data_3M9O # _entry.id 3M9O # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3M9O pdb_00003m9o 10.2210/pdb3m9o/pdb NDB NA0500 ? ? RCSB RCSB058283 ? ? WWPDB D_1000058283 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-06-16 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-08 4 'Structure model' 1 3 2023-09-06 5 'Structure model' 1 4 2024-03-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Source and taxonomy' 8 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_initial_refinement_model 6 4 'Structure model' pdbx_struct_conn_angle 7 4 'Structure model' struct_conn 8 4 'Structure model' struct_site 9 5 'Structure model' entity 10 5 'Structure model' pdbx_entity_src_syn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 23 4 'Structure model' '_pdbx_struct_conn_angle.value' 24 4 'Structure model' '_struct_conn.pdbx_dist_value' 25 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 26 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 27 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 28 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 29 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 30 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 31 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 32 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 33 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 34 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 35 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 36 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 37 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 38 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 39 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 40 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 41 4 'Structure model' '_struct_site.pdbx_auth_seq_id' 42 5 'Structure model' '_entity.details' # _pdbx_database_status.entry_id 3M9O _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-03-22 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3M9M . unspecified PDB 3M9N . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wong, J.H.Y.' 1 'Ling, H.' 2 # _citation.id primary _citation.title 'Structural insight into dynamic bypass of the major cisplatin-DNA adduct by Y-family polymerase Dpo4.' _citation.journal_abbrev 'Embo J.' _citation.journal_volume 29 _citation.page_first 2059 _citation.page_last 2069 _citation.year 2010 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20512114 _citation.pdbx_database_id_DOI 10.1038/emboj.2010.101 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wong, J.H.' 1 ? primary 'Brown, J.A.' 2 ? primary 'Suo, Z.' 3 ? primary 'Blum, P.' 4 ? primary 'Nohmi, T.' 5 ? primary 'Ling, H.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA polymerase IV' 40257.879 1 2.7.7.7 ? ? ? 2 polymer syn ;DNA (5'-D(*GP*GP*GP*AP*AP*GP*GP*AP*AP*AP*GP*CP*C)-3') ; 4074.674 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*TP*CP*TP*GP*GP*CP*TP*TP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3') ; 5345.439 1 ? ? ? ? 4 non-polymer syn 'CALCIUM ION' 40.078 4 ? ? ? 'cisplatin modified guanine di-nucleotide' 5 non-polymer syn "ADENOSINE-5'-TRIPHOSPHATE" 507.181 1 ? ? ? ? 6 non-polymer syn Cisplatin 300.045 1 ? ? ? ? 7 water nat water 18.015 258 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Pol IV' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEV YQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKP NGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTR VRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQ KILEEDERKIRRIGVRFSKFIEAIGLDKFFDT ; ;MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEV YQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKP NGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTR VRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQ KILEEDERKIRRIGVRFSKFIEAIGLDKFFDT ; B ? 2 polydeoxyribonucleotide no no '(DG)(DG)(DG)(DA)(DA)(DG)(DG)(DA)(DA)(DA)(DG)(DC)(DC)' GGGAAGGAAAGCC P ? 3 polydeoxyribonucleotide no no '(DT)(DC)(DT)(DG)(DG)(DC)(DT)(DT)(DT)(DC)(DC)(DT)(DT)(DC)(DC)(DC)(DC)(DC)' TCTGGCTTTCCTTCCCCC T ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'CALCIUM ION' CA 5 "ADENOSINE-5'-TRIPHOSPHATE" ATP 6 Cisplatin CPT 7 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ILE n 1 3 VAL n 1 4 LEU n 1 5 PHE n 1 6 VAL n 1 7 ASP n 1 8 PHE n 1 9 ASP n 1 10 TYR n 1 11 PHE n 1 12 TYR n 1 13 ALA n 1 14 GLN n 1 15 VAL n 1 16 GLU n 1 17 GLU n 1 18 VAL n 1 19 LEU n 1 20 ASN n 1 21 PRO n 1 22 SER n 1 23 LEU n 1 24 LYS n 1 25 GLY n 1 26 LYS n 1 27 PRO n 1 28 VAL n 1 29 VAL n 1 30 VAL n 1 31 CYS n 1 32 VAL n 1 33 PHE n 1 34 SER n 1 35 GLY n 1 36 ARG n 1 37 PHE n 1 38 GLU n 1 39 ASP n 1 40 SER n 1 41 GLY n 1 42 ALA n 1 43 VAL n 1 44 ALA n 1 45 THR n 1 46 ALA n 1 47 ASN n 1 48 TYR n 1 49 GLU n 1 50 ALA n 1 51 ARG n 1 52 LYS n 1 53 PHE n 1 54 GLY n 1 55 VAL n 1 56 LYS n 1 57 ALA n 1 58 GLY n 1 59 ILE n 1 60 PRO n 1 61 ILE n 1 62 VAL n 1 63 GLU n 1 64 ALA n 1 65 LYS n 1 66 LYS n 1 67 ILE n 1 68 LEU n 1 69 PRO n 1 70 ASN n 1 71 ALA n 1 72 VAL n 1 73 TYR n 1 74 LEU n 1 75 PRO n 1 76 MET n 1 77 ARG n 1 78 LYS n 1 79 GLU n 1 80 VAL n 1 81 TYR n 1 82 GLN n 1 83 GLN n 1 84 VAL n 1 85 SER n 1 86 SER n 1 87 ARG n 1 88 ILE n 1 89 MET n 1 90 ASN n 1 91 LEU n 1 92 LEU n 1 93 ARG n 1 94 GLU n 1 95 TYR n 1 96 SER n 1 97 GLU n 1 98 LYS n 1 99 ILE n 1 100 GLU n 1 101 ILE n 1 102 ALA n 1 103 SER n 1 104 ILE n 1 105 ASP n 1 106 GLU n 1 107 ALA n 1 108 TYR n 1 109 LEU n 1 110 ASP n 1 111 ILE n 1 112 SER n 1 113 ASP n 1 114 LYS n 1 115 VAL n 1 116 ARG n 1 117 ASP n 1 118 TYR n 1 119 ARG n 1 120 GLU n 1 121 ALA n 1 122 TYR n 1 123 ASN n 1 124 LEU n 1 125 GLY n 1 126 LEU n 1 127 GLU n 1 128 ILE n 1 129 LYS n 1 130 ASN n 1 131 LYS n 1 132 ILE n 1 133 LEU n 1 134 GLU n 1 135 LYS n 1 136 GLU n 1 137 LYS n 1 138 ILE n 1 139 THR n 1 140 VAL n 1 141 THR n 1 142 VAL n 1 143 GLY n 1 144 ILE n 1 145 SER n 1 146 LYS n 1 147 ASN n 1 148 LYS n 1 149 VAL n 1 150 PHE n 1 151 ALA n 1 152 LYS n 1 153 ILE n 1 154 ALA n 1 155 ALA n 1 156 ASP n 1 157 MET n 1 158 ALA n 1 159 LYS n 1 160 PRO n 1 161 ASN n 1 162 GLY n 1 163 ILE n 1 164 LYS n 1 165 VAL n 1 166 ILE n 1 167 ASP n 1 168 ASP n 1 169 GLU n 1 170 GLU n 1 171 VAL n 1 172 LYS n 1 173 ARG n 1 174 LEU n 1 175 ILE n 1 176 ARG n 1 177 GLU n 1 178 LEU n 1 179 ASP n 1 180 ILE n 1 181 ALA n 1 182 ASP n 1 183 VAL n 1 184 PRO n 1 185 GLY n 1 186 ILE n 1 187 GLY n 1 188 ASN n 1 189 ILE n 1 190 THR n 1 191 ALA n 1 192 GLU n 1 193 LYS n 1 194 LEU n 1 195 LYS n 1 196 LYS n 1 197 LEU n 1 198 GLY n 1 199 ILE n 1 200 ASN n 1 201 LYS n 1 202 LEU n 1 203 VAL n 1 204 ASP n 1 205 THR n 1 206 LEU n 1 207 SER n 1 208 ILE n 1 209 GLU n 1 210 PHE n 1 211 ASP n 1 212 LYS n 1 213 LEU n 1 214 LYS n 1 215 GLY n 1 216 MET n 1 217 ILE n 1 218 GLY n 1 219 GLU n 1 220 ALA n 1 221 LYS n 1 222 ALA n 1 223 LYS n 1 224 TYR n 1 225 LEU n 1 226 ILE n 1 227 SER n 1 228 LEU n 1 229 ALA n 1 230 ARG n 1 231 ASP n 1 232 GLU n 1 233 TYR n 1 234 ASN n 1 235 GLU n 1 236 PRO n 1 237 ILE n 1 238 ARG n 1 239 THR n 1 240 ARG n 1 241 VAL n 1 242 ARG n 1 243 LYS n 1 244 SER n 1 245 ILE n 1 246 GLY n 1 247 ARG n 1 248 ILE n 1 249 VAL n 1 250 THR n 1 251 MET n 1 252 LYS n 1 253 ARG n 1 254 ASN n 1 255 SER n 1 256 ARG n 1 257 ASN n 1 258 LEU n 1 259 GLU n 1 260 GLU n 1 261 ILE n 1 262 LYS n 1 263 PRO n 1 264 TYR n 1 265 LEU n 1 266 PHE n 1 267 ARG n 1 268 ALA n 1 269 ILE n 1 270 GLU n 1 271 GLU n 1 272 SER n 1 273 TYR n 1 274 TYR n 1 275 LYS n 1 276 LEU n 1 277 ASP n 1 278 LYS n 1 279 ARG n 1 280 ILE n 1 281 PRO n 1 282 LYS n 1 283 ALA n 1 284 ILE n 1 285 HIS n 1 286 VAL n 1 287 VAL n 1 288 ALA n 1 289 VAL n 1 290 THR n 1 291 GLU n 1 292 ASP n 1 293 LEU n 1 294 ASP n 1 295 ILE n 1 296 VAL n 1 297 SER n 1 298 ARG n 1 299 GLY n 1 300 ARG n 1 301 THR n 1 302 PHE n 1 303 PRO n 1 304 HIS n 1 305 GLY n 1 306 ILE n 1 307 SER n 1 308 LYS n 1 309 GLU n 1 310 THR n 1 311 ALA n 1 312 TYR n 1 313 SER n 1 314 GLU n 1 315 SER n 1 316 VAL n 1 317 LYS n 1 318 LEU n 1 319 LEU n 1 320 GLN n 1 321 LYS n 1 322 ILE n 1 323 LEU n 1 324 GLU n 1 325 GLU n 1 326 ASP n 1 327 GLU n 1 328 ARG n 1 329 LYS n 1 330 ILE n 1 331 ARG n 1 332 ARG n 1 333 ILE n 1 334 GLY n 1 335 VAL n 1 336 ARG n 1 337 PHE n 1 338 SER n 1 339 LYS n 1 340 PHE n 1 341 ILE n 1 342 GLU n 1 343 ALA n 1 344 ILE n 1 345 GLY n 1 346 LEU n 1 347 ASP n 1 348 LYS n 1 349 PHE n 1 350 PHE n 1 351 ASP n 1 352 THR n 2 1 DG n 2 2 DG n 2 3 DG n 2 4 DA n 2 5 DA n 2 6 DG n 2 7 DG n 2 8 DA n 2 9 DA n 2 10 DA n 2 11 DG n 2 12 DC n 2 13 DC n 3 1 DT n 3 2 DC n 3 3 DT n 3 4 DG n 3 5 DG n 3 6 DC n 3 7 DT n 3 8 DT n 3 9 DT n 3 10 DC n 3 11 DC n 3 12 DT n 3 13 DT n 3 14 DC n 3 15 DC n 3 16 DC n 3 17 DC n 3 18 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'dbh, dpo4, SSO2448' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain P2 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Sulfolobus solfataricus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2287 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET22b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? ? ? ? 'synthetic DNA oligo' 3 1 sample ? ? ? ? ? deoxynucleotides # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 ATP non-polymer . "ADENOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O13 P3' 507.181 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CPT non-polymer . Cisplatin 'diammine(dichloro)platinum' 'Cl2 H6 N2 Pt' 300.045 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET B . n A 1 2 ILE 2 2 2 ILE ILE B . n A 1 3 VAL 3 3 3 VAL VAL B . n A 1 4 LEU 4 4 4 LEU LEU B . n A 1 5 PHE 5 5 5 PHE PHE B . n A 1 6 VAL 6 6 6 VAL VAL B . n A 1 7 ASP 7 7 7 ASP ASP B . n A 1 8 PHE 8 8 8 PHE PHE B . n A 1 9 ASP 9 9 9 ASP ASP B . n A 1 10 TYR 10 10 10 TYR TYR B . n A 1 11 PHE 11 11 11 PHE PHE B . n A 1 12 TYR 12 12 12 TYR TYR B . n A 1 13 ALA 13 13 13 ALA ALA B . n A 1 14 GLN 14 14 14 GLN GLN B . n A 1 15 VAL 15 15 15 VAL VAL B . n A 1 16 GLU 16 16 16 GLU GLU B . n A 1 17 GLU 17 17 17 GLU GLU B . n A 1 18 VAL 18 18 18 VAL VAL B . n A 1 19 LEU 19 19 19 LEU LEU B . n A 1 20 ASN 20 20 20 ASN ASN B . n A 1 21 PRO 21 21 21 PRO PRO B . n A 1 22 SER 22 22 22 SER SER B . n A 1 23 LEU 23 23 23 LEU LEU B . n A 1 24 LYS 24 24 24 LYS LYS B . n A 1 25 GLY 25 25 25 GLY GLY B . n A 1 26 LYS 26 26 26 LYS LYS B . n A 1 27 PRO 27 27 27 PRO PRO B . n A 1 28 VAL 28 28 28 VAL VAL B . n A 1 29 VAL 29 29 29 VAL VAL B . n A 1 30 VAL 30 30 30 VAL VAL B . n A 1 31 CYS 31 31 31 CYS CYS B . n A 1 32 VAL 32 32 32 VAL VAL B . n A 1 33 PHE 33 33 33 PHE PHE B . n A 1 34 SER 34 34 34 SER SER B . n A 1 35 GLY 35 35 35 GLY GLY B . n A 1 36 ARG 36 36 36 ARG ARG B . n A 1 37 PHE 37 37 37 PHE PHE B . n A 1 38 GLU 38 38 38 GLU GLU B . n A 1 39 ASP 39 39 39 ASP ASP B . n A 1 40 SER 40 40 40 SER SER B . n A 1 41 GLY 41 41 41 GLY GLY B . n A 1 42 ALA 42 42 42 ALA ALA B . n A 1 43 VAL 43 43 43 VAL VAL B . n A 1 44 ALA 44 44 44 ALA ALA B . n A 1 45 THR 45 45 45 THR THR B . n A 1 46 ALA 46 46 46 ALA ALA B . n A 1 47 ASN 47 47 47 ASN ASN B . n A 1 48 TYR 48 48 48 TYR TYR B . n A 1 49 GLU 49 49 49 GLU GLU B . n A 1 50 ALA 50 50 50 ALA ALA B . n A 1 51 ARG 51 51 51 ARG ARG B . n A 1 52 LYS 52 52 52 LYS LYS B . n A 1 53 PHE 53 53 53 PHE PHE B . n A 1 54 GLY 54 54 54 GLY GLY B . n A 1 55 VAL 55 55 55 VAL VAL B . n A 1 56 LYS 56 56 56 LYS LYS B . n A 1 57 ALA 57 57 57 ALA ALA B . n A 1 58 GLY 58 58 58 GLY GLY B . n A 1 59 ILE 59 59 59 ILE ILE B . n A 1 60 PRO 60 60 60 PRO PRO B . n A 1 61 ILE 61 61 61 ILE ILE B . n A 1 62 VAL 62 62 62 VAL VAL B . n A 1 63 GLU 63 63 63 GLU GLU B . n A 1 64 ALA 64 64 64 ALA ALA B . n A 1 65 LYS 65 65 65 LYS LYS B . n A 1 66 LYS 66 66 66 LYS LYS B . n A 1 67 ILE 67 67 67 ILE ILE B . n A 1 68 LEU 68 68 68 LEU LEU B . n A 1 69 PRO 69 69 69 PRO PRO B . n A 1 70 ASN 70 70 70 ASN ASN B . n A 1 71 ALA 71 71 71 ALA ALA B . n A 1 72 VAL 72 72 72 VAL VAL B . n A 1 73 TYR 73 73 73 TYR TYR B . n A 1 74 LEU 74 74 74 LEU LEU B . n A 1 75 PRO 75 75 75 PRO PRO B . n A 1 76 MET 76 76 76 MET MET B . n A 1 77 ARG 77 77 77 ARG ARG B . n A 1 78 LYS 78 78 78 LYS LYS B . n A 1 79 GLU 79 79 79 GLU GLU B . n A 1 80 VAL 80 80 80 VAL VAL B . n A 1 81 TYR 81 81 81 TYR TYR B . n A 1 82 GLN 82 82 82 GLN GLN B . n A 1 83 GLN 83 83 83 GLN GLN B . n A 1 84 VAL 84 84 84 VAL VAL B . n A 1 85 SER 85 85 85 SER SER B . n A 1 86 SER 86 86 86 SER SER B . n A 1 87 ARG 87 87 87 ARG ARG B . n A 1 88 ILE 88 88 88 ILE ILE B . n A 1 89 MET 89 89 89 MET MET B . n A 1 90 ASN 90 90 90 ASN ASN B . n A 1 91 LEU 91 91 91 LEU LEU B . n A 1 92 LEU 92 92 92 LEU LEU B . n A 1 93 ARG 93 93 93 ARG ARG B . n A 1 94 GLU 94 94 94 GLU GLU B . n A 1 95 TYR 95 95 95 TYR TYR B . n A 1 96 SER 96 96 96 SER SER B . n A 1 97 GLU 97 97 97 GLU GLU B . n A 1 98 LYS 98 98 98 LYS LYS B . n A 1 99 ILE 99 99 99 ILE ILE B . n A 1 100 GLU 100 100 100 GLU GLU B . n A 1 101 ILE 101 101 101 ILE ILE B . n A 1 102 ALA 102 102 102 ALA ALA B . n A 1 103 SER 103 103 103 SER SER B . n A 1 104 ILE 104 104 104 ILE ILE B . n A 1 105 ASP 105 105 105 ASP ASP B . n A 1 106 GLU 106 106 106 GLU GLU B . n A 1 107 ALA 107 107 107 ALA ALA B . n A 1 108 TYR 108 108 108 TYR TYR B . n A 1 109 LEU 109 109 109 LEU LEU B . n A 1 110 ASP 110 110 110 ASP ASP B . n A 1 111 ILE 111 111 111 ILE ILE B . n A 1 112 SER 112 112 112 SER SER B . n A 1 113 ASP 113 113 113 ASP ASP B . n A 1 114 LYS 114 114 114 LYS LYS B . n A 1 115 VAL 115 115 115 VAL VAL B . n A 1 116 ARG 116 116 116 ARG ARG B . n A 1 117 ASP 117 117 117 ASP ASP B . n A 1 118 TYR 118 118 118 TYR TYR B . n A 1 119 ARG 119 119 119 ARG ARG B . n A 1 120 GLU 120 120 120 GLU GLU B . n A 1 121 ALA 121 121 121 ALA ALA B . n A 1 122 TYR 122 122 122 TYR TYR B . n A 1 123 ASN 123 123 123 ASN ASN B . n A 1 124 LEU 124 124 124 LEU LEU B . n A 1 125 GLY 125 125 125 GLY GLY B . n A 1 126 LEU 126 126 126 LEU LEU B . n A 1 127 GLU 127 127 127 GLU GLU B . n A 1 128 ILE 128 128 128 ILE ILE B . n A 1 129 LYS 129 129 129 LYS LYS B . n A 1 130 ASN 130 130 130 ASN ASN B . n A 1 131 LYS 131 131 131 LYS LYS B . n A 1 132 ILE 132 132 132 ILE ILE B . n A 1 133 LEU 133 133 133 LEU LEU B . n A 1 134 GLU 134 134 134 GLU GLU B . n A 1 135 LYS 135 135 135 LYS LYS B . n A 1 136 GLU 136 136 136 GLU GLU B . n A 1 137 LYS 137 137 137 LYS LYS B . n A 1 138 ILE 138 138 138 ILE ILE B . n A 1 139 THR 139 139 139 THR THR B . n A 1 140 VAL 140 140 140 VAL VAL B . n A 1 141 THR 141 141 141 THR THR B . n A 1 142 VAL 142 142 142 VAL VAL B . n A 1 143 GLY 143 143 143 GLY GLY B . n A 1 144 ILE 144 144 144 ILE ILE B . n A 1 145 SER 145 145 145 SER SER B . n A 1 146 LYS 146 146 146 LYS LYS B . n A 1 147 ASN 147 147 147 ASN ASN B . n A 1 148 LYS 148 148 148 LYS LYS B . n A 1 149 VAL 149 149 149 VAL VAL B . n A 1 150 PHE 150 150 150 PHE PHE B . n A 1 151 ALA 151 151 151 ALA ALA B . n A 1 152 LYS 152 152 152 LYS LYS B . n A 1 153 ILE 153 153 153 ILE ILE B . n A 1 154 ALA 154 154 154 ALA ALA B . n A 1 155 ALA 155 155 155 ALA ALA B . n A 1 156 ASP 156 156 156 ASP ASP B . n A 1 157 MET 157 157 157 MET MET B . n A 1 158 ALA 158 158 158 ALA ALA B . n A 1 159 LYS 159 159 159 LYS LYS B . n A 1 160 PRO 160 160 160 PRO PRO B . n A 1 161 ASN 161 161 161 ASN ASN B . n A 1 162 GLY 162 162 162 GLY GLY B . n A 1 163 ILE 163 163 163 ILE ILE B . n A 1 164 LYS 164 164 164 LYS LYS B . n A 1 165 VAL 165 165 165 VAL VAL B . n A 1 166 ILE 166 166 166 ILE ILE B . n A 1 167 ASP 167 167 167 ASP ASP B . n A 1 168 ASP 168 168 168 ASP ASP B . n A 1 169 GLU 169 169 169 GLU GLU B . n A 1 170 GLU 170 170 170 GLU GLU B . n A 1 171 VAL 171 171 171 VAL VAL B . n A 1 172 LYS 172 172 172 LYS LYS B . n A 1 173 ARG 173 173 173 ARG ARG B . n A 1 174 LEU 174 174 174 LEU LEU B . n A 1 175 ILE 175 175 175 ILE ILE B . n A 1 176 ARG 176 176 176 ARG ARG B . n A 1 177 GLU 177 177 177 GLU GLU B . n A 1 178 LEU 178 178 178 LEU LEU B . n A 1 179 ASP 179 179 179 ASP ASP B . n A 1 180 ILE 180 180 180 ILE ILE B . n A 1 181 ALA 181 181 181 ALA ALA B . n A 1 182 ASP 182 182 182 ASP ASP B . n A 1 183 VAL 183 183 183 VAL VAL B . n A 1 184 PRO 184 184 184 PRO PRO B . n A 1 185 GLY 185 185 185 GLY GLY B . n A 1 186 ILE 186 186 186 ILE ILE B . n A 1 187 GLY 187 187 187 GLY GLY B . n A 1 188 ASN 188 188 188 ASN ASN B . n A 1 189 ILE 189 189 189 ILE ILE B . n A 1 190 THR 190 190 190 THR THR B . n A 1 191 ALA 191 191 191 ALA ALA B . n A 1 192 GLU 192 192 192 GLU GLU B . n A 1 193 LYS 193 193 193 LYS LYS B . n A 1 194 LEU 194 194 194 LEU LEU B . n A 1 195 LYS 195 195 195 LYS LYS B . n A 1 196 LYS 196 196 196 LYS LYS B . n A 1 197 LEU 197 197 197 LEU LEU B . n A 1 198 GLY 198 198 198 GLY GLY B . n A 1 199 ILE 199 199 199 ILE ILE B . n A 1 200 ASN 200 200 200 ASN ASN B . n A 1 201 LYS 201 201 201 LYS LYS B . n A 1 202 LEU 202 202 202 LEU LEU B . n A 1 203 VAL 203 203 203 VAL VAL B . n A 1 204 ASP 204 204 204 ASP ASP B . n A 1 205 THR 205 205 205 THR THR B . n A 1 206 LEU 206 206 206 LEU LEU B . n A 1 207 SER 207 207 207 SER SER B . n A 1 208 ILE 208 208 208 ILE ILE B . n A 1 209 GLU 209 209 209 GLU GLU B . n A 1 210 PHE 210 210 210 PHE PHE B . n A 1 211 ASP 211 211 211 ASP ASP B . n A 1 212 LYS 212 212 212 LYS LYS B . n A 1 213 LEU 213 213 213 LEU LEU B . n A 1 214 LYS 214 214 214 LYS LYS B . n A 1 215 GLY 215 215 215 GLY GLY B . n A 1 216 MET 216 216 216 MET MET B . n A 1 217 ILE 217 217 217 ILE ILE B . n A 1 218 GLY 218 218 218 GLY GLY B . n A 1 219 GLU 219 219 219 GLU GLU B . n A 1 220 ALA 220 220 220 ALA ALA B . n A 1 221 LYS 221 221 221 LYS LYS B . n A 1 222 ALA 222 222 222 ALA ALA B . n A 1 223 LYS 223 223 223 LYS LYS B . n A 1 224 TYR 224 224 224 TYR TYR B . n A 1 225 LEU 225 225 225 LEU LEU B . n A 1 226 ILE 226 226 226 ILE ILE B . n A 1 227 SER 227 227 227 SER SER B . n A 1 228 LEU 228 228 228 LEU LEU B . n A 1 229 ALA 229 229 229 ALA ALA B . n A 1 230 ARG 230 230 230 ARG ARG B . n A 1 231 ASP 231 231 231 ASP ASP B . n A 1 232 GLU 232 232 232 GLU GLU B . n A 1 233 TYR 233 233 233 TYR TYR B . n A 1 234 ASN 234 234 234 ASN ASN B . n A 1 235 GLU 235 235 235 GLU GLU B . n A 1 236 PRO 236 236 236 PRO PRO B . n A 1 237 ILE 237 237 237 ILE ILE B . n A 1 238 ARG 238 238 238 ARG ARG B . n A 1 239 THR 239 239 239 THR THR B . n A 1 240 ARG 240 240 240 ARG ARG B . n A 1 241 VAL 241 241 241 VAL VAL B . n A 1 242 ARG 242 242 242 ARG ARG B . n A 1 243 LYS 243 243 243 LYS LYS B . n A 1 244 SER 244 244 244 SER SER B . n A 1 245 ILE 245 245 245 ILE ILE B . n A 1 246 GLY 246 246 246 GLY GLY B . n A 1 247 ARG 247 247 247 ARG ARG B . n A 1 248 ILE 248 248 248 ILE ILE B . n A 1 249 VAL 249 249 249 VAL VAL B . n A 1 250 THR 250 250 250 THR THR B . n A 1 251 MET 251 251 251 MET MET B . n A 1 252 LYS 252 252 252 LYS LYS B . n A 1 253 ARG 253 253 253 ARG ARG B . n A 1 254 ASN 254 254 254 ASN ASN B . n A 1 255 SER 255 255 255 SER SER B . n A 1 256 ARG 256 256 256 ARG ARG B . n A 1 257 ASN 257 257 257 ASN ASN B . n A 1 258 LEU 258 258 258 LEU LEU B . n A 1 259 GLU 259 259 259 GLU GLU B . n A 1 260 GLU 260 260 260 GLU GLU B . n A 1 261 ILE 261 261 261 ILE ILE B . n A 1 262 LYS 262 262 262 LYS LYS B . n A 1 263 PRO 263 263 263 PRO PRO B . n A 1 264 TYR 264 264 264 TYR TYR B . n A 1 265 LEU 265 265 265 LEU LEU B . n A 1 266 PHE 266 266 266 PHE PHE B . n A 1 267 ARG 267 267 267 ARG ARG B . n A 1 268 ALA 268 268 268 ALA ALA B . n A 1 269 ILE 269 269 269 ILE ILE B . n A 1 270 GLU 270 270 270 GLU GLU B . n A 1 271 GLU 271 271 271 GLU GLU B . n A 1 272 SER 272 272 272 SER SER B . n A 1 273 TYR 273 273 273 TYR TYR B . n A 1 274 TYR 274 274 274 TYR TYR B . n A 1 275 LYS 275 275 275 LYS LYS B . n A 1 276 LEU 276 276 276 LEU LEU B . n A 1 277 ASP 277 277 277 ASP ASP B . n A 1 278 LYS 278 278 278 LYS LYS B . n A 1 279 ARG 279 279 279 ARG ARG B . n A 1 280 ILE 280 280 280 ILE ILE B . n A 1 281 PRO 281 281 281 PRO PRO B . n A 1 282 LYS 282 282 282 LYS LYS B . n A 1 283 ALA 283 283 283 ALA ALA B . n A 1 284 ILE 284 284 284 ILE ILE B . n A 1 285 HIS 285 285 285 HIS HIS B . n A 1 286 VAL 286 286 286 VAL VAL B . n A 1 287 VAL 287 287 287 VAL VAL B . n A 1 288 ALA 288 288 288 ALA ALA B . n A 1 289 VAL 289 289 289 VAL VAL B . n A 1 290 THR 290 290 290 THR THR B . n A 1 291 GLU 291 291 291 GLU GLU B . n A 1 292 ASP 292 292 292 ASP ASP B . n A 1 293 LEU 293 293 293 LEU LEU B . n A 1 294 ASP 294 294 294 ASP ASP B . n A 1 295 ILE 295 295 295 ILE ILE B . n A 1 296 VAL 296 296 296 VAL VAL B . n A 1 297 SER 297 297 297 SER SER B . n A 1 298 ARG 298 298 298 ARG ARG B . n A 1 299 GLY 299 299 299 GLY GLY B . n A 1 300 ARG 300 300 300 ARG ARG B . n A 1 301 THR 301 301 301 THR THR B . n A 1 302 PHE 302 302 302 PHE PHE B . n A 1 303 PRO 303 303 303 PRO PRO B . n A 1 304 HIS 304 304 304 HIS HIS B . n A 1 305 GLY 305 305 305 GLY GLY B . n A 1 306 ILE 306 306 306 ILE ILE B . n A 1 307 SER 307 307 307 SER SER B . n A 1 308 LYS 308 308 308 LYS LYS B . n A 1 309 GLU 309 309 309 GLU GLU B . n A 1 310 THR 310 310 310 THR THR B . n A 1 311 ALA 311 311 311 ALA ALA B . n A 1 312 TYR 312 312 312 TYR TYR B . n A 1 313 SER 313 313 313 SER SER B . n A 1 314 GLU 314 314 314 GLU GLU B . n A 1 315 SER 315 315 315 SER SER B . n A 1 316 VAL 316 316 316 VAL VAL B . n A 1 317 LYS 317 317 317 LYS LYS B . n A 1 318 LEU 318 318 318 LEU LEU B . n A 1 319 LEU 319 319 319 LEU LEU B . n A 1 320 GLN 320 320 320 GLN GLN B . n A 1 321 LYS 321 321 321 LYS LYS B . n A 1 322 ILE 322 322 322 ILE ILE B . n A 1 323 LEU 323 323 323 LEU LEU B . n A 1 324 GLU 324 324 324 GLU GLU B . n A 1 325 GLU 325 325 325 GLU GLU B . n A 1 326 ASP 326 326 326 ASP ASP B . n A 1 327 GLU 327 327 327 GLU GLU B . n A 1 328 ARG 328 328 328 ARG ARG B . n A 1 329 LYS 329 329 329 LYS LYS B . n A 1 330 ILE 330 330 330 ILE ILE B . n A 1 331 ARG 331 331 331 ARG ARG B . n A 1 332 ARG 332 332 332 ARG ARG B . n A 1 333 ILE 333 333 333 ILE ILE B . n A 1 334 GLY 334 334 334 GLY GLY B . n A 1 335 VAL 335 335 335 VAL VAL B . n A 1 336 ARG 336 336 336 ARG ARG B . n A 1 337 PHE 337 337 337 PHE PHE B . n A 1 338 SER 338 338 338 SER SER B . n A 1 339 LYS 339 339 339 LYS LYS B . n A 1 340 PHE 340 340 340 PHE PHE B . n A 1 341 ILE 341 341 341 ILE ILE B . n A 1 342 GLU 342 342 ? ? ? B . n A 1 343 ALA 343 343 ? ? ? B . n A 1 344 ILE 344 344 ? ? ? B . n A 1 345 GLY 345 345 ? ? ? B . n A 1 346 LEU 346 346 ? ? ? B . n A 1 347 ASP 347 347 ? ? ? B . n A 1 348 LYS 348 348 ? ? ? B . n A 1 349 PHE 349 349 ? ? ? B . n A 1 350 PHE 350 350 ? ? ? B . n A 1 351 ASP 351 351 ? ? ? B . n A 1 352 THR 352 352 ? ? ? B . n B 2 1 DG 1 1 1 DG DG P . n B 2 2 DG 2 2 2 DG DG P . n B 2 3 DG 3 3 3 DG DG P . n B 2 4 DA 4 4 4 DA DA P . n B 2 5 DA 5 5 5 DA DA P . n B 2 6 DG 6 6 6 DG DG P . n B 2 7 DG 7 7 7 DG DG P . n B 2 8 DA 8 8 8 DA DA P . n B 2 9 DA 9 9 9 DA DA P . n B 2 10 DA 10 10 10 DA DA P . n B 2 11 DG 11 11 11 DG DG P . n B 2 12 DC 12 12 12 DC DC P . n B 2 13 DC 13 13 13 DC DC P . n C 3 1 DT 1 1 1 DT DT T . n C 3 2 DC 2 2 2 DC DC T . n C 3 3 DT 3 3 3 DT DT T . n C 3 4 DG 4 4 4 DG DG T . n C 3 5 DG 5 5 5 DG DG T . n C 3 6 DC 6 6 6 DC DC T . n C 3 7 DT 7 7 7 DT DT T . n C 3 8 DT 8 8 8 DT DT T . n C 3 9 DT 9 9 9 DT DT T . n C 3 10 DC 10 10 10 DC DC T . n C 3 11 DC 11 11 11 DC DC T . n C 3 12 DT 12 12 12 DT DT T . n C 3 13 DT 13 13 13 DT DT T . n C 3 14 DC 14 14 14 DC DC T . n C 3 15 DC 15 15 15 DC DC T . n C 3 16 DC 16 16 16 DC DC T . n C 3 17 DC 17 17 17 DC DC T . n C 3 18 DC 18 18 18 DC DC T . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 CA 1 4001 4001 CA CA B . E 4 CA 1 4002 4002 CA CA B . F 4 CA 1 4003 4003 CA CA B . G 5 ATP 1 2001 2001 ATP ATP B . H 6 CPT 1 1005 1005 CPT CPT T . I 4 CA 1 4004 4004 CA CA T . J 7 HOH 1 353 353 HOH HOH B . J 7 HOH 2 354 354 HOH HOH B . J 7 HOH 3 355 355 HOH HOH B . J 7 HOH 4 356 356 HOH HOH B . J 7 HOH 5 357 357 HOH HOH B . J 7 HOH 6 358 358 HOH HOH B . J 7 HOH 7 359 359 HOH HOH B . J 7 HOH 8 360 360 HOH HOH B . J 7 HOH 9 361 361 HOH HOH B . J 7 HOH 10 362 362 HOH HOH B . J 7 HOH 11 363 363 HOH HOH B . J 7 HOH 12 364 364 HOH HOH B . J 7 HOH 13 365 365 HOH HOH B . J 7 HOH 14 366 366 HOH HOH B . J 7 HOH 15 367 367 HOH HOH B . J 7 HOH 16 368 368 HOH HOH B . J 7 HOH 17 369 369 HOH HOH B . J 7 HOH 18 370 370 HOH HOH B . J 7 HOH 19 371 371 HOH HOH B . J 7 HOH 20 372 372 HOH HOH B . J 7 HOH 21 373 373 HOH HOH B . J 7 HOH 22 374 374 HOH HOH B . J 7 HOH 23 375 375 HOH HOH B . J 7 HOH 24 376 376 HOH HOH B . J 7 HOH 25 377 377 HOH HOH B . J 7 HOH 26 378 378 HOH HOH B . J 7 HOH 27 379 379 HOH HOH B . J 7 HOH 28 380 380 HOH HOH B . J 7 HOH 29 381 381 HOH HOH B . J 7 HOH 30 382 382 HOH HOH B . J 7 HOH 31 383 383 HOH HOH B . J 7 HOH 32 384 384 HOH HOH B . J 7 HOH 33 385 385 HOH HOH B . J 7 HOH 34 386 386 HOH HOH B . J 7 HOH 35 387 387 HOH HOH B . J 7 HOH 36 388 388 HOH HOH B . J 7 HOH 37 389 389 HOH HOH B . J 7 HOH 38 390 390 HOH HOH B . J 7 HOH 39 391 391 HOH HOH B . J 7 HOH 40 392 392 HOH HOH B . J 7 HOH 41 393 393 HOH HOH B . J 7 HOH 42 394 394 HOH HOH B . J 7 HOH 43 395 395 HOH HOH B . J 7 HOH 44 396 396 HOH HOH B . J 7 HOH 45 397 397 HOH HOH B . J 7 HOH 46 398 398 HOH HOH B . J 7 HOH 47 399 399 HOH HOH B . J 7 HOH 48 400 400 HOH HOH B . J 7 HOH 49 401 401 HOH HOH B . J 7 HOH 50 402 402 HOH HOH B . J 7 HOH 51 403 403 HOH HOH B . J 7 HOH 52 404 404 HOH HOH B . J 7 HOH 53 405 405 HOH HOH B . J 7 HOH 54 406 406 HOH HOH B . J 7 HOH 55 407 407 HOH HOH B . J 7 HOH 56 408 408 HOH HOH B . J 7 HOH 57 409 409 HOH HOH B . J 7 HOH 58 410 410 HOH HOH B . J 7 HOH 59 411 411 HOH HOH B . J 7 HOH 60 412 412 HOH HOH B . J 7 HOH 61 413 413 HOH HOH B . J 7 HOH 62 414 414 HOH HOH B . J 7 HOH 63 415 415 HOH HOH B . J 7 HOH 64 416 416 HOH HOH B . J 7 HOH 65 417 417 HOH HOH B . J 7 HOH 66 418 418 HOH HOH B . J 7 HOH 67 419 419 HOH HOH B . J 7 HOH 68 420 420 HOH HOH B . J 7 HOH 69 421 421 HOH HOH B . J 7 HOH 70 422 422 HOH HOH B . J 7 HOH 71 423 423 HOH HOH B . J 7 HOH 72 424 424 HOH HOH B . J 7 HOH 73 425 425 HOH HOH B . J 7 HOH 74 426 426 HOH HOH B . J 7 HOH 75 427 427 HOH HOH B . J 7 HOH 76 428 428 HOH HOH B . J 7 HOH 77 429 429 HOH HOH B . J 7 HOH 78 430 430 HOH HOH B . J 7 HOH 79 431 431 HOH HOH B . J 7 HOH 80 432 432 HOH HOH B . J 7 HOH 81 433 433 HOH HOH B . J 7 HOH 82 434 434 HOH HOH B . J 7 HOH 83 435 435 HOH HOH B . J 7 HOH 84 436 436 HOH HOH B . J 7 HOH 85 437 437 HOH HOH B . J 7 HOH 86 438 438 HOH HOH B . J 7 HOH 87 439 439 HOH HOH B . J 7 HOH 88 440 440 HOH HOH B . J 7 HOH 89 441 441 HOH HOH B . J 7 HOH 90 442 442 HOH HOH B . J 7 HOH 91 443 443 HOH HOH B . J 7 HOH 92 444 444 HOH HOH B . J 7 HOH 93 445 445 HOH HOH B . J 7 HOH 94 446 446 HOH HOH B . J 7 HOH 95 447 447 HOH HOH B . J 7 HOH 96 448 448 HOH HOH B . J 7 HOH 97 449 449 HOH HOH B . J 7 HOH 98 450 450 HOH HOH B . J 7 HOH 99 451 451 HOH HOH B . J 7 HOH 100 452 452 HOH HOH B . J 7 HOH 101 453 453 HOH HOH B . J 7 HOH 102 454 454 HOH HOH B . J 7 HOH 103 455 455 HOH HOH B . J 7 HOH 104 456 456 HOH HOH B . J 7 HOH 105 457 457 HOH HOH B . J 7 HOH 106 458 458 HOH HOH B . J 7 HOH 107 459 459 HOH HOH B . J 7 HOH 108 460 460 HOH HOH B . J 7 HOH 109 461 461 HOH HOH B . J 7 HOH 110 462 462 HOH HOH B . J 7 HOH 111 463 463 HOH HOH B . J 7 HOH 112 464 464 HOH HOH B . J 7 HOH 113 465 465 HOH HOH B . J 7 HOH 114 466 466 HOH HOH B . J 7 HOH 115 467 467 HOH HOH B . J 7 HOH 116 468 468 HOH HOH B . J 7 HOH 117 469 469 HOH HOH B . J 7 HOH 118 470 470 HOH HOH B . J 7 HOH 119 471 471 HOH HOH B . J 7 HOH 120 472 472 HOH HOH B . J 7 HOH 121 473 473 HOH HOH B . J 7 HOH 122 474 474 HOH HOH B . J 7 HOH 123 475 475 HOH HOH B . J 7 HOH 124 476 476 HOH HOH B . J 7 HOH 125 477 477 HOH HOH B . J 7 HOH 126 478 478 HOH HOH B . J 7 HOH 127 479 479 HOH HOH B . J 7 HOH 128 480 480 HOH HOH B . J 7 HOH 129 481 481 HOH HOH B . J 7 HOH 130 482 482 HOH HOH B . J 7 HOH 131 483 483 HOH HOH B . J 7 HOH 132 484 484 HOH HOH B . J 7 HOH 133 485 485 HOH HOH B . J 7 HOH 134 486 486 HOH HOH B . J 7 HOH 135 487 487 HOH HOH B . J 7 HOH 136 488 488 HOH HOH B . J 7 HOH 137 489 489 HOH HOH B . J 7 HOH 138 490 490 HOH HOH B . J 7 HOH 139 491 491 HOH HOH B . J 7 HOH 140 492 492 HOH HOH B . J 7 HOH 141 493 493 HOH HOH B . J 7 HOH 142 494 494 HOH HOH B . J 7 HOH 143 495 495 HOH HOH B . J 7 HOH 144 496 496 HOH HOH B . J 7 HOH 145 497 497 HOH HOH B . J 7 HOH 146 498 498 HOH HOH B . J 7 HOH 147 499 499 HOH HOH B . J 7 HOH 148 500 500 HOH HOH B . J 7 HOH 149 501 501 HOH HOH B . J 7 HOH 150 502 502 HOH HOH B . J 7 HOH 151 503 503 HOH HOH B . J 7 HOH 152 504 504 HOH HOH B . J 7 HOH 153 505 505 HOH HOH B . J 7 HOH 154 506 506 HOH HOH B . J 7 HOH 155 507 507 HOH HOH B . J 7 HOH 156 508 508 HOH HOH B . J 7 HOH 157 509 509 HOH HOH B . J 7 HOH 158 510 510 HOH HOH B . J 7 HOH 159 511 511 HOH HOH B . J 7 HOH 160 512 512 HOH HOH B . J 7 HOH 161 513 513 HOH HOH B . J 7 HOH 162 514 514 HOH HOH B . J 7 HOH 163 515 515 HOH HOH B . J 7 HOH 164 516 516 HOH HOH B . J 7 HOH 165 517 517 HOH HOH B . J 7 HOH 166 518 518 HOH HOH B . J 7 HOH 167 519 519 HOH HOH B . J 7 HOH 168 520 520 HOH HOH B . J 7 HOH 169 521 521 HOH HOH B . J 7 HOH 170 522 522 HOH HOH B . J 7 HOH 171 523 523 HOH HOH B . J 7 HOH 172 524 524 HOH HOH B . J 7 HOH 173 525 525 HOH HOH B . J 7 HOH 174 526 526 HOH HOH B . J 7 HOH 175 527 527 HOH HOH B . J 7 HOH 176 528 528 HOH HOH B . J 7 HOH 177 529 529 HOH HOH B . J 7 HOH 178 530 530 HOH HOH B . J 7 HOH 179 531 531 HOH HOH B . J 7 HOH 180 532 532 HOH HOH B . J 7 HOH 181 533 533 HOH HOH B . J 7 HOH 182 534 534 HOH HOH B . J 7 HOH 183 535 535 HOH HOH B . J 7 HOH 184 536 536 HOH HOH B . J 7 HOH 185 537 537 HOH HOH B . J 7 HOH 186 538 538 HOH HOH B . J 7 HOH 187 539 539 HOH HOH B . J 7 HOH 188 540 540 HOH HOH B . J 7 HOH 189 541 541 HOH HOH B . J 7 HOH 190 542 542 HOH HOH B . J 7 HOH 191 543 543 HOH HOH B . J 7 HOH 192 544 544 HOH HOH B . J 7 HOH 193 545 545 HOH HOH B . K 7 HOH 1 14 14 HOH HOH P . K 7 HOH 2 15 15 HOH HOH P . K 7 HOH 3 36 36 HOH HOH P . K 7 HOH 4 56 56 HOH HOH P . K 7 HOH 5 86 86 HOH HOH P . K 7 HOH 6 91 91 HOH HOH P . K 7 HOH 7 94 94 HOH HOH P . K 7 HOH 8 95 95 HOH HOH P . K 7 HOH 9 100 100 HOH HOH P . K 7 HOH 10 104 104 HOH HOH P . K 7 HOH 11 111 111 HOH HOH P . K 7 HOH 12 118 118 HOH HOH P . K 7 HOH 13 121 121 HOH HOH P . K 7 HOH 14 123 123 HOH HOH P . K 7 HOH 15 129 129 HOH HOH P . K 7 HOH 16 130 130 HOH HOH P . K 7 HOH 17 132 132 HOH HOH P . K 7 HOH 18 133 133 HOH HOH P . K 7 HOH 19 135 135 HOH HOH P . K 7 HOH 20 151 151 HOH HOH P . K 7 HOH 21 161 161 HOH HOH P . K 7 HOH 22 164 164 HOH HOH P . K 7 HOH 23 187 187 HOH HOH P . K 7 HOH 24 197 197 HOH HOH P . K 7 HOH 25 209 209 HOH HOH P . K 7 HOH 26 214 214 HOH HOH P . K 7 HOH 27 223 223 HOH HOH P . K 7 HOH 28 229 229 HOH HOH P . K 7 HOH 29 259 259 HOH HOH P . K 7 HOH 30 261 261 HOH HOH P . K 7 HOH 31 264 264 HOH HOH P . K 7 HOH 32 270 270 HOH HOH P . L 7 HOH 1 19 19 HOH HOH T . L 7 HOH 2 20 20 HOH HOH T . L 7 HOH 3 21 21 HOH HOH T . L 7 HOH 4 57 57 HOH HOH T . L 7 HOH 5 64 64 HOH HOH T . L 7 HOH 6 88 88 HOH HOH T . L 7 HOH 7 89 89 HOH HOH T . L 7 HOH 8 90 90 HOH HOH T . L 7 HOH 9 92 92 HOH HOH T . L 7 HOH 10 93 93 HOH HOH T . L 7 HOH 11 102 102 HOH HOH T . L 7 HOH 12 119 119 HOH HOH T . L 7 HOH 13 122 122 HOH HOH T . L 7 HOH 14 126 126 HOH HOH T . L 7 HOH 15 127 127 HOH HOH T . L 7 HOH 16 131 131 HOH HOH T . L 7 HOH 17 138 138 HOH HOH T . L 7 HOH 18 150 150 HOH HOH T . L 7 HOH 19 162 162 HOH HOH T . L 7 HOH 20 172 172 HOH HOH T . L 7 HOH 21 196 196 HOH HOH T . L 7 HOH 22 212 212 HOH HOH T . L 7 HOH 23 217 217 HOH HOH T . L 7 HOH 24 218 218 HOH HOH T . L 7 HOH 25 221 221 HOH HOH T . L 7 HOH 26 225 225 HOH HOH T . L 7 HOH 27 227 227 HOH HOH T . L 7 HOH 28 242 242 HOH HOH T . L 7 HOH 29 245 245 HOH HOH T . L 7 HOH 30 251 251 HOH HOH T . L 7 HOH 31 255 255 HOH HOH T . L 7 HOH 32 258 258 HOH HOH T . L 7 HOH 33 288 288 HOH HOH T . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B GLU 97 ? CG ? A GLU 97 CG 2 1 Y 1 B GLU 97 ? CD ? A GLU 97 CD 3 1 Y 1 B GLU 97 ? OE1 ? A GLU 97 OE1 4 1 Y 1 B GLU 97 ? OE2 ? A GLU 97 OE2 5 1 Y 1 B ARG 116 ? CG ? A ARG 116 CG 6 1 Y 1 B ARG 116 ? CD ? A ARG 116 CD 7 1 Y 1 B ARG 116 ? NE ? A ARG 116 NE 8 1 Y 1 B ARG 116 ? CZ ? A ARG 116 CZ 9 1 Y 1 B ARG 116 ? NH1 ? A ARG 116 NH1 10 1 Y 1 B ARG 116 ? NH2 ? A ARG 116 NH2 11 1 Y 1 B GLU 169 ? CG ? A GLU 169 CG 12 1 Y 1 B GLU 169 ? CD ? A GLU 169 CD 13 1 Y 1 B GLU 169 ? OE1 ? A GLU 169 OE1 14 1 Y 1 B GLU 169 ? OE2 ? A GLU 169 OE2 15 1 Y 1 B GLU 192 ? CG ? A GLU 192 CG 16 1 Y 1 B GLU 192 ? CD ? A GLU 192 CD 17 1 Y 1 B GLU 192 ? OE1 ? A GLU 192 OE1 18 1 Y 1 B GLU 192 ? OE2 ? A GLU 192 OE2 19 1 Y 1 B LYS 195 ? CG ? A LYS 195 CG 20 1 Y 1 B LYS 195 ? CD ? A LYS 195 CD 21 1 Y 1 B LYS 195 ? CE ? A LYS 195 CE 22 1 Y 1 B LYS 195 ? NZ ? A LYS 195 NZ 23 1 Y 1 B ARG 238 ? CG ? A ARG 238 CG 24 1 Y 1 B ARG 238 ? CD ? A ARG 238 CD 25 1 Y 1 B ARG 238 ? NE ? A ARG 238 NE 26 1 Y 1 B ARG 238 ? CZ ? A ARG 238 CZ 27 1 Y 1 B ARG 238 ? NH1 ? A ARG 238 NH1 28 1 Y 1 B ARG 238 ? NH2 ? A ARG 238 NH2 29 1 Y 1 B GLU 327 ? CG ? A GLU 327 CG 30 1 Y 1 B GLU 327 ? CD ? A GLU 327 CD 31 1 Y 1 B GLU 327 ? OE1 ? A GLU 327 OE1 32 1 Y 1 B GLU 327 ? OE2 ? A GLU 327 OE2 33 1 Y 1 P DC 13 ? "O3'" ? B DC 13 "O3'" 34 1 N 1 B ATP 2001 ? "O2'" ? G ATP 1 "O2'" # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 CNS . ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns-online.org/ Fortran_77 ? 4 PDB_EXTRACT 3.100 'Jan. 22, 2010' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 HKL-2000 . ? ? ? ? 'data collection' ? ? ? 6 CNS . ? ? ? ? phasing ? ? ? # _cell.entry_id 3M9O _cell.length_a 99.238 _cell.length_b 103.683 _cell.length_c 51.968 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3M9O _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 3M9O _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.69 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 54.26 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'hanging drop' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details '0.2M calcium acetate, 5% glycerol, 15% PEG 3350, 200mM NaCl, pH 7.5, hanging drop, temperature 298K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC Q315' _diffrn_detector.pdbx_collection_date 2007-11-28 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Cryo-Cooled Si(111) double crystal' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97949 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.pdbx_wavelength_list 0.97949 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 24-ID-C # _reflns.entry_id 3M9O _reflns.d_resolution_high 2.000 _reflns.d_resolution_low 50.000 _reflns.number_obs 36736 _reflns.pdbx_Rmerge_I_obs 0.087 _reflns.pdbx_netI_over_sigmaI 9.100 _reflns.pdbx_chi_squared 1.139 _reflns.pdbx_redundancy 8.000 _reflns.percent_possible_obs 99.700 _reflns.observed_criterion_sigma_F 1 _reflns.observed_criterion_sigma_I 1 _reflns.number_all 36847 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 2.00 2.03 ? ? ? 0.722 ? ? 0.879 6.20 ? 1728 95.40 ? 1 2.03 2.07 ? ? ? 0.640 ? ? 0.909 7.50 ? 1807 99.80 ? 2 2.07 2.11 ? ? ? 0.573 ? ? 0.937 8.00 ? 1801 100.00 ? 3 2.11 2.15 ? ? ? 0.441 ? ? 0.982 8.10 ? 1818 100.00 ? 4 2.15 2.20 ? ? ? 0.372 ? ? 0.993 8.20 ? 1801 100.00 ? 5 2.20 2.25 ? ? ? 0.326 ? ? 0.951 8.20 ? 1829 100.00 ? 6 2.25 2.31 ? ? ? 0.275 ? ? 0.917 8.20 ? 1810 100.00 ? 7 2.31 2.37 ? ? ? 0.233 ? ? 0.963 8.20 ? 1815 100.00 ? 8 2.37 2.44 ? ? ? 0.201 ? ? 1.017 8.20 ? 1803 100.00 ? 9 2.44 2.52 ? ? ? 0.178 ? ? 1.024 8.20 ? 1847 100.00 ? 10 2.52 2.61 ? ? ? 0.151 ? ? 1.086 8.20 ? 1830 100.00 ? 11 2.61 2.71 ? ? ? 0.134 ? ? 1.111 8.20 ? 1832 100.00 ? 12 2.71 2.84 ? ? ? 0.112 ? ? 1.208 8.20 ? 1816 100.00 ? 13 2.84 2.99 ? ? ? 0.096 ? ? 1.319 8.10 ? 1847 100.00 ? 14 2.99 3.17 ? ? ? 0.080 ? ? 1.407 8.10 ? 1841 100.00 ? 15 3.17 3.42 ? ? ? 0.071 ? ? 1.494 8.10 ? 1865 100.00 ? 16 3.42 3.76 ? ? ? 0.068 ? ? 1.509 8.00 ? 1860 100.00 ? 17 3.76 4.31 ? ? ? 0.070 ? ? 1.561 7.90 ? 1880 100.00 ? 18 4.31 5.43 ? ? ? 0.054 ? ? 1.122 7.80 ? 1892 99.90 ? 19 5.43 50.00 ? ? ? 0.045 ? ? 1.275 7.50 ? 2014 99.50 ? 20 # _refine.entry_id 3M9O _refine.ls_d_res_high 2.000 _refine.ls_d_res_low 29.000 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 94.200 _refine.ls_number_reflns_obs 34839 _refine.ls_number_reflns_all 36984 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all 0.224 _refine.ls_R_factor_obs 0.224 _refine.ls_R_factor_R_work 0.224 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.235 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 2.000 _refine.ls_number_reflns_R_free 740 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 35.370 _refine.solvent_model_param_bsol 34.862 _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -3.588 _refine.aniso_B[2][2] 2.061 _refine.aniso_B[3][3] 1.527 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.solvent_model_details ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB ENTRY 1JX4' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.845 _refine.B_iso_max 84.46 _refine.B_iso_min 16.54 _refine.occupancy_max 1.00 _refine.occupancy_min 1.00 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2711 _refine_hist.pdbx_number_atoms_nucleic_acid 623 _refine_hist.pdbx_number_atoms_ligand 37 _refine_hist.number_atoms_solvent 258 _refine_hist.number_atoms_total 3629 _refine_hist.d_res_high 2.000 _refine_hist.d_res_low 29.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_mcbond_it ? 1.385 1.500 ? 'X-RAY DIFFRACTION' ? c_scbond_it ? 2.240 2.000 ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? 2.203 2.000 ? 'X-RAY DIFFRACTION' ? c_scangle_it ? 3.447 2.500 ? 'X-RAY DIFFRACTION' ? c_bond_d ? 0.015 ? ? 'X-RAY DIFFRACTION' ? c_angle_deg ? 1.64 ? ? 'X-RAY DIFFRACTION' ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 CNS_TOPPAR:protein_rep.param ? 'X-RAY DIFFRACTION' 2 dna-rna_jw_033009_gg3.param ? 'X-RAY DIFFRACTION' 3 CNS_TOPPAR:ion.param ? 'X-RAY DIFFRACTION' 4 CNS_TOPPAR:water_rep.param ? 'X-RAY DIFFRACTION' 5 ATP_par.txt ? 'X-RAY DIFFRACTION' # _struct.entry_id 3M9O _struct.title 'Crystal Structure of Dpo4 in complex with DNA containing the major cisplatin lesion' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3M9O _struct_keywords.text ;Dpo4, translesion DNA synthesis, TLS, cisplatin, Y-family DNA polymerase, protein-DNA complex, DNA, DNA damage, DNA repair, DNA replication, DNA-binding, DNA-directed DNA polymerase, Magnesium, Metal-binding, Mutator protein, Nucleotidyltransferase, Transferase, Transferase-DNA complex ; _struct_keywords.pdbx_keywords Transferase/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 6 ? I N N 4 ? J N N 7 ? K N N 7 ? L N N 7 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP DPO42_SULSO Q97W02 1 ;MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEV YQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKP NGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTR VRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQ KILEEDERKIRRIGVRFSKFIEAIGLDKFFDT ; 1 ? 2 PDB 3M9O 3M9O 2 GGGAAGGAAAGCC 1 ? 3 PDB 3M9O 3M9O 3 TCTGGCTTTCCTTCCCCC 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3M9O B 1 ? 352 ? Q97W02 1 ? 352 ? 1 352 2 2 3M9O P 1 ? 13 ? 3M9O 1 ? 13 ? 1 13 3 3 3M9O T 1 ? 18 ? 3M9O 1 ? 18 ? 1 18 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5990 ? 1 MORE -87 ? 1 'SSA (A^2)' 19720 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TYR A 10 ? ASN A 20 ? TYR B 10 ASN B 20 1 ? 11 HELX_P HELX_P2 2 PRO A 21 ? LYS A 24 ? PRO B 21 LYS B 24 5 ? 4 HELX_P HELX_P3 3 ASN A 47 ? LYS A 52 ? ASN B 47 LYS B 52 1 ? 6 HELX_P HELX_P4 4 PRO A 60 ? LEU A 68 ? PRO B 60 LEU B 68 1 ? 9 HELX_P HELX_P5 5 ARG A 77 ? ARG A 93 ? ARG B 77 ARG B 93 1 ? 17 HELX_P HELX_P6 6 GLU A 94 ? SER A 96 ? GLU B 94 SER B 96 5 ? 3 HELX_P HELX_P7 7 ASP A 117 ? LYS A 137 ? ASP B 117 LYS B 137 1 ? 21 HELX_P HELX_P8 8 ASN A 147 ? LYS A 159 ? ASN B 147 LYS B 159 1 ? 13 HELX_P HELX_P9 9 ASP A 167 ? LEU A 178 ? ASP B 167 LEU B 178 1 ? 12 HELX_P HELX_P10 10 ASP A 179 ? VAL A 183 ? ASP B 179 VAL B 183 5 ? 5 HELX_P HELX_P11 11 GLY A 187 ? LYS A 196 ? GLY B 187 LYS B 196 1 ? 10 HELX_P HELX_P12 12 LYS A 201 ? SER A 207 ? LYS B 201 SER B 207 5 ? 7 HELX_P HELX_P13 13 GLU A 209 ? GLY A 218 ? GLU B 209 GLY B 218 1 ? 10 HELX_P HELX_P14 14 GLY A 218 ? ARG A 230 ? GLY B 218 ARG B 230 1 ? 13 HELX_P HELX_P15 15 ASN A 257 ? ASP A 277 ? ASN B 257 ASP B 277 1 ? 21 HELX_P HELX_P16 16 SER A 307 ? ASP A 326 ? SER B 307 ASP B 326 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASP 7 OD1 ? ? ? 1_555 D CA . CA ? ? B ASP 7 B CA 4001 1_555 ? ? ? ? ? ? ? 2.419 ? ? metalc2 metalc ? ? A ASP 7 OD2 ? ? ? 1_555 F CA . CA ? ? B ASP 7 B CA 4003 1_555 ? ? ? ? ? ? ? 2.573 ? ? metalc3 metalc ? ? A PHE 8 O ? ? ? 1_555 D CA . CA ? ? B PHE 8 B CA 4001 1_555 ? ? ? ? ? ? ? 2.377 ? ? metalc4 metalc ? ? A ASP 105 OD2 ? ? ? 1_555 D CA . CA ? ? B ASP 105 B CA 4001 1_555 ? ? ? ? ? ? ? 2.372 ? ? metalc5 metalc ? ? A GLU 106 OE2 ? ? ? 1_555 F CA . CA ? ? B GLU 106 B CA 4003 1_555 ? ? ? ? ? ? ? 2.517 ? ? metalc6 metalc ? ? A ALA 181 O ? ? ? 1_555 E CA . CA ? ? B ALA 181 B CA 4002 1_555 ? ? ? ? ? ? ? 2.447 ? ? metalc7 metalc ? ? A ILE 186 O ? ? ? 1_555 E CA . CA ? ? B ILE 186 B CA 4002 1_555 ? ? ? ? ? ? ? 2.630 ? ? metalc8 metalc ? ? J HOH . O ? ? ? 1_555 F CA . CA ? ? B HOH 353 B CA 4003 1_555 ? ? ? ? ? ? ? 2.547 ? ? metalc9 metalc ? ? J HOH . O ? ? ? 1_555 F CA . CA ? ? B HOH 371 B CA 4003 1_555 ? ? ? ? ? ? ? 2.422 ? ? metalc10 metalc ? ? J HOH . O ? ? ? 1_555 F CA . CA ? ? B HOH 372 B CA 4003 1_555 ? ? ? ? ? ? ? 2.503 ? ? metalc11 metalc ? ? J HOH . O ? ? ? 1_555 E CA . CA ? ? B HOH 405 B CA 4002 1_555 ? ? ? ? ? ? ? 2.659 ? ? metalc12 metalc ? ? G ATP . O3G ? ? ? 1_555 D CA . CA ? ? B ATP 2001 B CA 4001 1_555 ? ? ? ? ? ? ? 2.200 ? ? metalc13 metalc ? ? G ATP . O2B ? ? ? 1_555 D CA . CA ? ? B ATP 2001 B CA 4001 1_555 ? ? ? ? ? ? ? 2.371 ? ? metalc14 metalc ? ? G ATP . O1A ? ? ? 1_555 D CA . CA ? ? B ATP 2001 B CA 4001 1_555 ? ? ? ? ? ? ? 2.441 ? ? metalc15 metalc ? ? E CA . CA ? ? ? 1_555 K HOH . O ? ? B CA 4002 P HOH 14 1_555 ? ? ? ? ? ? ? 2.684 ? ? metalc16 metalc ? ? E CA . CA ? ? ? 1_555 K HOH . O ? ? B CA 4002 P HOH 15 1_555 ? ? ? ? ? ? ? 2.719 ? ? metalc17 metalc ? ? E CA . CA ? ? ? 1_555 K HOH . O ? ? B CA 4002 P HOH 100 1_555 ? ? ? ? ? ? ? 2.723 ? ? metalc18 metalc ? ? F CA . CA ? ? ? 1_555 B DC 13 OP1 ? ? B CA 4003 P DC 13 1_555 ? ? ? ? ? ? ? 2.439 ? ? metalc19 metalc ? ? K HOH . O ? ? ? 1_555 I CA . CA ? ? P HOH 135 T CA 4004 1_555 ? ? ? ? ? ? ? 3.114 ? ? metalc20 metalc ? ? C DG 4 N7 ? ? ? 1_555 H CPT . PT1 ? ? T DG 4 T CPT 1005 1_555 ? ? ? ? ? ? ? 2.018 ? ? metalc21 metalc ? ? C DG 5 N7 ? ? ? 1_555 H CPT . PT1 ? ? T DG 5 T CPT 1005 1_555 ? ? ? ? ? ? ? 2.058 ? ? metalc22 metalc ? ? C DC 18 O2 ? ? ? 1_555 I CA . CA ? ? T DC 18 T CA 4004 1_555 ? ? ? ? ? ? ? 2.634 ? ? metalc23 metalc ? ? L HOH . O ? ? ? 1_555 I CA . CA ? ? T HOH 20 T CA 4004 1_555 ? ? ? ? ? ? ? 2.718 ? ? metalc24 metalc ? ? L HOH . O ? ? ? 1_555 I CA . CA ? ? T HOH 221 T CA 4004 1_555 ? ? ? ? ? ? ? 2.595 ? ? hydrog1 hydrog ? ? B DG 1 N1 ? ? ? 1_555 C DC 16 N3 ? ? P DG 1 T DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 1 N2 ? ? ? 1_555 C DC 16 O2 ? ? P DG 1 T DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 1 O6 ? ? ? 1_555 C DC 16 N4 ? ? P DG 1 T DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DG 2 N1 ? ? ? 1_555 C DC 15 N3 ? ? P DG 2 T DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DG 2 N2 ? ? ? 1_555 C DC 15 O2 ? ? P DG 2 T DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DG 2 O6 ? ? ? 1_555 C DC 15 N4 ? ? P DG 2 T DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DG 3 N1 ? ? ? 1_555 C DC 14 N3 ? ? P DG 3 T DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 3 N2 ? ? ? 1_555 C DC 14 O2 ? ? P DG 3 T DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 3 O6 ? ? ? 1_555 C DC 14 N4 ? ? P DG 3 T DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DG 3 N2 ? ? ? 1_555 C DC 18 N3 ? ? P DG 3 T DC 18 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog11 hydrog ? ? B DA 4 N1 ? ? ? 1_555 C DT 13 N3 ? ? P DA 4 T DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DA 4 N6 ? ? ? 1_555 C DT 13 O4 ? ? P DA 4 T DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DA 5 N1 ? ? ? 1_555 C DT 12 N3 ? ? P DA 5 T DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DA 5 N6 ? ? ? 1_555 C DT 12 O4 ? ? P DA 5 T DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DG 6 N1 ? ? ? 1_555 C DC 11 N3 ? ? P DG 6 T DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DG 6 N2 ? ? ? 1_555 C DC 11 O2 ? ? P DG 6 T DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DG 6 O6 ? ? ? 1_555 C DC 11 N4 ? ? P DG 6 T DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DG 7 N1 ? ? ? 1_555 C DC 10 N3 ? ? P DG 7 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DG 7 N2 ? ? ? 1_555 C DC 10 O2 ? ? P DG 7 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DG 7 O6 ? ? ? 1_555 C DC 10 N4 ? ? P DG 7 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DA 8 N1 ? ? ? 1_555 C DT 9 N3 ? ? P DA 8 T DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DA 8 N6 ? ? ? 1_555 C DT 9 O4 ? ? P DA 8 T DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DA 9 N1 ? ? ? 1_555 C DT 8 N3 ? ? P DA 9 T DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DA 9 N6 ? ? ? 1_555 C DT 8 O4 ? ? P DA 9 T DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DA 10 N1 ? ? ? 1_555 C DT 7 N3 ? ? P DA 10 T DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DA 10 N6 ? ? ? 1_555 C DT 7 O4 ? ? P DA 10 T DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DG 11 N1 ? ? ? 1_555 C DC 6 N3 ? ? P DG 11 T DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DG 11 N2 ? ? ? 1_555 C DC 6 O2 ? ? P DG 11 T DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DG 11 O6 ? ? ? 1_555 C DC 6 N4 ? ? P DG 11 T DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DC 12 N3 ? ? ? 1_555 C DG 5 N1 ? ? P DC 12 T DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DC 12 N4 ? ? ? 1_555 C DG 5 O6 ? ? P DC 12 T DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DC 12 O2 ? ? ? 1_555 C DG 5 N2 ? ? P DC 12 T DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DC 13 N3 ? ? ? 1_555 C DG 4 N1 ? ? P DC 13 T DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B DC 13 N4 ? ? ? 1_555 C DG 4 O6 ? ? P DC 13 T DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B DC 13 O2 ? ? ? 1_555 C DG 4 N2 ? ? P DC 13 T DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DC 15 O2 ? ? ? 1_555 C DC 17 N4 ? ? T DC 15 T DC 17 1_555 ? ? ? ? ? ? 'DC-DC MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 7 ? B ASP 7 ? 1_555 CA ? D CA . ? B CA 4001 ? 1_555 O ? A PHE 8 ? B PHE 8 ? 1_555 84.6 ? 2 OD1 ? A ASP 7 ? B ASP 7 ? 1_555 CA ? D CA . ? B CA 4001 ? 1_555 OD2 ? A ASP 105 ? B ASP 105 ? 1_555 97.3 ? 3 O ? A PHE 8 ? B PHE 8 ? 1_555 CA ? D CA . ? B CA 4001 ? 1_555 OD2 ? A ASP 105 ? B ASP 105 ? 1_555 86.0 ? 4 OD1 ? A ASP 7 ? B ASP 7 ? 1_555 CA ? D CA . ? B CA 4001 ? 1_555 O3G ? G ATP . ? B ATP 2001 ? 1_555 91.5 ? 5 O ? A PHE 8 ? B PHE 8 ? 1_555 CA ? D CA . ? B CA 4001 ? 1_555 O3G ? G ATP . ? B ATP 2001 ? 1_555 95.9 ? 6 OD2 ? A ASP 105 ? B ASP 105 ? 1_555 CA ? D CA . ? B CA 4001 ? 1_555 O3G ? G ATP . ? B ATP 2001 ? 1_555 171.1 ? 7 OD1 ? A ASP 7 ? B ASP 7 ? 1_555 CA ? D CA . ? B CA 4001 ? 1_555 O2B ? G ATP . ? B ATP 2001 ? 1_555 170.1 ? 8 O ? A PHE 8 ? B PHE 8 ? 1_555 CA ? D CA . ? B CA 4001 ? 1_555 O2B ? G ATP . ? B ATP 2001 ? 1_555 88.2 ? 9 OD2 ? A ASP 105 ? B ASP 105 ? 1_555 CA ? D CA . ? B CA 4001 ? 1_555 O2B ? G ATP . ? B ATP 2001 ? 1_555 88.8 ? 10 O3G ? G ATP . ? B ATP 2001 ? 1_555 CA ? D CA . ? B CA 4001 ? 1_555 O2B ? G ATP . ? B ATP 2001 ? 1_555 82.5 ? 11 OD1 ? A ASP 7 ? B ASP 7 ? 1_555 CA ? D CA . ? B CA 4001 ? 1_555 O1A ? G ATP . ? B ATP 2001 ? 1_555 113.1 ? 12 O ? A PHE 8 ? B PHE 8 ? 1_555 CA ? D CA . ? B CA 4001 ? 1_555 O1A ? G ATP . ? B ATP 2001 ? 1_555 162.0 ? 13 OD2 ? A ASP 105 ? B ASP 105 ? 1_555 CA ? D CA . ? B CA 4001 ? 1_555 O1A ? G ATP . ? B ATP 2001 ? 1_555 94.4 ? 14 O3G ? G ATP . ? B ATP 2001 ? 1_555 CA ? D CA . ? B CA 4001 ? 1_555 O1A ? G ATP . ? B ATP 2001 ? 1_555 81.1 ? 15 O2B ? G ATP . ? B ATP 2001 ? 1_555 CA ? D CA . ? B CA 4001 ? 1_555 O1A ? G ATP . ? B ATP 2001 ? 1_555 73.9 ? 16 OD2 ? A ASP 7 ? B ASP 7 ? 1_555 CA ? F CA . ? B CA 4003 ? 1_555 OE2 ? A GLU 106 ? B GLU 106 ? 1_555 103.4 ? 17 OD2 ? A ASP 7 ? B ASP 7 ? 1_555 CA ? F CA . ? B CA 4003 ? 1_555 O ? J HOH . ? B HOH 353 ? 1_555 88.0 ? 18 OE2 ? A GLU 106 ? B GLU 106 ? 1_555 CA ? F CA . ? B CA 4003 ? 1_555 O ? J HOH . ? B HOH 353 ? 1_555 87.3 ? 19 OD2 ? A ASP 7 ? B ASP 7 ? 1_555 CA ? F CA . ? B CA 4003 ? 1_555 O ? J HOH . ? B HOH 371 ? 1_555 80.3 ? 20 OE2 ? A GLU 106 ? B GLU 106 ? 1_555 CA ? F CA . ? B CA 4003 ? 1_555 O ? J HOH . ? B HOH 371 ? 1_555 107.0 ? 21 O ? J HOH . ? B HOH 353 ? 1_555 CA ? F CA . ? B CA 4003 ? 1_555 O ? J HOH . ? B HOH 371 ? 1_555 163.3 ? 22 OD2 ? A ASP 7 ? B ASP 7 ? 1_555 CA ? F CA . ? B CA 4003 ? 1_555 O ? J HOH . ? B HOH 372 ? 1_555 93.8 ? 23 OE2 ? A GLU 106 ? B GLU 106 ? 1_555 CA ? F CA . ? B CA 4003 ? 1_555 O ? J HOH . ? B HOH 372 ? 1_555 161.4 ? 24 O ? J HOH . ? B HOH 353 ? 1_555 CA ? F CA . ? B CA 4003 ? 1_555 O ? J HOH . ? B HOH 372 ? 1_555 86.3 ? 25 O ? J HOH . ? B HOH 371 ? 1_555 CA ? F CA . ? B CA 4003 ? 1_555 O ? J HOH . ? B HOH 372 ? 1_555 82.6 ? 26 OD2 ? A ASP 7 ? B ASP 7 ? 1_555 CA ? F CA . ? B CA 4003 ? 1_555 OP1 ? B DC 13 ? P DC 13 ? 1_555 161.7 ? 27 OE2 ? A GLU 106 ? B GLU 106 ? 1_555 CA ? F CA . ? B CA 4003 ? 1_555 OP1 ? B DC 13 ? P DC 13 ? 1_555 82.5 ? 28 O ? J HOH . ? B HOH 353 ? 1_555 CA ? F CA . ? B CA 4003 ? 1_555 OP1 ? B DC 13 ? P DC 13 ? 1_555 109.8 ? 29 O ? J HOH . ? B HOH 371 ? 1_555 CA ? F CA . ? B CA 4003 ? 1_555 OP1 ? B DC 13 ? P DC 13 ? 1_555 81.4 ? 30 O ? J HOH . ? B HOH 372 ? 1_555 CA ? F CA . ? B CA 4003 ? 1_555 OP1 ? B DC 13 ? P DC 13 ? 1_555 83.3 ? 31 O ? A ALA 181 ? B ALA 181 ? 1_555 CA ? E CA . ? B CA 4002 ? 1_555 O ? A ILE 186 ? B ILE 186 ? 1_555 82.5 ? 32 O ? A ALA 181 ? B ALA 181 ? 1_555 CA ? E CA . ? B CA 4002 ? 1_555 O ? J HOH . ? B HOH 405 ? 1_555 93.6 ? 33 O ? A ILE 186 ? B ILE 186 ? 1_555 CA ? E CA . ? B CA 4002 ? 1_555 O ? J HOH . ? B HOH 405 ? 1_555 73.0 ? 34 O ? A ALA 181 ? B ALA 181 ? 1_555 CA ? E CA . ? B CA 4002 ? 1_555 O ? K HOH . ? P HOH 14 ? 1_555 93.6 ? 35 O ? A ILE 186 ? B ILE 186 ? 1_555 CA ? E CA . ? B CA 4002 ? 1_555 O ? K HOH . ? P HOH 14 ? 1_555 143.1 ? 36 O ? J HOH . ? B HOH 405 ? 1_555 CA ? E CA . ? B CA 4002 ? 1_555 O ? K HOH . ? P HOH 14 ? 1_555 143.8 ? 37 O ? A ALA 181 ? B ALA 181 ? 1_555 CA ? E CA . ? B CA 4002 ? 1_555 O ? K HOH . ? P HOH 15 ? 1_555 80.8 ? 38 O ? A ILE 186 ? B ILE 186 ? 1_555 CA ? E CA . ? B CA 4002 ? 1_555 O ? K HOH . ? P HOH 15 ? 1_555 73.3 ? 39 O ? J HOH . ? B HOH 405 ? 1_555 CA ? E CA . ? B CA 4002 ? 1_555 O ? K HOH . ? P HOH 15 ? 1_555 146.3 ? 40 O ? K HOH . ? P HOH 14 ? 1_555 CA ? E CA . ? B CA 4002 ? 1_555 O ? K HOH . ? P HOH 15 ? 1_555 69.8 ? 41 O ? A ALA 181 ? B ALA 181 ? 1_555 CA ? E CA . ? B CA 4002 ? 1_555 O ? K HOH . ? P HOH 100 ? 1_555 159.6 ? 42 O ? A ILE 186 ? B ILE 186 ? 1_555 CA ? E CA . ? B CA 4002 ? 1_555 O ? K HOH . ? P HOH 100 ? 1_555 83.0 ? 43 O ? J HOH . ? B HOH 405 ? 1_555 CA ? E CA . ? B CA 4002 ? 1_555 O ? K HOH . ? P HOH 100 ? 1_555 95.8 ? 44 O ? K HOH . ? P HOH 14 ? 1_555 CA ? E CA . ? B CA 4002 ? 1_555 O ? K HOH . ? P HOH 100 ? 1_555 89.6 ? 45 O ? K HOH . ? P HOH 15 ? 1_555 CA ? E CA . ? B CA 4002 ? 1_555 O ? K HOH . ? P HOH 100 ? 1_555 81.4 ? 46 O ? K HOH . ? P HOH 135 ? 1_555 CA ? I CA . ? T CA 4004 ? 1_555 O2 ? C DC 18 ? T DC 18 ? 1_555 100.8 ? 47 O ? K HOH . ? P HOH 135 ? 1_555 CA ? I CA . ? T CA 4004 ? 1_555 O ? L HOH . ? T HOH 20 ? 1_555 91.3 ? 48 O2 ? C DC 18 ? T DC 18 ? 1_555 CA ? I CA . ? T CA 4004 ? 1_555 O ? L HOH . ? T HOH 20 ? 1_555 140.5 ? 49 O ? K HOH . ? P HOH 135 ? 1_555 CA ? I CA . ? T CA 4004 ? 1_555 O ? L HOH . ? T HOH 221 ? 1_555 155.5 ? 50 O2 ? C DC 18 ? T DC 18 ? 1_555 CA ? I CA . ? T CA 4004 ? 1_555 O ? L HOH . ? T HOH 221 ? 1_555 86.9 ? 51 O ? L HOH . ? T HOH 20 ? 1_555 CA ? I CA . ? T CA 4004 ? 1_555 O ? L HOH . ? T HOH 221 ? 1_555 97.4 ? 52 N7 ? C DG 4 ? T DG 4 ? 1_555 PT1 ? H CPT . ? T CPT 1005 ? 1_555 N1 ? H CPT . ? T CPT 1005 ? 1_555 170.2 ? 53 N7 ? C DG 4 ? T DG 4 ? 1_555 PT1 ? H CPT . ? T CPT 1005 ? 1_555 N2 ? H CPT . ? T CPT 1005 ? 1_555 82.8 ? 54 N1 ? H CPT . ? T CPT 1005 ? 1_555 PT1 ? H CPT . ? T CPT 1005 ? 1_555 N2 ? H CPT . ? T CPT 1005 ? 1_555 95.3 ? 55 N7 ? C DG 4 ? T DG 4 ? 1_555 PT1 ? H CPT . ? T CPT 1005 ? 1_555 N7 ? C DG 5 ? T DG 5 ? 1_555 95.5 ? 56 N1 ? H CPT . ? T CPT 1005 ? 1_555 PT1 ? H CPT . ? T CPT 1005 ? 1_555 N7 ? C DG 5 ? T DG 5 ? 1_555 86.0 ? 57 N2 ? H CPT . ? T CPT 1005 ? 1_555 PT1 ? H CPT . ? T CPT 1005 ? 1_555 N7 ? C DG 5 ? T DG 5 ? 1_555 177.0 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LYS _struct_mon_prot_cis.label_seq_id 159 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LYS _struct_mon_prot_cis.auth_seq_id 159 _struct_mon_prot_cis.auth_asym_id B _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 160 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 160 _struct_mon_prot_cis.pdbx_auth_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.14 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 3 ? C ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel B 1 2 ? anti-parallel B 2 3 ? parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 99 ? SER A 103 ? ILE B 99 SER B 103 A 2 GLU A 106 ? ASP A 110 ? GLU B 106 ASP B 110 A 3 VAL A 3 ? PHE A 8 ? VAL B 3 PHE B 8 A 4 VAL A 140 ? SER A 145 ? VAL B 140 SER B 145 A 5 ILE A 163 ? VAL A 165 ? ILE B 163 VAL B 165 B 1 GLY A 41 ? ALA A 46 ? GLY B 41 ALA B 46 B 2 VAL A 28 ? PHE A 33 ? VAL B 28 PHE B 33 B 3 VAL A 72 ? PRO A 75 ? VAL B 72 PRO B 75 C 1 SER A 244 ? SER A 255 ? SER B 244 SER B 255 C 2 ILE A 330 ? PHE A 340 ? ILE B 330 PHE B 340 C 3 PRO A 281 ? THR A 290 ? PRO B 281 THR B 290 C 4 ILE A 295 ? THR A 301 ? ILE B 295 THR B 301 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 100 ? N GLU B 100 O TYR A 108 ? O TYR B 108 A 2 3 O ALA A 107 ? O ALA B 107 N VAL A 6 ? N VAL B 6 A 3 4 N VAL A 3 ? N VAL B 3 O SER A 145 ? O SER B 145 A 4 5 N ILE A 144 ? N ILE B 144 O LYS A 164 ? O LYS B 164 B 1 2 O ALA A 44 ? O ALA B 44 N VAL A 30 ? N VAL B 30 C 1 2 N ILE A 245 ? N ILE B 245 O PHE A 337 ? O PHE B 337 C 2 3 O ARG A 331 ? O ARG B 331 N VAL A 289 ? N VAL B 289 C 3 4 N ALA A 288 ? N ALA B 288 O VAL A 296 ? O VAL B 296 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B CA 4001 ? 4 'BINDING SITE FOR RESIDUE CA B 4001' AC2 Software B CA 4002 ? 6 'BINDING SITE FOR RESIDUE CA B 4002' AC3 Software B CA 4003 ? 7 'BINDING SITE FOR RESIDUE CA B 4003' AC4 Software B ATP 2001 ? 21 'BINDING SITE FOR RESIDUE ATP B 2001' AC5 Software T CPT 1005 ? 3 'BINDING SITE FOR RESIDUE CPT T 1005' AC6 Software T CA 4004 ? 3 'BINDING SITE FOR RESIDUE CA T 4004' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 ASP A 7 ? ASP B 7 . ? 1_555 ? 2 AC1 4 PHE A 8 ? PHE B 8 . ? 1_555 ? 3 AC1 4 ASP A 105 ? ASP B 105 . ? 1_555 ? 4 AC1 4 ATP G . ? ATP B 2001 . ? 1_555 ? 5 AC2 6 ALA A 181 ? ALA B 181 . ? 1_555 ? 6 AC2 6 ILE A 186 ? ILE B 186 . ? 1_555 ? 7 AC2 6 HOH J . ? HOH B 405 . ? 1_555 ? 8 AC2 6 HOH K . ? HOH P 14 . ? 1_555 ? 9 AC2 6 HOH K . ? HOH P 15 . ? 1_555 ? 10 AC2 6 HOH K . ? HOH P 100 . ? 1_555 ? 11 AC3 7 ASP A 7 ? ASP B 7 . ? 1_555 ? 12 AC3 7 GLU A 106 ? GLU B 106 . ? 1_555 ? 13 AC3 7 LYS A 152 ? LYS B 152 . ? 1_555 ? 14 AC3 7 HOH J . ? HOH B 353 . ? 1_555 ? 15 AC3 7 HOH J . ? HOH B 371 . ? 1_555 ? 16 AC3 7 HOH J . ? HOH B 372 . ? 1_555 ? 17 AC3 7 DC B 13 ? DC P 13 . ? 1_555 ? 18 AC4 21 ASP A 7 ? ASP B 7 . ? 1_555 ? 19 AC4 21 PHE A 8 ? PHE B 8 . ? 1_555 ? 20 AC4 21 TYR A 10 ? TYR B 10 . ? 1_555 ? 21 AC4 21 PHE A 11 ? PHE B 11 . ? 1_555 ? 22 AC4 21 TYR A 12 ? TYR B 12 . ? 1_555 ? 23 AC4 21 ALA A 44 ? ALA B 44 . ? 1_555 ? 24 AC4 21 THR A 45 ? THR B 45 . ? 1_555 ? 25 AC4 21 TYR A 48 ? TYR B 48 . ? 1_555 ? 26 AC4 21 ARG A 51 ? ARG B 51 . ? 1_555 ? 27 AC4 21 ASP A 105 ? ASP B 105 . ? 1_555 ? 28 AC4 21 LYS A 159 ? LYS B 159 . ? 1_555 ? 29 AC4 21 HOH J . ? HOH B 353 . ? 1_555 ? 30 AC4 21 HOH J . ? HOH B 372 . ? 1_555 ? 31 AC4 21 HOH J . ? HOH B 375 . ? 1_555 ? 32 AC4 21 HOH J . ? HOH B 399 . ? 1_555 ? 33 AC4 21 HOH J . ? HOH B 439 . ? 1_555 ? 34 AC4 21 HOH J . ? HOH B 518 . ? 1_555 ? 35 AC4 21 CA D . ? CA B 4001 . ? 1_555 ? 36 AC4 21 DC B 13 ? DC P 13 . ? 1_555 ? 37 AC4 21 DT C 3 ? DT T 3 . ? 1_555 ? 38 AC4 21 DG C 4 ? DG T 4 . ? 1_555 ? 39 AC5 3 DG C 4 ? DG T 4 . ? 1_555 ? 40 AC5 3 DG C 5 ? DG T 5 . ? 1_555 ? 41 AC5 3 HOH L . ? HOH T 19 . ? 1_555 ? 42 AC6 3 DC C 18 ? DC T 18 . ? 1_555 ? 43 AC6 3 HOH L . ? HOH T 20 . ? 1_555 ? 44 AC6 3 HOH L . ? HOH T 221 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 P T DG 4 ? ? "O5'" T DG 4 ? ? 1.518 1.593 -0.075 0.010 N 2 1 "C2'" T DG 4 ? ? "C1'" T DG 4 ? ? 1.622 1.519 0.103 0.010 N 3 1 "O4'" T DG 4 ? ? "C1'" T DG 4 ? ? 1.259 1.418 -0.159 0.012 N 4 1 C5 T DG 4 ? ? N7 T DG 4 ? ? 1.459 1.388 0.071 0.006 N 5 1 "C4'" T DG 5 ? ? "C3'" T DG 5 ? ? 1.399 1.521 -0.122 0.010 N 6 1 "C3'" T DG 5 ? ? "C2'" T DG 5 ? ? 1.444 1.516 -0.072 0.008 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O5'" T DG 4 ? ? P T DG 4 ? ? OP1 T DG 4 ? ? 96.81 105.70 -8.89 0.90 N 2 1 "O4'" T DG 4 ? ? "C4'" T DG 4 ? ? "C3'" T DG 4 ? ? 113.33 106.00 7.33 0.60 N 3 1 "C4'" T DG 4 ? ? "C3'" T DG 4 ? ? "C2'" T DG 4 ? ? 95.77 102.20 -6.43 0.70 N 4 1 "O4'" T DG 4 ? ? "C1'" T DG 4 ? ? N9 T DG 4 ? ? 117.96 108.30 9.66 0.30 N 5 1 C5 T DG 4 ? ? N7 T DG 4 ? ? C8 T DG 4 ? ? 99.47 104.30 -4.83 0.50 N 6 1 "O4'" T DG 5 ? ? "C1'" T DG 5 ? ? N9 T DG 5 ? ? 112.09 108.30 3.79 0.30 N 7 1 C2 T DG 5 ? ? N3 T DG 5 ? ? C4 T DG 5 ? ? 115.81 111.90 3.91 0.50 N 8 1 "C3'" T DG 5 ? ? "O3'" T DG 5 ? ? P T DC 6 ? ? 135.43 119.70 15.73 1.20 Y 9 1 "O3'" T DG 5 ? ? P T DC 6 ? ? OP1 T DC 6 ? ? 90.01 105.20 -15.19 2.20 Y 10 1 "O5'" T DC 6 ? ? P T DC 6 ? ? OP1 T DC 6 ? ? 121.95 110.70 11.25 1.20 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR B 10 ? ? 23.03 49.54 2 1 SER B 96 ? ? -176.82 138.17 3 1 ASP B 277 ? ? 39.44 77.10 4 1 LYS B 278 ? ? 86.12 -23.72 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B GLU 342 ? A GLU 342 2 1 Y 1 B ALA 343 ? A ALA 343 3 1 Y 1 B ILE 344 ? A ILE 344 4 1 Y 1 B GLY 345 ? A GLY 345 5 1 Y 1 B LEU 346 ? A LEU 346 6 1 Y 1 B ASP 347 ? A ASP 347 7 1 Y 1 B LYS 348 ? A LYS 348 8 1 Y 1 B PHE 349 ? A PHE 349 9 1 Y 1 B PHE 350 ? A PHE 350 10 1 Y 1 B ASP 351 ? A ASP 351 11 1 Y 1 B THR 352 ? A THR 352 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 ATP PG P N N 74 ATP O1G O N N 75 ATP O2G O N N 76 ATP O3G O N N 77 ATP PB P N R 78 ATP O1B O N N 79 ATP O2B O N N 80 ATP O3B O N N 81 ATP PA P N R 82 ATP O1A O N N 83 ATP O2A O N N 84 ATP O3A O N N 85 ATP "O5'" O N N 86 ATP "C5'" C N N 87 ATP "C4'" C N R 88 ATP "O4'" O N N 89 ATP "C3'" C N S 90 ATP "O3'" O N N 91 ATP "C2'" C N R 92 ATP "O2'" O N N 93 ATP "C1'" C N R 94 ATP N9 N Y N 95 ATP C8 C Y N 96 ATP N7 N Y N 97 ATP C5 C Y N 98 ATP C6 C Y N 99 ATP N6 N N N 100 ATP N1 N Y N 101 ATP C2 C Y N 102 ATP N3 N Y N 103 ATP C4 C Y N 104 ATP HOG2 H N N 105 ATP HOG3 H N N 106 ATP HOB2 H N N 107 ATP HOA2 H N N 108 ATP "H5'1" H N N 109 ATP "H5'2" H N N 110 ATP "H4'" H N N 111 ATP "H3'" H N N 112 ATP "HO3'" H N N 113 ATP "H2'" H N N 114 ATP "HO2'" H N N 115 ATP "H1'" H N N 116 ATP H8 H N N 117 ATP HN61 H N N 118 ATP HN62 H N N 119 ATP H2 H N N 120 CA CA CA N N 121 CPT PT1 PT N N 122 CPT N1 N N N 123 CPT N2 N N N 124 CPT H11 H N N 125 CPT H12 H N N 126 CPT H21 H N N 127 CPT H22 H N N 128 CPT CL2 CL N N 129 CPT CL1 CL N N 130 CPT H13 H N N 131 CPT H23 H N N 132 CYS N N N N 133 CYS CA C N R 134 CYS C C N N 135 CYS O O N N 136 CYS CB C N N 137 CYS SG S N N 138 CYS OXT O N N 139 CYS H H N N 140 CYS H2 H N N 141 CYS HA H N N 142 CYS HB2 H N N 143 CYS HB3 H N N 144 CYS HG H N N 145 CYS HXT H N N 146 DA OP3 O N N 147 DA P P N N 148 DA OP1 O N N 149 DA OP2 O N N 150 DA "O5'" O N N 151 DA "C5'" C N N 152 DA "C4'" C N R 153 DA "O4'" O N N 154 DA "C3'" C N S 155 DA "O3'" O N N 156 DA "C2'" C N N 157 DA "C1'" C N R 158 DA N9 N Y N 159 DA C8 C Y N 160 DA N7 N Y N 161 DA C5 C Y N 162 DA C6 C Y N 163 DA N6 N N N 164 DA N1 N Y N 165 DA C2 C Y N 166 DA N3 N Y N 167 DA C4 C Y N 168 DA HOP3 H N N 169 DA HOP2 H N N 170 DA "H5'" H N N 171 DA "H5''" H N N 172 DA "H4'" H N N 173 DA "H3'" H N N 174 DA "HO3'" H N N 175 DA "H2'" H N N 176 DA "H2''" H N N 177 DA "H1'" H N N 178 DA H8 H N N 179 DA H61 H N N 180 DA H62 H N N 181 DA H2 H N N 182 DC OP3 O N N 183 DC P P N N 184 DC OP1 O N N 185 DC OP2 O N N 186 DC "O5'" O N N 187 DC "C5'" C N N 188 DC "C4'" C N R 189 DC "O4'" O N N 190 DC "C3'" C N S 191 DC "O3'" O N N 192 DC "C2'" C N N 193 DC "C1'" C N R 194 DC N1 N N N 195 DC C2 C N N 196 DC O2 O N N 197 DC N3 N N N 198 DC C4 C N N 199 DC N4 N N N 200 DC C5 C N N 201 DC C6 C N N 202 DC HOP3 H N N 203 DC HOP2 H N N 204 DC "H5'" H N N 205 DC "H5''" H N N 206 DC "H4'" H N N 207 DC "H3'" H N N 208 DC "HO3'" H N N 209 DC "H2'" H N N 210 DC "H2''" H N N 211 DC "H1'" H N N 212 DC H41 H N N 213 DC H42 H N N 214 DC H5 H N N 215 DC H6 H N N 216 DG OP3 O N N 217 DG P P N N 218 DG OP1 O N N 219 DG OP2 O N N 220 DG "O5'" O N N 221 DG "C5'" C N N 222 DG "C4'" C N R 223 DG "O4'" O N N 224 DG "C3'" C N S 225 DG "O3'" O N N 226 DG "C2'" C N N 227 DG "C1'" C N R 228 DG N9 N Y N 229 DG C8 C Y N 230 DG N7 N Y N 231 DG C5 C Y N 232 DG C6 C N N 233 DG O6 O N N 234 DG N1 N N N 235 DG C2 C N N 236 DG N2 N N N 237 DG N3 N N N 238 DG C4 C Y N 239 DG HOP3 H N N 240 DG HOP2 H N N 241 DG "H5'" H N N 242 DG "H5''" H N N 243 DG "H4'" H N N 244 DG "H3'" H N N 245 DG "HO3'" H N N 246 DG "H2'" H N N 247 DG "H2''" H N N 248 DG "H1'" H N N 249 DG H8 H N N 250 DG H1 H N N 251 DG H21 H N N 252 DG H22 H N N 253 DT OP3 O N N 254 DT P P N N 255 DT OP1 O N N 256 DT OP2 O N N 257 DT "O5'" O N N 258 DT "C5'" C N N 259 DT "C4'" C N R 260 DT "O4'" O N N 261 DT "C3'" C N S 262 DT "O3'" O N N 263 DT "C2'" C N N 264 DT "C1'" C N R 265 DT N1 N N N 266 DT C2 C N N 267 DT O2 O N N 268 DT N3 N N N 269 DT C4 C N N 270 DT O4 O N N 271 DT C5 C N N 272 DT C7 C N N 273 DT C6 C N N 274 DT HOP3 H N N 275 DT HOP2 H N N 276 DT "H5'" H N N 277 DT "H5''" H N N 278 DT "H4'" H N N 279 DT "H3'" H N N 280 DT "HO3'" H N N 281 DT "H2'" H N N 282 DT "H2''" H N N 283 DT "H1'" H N N 284 DT H3 H N N 285 DT H71 H N N 286 DT H72 H N N 287 DT H73 H N N 288 DT H6 H N N 289 GLN N N N N 290 GLN CA C N S 291 GLN C C N N 292 GLN O O N N 293 GLN CB C N N 294 GLN CG C N N 295 GLN CD C N N 296 GLN OE1 O N N 297 GLN NE2 N N N 298 GLN OXT O N N 299 GLN H H N N 300 GLN H2 H N N 301 GLN HA H N N 302 GLN HB2 H N N 303 GLN HB3 H N N 304 GLN HG2 H N N 305 GLN HG3 H N N 306 GLN HE21 H N N 307 GLN HE22 H N N 308 GLN HXT H N N 309 GLU N N N N 310 GLU CA C N S 311 GLU C C N N 312 GLU O O N N 313 GLU CB C N N 314 GLU CG C N N 315 GLU CD C N N 316 GLU OE1 O N N 317 GLU OE2 O N N 318 GLU OXT O N N 319 GLU H H N N 320 GLU H2 H N N 321 GLU HA H N N 322 GLU HB2 H N N 323 GLU HB3 H N N 324 GLU HG2 H N N 325 GLU HG3 H N N 326 GLU HE2 H N N 327 GLU HXT H N N 328 GLY N N N N 329 GLY CA C N N 330 GLY C C N N 331 GLY O O N N 332 GLY OXT O N N 333 GLY H H N N 334 GLY H2 H N N 335 GLY HA2 H N N 336 GLY HA3 H N N 337 GLY HXT H N N 338 HIS N N N N 339 HIS CA C N S 340 HIS C C N N 341 HIS O O N N 342 HIS CB C N N 343 HIS CG C Y N 344 HIS ND1 N Y N 345 HIS CD2 C Y N 346 HIS CE1 C Y N 347 HIS NE2 N Y N 348 HIS OXT O N N 349 HIS H H N N 350 HIS H2 H N N 351 HIS HA H N N 352 HIS HB2 H N N 353 HIS HB3 H N N 354 HIS HD1 H N N 355 HIS HD2 H N N 356 HIS HE1 H N N 357 HIS HE2 H N N 358 HIS HXT H N N 359 HOH O O N N 360 HOH H1 H N N 361 HOH H2 H N N 362 ILE N N N N 363 ILE CA C N S 364 ILE C C N N 365 ILE O O N N 366 ILE CB C N S 367 ILE CG1 C N N 368 ILE CG2 C N N 369 ILE CD1 C N N 370 ILE OXT O N N 371 ILE H H N N 372 ILE H2 H N N 373 ILE HA H N N 374 ILE HB H N N 375 ILE HG12 H N N 376 ILE HG13 H N N 377 ILE HG21 H N N 378 ILE HG22 H N N 379 ILE HG23 H N N 380 ILE HD11 H N N 381 ILE HD12 H N N 382 ILE HD13 H N N 383 ILE HXT H N N 384 LEU N N N N 385 LEU CA C N S 386 LEU C C N N 387 LEU O O N N 388 LEU CB C N N 389 LEU CG C N N 390 LEU CD1 C N N 391 LEU CD2 C N N 392 LEU OXT O N N 393 LEU H H N N 394 LEU H2 H N N 395 LEU HA H N N 396 LEU HB2 H N N 397 LEU HB3 H N N 398 LEU HG H N N 399 LEU HD11 H N N 400 LEU HD12 H N N 401 LEU HD13 H N N 402 LEU HD21 H N N 403 LEU HD22 H N N 404 LEU HD23 H N N 405 LEU HXT H N N 406 LYS N N N N 407 LYS CA C N S 408 LYS C C N N 409 LYS O O N N 410 LYS CB C N N 411 LYS CG C N N 412 LYS CD C N N 413 LYS CE C N N 414 LYS NZ N N N 415 LYS OXT O N N 416 LYS H H N N 417 LYS H2 H N N 418 LYS HA H N N 419 LYS HB2 H N N 420 LYS HB3 H N N 421 LYS HG2 H N N 422 LYS HG3 H N N 423 LYS HD2 H N N 424 LYS HD3 H N N 425 LYS HE2 H N N 426 LYS HE3 H N N 427 LYS HZ1 H N N 428 LYS HZ2 H N N 429 LYS HZ3 H N N 430 LYS HXT H N N 431 MET N N N N 432 MET CA C N S 433 MET C C N N 434 MET O O N N 435 MET CB C N N 436 MET CG C N N 437 MET SD S N N 438 MET CE C N N 439 MET OXT O N N 440 MET H H N N 441 MET H2 H N N 442 MET HA H N N 443 MET HB2 H N N 444 MET HB3 H N N 445 MET HG2 H N N 446 MET HG3 H N N 447 MET HE1 H N N 448 MET HE2 H N N 449 MET HE3 H N N 450 MET HXT H N N 451 PHE N N N N 452 PHE CA C N S 453 PHE C C N N 454 PHE O O N N 455 PHE CB C N N 456 PHE CG C Y N 457 PHE CD1 C Y N 458 PHE CD2 C Y N 459 PHE CE1 C Y N 460 PHE CE2 C Y N 461 PHE CZ C Y N 462 PHE OXT O N N 463 PHE H H N N 464 PHE H2 H N N 465 PHE HA H N N 466 PHE HB2 H N N 467 PHE HB3 H N N 468 PHE HD1 H N N 469 PHE HD2 H N N 470 PHE HE1 H N N 471 PHE HE2 H N N 472 PHE HZ H N N 473 PHE HXT H N N 474 PRO N N N N 475 PRO CA C N S 476 PRO C C N N 477 PRO O O N N 478 PRO CB C N N 479 PRO CG C N N 480 PRO CD C N N 481 PRO OXT O N N 482 PRO H H N N 483 PRO HA H N N 484 PRO HB2 H N N 485 PRO HB3 H N N 486 PRO HG2 H N N 487 PRO HG3 H N N 488 PRO HD2 H N N 489 PRO HD3 H N N 490 PRO HXT H N N 491 SER N N N N 492 SER CA C N S 493 SER C C N N 494 SER O O N N 495 SER CB C N N 496 SER OG O N N 497 SER OXT O N N 498 SER H H N N 499 SER H2 H N N 500 SER HA H N N 501 SER HB2 H N N 502 SER HB3 H N N 503 SER HG H N N 504 SER HXT H N N 505 THR N N N N 506 THR CA C N S 507 THR C C N N 508 THR O O N N 509 THR CB C N R 510 THR OG1 O N N 511 THR CG2 C N N 512 THR OXT O N N 513 THR H H N N 514 THR H2 H N N 515 THR HA H N N 516 THR HB H N N 517 THR HG1 H N N 518 THR HG21 H N N 519 THR HG22 H N N 520 THR HG23 H N N 521 THR HXT H N N 522 TYR N N N N 523 TYR CA C N S 524 TYR C C N N 525 TYR O O N N 526 TYR CB C N N 527 TYR CG C Y N 528 TYR CD1 C Y N 529 TYR CD2 C Y N 530 TYR CE1 C Y N 531 TYR CE2 C Y N 532 TYR CZ C Y N 533 TYR OH O N N 534 TYR OXT O N N 535 TYR H H N N 536 TYR H2 H N N 537 TYR HA H N N 538 TYR HB2 H N N 539 TYR HB3 H N N 540 TYR HD1 H N N 541 TYR HD2 H N N 542 TYR HE1 H N N 543 TYR HE2 H N N 544 TYR HH H N N 545 TYR HXT H N N 546 VAL N N N N 547 VAL CA C N S 548 VAL C C N N 549 VAL O O N N 550 VAL CB C N N 551 VAL CG1 C N N 552 VAL CG2 C N N 553 VAL OXT O N N 554 VAL H H N N 555 VAL H2 H N N 556 VAL HA H N N 557 VAL HB H N N 558 VAL HG11 H N N 559 VAL HG12 H N N 560 VAL HG13 H N N 561 VAL HG21 H N N 562 VAL HG22 H N N 563 VAL HG23 H N N 564 VAL HXT H N N 565 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 ATP PG O1G doub N N 70 ATP PG O2G sing N N 71 ATP PG O3G sing N N 72 ATP PG O3B sing N N 73 ATP O2G HOG2 sing N N 74 ATP O3G HOG3 sing N N 75 ATP PB O1B doub N N 76 ATP PB O2B sing N N 77 ATP PB O3B sing N N 78 ATP PB O3A sing N N 79 ATP O2B HOB2 sing N N 80 ATP PA O1A doub N N 81 ATP PA O2A sing N N 82 ATP PA O3A sing N N 83 ATP PA "O5'" sing N N 84 ATP O2A HOA2 sing N N 85 ATP "O5'" "C5'" sing N N 86 ATP "C5'" "C4'" sing N N 87 ATP "C5'" "H5'1" sing N N 88 ATP "C5'" "H5'2" sing N N 89 ATP "C4'" "O4'" sing N N 90 ATP "C4'" "C3'" sing N N 91 ATP "C4'" "H4'" sing N N 92 ATP "O4'" "C1'" sing N N 93 ATP "C3'" "O3'" sing N N 94 ATP "C3'" "C2'" sing N N 95 ATP "C3'" "H3'" sing N N 96 ATP "O3'" "HO3'" sing N N 97 ATP "C2'" "O2'" sing N N 98 ATP "C2'" "C1'" sing N N 99 ATP "C2'" "H2'" sing N N 100 ATP "O2'" "HO2'" sing N N 101 ATP "C1'" N9 sing N N 102 ATP "C1'" "H1'" sing N N 103 ATP N9 C8 sing Y N 104 ATP N9 C4 sing Y N 105 ATP C8 N7 doub Y N 106 ATP C8 H8 sing N N 107 ATP N7 C5 sing Y N 108 ATP C5 C6 sing Y N 109 ATP C5 C4 doub Y N 110 ATP C6 N6 sing N N 111 ATP C6 N1 doub Y N 112 ATP N6 HN61 sing N N 113 ATP N6 HN62 sing N N 114 ATP N1 C2 sing Y N 115 ATP C2 N3 doub Y N 116 ATP C2 H2 sing N N 117 ATP N3 C4 sing Y N 118 CPT PT1 N1 sing N N 119 CPT PT1 N2 sing N N 120 CPT N1 H11 sing N N 121 CPT N1 H12 sing N N 122 CPT N1 H13 sing N N 123 CPT N2 H21 sing N N 124 CPT N2 H22 sing N N 125 CPT N2 H23 sing N N 126 CPT CL2 PT1 sing N N 127 CPT CL1 PT1 sing N N 128 CYS N CA sing N N 129 CYS N H sing N N 130 CYS N H2 sing N N 131 CYS CA C sing N N 132 CYS CA CB sing N N 133 CYS CA HA sing N N 134 CYS C O doub N N 135 CYS C OXT sing N N 136 CYS CB SG sing N N 137 CYS CB HB2 sing N N 138 CYS CB HB3 sing N N 139 CYS SG HG sing N N 140 CYS OXT HXT sing N N 141 DA OP3 P sing N N 142 DA OP3 HOP3 sing N N 143 DA P OP1 doub N N 144 DA P OP2 sing N N 145 DA P "O5'" sing N N 146 DA OP2 HOP2 sing N N 147 DA "O5'" "C5'" sing N N 148 DA "C5'" "C4'" sing N N 149 DA "C5'" "H5'" sing N N 150 DA "C5'" "H5''" sing N N 151 DA "C4'" "O4'" sing N N 152 DA "C4'" "C3'" sing N N 153 DA "C4'" "H4'" sing N N 154 DA "O4'" "C1'" sing N N 155 DA "C3'" "O3'" sing N N 156 DA "C3'" "C2'" sing N N 157 DA "C3'" "H3'" sing N N 158 DA "O3'" "HO3'" sing N N 159 DA "C2'" "C1'" sing N N 160 DA "C2'" "H2'" sing N N 161 DA "C2'" "H2''" sing N N 162 DA "C1'" N9 sing N N 163 DA "C1'" "H1'" sing N N 164 DA N9 C8 sing Y N 165 DA N9 C4 sing Y N 166 DA C8 N7 doub Y N 167 DA C8 H8 sing N N 168 DA N7 C5 sing Y N 169 DA C5 C6 sing Y N 170 DA C5 C4 doub Y N 171 DA C6 N6 sing N N 172 DA C6 N1 doub Y N 173 DA N6 H61 sing N N 174 DA N6 H62 sing N N 175 DA N1 C2 sing Y N 176 DA C2 N3 doub Y N 177 DA C2 H2 sing N N 178 DA N3 C4 sing Y N 179 DC OP3 P sing N N 180 DC OP3 HOP3 sing N N 181 DC P OP1 doub N N 182 DC P OP2 sing N N 183 DC P "O5'" sing N N 184 DC OP2 HOP2 sing N N 185 DC "O5'" "C5'" sing N N 186 DC "C5'" "C4'" sing N N 187 DC "C5'" "H5'" sing N N 188 DC "C5'" "H5''" sing N N 189 DC "C4'" "O4'" sing N N 190 DC "C4'" "C3'" sing N N 191 DC "C4'" "H4'" sing N N 192 DC "O4'" "C1'" sing N N 193 DC "C3'" "O3'" sing N N 194 DC "C3'" "C2'" sing N N 195 DC "C3'" "H3'" sing N N 196 DC "O3'" "HO3'" sing N N 197 DC "C2'" "C1'" sing N N 198 DC "C2'" "H2'" sing N N 199 DC "C2'" "H2''" sing N N 200 DC "C1'" N1 sing N N 201 DC "C1'" "H1'" sing N N 202 DC N1 C2 sing N N 203 DC N1 C6 sing N N 204 DC C2 O2 doub N N 205 DC C2 N3 sing N N 206 DC N3 C4 doub N N 207 DC C4 N4 sing N N 208 DC C4 C5 sing N N 209 DC N4 H41 sing N N 210 DC N4 H42 sing N N 211 DC C5 C6 doub N N 212 DC C5 H5 sing N N 213 DC C6 H6 sing N N 214 DG OP3 P sing N N 215 DG OP3 HOP3 sing N N 216 DG P OP1 doub N N 217 DG P OP2 sing N N 218 DG P "O5'" sing N N 219 DG OP2 HOP2 sing N N 220 DG "O5'" "C5'" sing N N 221 DG "C5'" "C4'" sing N N 222 DG "C5'" "H5'" sing N N 223 DG "C5'" "H5''" sing N N 224 DG "C4'" "O4'" sing N N 225 DG "C4'" "C3'" sing N N 226 DG "C4'" "H4'" sing N N 227 DG "O4'" "C1'" sing N N 228 DG "C3'" "O3'" sing N N 229 DG "C3'" "C2'" sing N N 230 DG "C3'" "H3'" sing N N 231 DG "O3'" "HO3'" sing N N 232 DG "C2'" "C1'" sing N N 233 DG "C2'" "H2'" sing N N 234 DG "C2'" "H2''" sing N N 235 DG "C1'" N9 sing N N 236 DG "C1'" "H1'" sing N N 237 DG N9 C8 sing Y N 238 DG N9 C4 sing Y N 239 DG C8 N7 doub Y N 240 DG C8 H8 sing N N 241 DG N7 C5 sing Y N 242 DG C5 C6 sing N N 243 DG C5 C4 doub Y N 244 DG C6 O6 doub N N 245 DG C6 N1 sing N N 246 DG N1 C2 sing N N 247 DG N1 H1 sing N N 248 DG C2 N2 sing N N 249 DG C2 N3 doub N N 250 DG N2 H21 sing N N 251 DG N2 H22 sing N N 252 DG N3 C4 sing N N 253 DT OP3 P sing N N 254 DT OP3 HOP3 sing N N 255 DT P OP1 doub N N 256 DT P OP2 sing N N 257 DT P "O5'" sing N N 258 DT OP2 HOP2 sing N N 259 DT "O5'" "C5'" sing N N 260 DT "C5'" "C4'" sing N N 261 DT "C5'" "H5'" sing N N 262 DT "C5'" "H5''" sing N N 263 DT "C4'" "O4'" sing N N 264 DT "C4'" "C3'" sing N N 265 DT "C4'" "H4'" sing N N 266 DT "O4'" "C1'" sing N N 267 DT "C3'" "O3'" sing N N 268 DT "C3'" "C2'" sing N N 269 DT "C3'" "H3'" sing N N 270 DT "O3'" "HO3'" sing N N 271 DT "C2'" "C1'" sing N N 272 DT "C2'" "H2'" sing N N 273 DT "C2'" "H2''" sing N N 274 DT "C1'" N1 sing N N 275 DT "C1'" "H1'" sing N N 276 DT N1 C2 sing N N 277 DT N1 C6 sing N N 278 DT C2 O2 doub N N 279 DT C2 N3 sing N N 280 DT N3 C4 sing N N 281 DT N3 H3 sing N N 282 DT C4 O4 doub N N 283 DT C4 C5 sing N N 284 DT C5 C7 sing N N 285 DT C5 C6 doub N N 286 DT C7 H71 sing N N 287 DT C7 H72 sing N N 288 DT C7 H73 sing N N 289 DT C6 H6 sing N N 290 GLN N CA sing N N 291 GLN N H sing N N 292 GLN N H2 sing N N 293 GLN CA C sing N N 294 GLN CA CB sing N N 295 GLN CA HA sing N N 296 GLN C O doub N N 297 GLN C OXT sing N N 298 GLN CB CG sing N N 299 GLN CB HB2 sing N N 300 GLN CB HB3 sing N N 301 GLN CG CD sing N N 302 GLN CG HG2 sing N N 303 GLN CG HG3 sing N N 304 GLN CD OE1 doub N N 305 GLN CD NE2 sing N N 306 GLN NE2 HE21 sing N N 307 GLN NE2 HE22 sing N N 308 GLN OXT HXT sing N N 309 GLU N CA sing N N 310 GLU N H sing N N 311 GLU N H2 sing N N 312 GLU CA C sing N N 313 GLU CA CB sing N N 314 GLU CA HA sing N N 315 GLU C O doub N N 316 GLU C OXT sing N N 317 GLU CB CG sing N N 318 GLU CB HB2 sing N N 319 GLU CB HB3 sing N N 320 GLU CG CD sing N N 321 GLU CG HG2 sing N N 322 GLU CG HG3 sing N N 323 GLU CD OE1 doub N N 324 GLU CD OE2 sing N N 325 GLU OE2 HE2 sing N N 326 GLU OXT HXT sing N N 327 GLY N CA sing N N 328 GLY N H sing N N 329 GLY N H2 sing N N 330 GLY CA C sing N N 331 GLY CA HA2 sing N N 332 GLY CA HA3 sing N N 333 GLY C O doub N N 334 GLY C OXT sing N N 335 GLY OXT HXT sing N N 336 HIS N CA sing N N 337 HIS N H sing N N 338 HIS N H2 sing N N 339 HIS CA C sing N N 340 HIS CA CB sing N N 341 HIS CA HA sing N N 342 HIS C O doub N N 343 HIS C OXT sing N N 344 HIS CB CG sing N N 345 HIS CB HB2 sing N N 346 HIS CB HB3 sing N N 347 HIS CG ND1 sing Y N 348 HIS CG CD2 doub Y N 349 HIS ND1 CE1 doub Y N 350 HIS ND1 HD1 sing N N 351 HIS CD2 NE2 sing Y N 352 HIS CD2 HD2 sing N N 353 HIS CE1 NE2 sing Y N 354 HIS CE1 HE1 sing N N 355 HIS NE2 HE2 sing N N 356 HIS OXT HXT sing N N 357 HOH O H1 sing N N 358 HOH O H2 sing N N 359 ILE N CA sing N N 360 ILE N H sing N N 361 ILE N H2 sing N N 362 ILE CA C sing N N 363 ILE CA CB sing N N 364 ILE CA HA sing N N 365 ILE C O doub N N 366 ILE C OXT sing N N 367 ILE CB CG1 sing N N 368 ILE CB CG2 sing N N 369 ILE CB HB sing N N 370 ILE CG1 CD1 sing N N 371 ILE CG1 HG12 sing N N 372 ILE CG1 HG13 sing N N 373 ILE CG2 HG21 sing N N 374 ILE CG2 HG22 sing N N 375 ILE CG2 HG23 sing N N 376 ILE CD1 HD11 sing N N 377 ILE CD1 HD12 sing N N 378 ILE CD1 HD13 sing N N 379 ILE OXT HXT sing N N 380 LEU N CA sing N N 381 LEU N H sing N N 382 LEU N H2 sing N N 383 LEU CA C sing N N 384 LEU CA CB sing N N 385 LEU CA HA sing N N 386 LEU C O doub N N 387 LEU C OXT sing N N 388 LEU CB CG sing N N 389 LEU CB HB2 sing N N 390 LEU CB HB3 sing N N 391 LEU CG CD1 sing N N 392 LEU CG CD2 sing N N 393 LEU CG HG sing N N 394 LEU CD1 HD11 sing N N 395 LEU CD1 HD12 sing N N 396 LEU CD1 HD13 sing N N 397 LEU CD2 HD21 sing N N 398 LEU CD2 HD22 sing N N 399 LEU CD2 HD23 sing N N 400 LEU OXT HXT sing N N 401 LYS N CA sing N N 402 LYS N H sing N N 403 LYS N H2 sing N N 404 LYS CA C sing N N 405 LYS CA CB sing N N 406 LYS CA HA sing N N 407 LYS C O doub N N 408 LYS C OXT sing N N 409 LYS CB CG sing N N 410 LYS CB HB2 sing N N 411 LYS CB HB3 sing N N 412 LYS CG CD sing N N 413 LYS CG HG2 sing N N 414 LYS CG HG3 sing N N 415 LYS CD CE sing N N 416 LYS CD HD2 sing N N 417 LYS CD HD3 sing N N 418 LYS CE NZ sing N N 419 LYS CE HE2 sing N N 420 LYS CE HE3 sing N N 421 LYS NZ HZ1 sing N N 422 LYS NZ HZ2 sing N N 423 LYS NZ HZ3 sing N N 424 LYS OXT HXT sing N N 425 MET N CA sing N N 426 MET N H sing N N 427 MET N H2 sing N N 428 MET CA C sing N N 429 MET CA CB sing N N 430 MET CA HA sing N N 431 MET C O doub N N 432 MET C OXT sing N N 433 MET CB CG sing N N 434 MET CB HB2 sing N N 435 MET CB HB3 sing N N 436 MET CG SD sing N N 437 MET CG HG2 sing N N 438 MET CG HG3 sing N N 439 MET SD CE sing N N 440 MET CE HE1 sing N N 441 MET CE HE2 sing N N 442 MET CE HE3 sing N N 443 MET OXT HXT sing N N 444 PHE N CA sing N N 445 PHE N H sing N N 446 PHE N H2 sing N N 447 PHE CA C sing N N 448 PHE CA CB sing N N 449 PHE CA HA sing N N 450 PHE C O doub N N 451 PHE C OXT sing N N 452 PHE CB CG sing N N 453 PHE CB HB2 sing N N 454 PHE CB HB3 sing N N 455 PHE CG CD1 doub Y N 456 PHE CG CD2 sing Y N 457 PHE CD1 CE1 sing Y N 458 PHE CD1 HD1 sing N N 459 PHE CD2 CE2 doub Y N 460 PHE CD2 HD2 sing N N 461 PHE CE1 CZ doub Y N 462 PHE CE1 HE1 sing N N 463 PHE CE2 CZ sing Y N 464 PHE CE2 HE2 sing N N 465 PHE CZ HZ sing N N 466 PHE OXT HXT sing N N 467 PRO N CA sing N N 468 PRO N CD sing N N 469 PRO N H sing N N 470 PRO CA C sing N N 471 PRO CA CB sing N N 472 PRO CA HA sing N N 473 PRO C O doub N N 474 PRO C OXT sing N N 475 PRO CB CG sing N N 476 PRO CB HB2 sing N N 477 PRO CB HB3 sing N N 478 PRO CG CD sing N N 479 PRO CG HG2 sing N N 480 PRO CG HG3 sing N N 481 PRO CD HD2 sing N N 482 PRO CD HD3 sing N N 483 PRO OXT HXT sing N N 484 SER N CA sing N N 485 SER N H sing N N 486 SER N H2 sing N N 487 SER CA C sing N N 488 SER CA CB sing N N 489 SER CA HA sing N N 490 SER C O doub N N 491 SER C OXT sing N N 492 SER CB OG sing N N 493 SER CB HB2 sing N N 494 SER CB HB3 sing N N 495 SER OG HG sing N N 496 SER OXT HXT sing N N 497 THR N CA sing N N 498 THR N H sing N N 499 THR N H2 sing N N 500 THR CA C sing N N 501 THR CA CB sing N N 502 THR CA HA sing N N 503 THR C O doub N N 504 THR C OXT sing N N 505 THR CB OG1 sing N N 506 THR CB CG2 sing N N 507 THR CB HB sing N N 508 THR OG1 HG1 sing N N 509 THR CG2 HG21 sing N N 510 THR CG2 HG22 sing N N 511 THR CG2 HG23 sing N N 512 THR OXT HXT sing N N 513 TYR N CA sing N N 514 TYR N H sing N N 515 TYR N H2 sing N N 516 TYR CA C sing N N 517 TYR CA CB sing N N 518 TYR CA HA sing N N 519 TYR C O doub N N 520 TYR C OXT sing N N 521 TYR CB CG sing N N 522 TYR CB HB2 sing N N 523 TYR CB HB3 sing N N 524 TYR CG CD1 doub Y N 525 TYR CG CD2 sing Y N 526 TYR CD1 CE1 sing Y N 527 TYR CD1 HD1 sing N N 528 TYR CD2 CE2 doub Y N 529 TYR CD2 HD2 sing N N 530 TYR CE1 CZ doub Y N 531 TYR CE1 HE1 sing N N 532 TYR CE2 CZ sing Y N 533 TYR CE2 HE2 sing N N 534 TYR CZ OH sing N N 535 TYR OH HH sing N N 536 TYR OXT HXT sing N N 537 VAL N CA sing N N 538 VAL N H sing N N 539 VAL N H2 sing N N 540 VAL CA C sing N N 541 VAL CA CB sing N N 542 VAL CA HA sing N N 543 VAL C O doub N N 544 VAL C OXT sing N N 545 VAL CB CG1 sing N N 546 VAL CB CG2 sing N N 547 VAL CB HB sing N N 548 VAL CG1 HG11 sing N N 549 VAL CG1 HG12 sing N N 550 VAL CG1 HG13 sing N N 551 VAL CG2 HG21 sing N N 552 VAL CG2 HG22 sing N N 553 VAL CG2 HG23 sing N N 554 VAL OXT HXT sing N N 555 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3M9O 'double helix' 3M9O 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 1 1_555 C DC 16 1_555 -0.116 -0.219 -0.079 -3.785 -6.821 -4.438 1 P_DG1:DC16_T P 1 ? T 16 ? 19 1 1 B DG 2 1_555 C DC 15 1_555 -0.289 -0.309 -0.263 -3.354 -2.264 -0.246 2 P_DG2:DC15_T P 2 ? T 15 ? 19 1 1 B DG 3 1_555 C DC 14 1_555 -0.097 -0.149 -0.094 5.501 -6.267 -2.255 3 P_DG3:DC14_T P 3 ? T 14 ? 19 1 1 B DA 4 1_555 C DT 13 1_555 0.260 -0.226 -0.116 2.472 -11.362 2.918 4 P_DA4:DT13_T P 4 ? T 13 ? 20 1 1 B DA 5 1_555 C DT 12 1_555 -0.074 -0.201 -0.116 3.119 -12.632 1.775 5 P_DA5:DT12_T P 5 ? T 12 ? 20 1 1 B DG 6 1_555 C DC 11 1_555 -0.157 -0.121 0.158 7.445 -4.300 -0.017 6 P_DG6:DC11_T P 6 ? T 11 ? 19 1 1 B DG 7 1_555 C DC 10 1_555 -0.154 -0.273 0.135 10.701 -11.602 0.166 7 P_DG7:DC10_T P 7 ? T 10 ? 19 1 1 B DA 8 1_555 C DT 9 1_555 -0.057 -0.078 -0.132 -5.635 -10.918 -0.156 8 P_DA8:DT9_T P 8 ? T 9 ? 20 1 1 B DA 9 1_555 C DT 8 1_555 0.044 -0.181 -0.193 -4.528 -11.547 2.447 9 P_DA9:DT8_T P 9 ? T 8 ? 20 1 1 B DA 10 1_555 C DT 7 1_555 -0.161 -0.206 0.179 3.096 -6.969 0.403 10 P_DA10:DT7_T P 10 ? T 7 ? 20 1 1 B DG 11 1_555 C DC 6 1_555 0.092 -0.231 -0.002 0.073 -7.324 -3.153 11 P_DG11:DC6_T P 11 ? T 6 ? 19 1 1 B DC 12 1_555 C DG 5 1_555 -0.019 -0.241 -0.438 6.887 -6.324 -2.042 12 P_DC12:DG5_T P 12 ? T 5 ? 19 1 1 B DC 13 1_555 C DG 4 1_555 0.101 -0.217 -0.034 -14.941 -22.222 1.803 13 P_DC13:DG4_T P 13 ? T 4 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 1 1_555 C DC 16 1_555 B DG 2 1_555 C DC 15 1_555 1.017 0.166 3.383 4.205 2.586 32.837 -0.167 -1.036 3.486 4.542 -7.386 33.196 1 PP_DG1DG2:DC15DC16_TT P 1 ? T 16 ? P 2 ? T 15 ? 1 B DG 2 1_555 C DC 15 1_555 B DG 3 1_555 C DC 14 1_555 -1.454 0.571 3.160 -6.348 6.888 35.430 -0.059 1.423 3.410 11.081 10.212 36.609 2 PP_DG2DG3:DC14DC15_TT P 2 ? T 15 ? P 3 ? T 14 ? 1 B DG 3 1_555 C DC 14 1_555 B DA 4 1_555 C DT 13 1_555 0.178 -0.067 3.309 0.352 5.380 37.312 -0.808 -0.230 3.270 8.356 -0.547 37.686 3 PP_DG3DA4:DT13DC14_TT P 3 ? T 14 ? P 4 ? T 13 ? 1 B DA 4 1_555 C DT 13 1_555 B DA 5 1_555 C DT 12 1_555 0.042 0.087 3.309 -0.980 10.124 30.186 -1.726 -0.259 3.169 18.782 1.818 31.815 4 PP_DA4DA5:DT12DT13_TT P 4 ? T 13 ? P 5 ? T 12 ? 1 B DA 5 1_555 C DT 12 1_555 B DG 6 1_555 C DC 11 1_555 -0.689 0.065 3.156 -3.675 8.100 34.081 -1.075 0.603 3.144 13.536 6.142 35.189 5 PP_DA5DG6:DC11DT12_TT P 5 ? T 12 ? P 6 ? T 11 ? 1 B DG 6 1_555 C DC 11 1_555 B DG 7 1_555 C DC 10 1_555 0.289 -0.136 3.226 0.262 7.635 31.157 -1.597 -0.477 3.108 13.952 -0.479 32.057 6 PP_DG6DG7:DC10DC11_TT P 6 ? T 11 ? P 7 ? T 10 ? 1 B DG 7 1_555 C DC 10 1_555 B DA 8 1_555 C DT 9 1_555 -0.064 -0.256 3.671 1.037 0.619 42.079 -0.428 0.209 3.665 0.862 -1.444 42.096 7 PP_DG7DA8:DT9DC10_TT P 7 ? T 10 ? P 8 ? T 9 ? 1 B DA 8 1_555 C DT 9 1_555 B DA 9 1_555 C DT 8 1_555 -0.076 -0.282 3.318 1.538 -1.787 37.004 -0.201 0.328 3.321 -2.812 -2.421 37.076 8 PP_DA8DA9:DT8DT9_TT P 8 ? T 9 ? P 9 ? T 8 ? 1 B DA 9 1_555 C DT 8 1_555 B DA 10 1_555 C DT 7 1_555 0.289 -0.475 3.061 -3.110 2.016 29.713 -1.305 -1.156 2.977 3.912 6.036 29.938 9 PP_DA9DA10:DT7DT8_TT P 9 ? T 8 ? P 10 ? T 7 ? 1 B DA 10 1_555 C DT 7 1_555 B DG 11 1_555 C DC 6 1_555 0.145 -0.864 3.482 -0.689 1.920 35.126 -1.732 -0.349 3.428 3.178 1.141 35.183 10 PP_DA10DG11:DC6DT7_TT P 10 ? T 7 ? P 11 ? T 6 ? 1 B DG 11 1_555 C DC 6 1_555 B DC 12 1_555 C DG 5 1_555 0.536 -0.554 3.125 5.614 5.215 30.898 -1.924 0.005 3.042 9.605 -10.340 31.811 11 PP_DG11DC12:DG5DC6_TT P 11 ? T 6 ? P 12 ? T 5 ? 1 B DC 12 1_555 C DG 5 1_555 B DC 13 1_555 C DG 4 1_555 -0.569 -1.186 3.814 -2.342 15.758 31.286 -4.566 0.559 2.935 27.129 4.031 35.018 12 PP_DC12DC13:DG4DG5_TT P 12 ? T 5 ? P 13 ? T 4 ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1JX4 _pdbx_initial_refinement_model.details 'PDB ENTRY 1JX4' # _atom_sites.entry_id 3M9O _atom_sites.fract_transf_matrix[1][1] 0.010077 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009645 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019243 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O P PT S # loop_