data_3M95 # _entry.id 3M95 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3M95 pdb_00003m95 10.2210/pdb3m95/pdb RCSB RCSB058264 ? ? WWPDB D_1000058264 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3M95 _pdbx_database_status.recvd_initial_deposition_date 2010-03-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Teng, Y.-B.' 1 'Hu, C.' 2 'Zhang, X.' 3 'Jiang, Y.L.' 4 'Hu, H.-X.' 5 'Zhou, C.Z.' 6 # _citation.id primary _citation.title 'Structure of autophagy-related protein Atg8 from the silkworm Bombyx mori' _citation.journal_abbrev 'Acta Crystallogr.,Sect.F' _citation.journal_volume 66 _citation.page_first 787 _citation.page_last 790 _citation.year 2010 _citation.journal_id_ASTM ? _citation.country DK _citation.journal_id_ISSN 1744-3091 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20606273 _citation.pdbx_database_id_DOI 10.1107/S1744309110018464 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hu, C.' 1 ? primary 'Zhang, X.' 2 ? primary 'Teng, Y.-B.' 3 ? primary 'Hu, H.-X.' 4 ? primary 'Li, W.-F.' 5 ? # _cell.entry_id 3M95 _cell.length_a 96.768 _cell.length_b 96.768 _cell.length_c 44.309 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3M95 _symmetry.space_group_name_H-M 'P 41' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Autophagy related protein Atg8' 14945.064 2 ? ? ? ? 2 water nat water 18.015 59 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Atg8, Gamma-aminobutyric acid type A receptor-associated protein, Gaba receptor protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MHHHHHHGMKFQYKEEHSFEKRKAEGEKIRRKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRP EDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYGN ; _entity_poly.pdbx_seq_one_letter_code_can ;MHHHHHHGMKFQYKEEHSFEKRKAEGEKIRRKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRP EDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYGN ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 GLY n 1 9 MET n 1 10 LYS n 1 11 PHE n 1 12 GLN n 1 13 TYR n 1 14 LYS n 1 15 GLU n 1 16 GLU n 1 17 HIS n 1 18 SER n 1 19 PHE n 1 20 GLU n 1 21 LYS n 1 22 ARG n 1 23 LYS n 1 24 ALA n 1 25 GLU n 1 26 GLY n 1 27 GLU n 1 28 LYS n 1 29 ILE n 1 30 ARG n 1 31 ARG n 1 32 LYS n 1 33 TYR n 1 34 PRO n 1 35 ASP n 1 36 ARG n 1 37 VAL n 1 38 PRO n 1 39 VAL n 1 40 ILE n 1 41 VAL n 1 42 GLU n 1 43 LYS n 1 44 ALA n 1 45 PRO n 1 46 LYS n 1 47 ALA n 1 48 ARG n 1 49 LEU n 1 50 GLY n 1 51 ASP n 1 52 LEU n 1 53 ASP n 1 54 LYS n 1 55 LYS n 1 56 LYS n 1 57 TYR n 1 58 LEU n 1 59 VAL n 1 60 PRO n 1 61 SER n 1 62 ASP n 1 63 LEU n 1 64 THR n 1 65 VAL n 1 66 GLY n 1 67 GLN n 1 68 PHE n 1 69 TYR n 1 70 PHE n 1 71 LEU n 1 72 ILE n 1 73 ARG n 1 74 LYS n 1 75 ARG n 1 76 ILE n 1 77 HIS n 1 78 LEU n 1 79 ARG n 1 80 PRO n 1 81 GLU n 1 82 ASP n 1 83 ALA n 1 84 LEU n 1 85 PHE n 1 86 PHE n 1 87 PHE n 1 88 VAL n 1 89 ASN n 1 90 ASN n 1 91 VAL n 1 92 ILE n 1 93 PRO n 1 94 PRO n 1 95 THR n 1 96 SER n 1 97 ALA n 1 98 THR n 1 99 MET n 1 100 GLY n 1 101 SER n 1 102 LEU n 1 103 TYR n 1 104 GLN n 1 105 GLU n 1 106 HIS n 1 107 HIS n 1 108 ASP n 1 109 GLU n 1 110 ASP n 1 111 PHE n 1 112 PHE n 1 113 LEU n 1 114 TYR n 1 115 ILE n 1 116 ALA n 1 117 PHE n 1 118 SER n 1 119 ASP n 1 120 GLU n 1 121 ASN n 1 122 VAL n 1 123 TYR n 1 124 GLY n 1 125 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Silk moth' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bombyx mori' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 7091 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pET28a-derived vector' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q2F5R5_BOMMO _struct_ref.pdbx_db_accession Q2F5R5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MKFQYKEEHSFEKRKAEGEKIRRKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFV NNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYGN ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3M95 A 9 ? 125 ? Q2F5R5 1 ? 117 ? 1 117 2 1 3M95 B 9 ? 125 ? Q2F5R5 1 ? 117 ? 1 117 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3M95 MET A 1 ? UNP Q2F5R5 ? ? 'expression tag' -7 1 1 3M95 HIS A 2 ? UNP Q2F5R5 ? ? 'expression tag' -6 2 1 3M95 HIS A 3 ? UNP Q2F5R5 ? ? 'expression tag' -5 3 1 3M95 HIS A 4 ? UNP Q2F5R5 ? ? 'expression tag' -4 4 1 3M95 HIS A 5 ? UNP Q2F5R5 ? ? 'expression tag' -3 5 1 3M95 HIS A 6 ? UNP Q2F5R5 ? ? 'expression tag' -2 6 1 3M95 HIS A 7 ? UNP Q2F5R5 ? ? 'expression tag' -1 7 1 3M95 GLY A 8 ? UNP Q2F5R5 ? ? 'expression tag' 0 8 2 3M95 MET B 1 ? UNP Q2F5R5 ? ? 'expression tag' -7 9 2 3M95 HIS B 2 ? UNP Q2F5R5 ? ? 'expression tag' -6 10 2 3M95 HIS B 3 ? UNP Q2F5R5 ? ? 'expression tag' -5 11 2 3M95 HIS B 4 ? UNP Q2F5R5 ? ? 'expression tag' -4 12 2 3M95 HIS B 5 ? UNP Q2F5R5 ? ? 'expression tag' -3 13 2 3M95 HIS B 6 ? UNP Q2F5R5 ? ? 'expression tag' -2 14 2 3M95 HIS B 7 ? UNP Q2F5R5 ? ? 'expression tag' -1 15 2 3M95 GLY B 8 ? UNP Q2F5R5 ? ? 'expression tag' 0 16 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3M95 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.47 _exptl_crystal.density_percent_sol 64.56 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_details '2.0M Ammonium Sulfate, 0.1M Sodium Citrate, 0.2M Sodium/Potassium Tartrate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 345 mm plate' _diffrn_detector.pdbx_collection_date 2009-01-24 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU300' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 3M95 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 96.7 _reflns.d_resolution_high 2.4 _reflns.number_obs 14385 _reflns.number_all 14385 _reflns.percent_possible_obs 89.6 _reflns.pdbx_Rmerge_I_obs 0.083 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 14.4 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.40 _reflns_shell.d_res_low 2.49 _reflns_shell.percent_possible_all 86.8 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3M95 _refine.ls_number_reflns_obs 14385 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 27.08 _refine.ls_d_res_high 2.40 _refine.ls_percent_reflns_obs 92.63 _refine.ls_R_factor_obs 0.23329 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.23112 _refine.ls_R_factor_R_free 0.27309 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 765 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.929 _refine.correlation_coeff_Fo_to_Fc_free 0.902 _refine.B_iso_mean 48.688 _refine.aniso_B[1][1] 0.19 _refine.aniso_B[2][2] 0.19 _refine.aniso_B[3][3] -0.37 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 1KJT' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.324 _refine.pdbx_overall_ESU_R_Free 0.255 _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1950 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 59 _refine_hist.number_atoms_total 2009 _refine_hist.d_res_high 2.40 _refine_hist.d_res_low 27.08 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.024 0.022 ? 1996 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.941 1.965 ? 2684 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.638 5.000 ? 229 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 31.567 23.048 ? 105 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 21.687 15.000 ? 363 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 21.318 15.000 ? 16 'X-RAY DIFFRACTION' ? r_chiral_restr 0.155 0.200 ? 274 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.009 0.021 ? 1536 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2.028 1.500 ? 1158 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 3.303 2.000 ? 1878 'X-RAY DIFFRACTION' ? r_scbond_it 2.821 3.000 ? 838 'X-RAY DIFFRACTION' ? r_scangle_it 4.419 4.500 ? 806 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.400 _refine_ls_shell.d_res_low 2.463 _refine_ls_shell.number_reflns_R_work 1029 _refine_ls_shell.R_factor_R_work 0.308 _refine_ls_shell.percent_reflns_obs 90.27 _refine_ls_shell.R_factor_R_free 0.283 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 56 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3M95 _struct.title 'Crystal structure of autophagy-related protein Atg8 from the silkworm Bombyx mori' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3M95 _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' _struct_keywords.text 'alpha slash beta, Receptor, TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PHE A 11 ? HIS A 17 ? PHE A 3 HIS A 9 1 ? 7 HELX_P HELX_P2 2 SER A 18 ? TYR A 33 ? SER A 10 TYR A 25 1 ? 16 HELX_P HELX_P3 3 THR A 64 ? ILE A 76 ? THR A 56 ILE A 68 1 ? 13 HELX_P HELX_P4 4 THR A 98 ? HIS A 107 ? THR A 90 HIS A 99 1 ? 10 HELX_P HELX_P5 5 PHE B 11 ? GLU B 16 ? PHE B 3 GLU B 8 1 ? 6 HELX_P HELX_P6 6 SER B 18 ? TYR B 33 ? SER B 10 TYR B 25 1 ? 16 HELX_P HELX_P7 7 THR B 64 ? ILE B 76 ? THR B 56 ILE B 68 1 ? 13 HELX_P HELX_P8 8 THR B 98 ? HIS B 107 ? THR B 90 HIS B 99 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 56 ? PRO A 60 ? LYS A 48 PRO A 52 A 2 ARG A 36 ? LYS A 43 ? ARG A 28 LYS A 35 A 3 LEU A 113 ? SER A 118 ? LEU A 105 SER A 110 A 4 PHE A 85 ? PHE A 87 ? PHE A 77 PHE A 79 B 1 LYS B 56 ? PRO B 60 ? LYS B 48 PRO B 52 B 2 ARG B 36 ? LYS B 43 ? ARG B 28 LYS B 35 B 3 LEU B 113 ? SER B 118 ? LEU B 105 SER B 110 B 4 PHE B 85 ? PHE B 87 ? PHE B 77 PHE B 79 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 59 ? O VAL A 51 N VAL A 37 ? N VAL A 29 A 2 3 N ILE A 40 ? N ILE A 32 O ILE A 115 ? O ILE A 107 A 3 4 O SER A 118 ? O SER A 110 N PHE A 85 ? N PHE A 77 B 1 2 O VAL B 59 ? O VAL B 51 N VAL B 37 ? N VAL B 29 B 2 3 N ILE B 40 ? N ILE B 32 O ILE B 115 ? O ILE B 107 B 3 4 O ALA B 116 ? O ALA B 108 N PHE B 87 ? N PHE B 79 # _database_PDB_matrix.entry_id 3M95 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3M95 _atom_sites.fract_transf_matrix[1][1] 0.010334 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010334 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022569 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -7 ? ? ? A . n A 1 2 HIS 2 -6 ? ? ? A . n A 1 3 HIS 3 -5 ? ? ? A . n A 1 4 HIS 4 -4 ? ? ? A . n A 1 5 HIS 5 -3 ? ? ? A . n A 1 6 HIS 6 -2 ? ? ? A . n A 1 7 HIS 7 -1 ? ? ? A . n A 1 8 GLY 8 0 ? ? ? A . n A 1 9 MET 9 1 1 MET MET A . n A 1 10 LYS 10 2 2 LYS LYS A . n A 1 11 PHE 11 3 3 PHE PHE A . n A 1 12 GLN 12 4 4 GLN GLN A . n A 1 13 TYR 13 5 5 TYR TYR A . n A 1 14 LYS 14 6 6 LYS LYS A . n A 1 15 GLU 15 7 7 GLU GLU A . n A 1 16 GLU 16 8 8 GLU GLU A . n A 1 17 HIS 17 9 9 HIS HIS A . n A 1 18 SER 18 10 10 SER SER A . n A 1 19 PHE 19 11 11 PHE PHE A . n A 1 20 GLU 20 12 12 GLU GLU A . n A 1 21 LYS 21 13 13 LYS LYS A . n A 1 22 ARG 22 14 14 ARG ARG A . n A 1 23 LYS 23 15 15 LYS LYS A . n A 1 24 ALA 24 16 16 ALA ALA A . n A 1 25 GLU 25 17 17 GLU GLU A . n A 1 26 GLY 26 18 18 GLY GLY A . n A 1 27 GLU 27 19 19 GLU GLU A . n A 1 28 LYS 28 20 20 LYS LYS A . n A 1 29 ILE 29 21 21 ILE ILE A . n A 1 30 ARG 30 22 22 ARG ARG A . n A 1 31 ARG 31 23 23 ARG ARG A . n A 1 32 LYS 32 24 24 LYS LYS A . n A 1 33 TYR 33 25 25 TYR TYR A . n A 1 34 PRO 34 26 26 PRO PRO A . n A 1 35 ASP 35 27 27 ASP ASP A . n A 1 36 ARG 36 28 28 ARG ARG A . n A 1 37 VAL 37 29 29 VAL VAL A . n A 1 38 PRO 38 30 30 PRO PRO A . n A 1 39 VAL 39 31 31 VAL VAL A . n A 1 40 ILE 40 32 32 ILE ILE A . n A 1 41 VAL 41 33 33 VAL VAL A . n A 1 42 GLU 42 34 34 GLU GLU A . n A 1 43 LYS 43 35 35 LYS LYS A . n A 1 44 ALA 44 36 36 ALA ALA A . n A 1 45 PRO 45 37 37 PRO PRO A . n A 1 46 LYS 46 38 38 LYS LYS A . n A 1 47 ALA 47 39 39 ALA ALA A . n A 1 48 ARG 48 40 40 ARG ARG A . n A 1 49 LEU 49 41 41 LEU LEU A . n A 1 50 GLY 50 42 42 GLY GLY A . n A 1 51 ASP 51 43 43 ASP ASP A . n A 1 52 LEU 52 44 44 LEU LEU A . n A 1 53 ASP 53 45 45 ASP ASP A . n A 1 54 LYS 54 46 46 LYS LYS A . n A 1 55 LYS 55 47 47 LYS LYS A . n A 1 56 LYS 56 48 48 LYS LYS A . n A 1 57 TYR 57 49 49 TYR TYR A . n A 1 58 LEU 58 50 50 LEU LEU A . n A 1 59 VAL 59 51 51 VAL VAL A . n A 1 60 PRO 60 52 52 PRO PRO A . n A 1 61 SER 61 53 53 SER SER A . n A 1 62 ASP 62 54 54 ASP ASP A . n A 1 63 LEU 63 55 55 LEU LEU A . n A 1 64 THR 64 56 56 THR THR A . n A 1 65 VAL 65 57 57 VAL VAL A . n A 1 66 GLY 66 58 58 GLY GLY A . n A 1 67 GLN 67 59 59 GLN GLN A . n A 1 68 PHE 68 60 60 PHE PHE A . n A 1 69 TYR 69 61 61 TYR TYR A . n A 1 70 PHE 70 62 62 PHE PHE A . n A 1 71 LEU 71 63 63 LEU LEU A . n A 1 72 ILE 72 64 64 ILE ILE A . n A 1 73 ARG 73 65 65 ARG ARG A . n A 1 74 LYS 74 66 66 LYS LYS A . n A 1 75 ARG 75 67 67 ARG ARG A . n A 1 76 ILE 76 68 68 ILE ILE A . n A 1 77 HIS 77 69 69 HIS HIS A . n A 1 78 LEU 78 70 70 LEU LEU A . n A 1 79 ARG 79 71 71 ARG ARG A . n A 1 80 PRO 80 72 72 PRO PRO A . n A 1 81 GLU 81 73 73 GLU GLU A . n A 1 82 ASP 82 74 74 ASP ASP A . n A 1 83 ALA 83 75 75 ALA ALA A . n A 1 84 LEU 84 76 76 LEU LEU A . n A 1 85 PHE 85 77 77 PHE PHE A . n A 1 86 PHE 86 78 78 PHE PHE A . n A 1 87 PHE 87 79 79 PHE PHE A . n A 1 88 VAL 88 80 80 VAL VAL A . n A 1 89 ASN 89 81 81 ASN ASN A . n A 1 90 ASN 90 82 82 ASN ASN A . n A 1 91 VAL 91 83 83 VAL VAL A . n A 1 92 ILE 92 84 84 ILE ILE A . n A 1 93 PRO 93 85 85 PRO PRO A . n A 1 94 PRO 94 86 86 PRO PRO A . n A 1 95 THR 95 87 87 THR THR A . n A 1 96 SER 96 88 88 SER SER A . n A 1 97 ALA 97 89 89 ALA ALA A . n A 1 98 THR 98 90 90 THR THR A . n A 1 99 MET 99 91 91 MET MET A . n A 1 100 GLY 100 92 92 GLY GLY A . n A 1 101 SER 101 93 93 SER SER A . n A 1 102 LEU 102 94 94 LEU LEU A . n A 1 103 TYR 103 95 95 TYR TYR A . n A 1 104 GLN 104 96 96 GLN GLN A . n A 1 105 GLU 105 97 97 GLU GLU A . n A 1 106 HIS 106 98 98 HIS HIS A . n A 1 107 HIS 107 99 99 HIS HIS A . n A 1 108 ASP 108 100 100 ASP ASP A . n A 1 109 GLU 109 101 101 GLU GLU A . n A 1 110 ASP 110 102 102 ASP ASP A . n A 1 111 PHE 111 103 103 PHE PHE A . n A 1 112 PHE 112 104 104 PHE PHE A . n A 1 113 LEU 113 105 105 LEU LEU A . n A 1 114 TYR 114 106 106 TYR TYR A . n A 1 115 ILE 115 107 107 ILE ILE A . n A 1 116 ALA 116 108 108 ALA ALA A . n A 1 117 PHE 117 109 109 PHE PHE A . n A 1 118 SER 118 110 110 SER SER A . n A 1 119 ASP 119 111 111 ASP ASP A . n A 1 120 GLU 120 112 112 GLU GLU A . n A 1 121 ASN 121 113 113 ASN ASN A . n A 1 122 VAL 122 114 114 VAL VAL A . n A 1 123 TYR 123 115 115 TYR TYR A . n A 1 124 GLY 124 116 ? ? ? A . n A 1 125 ASN 125 117 ? ? ? A . n B 1 1 MET 1 -7 ? ? ? B . n B 1 2 HIS 2 -6 ? ? ? B . n B 1 3 HIS 3 -5 ? ? ? B . n B 1 4 HIS 4 -4 ? ? ? B . n B 1 5 HIS 5 -3 ? ? ? B . n B 1 6 HIS 6 -2 ? ? ? B . n B 1 7 HIS 7 -1 ? ? ? B . n B 1 8 GLY 8 0 0 GLY GLY B . n B 1 9 MET 9 1 1 MET MET B . n B 1 10 LYS 10 2 2 LYS LYS B . n B 1 11 PHE 11 3 3 PHE PHE B . n B 1 12 GLN 12 4 4 GLN GLN B . n B 1 13 TYR 13 5 5 TYR TYR B . n B 1 14 LYS 14 6 6 LYS LYS B . n B 1 15 GLU 15 7 7 GLU GLU B . n B 1 16 GLU 16 8 8 GLU GLU B . n B 1 17 HIS 17 9 9 HIS HIS B . n B 1 18 SER 18 10 10 SER SER B . n B 1 19 PHE 19 11 11 PHE PHE B . n B 1 20 GLU 20 12 12 GLU GLU B . n B 1 21 LYS 21 13 13 LYS LYS B . n B 1 22 ARG 22 14 14 ARG ARG B . n B 1 23 LYS 23 15 15 LYS LYS B . n B 1 24 ALA 24 16 16 ALA ALA B . n B 1 25 GLU 25 17 17 GLU GLU B . n B 1 26 GLY 26 18 18 GLY GLY B . n B 1 27 GLU 27 19 19 GLU GLU B . n B 1 28 LYS 28 20 20 LYS LYS B . n B 1 29 ILE 29 21 21 ILE ILE B . n B 1 30 ARG 30 22 22 ARG ARG B . n B 1 31 ARG 31 23 23 ARG ARG B . n B 1 32 LYS 32 24 24 LYS LYS B . n B 1 33 TYR 33 25 25 TYR TYR B . n B 1 34 PRO 34 26 26 PRO PRO B . n B 1 35 ASP 35 27 27 ASP ASP B . n B 1 36 ARG 36 28 28 ARG ARG B . n B 1 37 VAL 37 29 29 VAL VAL B . n B 1 38 PRO 38 30 30 PRO PRO B . n B 1 39 VAL 39 31 31 VAL VAL B . n B 1 40 ILE 40 32 32 ILE ILE B . n B 1 41 VAL 41 33 33 VAL VAL B . n B 1 42 GLU 42 34 34 GLU GLU B . n B 1 43 LYS 43 35 35 LYS LYS B . n B 1 44 ALA 44 36 36 ALA ALA B . n B 1 45 PRO 45 37 37 PRO PRO B . n B 1 46 LYS 46 38 38 LYS LYS B . n B 1 47 ALA 47 39 39 ALA ALA B . n B 1 48 ARG 48 40 40 ARG ARG B . n B 1 49 LEU 49 41 41 LEU LEU B . n B 1 50 GLY 50 42 42 GLY GLY B . n B 1 51 ASP 51 43 43 ASP ASP B . n B 1 52 LEU 52 44 44 LEU LEU B . n B 1 53 ASP 53 45 45 ASP ASP B . n B 1 54 LYS 54 46 46 LYS LYS B . n B 1 55 LYS 55 47 47 LYS LYS B . n B 1 56 LYS 56 48 48 LYS LYS B . n B 1 57 TYR 57 49 49 TYR TYR B . n B 1 58 LEU 58 50 50 LEU LEU B . n B 1 59 VAL 59 51 51 VAL VAL B . n B 1 60 PRO 60 52 52 PRO PRO B . n B 1 61 SER 61 53 53 SER SER B . n B 1 62 ASP 62 54 54 ASP ASP B . n B 1 63 LEU 63 55 55 LEU LEU B . n B 1 64 THR 64 56 56 THR THR B . n B 1 65 VAL 65 57 57 VAL VAL B . n B 1 66 GLY 66 58 58 GLY GLY B . n B 1 67 GLN 67 59 59 GLN GLN B . n B 1 68 PHE 68 60 60 PHE PHE B . n B 1 69 TYR 69 61 61 TYR TYR B . n B 1 70 PHE 70 62 62 PHE PHE B . n B 1 71 LEU 71 63 63 LEU LEU B . n B 1 72 ILE 72 64 64 ILE ILE B . n B 1 73 ARG 73 65 65 ARG ARG B . n B 1 74 LYS 74 66 66 LYS LYS B . n B 1 75 ARG 75 67 67 ARG ARG B . n B 1 76 ILE 76 68 68 ILE ILE B . n B 1 77 HIS 77 69 69 HIS HIS B . n B 1 78 LEU 78 70 70 LEU LEU B . n B 1 79 ARG 79 71 71 ARG ARG B . n B 1 80 PRO 80 72 72 PRO PRO B . n B 1 81 GLU 81 73 73 GLU GLU B . n B 1 82 ASP 82 74 74 ASP ASP B . n B 1 83 ALA 83 75 75 ALA ALA B . n B 1 84 LEU 84 76 76 LEU LEU B . n B 1 85 PHE 85 77 77 PHE PHE B . n B 1 86 PHE 86 78 78 PHE PHE B . n B 1 87 PHE 87 79 79 PHE PHE B . n B 1 88 VAL 88 80 80 VAL VAL B . n B 1 89 ASN 89 81 81 ASN ASN B . n B 1 90 ASN 90 82 82 ASN ASN B . n B 1 91 VAL 91 83 83 VAL VAL B . n B 1 92 ILE 92 84 84 ILE ILE B . n B 1 93 PRO 93 85 85 PRO PRO B . n B 1 94 PRO 94 86 86 PRO PRO B . n B 1 95 THR 95 87 87 THR THR B . n B 1 96 SER 96 88 88 SER SER B . n B 1 97 ALA 97 89 89 ALA ALA B . n B 1 98 THR 98 90 90 THR THR B . n B 1 99 MET 99 91 91 MET MET B . n B 1 100 GLY 100 92 92 GLY GLY B . n B 1 101 SER 101 93 93 SER SER B . n B 1 102 LEU 102 94 94 LEU LEU B . n B 1 103 TYR 103 95 95 TYR TYR B . n B 1 104 GLN 104 96 96 GLN GLN B . n B 1 105 GLU 105 97 97 GLU GLU B . n B 1 106 HIS 106 98 98 HIS HIS B . n B 1 107 HIS 107 99 99 HIS HIS B . n B 1 108 ASP 108 100 100 ASP ASP B . n B 1 109 GLU 109 101 101 GLU GLU B . n B 1 110 ASP 110 102 102 ASP ASP B . n B 1 111 PHE 111 103 103 PHE PHE B . n B 1 112 PHE 112 104 104 PHE PHE B . n B 1 113 LEU 113 105 105 LEU LEU B . n B 1 114 TYR 114 106 106 TYR TYR B . n B 1 115 ILE 115 107 107 ILE ILE B . n B 1 116 ALA 116 108 108 ALA ALA B . n B 1 117 PHE 117 109 109 PHE PHE B . n B 1 118 SER 118 110 110 SER SER B . n B 1 119 ASP 119 111 111 ASP ASP B . n B 1 120 GLU 120 112 112 GLU GLU B . n B 1 121 ASN 121 113 113 ASN ASN B . n B 1 122 VAL 122 114 114 VAL VAL B . n B 1 123 TYR 123 115 115 TYR TYR B . n B 1 124 GLY 124 116 ? ? ? B . n B 1 125 ASN 125 117 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 118 1 HOH HOH A . C 2 HOH 2 119 2 HOH HOH A . C 2 HOH 3 120 3 HOH HOH A . C 2 HOH 4 121 5 HOH HOH A . C 2 HOH 5 122 7 HOH HOH A . C 2 HOH 6 123 8 HOH HOH A . C 2 HOH 7 124 11 HOH HOH A . C 2 HOH 8 125 12 HOH HOH A . C 2 HOH 9 126 13 HOH HOH A . C 2 HOH 10 127 15 HOH HOH A . C 2 HOH 11 128 21 HOH HOH A . C 2 HOH 12 129 25 HOH HOH A . C 2 HOH 13 130 26 HOH HOH A . C 2 HOH 14 131 27 HOH HOH A . C 2 HOH 15 132 30 HOH HOH A . C 2 HOH 16 133 32 HOH HOH A . C 2 HOH 17 134 33 HOH HOH A . C 2 HOH 18 135 35 HOH HOH A . C 2 HOH 19 136 37 HOH HOH A . C 2 HOH 20 137 40 HOH HOH A . C 2 HOH 21 138 46 HOH HOH A . C 2 HOH 22 139 50 HOH HOH A . C 2 HOH 23 140 51 HOH HOH A . C 2 HOH 24 141 52 HOH HOH A . C 2 HOH 25 142 53 HOH HOH A . C 2 HOH 26 143 55 HOH HOH A . C 2 HOH 27 144 56 HOH HOH A . C 2 HOH 28 145 58 HOH HOH A . D 2 HOH 1 118 4 HOH HOH B . D 2 HOH 2 119 6 HOH HOH B . D 2 HOH 3 120 9 HOH HOH B . D 2 HOH 4 121 10 HOH HOH B . D 2 HOH 5 122 14 HOH HOH B . D 2 HOH 6 123 16 HOH HOH B . D 2 HOH 7 124 17 HOH HOH B . D 2 HOH 8 125 18 HOH HOH B . D 2 HOH 9 126 19 HOH HOH B . D 2 HOH 10 127 20 HOH HOH B . D 2 HOH 11 128 22 HOH HOH B . D 2 HOH 12 129 23 HOH HOH B . D 2 HOH 13 130 24 HOH HOH B . D 2 HOH 14 131 28 HOH HOH B . D 2 HOH 15 132 29 HOH HOH B . D 2 HOH 16 133 31 HOH HOH B . D 2 HOH 17 134 34 HOH HOH B . D 2 HOH 18 135 36 HOH HOH B . D 2 HOH 19 136 38 HOH HOH B . D 2 HOH 20 137 39 HOH HOH B . D 2 HOH 21 138 41 HOH HOH B . D 2 HOH 22 139 42 HOH HOH B . D 2 HOH 23 140 43 HOH HOH B . D 2 HOH 24 141 44 HOH HOH B . D 2 HOH 25 142 45 HOH HOH B . D 2 HOH 26 143 47 HOH HOH B . D 2 HOH 27 144 48 HOH HOH B . D 2 HOH 28 145 49 HOH HOH B . D 2 HOH 29 146 54 HOH HOH B . D 2 HOH 30 147 57 HOH HOH B . D 2 HOH 31 148 59 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C 2 1 B,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-07-21 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -37.7160 16.6490 -0.3480 0.1996 0.1830 0.0922 -0.0842 0.0273 0.0086 2.0659 2.7403 1.0896 1.1620 -0.2909 0.0712 0.0681 0.1502 0.2631 -0.0882 0.1312 0.0425 -0.0349 0.2796 -0.1993 'X-RAY DIFFRACTION' 2 ? refined -56.3350 16.3010 16.7860 0.2535 0.1813 0.0585 0.1009 0.0650 0.0620 5.2018 3.9422 1.4713 -2.7539 -0.9256 0.6646 0.5268 0.5078 0.4893 -0.2507 -0.3175 -0.2676 -0.1773 -0.3335 -0.2093 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 5 ? ? A 85 ? ? ? ? 'X-RAY DIFFRACTION' 2 1 A 89 ? ? A 110 ? ? ? ? 'X-RAY DIFFRACTION' 3 2 B 5 ? ? B 85 ? ? ? ? 'X-RAY DIFFRACTION' 4 2 B 89 ? ? B 110 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 MOLREP phasing . ? 2 REFMAC refinement 5.5.0102 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OD2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASP _pdbx_validate_close_contact.auth_seq_id_1 54 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 121 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 65 ? ? CZ A ARG 65 ? ? NH1 A ARG 65 ? ? 116.98 120.30 -3.32 0.50 N 2 1 CB A ASP 74 ? ? CG A ASP 74 ? ? OD2 A ASP 74 ? ? 112.79 118.30 -5.51 0.90 N 3 1 NE B ARG 65 ? ? CZ B ARG 65 ? ? NH1 B ARG 65 ? ? 115.79 120.30 -4.51 0.50 N 4 1 NE B ARG 65 ? ? CZ B ARG 65 ? ? NH2 B ARG 65 ? ? 123.43 120.30 3.13 0.50 N 5 1 CG1 B ILE 68 ? ? CB B ILE 68 ? ? CG2 B ILE 68 ? ? 98.17 111.40 -13.23 2.20 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 40 ? ? -103.88 57.97 2 1 HIS A 69 ? ? 70.16 38.41 3 1 VAL A 114 ? ? -133.57 -40.54 4 1 TYR B 25 ? ? -154.65 66.14 5 1 LYS B 38 ? ? 37.29 49.28 6 1 ARG B 40 ? ? -101.95 69.24 7 1 HIS B 69 ? ? 70.98 43.17 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 LYS _pdbx_validate_peptide_omega.auth_asym_id_1 B _pdbx_validate_peptide_omega.auth_seq_id_1 38 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 ALA _pdbx_validate_peptide_omega.auth_asym_id_2 B _pdbx_validate_peptide_omega.auth_seq_id_2 39 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 145.45 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -7 ? A MET 1 2 1 Y 1 A HIS -6 ? A HIS 2 3 1 Y 1 A HIS -5 ? A HIS 3 4 1 Y 1 A HIS -4 ? A HIS 4 5 1 Y 1 A HIS -3 ? A HIS 5 6 1 Y 1 A HIS -2 ? A HIS 6 7 1 Y 1 A HIS -1 ? A HIS 7 8 1 Y 1 A GLY 0 ? A GLY 8 9 1 Y 1 A GLY 116 ? A GLY 124 10 1 Y 1 A ASN 117 ? A ASN 125 11 1 Y 1 B MET -7 ? B MET 1 12 1 Y 1 B HIS -6 ? B HIS 2 13 1 Y 1 B HIS -5 ? B HIS 3 14 1 Y 1 B HIS -4 ? B HIS 4 15 1 Y 1 B HIS -3 ? B HIS 5 16 1 Y 1 B HIS -2 ? B HIS 6 17 1 Y 1 B HIS -1 ? B HIS 7 18 1 Y 1 B GLY 116 ? B GLY 124 19 1 Y 1 B ASN 117 ? B ASN 125 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 PHE N N N N 236 PHE CA C N S 237 PHE C C N N 238 PHE O O N N 239 PHE CB C N N 240 PHE CG C Y N 241 PHE CD1 C Y N 242 PHE CD2 C Y N 243 PHE CE1 C Y N 244 PHE CE2 C Y N 245 PHE CZ C Y N 246 PHE OXT O N N 247 PHE H H N N 248 PHE H2 H N N 249 PHE HA H N N 250 PHE HB2 H N N 251 PHE HB3 H N N 252 PHE HD1 H N N 253 PHE HD2 H N N 254 PHE HE1 H N N 255 PHE HE2 H N N 256 PHE HZ H N N 257 PHE HXT H N N 258 PRO N N N N 259 PRO CA C N S 260 PRO C C N N 261 PRO O O N N 262 PRO CB C N N 263 PRO CG C N N 264 PRO CD C N N 265 PRO OXT O N N 266 PRO H H N N 267 PRO HA H N N 268 PRO HB2 H N N 269 PRO HB3 H N N 270 PRO HG2 H N N 271 PRO HG3 H N N 272 PRO HD2 H N N 273 PRO HD3 H N N 274 PRO HXT H N N 275 SER N N N N 276 SER CA C N S 277 SER C C N N 278 SER O O N N 279 SER CB C N N 280 SER OG O N N 281 SER OXT O N N 282 SER H H N N 283 SER H2 H N N 284 SER HA H N N 285 SER HB2 H N N 286 SER HB3 H N N 287 SER HG H N N 288 SER HXT H N N 289 THR N N N N 290 THR CA C N S 291 THR C C N N 292 THR O O N N 293 THR CB C N R 294 THR OG1 O N N 295 THR CG2 C N N 296 THR OXT O N N 297 THR H H N N 298 THR H2 H N N 299 THR HA H N N 300 THR HB H N N 301 THR HG1 H N N 302 THR HG21 H N N 303 THR HG22 H N N 304 THR HG23 H N N 305 THR HXT H N N 306 TYR N N N N 307 TYR CA C N S 308 TYR C C N N 309 TYR O O N N 310 TYR CB C N N 311 TYR CG C Y N 312 TYR CD1 C Y N 313 TYR CD2 C Y N 314 TYR CE1 C Y N 315 TYR CE2 C Y N 316 TYR CZ C Y N 317 TYR OH O N N 318 TYR OXT O N N 319 TYR H H N N 320 TYR H2 H N N 321 TYR HA H N N 322 TYR HB2 H N N 323 TYR HB3 H N N 324 TYR HD1 H N N 325 TYR HD2 H N N 326 TYR HE1 H N N 327 TYR HE2 H N N 328 TYR HH H N N 329 TYR HXT H N N 330 VAL N N N N 331 VAL CA C N S 332 VAL C C N N 333 VAL O O N N 334 VAL CB C N N 335 VAL CG1 C N N 336 VAL CG2 C N N 337 VAL OXT O N N 338 VAL H H N N 339 VAL H2 H N N 340 VAL HA H N N 341 VAL HB H N N 342 VAL HG11 H N N 343 VAL HG12 H N N 344 VAL HG13 H N N 345 VAL HG21 H N N 346 VAL HG22 H N N 347 VAL HG23 H N N 348 VAL HXT H N N 349 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 THR N CA sing N N 277 THR N H sing N N 278 THR N H2 sing N N 279 THR CA C sing N N 280 THR CA CB sing N N 281 THR CA HA sing N N 282 THR C O doub N N 283 THR C OXT sing N N 284 THR CB OG1 sing N N 285 THR CB CG2 sing N N 286 THR CB HB sing N N 287 THR OG1 HG1 sing N N 288 THR CG2 HG21 sing N N 289 THR CG2 HG22 sing N N 290 THR CG2 HG23 sing N N 291 THR OXT HXT sing N N 292 TYR N CA sing N N 293 TYR N H sing N N 294 TYR N H2 sing N N 295 TYR CA C sing N N 296 TYR CA CB sing N N 297 TYR CA HA sing N N 298 TYR C O doub N N 299 TYR C OXT sing N N 300 TYR CB CG sing N N 301 TYR CB HB2 sing N N 302 TYR CB HB3 sing N N 303 TYR CG CD1 doub Y N 304 TYR CG CD2 sing Y N 305 TYR CD1 CE1 sing Y N 306 TYR CD1 HD1 sing N N 307 TYR CD2 CE2 doub Y N 308 TYR CD2 HD2 sing N N 309 TYR CE1 CZ doub Y N 310 TYR CE1 HE1 sing N N 311 TYR CE2 CZ sing Y N 312 TYR CE2 HE2 sing N N 313 TYR CZ OH sing N N 314 TYR OH HH sing N N 315 TYR OXT HXT sing N N 316 VAL N CA sing N N 317 VAL N H sing N N 318 VAL N H2 sing N N 319 VAL CA C sing N N 320 VAL CA CB sing N N 321 VAL CA HA sing N N 322 VAL C O doub N N 323 VAL C OXT sing N N 324 VAL CB CG1 sing N N 325 VAL CB CG2 sing N N 326 VAL CB HB sing N N 327 VAL CG1 HG11 sing N N 328 VAL CG1 HG12 sing N N 329 VAL CG1 HG13 sing N N 330 VAL CG2 HG21 sing N N 331 VAL CG2 HG22 sing N N 332 VAL CG2 HG23 sing N N 333 VAL OXT HXT sing N N 334 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1KJT _pdbx_initial_refinement_model.details 'PDB ENTRY 1KJT' #