing N N 301 HIS CD2 NE2 sing Y N 302 HIS CD2 HD2 sing N N 303 HIS CE1 NE2 sing Y N 304 HIS CE1 HE1 sing N N 305 HIS NE2 HE2 sing N N 306 HIS OXT HXT sing N N 307 HOH O H1 sing N N 308 HOH O H2 sing N N 309 ILE N CA sing N N 310 ILE N H sing N N 311 ILE N H2 sing N N 312 ILE CA C sing N N 313 ILE CA CB sing N N 314 ILE CA HA sing N N 315 ILE C O doub N N 316 ILE C OXT sing N N 317 ILE CB CG1 sing N N 318 ILE CB CG2 sing N N 319 ILE CB HB sing N N 320 ILE CG1 CD1 sing N N 321 ILE CG1 HG12 sing N N 322 ILE CG1 HG13 sing N N 323 ILE CG2 HG21 sing N N 324 ILE CG2 HG22 sing N N 325 ILE CG2 HG23 sing N N 326 ILE CD1 HD11 sing N N 327 ILE CD1 HD12 sing N N 328 ILE CD1 HD13 sing N N 329 ILE OXT HXT sing N N 330 LEU N CA sing N N 331 LEU N H sing N N 332 LEU N H2 sing N N 333 LEU CA C sing N N 334 LEU CA CB sing N N 335 LEU CA HA sing N N 336 LEU C O doub N N 337 LEU C OXT sing N N 338 LEU CB CG sing N N 339 LEU CB HB2 sing N N 340 LEU CB HB3 sing N N 341 LEU CG CD1 sing N N 342 LEU CG CD2 sing N N 343 LEU CG HG sing N N 344 LEU CD1 HD11 sing N N 345 LEU CD1 HD12 sing N N 346 LEU CD1 HD13 sing N N 347 LEU CD2 HD21 sing N N 348 LEU CD2 HD22 sing N N 349 LEU CD2 HD23 sing N N 350 LEU OXT HXT sing N N 351 LYS N CA sing N N 352 LYS N H sing N N 353 LYS N H2 sing N N 354 LYS CA C sing N N 355 LYS CA CB sing N N 356 LYS CA HA sing N N 357 LYS C O doub N N 358 LYS C OXT sing N N 359 LYS CB CG sing N N 360 LYS CB HB2 sing N N 361 LYS CB HB3 sing N N 362 LYS CG CD sing N N 363 LYS CG HG2 sing N N 364 LYS CG HG3 sing N N 365 LYS CD CE sing N N 366 LYS CD HD2 sing N N 367 LYS CD HD3 sing N N 368 LYS CE NZ sing N N 369 LYS CE HE2 sing N N 370 LYS CE HE3 sing N N 371 LYS NZ HZ1 sing N N 372 LYS NZ HZ2 sing N N 373 LYS NZ HZ3 sing N N 374 LYS OXT HXT sing N N 375 MET N CA sing N N 376 MET N H sing N N 377 MET N H2 sing N N 378 MET CA C sing N N 379 MET CA CB sing N N 380 MET CA HA sing N N 381 MET C O doub N N 382 MET C OXT sing N N 383 MET CB CG sing N N 384 MET CB HB2 sing N N 385 MET CB HB3 sing N N 386 MET CG SD sing N N 387 MET CG HG2 sing N N 388 MET CG HG3 sing N N 389 MET SD CE sing N N 390 MET CE HE1 sing N N 391 MET CE HE2 sing N N 392 MET CE HE3 sing N N 393 MET OXT HXT sing N N 394 PHE N CA sing N N 395 PHE N H sing N N 396 PHE N H2 sing N N 397 PHE CA C sing N N 398 PHE CA CB sing N N 399 PHE CA HA sing N N 400 PHE C O doub N N 401 PHE C OXT sing N N 402 PHE CB CG sing N N 403 PHE CB HB2 sing N N 404 PHE CB HB3 sing N N 405 PHE CG CD1 doub Y N 406 PHE CG CD2 sing Y N 407 PHE CD1 CE1 sing Y N 408 PHE CD1 HD1 sing N N 409 PHE CD2 CE2 doub Y N 410 PHE CD2 HD2 sing N N 411 PHE CE1 CZ doub Y N 412 PHE CE1 HE1 sing N N 413 PHE CE2 CZ sing Y N 414 PHE CE2 HE2 sing N N 415 PHE CZ HZ sing N N 416 PHE OXT HXT sing N N 417 PRO N CA sing N N 418 PRO N CD sing N N 419 PRO N H sing N N 420 PRO CA C sing N N 421 PRO CA CB sing N N 422 PRO CA HA sing N N 423 PRO C O doub N N 424 PRO C OXT sing N N 425 PRO CB CG sing N N 426 PRO CB HB2 sing N N 427 PRO CB HB3 sing N N 428 PRO CG CD sing N N 429 PRO CG HG2 sing N N 430 PRO CG HG3 sing N N 431 PRO CD HD2 sing N N 432 PRO CD HD3 sing N N 433 PRO OXT HXT sing N N 434 SER N CA sing N N 435 SER N H sing N N 436 SER N H2 sing N N 437 SER CA C sing N N 438 SER CA CB sing N N 439 SER CA HA sing N N 440 SER C O doub N N 441 SER C OXT sing N N 442 SER CB OG sing N N 443 SER CB HB2 sing N N 444 SER CB HB3 sing N N 445 SER OG HG sing N N 446 SER OXT HXT sing N N 447 SO4 S O1 doub N N 448 SO4 S O2 doub N N 449 SO4 S O3 sing N N 450 SO4 S O4 sing N N 451 THR N CA sing N N 452 THR N H sing N N 453 THR N H2 sing N N 454 THR CA C sing N N 455 THR CA CB sing N N 456 THR CA HA sing N N 457 THR C O doub N N 458 THR C OXT sing N N 459 THR CB OG1 sing N N 460 THR CB CG2 sing N N 461 THR CB HB sing N N 462 THR OG1 HG1 sing N N 463 THR CG2 HG21 sing N N 464 THR CG2 HG22 sing N N 465 THR CG2 HG23 sing N N 466 THR OXT HXT sing N N 467 TRP N CA sing N N 468 TRP N H sing N N 469 TRP N H2 sing N N 470 TRP CA C sing N N 471 TRP CA CB sing N N 472 TRP CA HA sing N N 473 TRP C O doub N N 474 TRP C OXT sing N N 475 TRP CB CG sing N N 476 TRP CB HB2 sing N N 477 TRP CB HB3 sing N N 478 TRP CG CD1 doub Y N 479 TRP CG CD2 sing Y N 480 TRP CD1 NE1 sing Y N 481 TRP CD1 HD1 sing N N 482 TRP CD2 CE2 doub Y N 483 TRP CD2 CE3 sing Y N 484 TRP NE1 CE2 sing Y N 485 TRP NE1 HE1 sing N N 486 TRP CE2 CZ2 sing Y N 487 TRP CE3 CZ3 doub Y N 488 TRP CE3 HE3 sing N N 489 TRP CZ2 CH2 doub Y N 490 TRP CZ2 HZ2 sing N N 491 TRP CZ3 CH2 sing Y N 492 TRP CZ3 HZ3 sing N N 493 TRP CH2 HH2 sing N N 494 TRP OXT HXT sing N N 495 TYR N CA sing N N 496 TYR N H sing N N 497 TYR N H2 sing N N 498 TYR CA C sing N N 499 TYR CA CB sing N N 500 TYR CA HA sing N N 501 TYR C O doub N N 502 TYR C OXT sing N N 503 TYR CB CG sing N N 504 TYR CB HB2 sing N N 505 TYR CB HB3 sing N N 506 TYR CG CD1 doub Y N 507 TYR CG CD2 sing Y N 508 TYR CD1 CE1 sing Y N 509 TYR CD1 HD1 sing N N 510 TYR CD2 CE2 doub Y N 511 TYR CD2 HD2 sing N N 512 TYR CE1 CZ doub Y N 513 TYR CE1 HE1 sing N N 514 TYR CE2 CZ sing Y N 515 TYR CE2 HE2 sing N N 516 TYR CZ OH sing N N 517 TYR OH HH sing N N 518 TYR OXT HXT sing N N 519 VAL N CA sing N N 520 VAL N H sing N N 521 VAL N H2 sing N N 522 VAL CA C sing N N 523 VAL CA CB sing N N 524 VAL CA HA sing N N 525 VAL C O doub N N 526 VAL C OXT sing N N 527 VAL CB CG1 sing N N 528 VAL CB CG2 sing N N 529 VAL CB HB sing N N 530 VAL CG1 HG11 sing N N 531 VAL CG1 HG12 sing N N 532 VAL CG1 HG13 sing N N 533 VAL CG2 HG21 sing N N 534 VAL CG2 HG22 sing N N 535 VAL CG2 HG23 sing N N 536 VAL OXT HXT sing N N 537 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3M7K 'double helix' 3M7K 'b-form double helix' 3M7K 'bulge loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 1 1_555 C DC 8 1_555 0.527 -0.235 0.295 1.136 -1.536 0.450 1 B_DG1:DC18_C B 1 ? C 18 ? 19 1 1 B DA 2 1_555 C DT 7 1_555 0.048 -0.439 0.154 -1.942 -4.558 -11.011 2 B_DA2:DT17_C B 2 ? C 17 ? 20 1 1 B DG 3 1_555 C DC 6 1_555 0.203 -0.323 0.129 9.823 -3.500 -5.937 3 B_DG3:DC16_C B 3 ? C 16 ? 19 1 1 B DG 4 1_555 C DC 5 1_555 -0.181 -0.269 0.172 4.382 -5.820 0.072 4 B_DG4:DC15_C B 4 ? C 15 ? 19 1 1 B DC 5 1_555 C DG 4 1_555 0.544 -0.185 0.223 10.899 -11.647 0.319 5 B_DC5:DG14_C B 5 ? C 14 ? 19 1 1 B DT 6 1_555 C DA 2 1_555 0.081 -0.050 0.517 -22.539 12.040 2.281 6 B_DT6:DA12_C B 6 ? C 12 ? 20 1 1 B DT 7 1_555 C DT 1 1_555 2.254 -1.884 0.251 1.540 7.340 9.155 7 B_DT7:DT11_C B 7 ? C 11 ? 16 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 1 1_555 C DC 8 1_555 B DA 2 1_555 C DT 7 1_555 -1.684 -1.191 3.337 0.331 -0.774 32.680 -1.979 3.050 3.347 -1.376 -0.588 32.691 1 BB_DG1DA2:DT17DC18_CC B 1 ? C 18 ? B 2 ? C 17 ? 1 B DA 2 1_555 C DT 7 1_555 B DG 3 1_555 C DC 6 1_555 0.671 -0.047 3.131 1.192 0.666 29.278 -0.230 -1.080 3.153 1.316 -2.356 29.309 2 BB_DA2DG3:DC16DT17_CC B 2 ? C 17 ? B 3 ? C 16 ? 1 B DG 3 1_555 C DC 6 1_555 B DG 4 1_555 C DC 5 1_555 -0.905 0.385 3.387 -4.113 1.728 39.021 0.356 0.832 3.474 2.577 6.133 39.265 3 BB_DG3DG4:DC15DC16_CC B 3 ? C 16 ? B 4 ? C 15 ? 1 B DG 4 1_555 C DC 5 1_555 B DC 5 1_555 C DG 4 1_555 0.591 -0.253 3.165 -0.435 2.743 36.077 -0.780 -1.011 3.131 4.420 0.701 36.181 4 BB_DG4DC5:DG14DC15_CC B 4 ? C 15 ? B 5 ? C 14 ? 1 B DT 6 1_555 C DA 2 1_555 B DT 7 1_555 C DT 1 1_555 1.182 0.836 3.138 -2.251 11.138 38.989 -0.020 -1.953 3.180 16.271 3.289 40.549 5 BB_DT6DT7:DT11DA12_CC B 6 ? C 12 ? B 7 ? C 11 ? # _atom_sites.entry_id 3M7K _atom_sites.fract_transf_matrix[1][1] 0.026962 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008701 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008747 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C MG N NA O P PT S ZN # loop_