HEADER HYDROLASE REGULATOR 19-MAR-10 3M91 TITLE CRYSTAL STRUCTURE OF THE PROKARYOTIC UBIQUITIN-LIKE PROTEIN (PUP) TITLE 2 COMPLEXED WITH THE AMINO TERMINAL COILED COIL OF THE MYCOBACTERIUM TITLE 3 TUBERCULOSIS PROTEASOMAL ATPASE MPA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEASOME-ASSOCIATED ATPASE; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: COIL COIL DOMAIN (UNP RESIDUES:46-96); COMPND 5 SYNONYM: AAA ATPASE FORMING RING-SHAPED COMPLEXES, ARC, MYCOBACTERIAL COMPND 6 PROTEASOME ATPASE; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: PROKARYOTIC UBIQUITIN-LIKE PROTEIN PUP; COMPND 10 CHAIN: B, D; COMPND 11 FRAGMENT: UNP RESIDUES:21-64; COMPND 12 SYNONYM: BACTERIAL UBIQUITIN-LIKE MODIFIER; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 STRAIN: H37RV; SOURCE 5 GENE: MPA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-15B; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 13 ORGANISM_TAXID: 83332; SOURCE 14 STRAIN: H37RV; SOURCE 15 GENE: PUP; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET-15B KEYWDS COIL COIL ALPHA HELIX, ATP-BINDING, CHAPERONE, NUCLEOTIDE-BINDING, KEYWDS 2 PROTEASOME, S-NITROSYLATION, VIRULENCE, ISOPEPTIDE BOND, UBL KEYWDS 3 CONJUGATION PATHWAY, HYDROLASE REGULATOR EXPDTA X-RAY DIFFRACTION AUTHOR T.WANG,H.LI REVDAT 4 21-FEB-24 3M91 1 REMARK REVDAT 3 17-JUL-19 3M91 1 REMARK REVDAT 2 09-FEB-11 3M91 1 JRNL REVDAT 1 27-OCT-10 3M91 0 JRNL AUTH T.WANG,K.H.DARWIN,H.LI JRNL TITL BINDING-INDUCED FOLDING OF PROKARYOTIC UBIQUITIN-LIKE JRNL TITL 2 PROTEIN ON THE MYCOBACTERIUM PROTEASOMAL ATPASE TARGETS JRNL TITL 3 SUBSTRATES FOR DEGRADATION. JRNL REF NAT.STRUCT.MOL.BIOL. V. 17 1352 2010 JRNL REFN ISSN 1545-9993 JRNL PMID 20953180 JRNL DOI 10.1038/NSMB.1918 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 88.6 REMARK 3 NUMBER OF REFLECTIONS : 18548 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 992 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 735 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 47.58 REMARK 3 BIN R VALUE (WORKING SET) : 0.3900 REMARK 3 BIN FREE R VALUE SET COUNT : 33 REMARK 3 BIN FREE R VALUE : 0.4900 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1210 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 77 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.18000 REMARK 3 B22 (A**2) : 3.36000 REMARK 3 B33 (A**2) : -2.47000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.62000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.121 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.120 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.077 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.719 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1223 ; 0.027 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1638 ; 1.992 ; 1.987 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 148 ; 5.433 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 76 ;36.376 ;25.526 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 252 ;18.031 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;20.832 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 194 ; 0.148 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 912 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 755 ; 1.511 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1202 ; 3.045 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 468 ; 5.329 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 436 ; 9.577 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 2 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 52 A 96 5 REMARK 3 1 C 52 C 96 5 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 180 ; 0.06 ; 0.50 REMARK 3 LOOSE POSITIONAL 1 A (A): 185 ; 0.35 ; 5.00 REMARK 3 MEDIUM THERMAL 1 A (A**2): 180 ; 0.44 ; 2.00 REMARK 3 LOOSE THERMAL 1 A (A**2): 185 ; 0.72 ; 10.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : B D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 B 21 B 51 5 REMARK 3 1 D 21 D 51 5 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 2 B (A): 123 ; 0.07 ; 0.50 REMARK 3 LOOSE POSITIONAL 2 B (A): 124 ; 0.16 ; 5.00 REMARK 3 MEDIUM THERMAL 2 B (A**2): 123 ; 0.46 ; 2.00 REMARK 3 LOOSE THERMAL 2 B (A**2): 124 ; 0.73 ; 10.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 52 A 96 REMARK 3 ORIGIN FOR THE GROUP (A): -9.9671-788.9600 -22.9011 REMARK 3 T TENSOR REMARK 3 T11: 0.1526 T22: 0.2493 REMARK 3 T33: 0.1024 T12: -0.0462 REMARK 3 T13: -0.0176 T23: -0.0790 REMARK 3 L TENSOR REMARK 3 L11: 1.1783 L22: 0.5524 REMARK 3 L33: 3.4607 L12: 0.1980 REMARK 3 L13: -0.4875 L23: -0.8755 REMARK 3 S TENSOR REMARK 3 S11: -0.0621 S12: 0.3306 S13: -0.2068 REMARK 3 S21: -0.1295 S22: 0.1044 S23: 0.0634 REMARK 3 S31: 0.2866 S32: 0.0472 S33: -0.0423 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 21 B 51 REMARK 3 ORIGIN FOR THE GROUP (A): -2.4109-787.7007 -8.5026 REMARK 3 T TENSOR REMARK 3 T11: 0.1139 T22: 0.2257 REMARK 3 T33: 0.1613 T12: 0.0005 REMARK 3 T13: 0.0150 T23: -0.0523 REMARK 3 L TENSOR REMARK 3 L11: 0.7056 L22: 2.8728 REMARK 3 L33: 11.2168 L12: 0.2589 REMARK 3 L13: 0.5555 L23: -5.1887 REMARK 3 S TENSOR REMARK 3 S11: -0.2243 S12: 0.1737 S13: -0.2114 REMARK 3 S21: -0.0338 S22: 0.2292 S23: -0.2292 REMARK 3 S31: -0.1354 S32: -0.0659 S33: -0.0049 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 52 C 96 REMARK 3 ORIGIN FOR THE GROUP (A): -12.4899-782.2149 -22.9323 REMARK 3 T TENSOR REMARK 3 T11: 0.1579 T22: 0.2408 REMARK 3 T33: 0.1053 T12: -0.0523 REMARK 3 T13: 0.0054 T23: 0.0687 REMARK 3 L TENSOR REMARK 3 L11: 1.1307 L22: 0.6477 REMARK 3 L33: 4.4551 L12: 0.1497 REMARK 3 L13: 0.7333 L23: 0.9999 REMARK 3 S TENSOR REMARK 3 S11: -0.0596 S12: 0.3087 S13: 0.1638 REMARK 3 S21: -0.1527 S22: 0.1081 S23: -0.0320 REMARK 3 S31: -0.3218 S32: -0.0058 S33: -0.0485 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 21 D 51 REMARK 3 ORIGIN FOR THE GROUP (A): -20.0366-783.3813 -8.3666 REMARK 3 T TENSOR REMARK 3 T11: 0.1044 T22: 0.2530 REMARK 3 T33: 0.1521 T12: 0.0076 REMARK 3 T13: -0.0194 T23: 0.0553 REMARK 3 L TENSOR REMARK 3 L11: 0.6499 L22: 2.3028 REMARK 3 L33: 8.6416 L12: 0.1861 REMARK 3 L13: -0.6667 L23: 3.9355 REMARK 3 S TENSOR REMARK 3 S11: -0.1775 S12: 0.1866 S13: 0.2209 REMARK 3 S21: -0.0104 S22: 0.2226 S23: 0.2119 REMARK 3 S31: 0.1001 S32: -0.0548 S33: -0.0451 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3M91 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-MAR-10. REMARK 100 THE DEPOSITION ID IS D_1000058260. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0809 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19540 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 88.5 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : 0.07600 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 45.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.56000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM ACETATE 16% 1,4-DIOXANE, REMARK 280 250MM SODIUM CHLORIDE, 2MM MAGNESIUM CHLORIDE WITH PROTEASE REMARK 280 INHIBITOR, PH 4.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 14.04650 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -53.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 46 REMARK 465 HIS A 47 REMARK 465 ALA A 48 REMARK 465 PRO A 49 REMARK 465 THR A 50 REMARK 465 ARG A 51 REMARK 465 GLU B 52 REMARK 465 ASP B 53 REMARK 465 PHE B 54 REMARK 465 VAL B 55 REMARK 465 ARG B 56 REMARK 465 ALA B 57 REMARK 465 TYR B 58 REMARK 465 VAL B 59 REMARK 465 GLN B 60 REMARK 465 LYS B 61 REMARK 465 GLY B 62 REMARK 465 GLY B 63 REMARK 465 GLU B 64 REMARK 465 SER C 46 REMARK 465 HIS C 47 REMARK 465 ALA C 48 REMARK 465 PRO C 49 REMARK 465 THR C 50 REMARK 465 ARG C 51 REMARK 465 GLU D 52 REMARK 465 ASP D 53 REMARK 465 PHE D 54 REMARK 465 VAL D 55 REMARK 465 ARG D 56 REMARK 465 ALA D 57 REMARK 465 TYR D 58 REMARK 465 VAL D 59 REMARK 465 GLN D 60 REMARK 465 LYS D 61 REMARK 465 GLY D 62 REMARK 465 GLY D 63 REMARK 465 GLU D 64 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 29 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG B 29 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ARG D 29 NE - CZ - NH1 ANGL. DEV. = 5.3 DEGREES REMARK 500 ARG D 29 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ASN D 50 CB - CA - C ANGL. DEV. = 17.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL DBREF 3M91 A 46 96 UNP P63345 MPA_MYCTU 46 96 DBREF 3M91 B 21 64 UNP O33246 PUP_MYCTU 21 64 DBREF 3M91 C 46 96 UNP P63345 MPA_MYCTU 46 96 DBREF 3M91 D 21 64 UNP O33246 PUP_MYCTU 21 64 SEQRES 1 A 51 SER HIS ALA PRO THR ARG SER ALA ARG ASP ILE HIS GLN SEQRES 2 A 51 LEU GLU ALA ARG ILE ASP SER LEU ALA ALA ARG ASN SER SEQRES 3 A 51 LYS LEU MET GLU THR LEU LYS GLU ALA ARG GLN GLN LEU SEQRES 4 A 51 LEU ALA LEU ARG GLU GLU VAL ASP ARG LEU GLY GLN SEQRES 1 B 44 SER THR ALA ALA GLY GLN GLU ARG ARG GLU LYS LEU THR SEQRES 2 B 44 GLU GLU THR ASP ASP LEU LEU ASP GLU ILE ASP ASP VAL SEQRES 3 B 44 LEU GLU GLU ASN ALA GLU ASP PHE VAL ARG ALA TYR VAL SEQRES 4 B 44 GLN LYS GLY GLY GLU SEQRES 1 C 51 SER HIS ALA PRO THR ARG SER ALA ARG ASP ILE HIS GLN SEQRES 2 C 51 LEU GLU ALA ARG ILE ASP SER LEU ALA ALA ARG ASN SER SEQRES 3 C 51 LYS LEU MET GLU THR LEU LYS GLU ALA ARG GLN GLN LEU SEQRES 4 C 51 LEU ALA LEU ARG GLU GLU VAL ASP ARG LEU GLY GLN SEQRES 1 D 44 SER THR ALA ALA GLY GLN GLU ARG ARG GLU LYS LEU THR SEQRES 2 D 44 GLU GLU THR ASP ASP LEU LEU ASP GLU ILE ASP ASP VAL SEQRES 3 D 44 LEU GLU GLU ASN ALA GLU ASP PHE VAL ARG ALA TYR VAL SEQRES 4 D 44 GLN LYS GLY GLY GLU FORMUL 5 HOH *77(H2 O) HELIX 1 1 SER A 52 GLY A 95 1 44 HELIX 2 2 THR B 22 ASN B 50 1 29 HELIX 3 3 SER C 52 GLN C 96 1 45 HELIX 4 4 THR D 22 ALA D 51 1 30 CRYST1 44.752 28.093 96.233 90.00 103.43 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022345 0.000000 0.005336 0.00000 SCALE2 0.000000 0.035596 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010684 0.00000