data_3MDA # _entry.id 3MDA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3MDA pdb_00003mda 10.2210/pdb3mda/pdb NDB NA0493 ? ? RCSB RCSB058405 ? ? WWPDB D_1000058405 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-04-28 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-08 4 'Structure model' 1 3 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_ref_seq_dif 8 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 22 4 'Structure model' '_pdbx_struct_conn_angle.value' 23 4 'Structure model' '_struct_conn.pdbx_dist_value' 24 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 25 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 26 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 27 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 28 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 29 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 30 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 31 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 32 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 33 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 34 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 35 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 36 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 37 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 38 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 39 4 'Structure model' '_struct_ref_seq_dif.details' 40 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 41 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 42 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 3MDA _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-03-30 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3MDC _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Garcia-Diaz, M.' 1 'Murray, M.' 2 'Kunkel, T.' 3 'Chou, K.M.' 4 # _citation.id primary _citation.title 'Interaction between DNA Polymerase lambda and anticancer nucleoside analogs.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 285 _citation.page_first 16874 _citation.page_last 16879 _citation.year 2010 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20348107 _citation.pdbx_database_id_DOI 10.1074/jbc.M109.094391 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Garcia-Diaz, M.' 1 ? primary 'Murray, M.S.' 2 ? primary 'Kunkel, T.A.' 3 ? primary 'Chou, K.M.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA polymerase lambda' 36405.566 1 '2.7.7.7, 4.2.99.-' ? ? ? 2 polymer syn ;DNA (5'-D(*CP*GP*GP*CP*GP*GP*TP*AP*CP*TP*G)-3') ; 3390.209 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*CP*AP*GP*TP*AP*CP*(CAR))-3') ; 2098.400 1 ? ? ? ? 4 polymer syn ;DNA (5'-D(P*GP*CP*CP*G)-3') ; 1191.818 1 ? ? ? ? 5 non-polymer syn PYROPHOSPHATE 177.975 1 ? ? ? ? 6 non-polymer syn 'SODIUM ION' 22.990 2 ? ? ? ? 7 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 8 water nat water 18.015 290 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Pol Lambda, DNA polymerase kappa, DNA polymerase beta-2, Pol beta2' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;AHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISE SVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGL LCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLD IIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYREP AERDW ; ;AHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISE SVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGL LCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLD IIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYREP AERDW ; A ? 2 polydeoxyribonucleotide no no '(DC)(DG)(DG)(DC)(DG)(DG)(DT)(DA)(DC)(DT)(DG)' CGGCGGTACTG T ? 3 polydeoxyribonucleotide no yes '(DC)(DA)(DG)(DT)(DA)(DC)(CAR)' CAGTACC P ? 4 polydeoxyribonucleotide no no '(DG)(DC)(DC)(DG)' GCCG D ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 PYROPHOSPHATE PPV 6 'SODIUM ION' NA 7 'MAGNESIUM ION' MG 8 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 HIS n 1 3 ASN n 1 4 LEU n 1 5 HIS n 1 6 ILE n 1 7 THR n 1 8 GLU n 1 9 LYS n 1 10 LEU n 1 11 GLU n 1 12 VAL n 1 13 LEU n 1 14 ALA n 1 15 LYS n 1 16 ALA n 1 17 TYR n 1 18 SER n 1 19 VAL n 1 20 GLN n 1 21 GLY n 1 22 ASP n 1 23 LYS n 1 24 TRP n 1 25 ARG n 1 26 ALA n 1 27 LEU n 1 28 GLY n 1 29 TYR n 1 30 ALA n 1 31 LYS n 1 32 ALA n 1 33 ILE n 1 34 ASN n 1 35 ALA n 1 36 LEU n 1 37 LYS n 1 38 SER n 1 39 PHE n 1 40 HIS n 1 41 LYS n 1 42 PRO n 1 43 VAL n 1 44 THR n 1 45 SER n 1 46 TYR n 1 47 GLN n 1 48 GLU n 1 49 ALA n 1 50 CYS n 1 51 SER n 1 52 ILE n 1 53 PRO n 1 54 GLY n 1 55 ILE n 1 56 GLY n 1 57 LYS n 1 58 ARG n 1 59 MET n 1 60 ALA n 1 61 GLU n 1 62 LYS n 1 63 ILE n 1 64 ILE n 1 65 GLU n 1 66 ILE n 1 67 LEU n 1 68 GLU n 1 69 SER n 1 70 GLY n 1 71 HIS n 1 72 LEU n 1 73 ARG n 1 74 LYS n 1 75 LEU n 1 76 ASP n 1 77 HIS n 1 78 ILE n 1 79 SER n 1 80 GLU n 1 81 SER n 1 82 VAL n 1 83 PRO n 1 84 VAL n 1 85 LEU n 1 86 GLU n 1 87 LEU n 1 88 PHE n 1 89 SER n 1 90 ASN n 1 91 ILE n 1 92 TRP n 1 93 GLY n 1 94 ALA n 1 95 GLY n 1 96 THR n 1 97 LYS n 1 98 THR n 1 99 ALA n 1 100 GLN n 1 101 MET n 1 102 TRP n 1 103 TYR n 1 104 GLN n 1 105 GLN n 1 106 GLY n 1 107 PHE n 1 108 ARG n 1 109 SER n 1 110 LEU n 1 111 GLU n 1 112 ASP n 1 113 ILE n 1 114 ARG n 1 115 SER n 1 116 GLN n 1 117 ALA n 1 118 SER n 1 119 LEU n 1 120 THR n 1 121 THR n 1 122 GLN n 1 123 GLN n 1 124 ALA n 1 125 ILE n 1 126 GLY n 1 127 LEU n 1 128 LYS n 1 129 HIS n 1 130 TYR n 1 131 SER n 1 132 ASP n 1 133 PHE n 1 134 LEU n 1 135 GLU n 1 136 ARG n 1 137 MET n 1 138 PRO n 1 139 ARG n 1 140 GLU n 1 141 GLU n 1 142 ALA n 1 143 THR n 1 144 GLU n 1 145 ILE n 1 146 GLU n 1 147 GLN n 1 148 THR n 1 149 VAL n 1 150 GLN n 1 151 LYS n 1 152 ALA n 1 153 ALA n 1 154 GLN n 1 155 ALA n 1 156 PHE n 1 157 ASN n 1 158 SER n 1 159 GLY n 1 160 LEU n 1 161 LEU n 1 162 CYS n 1 163 VAL n 1 164 ALA n 1 165 CYS n 1 166 GLY n 1 167 SER n 1 168 TYR n 1 169 ARG n 1 170 ARG n 1 171 GLY n 1 172 LYS n 1 173 ALA n 1 174 THR n 1 175 CYS n 1 176 GLY n 1 177 ASP n 1 178 VAL n 1 179 ASP n 1 180 VAL n 1 181 LEU n 1 182 ILE n 1 183 THR n 1 184 HIS n 1 185 PRO n 1 186 ASP n 1 187 GLY n 1 188 ARG n 1 189 SER n 1 190 HIS n 1 191 ARG n 1 192 GLY n 1 193 ILE n 1 194 PHE n 1 195 SER n 1 196 ARG n 1 197 LEU n 1 198 LEU n 1 199 ASP n 1 200 SER n 1 201 LEU n 1 202 ARG n 1 203 GLN n 1 204 GLU n 1 205 GLY n 1 206 PHE n 1 207 LEU n 1 208 THR n 1 209 ASP n 1 210 ASP n 1 211 LEU n 1 212 VAL n 1 213 SER n 1 214 GLN n 1 215 GLU n 1 216 GLU n 1 217 ASN n 1 218 GLY n 1 219 GLN n 1 220 GLN n 1 221 GLN n 1 222 LYS n 1 223 TYR n 1 224 LEU n 1 225 GLY n 1 226 VAL n 1 227 CYS n 1 228 ARG n 1 229 LEU n 1 230 PRO n 1 231 GLY n 1 232 PRO n 1 233 GLY n 1 234 ARG n 1 235 ARG n 1 236 HIS n 1 237 ARG n 1 238 ARG n 1 239 LEU n 1 240 ASP n 1 241 ILE n 1 242 ILE n 1 243 VAL n 1 244 VAL n 1 245 PRO n 1 246 TYR n 1 247 SER n 1 248 GLU n 1 249 PHE n 1 250 ALA n 1 251 CYS n 1 252 ALA n 1 253 LEU n 1 254 LEU n 1 255 TYR n 1 256 PHE n 1 257 THR n 1 258 GLY n 1 259 SER n 1 260 ALA n 1 261 HIS n 1 262 PHE n 1 263 ASN n 1 264 ARG n 1 265 SER n 1 266 MET n 1 267 ARG n 1 268 ALA n 1 269 LEU n 1 270 ALA n 1 271 LYS n 1 272 THR n 1 273 LYS n 1 274 GLY n 1 275 MET n 1 276 SER n 1 277 LEU n 1 278 SER n 1 279 GLU n 1 280 HIS n 1 281 ALA n 1 282 LEU n 1 283 SER n 1 284 THR n 1 285 ALA n 1 286 VAL n 1 287 VAL n 1 288 ARG n 1 289 ASN n 1 290 THR n 1 291 HIS n 1 292 GLY n 1 293 CYS n 1 294 LYS n 1 295 VAL n 1 296 GLY n 1 297 PRO n 1 298 GLY n 1 299 ARG n 1 300 VAL n 1 301 LEU n 1 302 PRO n 1 303 THR n 1 304 PRO n 1 305 THR n 1 306 GLU n 1 307 LYS n 1 308 ASP n 1 309 VAL n 1 310 PHE n 1 311 ARG n 1 312 LEU n 1 313 LEU n 1 314 GLY n 1 315 LEU n 1 316 PRO n 1 317 TYR n 1 318 ARG n 1 319 GLU n 1 320 PRO n 1 321 ALA n 1 322 GLU n 1 323 ARG n 1 324 ASP n 1 325 TRP n 2 1 DC n 2 2 DG n 2 3 DG n 2 4 DC n 2 5 DG n 2 6 DG n 2 7 DT n 2 8 DA n 2 9 DC n 2 10 DT n 2 11 DG n 3 1 DC n 3 2 DA n 3 3 DG n 3 4 DT n 3 5 DA n 3 6 DC n 3 7 CAR n 4 1 DG n 4 2 DC n 4 3 DC n 4 4 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene POLL _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET22 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? ? ? ? 'The DNA fragment is chemically synthesized.' 3 1 sample ? ? ? ? ? 'The DNA fragment is chemically synthesized.' 4 1 sample ? ? ? ? ? 'The DNA fragment is chemically synthesized.' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CAR 'RNA linking' n ;CYTOSINE ARABINOSE-5'-PHOSPHATE ; ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PPV non-polymer . PYROPHOSPHATE ? 'H4 O7 P2' 177.975 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 251 251 ALA ALA A . n A 1 2 HIS 2 252 252 HIS HIS A . n A 1 3 ASN 3 253 253 ASN ASN A . n A 1 4 LEU 4 254 254 LEU LEU A . n A 1 5 HIS 5 255 255 HIS HIS A . n A 1 6 ILE 6 256 256 ILE ILE A . n A 1 7 THR 7 257 257 THR THR A . n A 1 8 GLU 8 258 258 GLU ALA A . n A 1 9 LYS 9 259 259 LYS LYS A . n A 1 10 LEU 10 260 260 LEU LEU A . n A 1 11 GLU 11 261 261 GLU GLU A . n A 1 12 VAL 12 262 262 VAL VAL A . n A 1 13 LEU 13 263 263 LEU LEU A . n A 1 14 ALA 14 264 264 ALA ALA A . n A 1 15 LYS 15 265 265 LYS LYS A . n A 1 16 ALA 16 266 266 ALA ALA A . n A 1 17 TYR 17 267 267 TYR TYR A . n A 1 18 SER 18 268 268 SER SER A . n A 1 19 VAL 19 269 269 VAL VAL A . n A 1 20 GLN 20 270 270 GLN GLN A . n A 1 21 GLY 21 271 271 GLY GLY A . n A 1 22 ASP 22 272 272 ASP ASP A . n A 1 23 LYS 23 273 273 LYS LYS A . n A 1 24 TRP 24 274 274 TRP TRP A . n A 1 25 ARG 25 275 275 ARG ARG A . n A 1 26 ALA 26 276 276 ALA ALA A . n A 1 27 LEU 27 277 277 LEU LEU A . n A 1 28 GLY 28 278 278 GLY GLY A . n A 1 29 TYR 29 279 279 TYR TYR A . n A 1 30 ALA 30 280 280 ALA ALA A . n A 1 31 LYS 31 281 281 LYS LYS A . n A 1 32 ALA 32 282 282 ALA ALA A . n A 1 33 ILE 33 283 283 ILE ILE A . n A 1 34 ASN 34 284 284 ASN ASN A . n A 1 35 ALA 35 285 285 ALA ALA A . n A 1 36 LEU 36 286 286 LEU LEU A . n A 1 37 LYS 37 287 287 LYS LYS A . n A 1 38 SER 38 288 288 SER SER A . n A 1 39 PHE 39 289 289 PHE PHE A . n A 1 40 HIS 40 290 290 HIS HIS A . n A 1 41 LYS 41 291 291 LYS LYS A . n A 1 42 PRO 42 292 292 PRO PRO A . n A 1 43 VAL 43 293 293 VAL VAL A . n A 1 44 THR 44 294 294 THR THR A . n A 1 45 SER 45 295 295 SER SER A . n A 1 46 TYR 46 296 296 TYR TYR A . n A 1 47 GLN 47 297 297 GLN ALA A . n A 1 48 GLU 48 298 298 GLU GLU A . n A 1 49 ALA 49 299 299 ALA ALA A . n A 1 50 CYS 50 300 300 CYS CYS A . n A 1 51 SER 51 301 301 SER SER A . n A 1 52 ILE 52 302 302 ILE ILE A . n A 1 53 PRO 53 303 303 PRO PRO A . n A 1 54 GLY 54 304 304 GLY GLY A . n A 1 55 ILE 55 305 305 ILE ILE A . n A 1 56 GLY 56 306 306 GLY GLY A . n A 1 57 LYS 57 307 307 LYS ALA A . n A 1 58 ARG 58 308 308 ARG ARG A . n A 1 59 MET 59 309 309 MET MET A . n A 1 60 ALA 60 310 310 ALA ALA A . n A 1 61 GLU 61 311 311 GLU GLU A . n A 1 62 LYS 62 312 312 LYS LYS A . n A 1 63 ILE 63 313 313 ILE ILE A . n A 1 64 ILE 64 314 314 ILE ILE A . n A 1 65 GLU 65 315 315 GLU GLU A . n A 1 66 ILE 66 316 316 ILE ILE A . n A 1 67 LEU 67 317 317 LEU LEU A . n A 1 68 GLU 68 318 318 GLU GLU A . n A 1 69 SER 69 319 319 SER SER A . n A 1 70 GLY 70 320 320 GLY GLY A . n A 1 71 HIS 71 321 321 HIS HIS A . n A 1 72 LEU 72 322 322 LEU LEU A . n A 1 73 ARG 73 323 323 ARG ARG A . n A 1 74 LYS 74 324 324 LYS LYS A . n A 1 75 LEU 75 325 325 LEU LEU A . n A 1 76 ASP 76 326 326 ASP ASP A . n A 1 77 HIS 77 327 327 HIS HIS A . n A 1 78 ILE 78 328 328 ILE ILE A . n A 1 79 SER 79 329 329 SER SER A . n A 1 80 GLU 80 330 330 GLU GLU A . n A 1 81 SER 81 331 331 SER SER A . n A 1 82 VAL 82 332 332 VAL VAL A . n A 1 83 PRO 83 333 333 PRO PRO A . n A 1 84 VAL 84 334 334 VAL VAL A . n A 1 85 LEU 85 335 335 LEU LEU A . n A 1 86 GLU 86 336 336 GLU GLU A . n A 1 87 LEU 87 337 337 LEU LEU A . n A 1 88 PHE 88 338 338 PHE PHE A . n A 1 89 SER 89 339 339 SER SER A . n A 1 90 ASN 90 340 340 ASN ASN A . n A 1 91 ILE 91 341 341 ILE ILE A . n A 1 92 TRP 92 342 342 TRP TRP A . n A 1 93 GLY 93 343 343 GLY GLY A . n A 1 94 ALA 94 344 344 ALA ALA A . n A 1 95 GLY 95 345 345 GLY GLY A . n A 1 96 THR 96 346 346 THR THR A . n A 1 97 LYS 97 347 347 LYS LYS A . n A 1 98 THR 98 348 348 THR THR A . n A 1 99 ALA 99 349 349 ALA ALA A . n A 1 100 GLN 100 350 350 GLN GLN A . n A 1 101 MET 101 351 351 MET MET A . n A 1 102 TRP 102 352 352 TRP TRP A . n A 1 103 TYR 103 353 353 TYR TYR A . n A 1 104 GLN 104 354 354 GLN GLN A . n A 1 105 GLN 105 355 355 GLN GLN A . n A 1 106 GLY 106 356 356 GLY GLY A . n A 1 107 PHE 107 357 357 PHE PHE A . n A 1 108 ARG 108 358 358 ARG ARG A . n A 1 109 SER 109 359 359 SER SER A . n A 1 110 LEU 110 360 360 LEU LEU A . n A 1 111 GLU 111 361 361 GLU GLU A . n A 1 112 ASP 112 362 362 ASP ASP A . n A 1 113 ILE 113 363 363 ILE ILE A . n A 1 114 ARG 114 364 364 ARG ARG A . n A 1 115 SER 115 365 365 SER SER A . n A 1 116 GLN 116 366 366 GLN GLN A . n A 1 117 ALA 117 367 367 ALA ALA A . n A 1 118 SER 118 368 368 SER SER A . n A 1 119 LEU 119 369 369 LEU LEU A . n A 1 120 THR 120 370 370 THR THR A . n A 1 121 THR 121 371 371 THR THR A . n A 1 122 GLN 122 372 372 GLN GLN A . n A 1 123 GLN 123 373 373 GLN GLN A . n A 1 124 ALA 124 374 374 ALA ALA A . n A 1 125 ILE 125 375 375 ILE ILE A . n A 1 126 GLY 126 376 376 GLY GLY A . n A 1 127 LEU 127 377 377 LEU LEU A . n A 1 128 LYS 128 378 378 LYS LYS A . n A 1 129 HIS 129 379 379 HIS HIS A . n A 1 130 TYR 130 380 380 TYR TYR A . n A 1 131 SER 131 381 381 SER SER A . n A 1 132 ASP 132 382 382 ASP ASP A . n A 1 133 PHE 133 383 383 PHE PHE A . n A 1 134 LEU 134 384 384 LEU LEU A . n A 1 135 GLU 135 385 385 GLU GLU A . n A 1 136 ARG 136 386 386 ARG ARG A . n A 1 137 MET 137 387 387 MET MET A . n A 1 138 PRO 138 388 388 PRO PRO A . n A 1 139 ARG 139 389 389 ARG ARG A . n A 1 140 GLU 140 390 390 GLU GLU A . n A 1 141 GLU 141 391 391 GLU GLU A . n A 1 142 ALA 142 392 392 ALA ALA A . n A 1 143 THR 143 393 393 THR THR A . n A 1 144 GLU 144 394 394 GLU GLU A . n A 1 145 ILE 145 395 395 ILE ILE A . n A 1 146 GLU 146 396 396 GLU GLU A . n A 1 147 GLN 147 397 397 GLN GLN A . n A 1 148 THR 148 398 398 THR THR A . n A 1 149 VAL 149 399 399 VAL VAL A . n A 1 150 GLN 150 400 400 GLN GLN A . n A 1 151 LYS 151 401 401 LYS LYS A . n A 1 152 ALA 152 402 402 ALA ALA A . n A 1 153 ALA 153 403 403 ALA ALA A . n A 1 154 GLN 154 404 404 GLN GLN A . n A 1 155 ALA 155 405 405 ALA ALA A . n A 1 156 PHE 156 406 406 PHE PHE A . n A 1 157 ASN 157 407 407 ASN ASN A . n A 1 158 SER 158 408 408 SER SER A . n A 1 159 GLY 159 409 409 GLY GLY A . n A 1 160 LEU 160 410 410 LEU LEU A . n A 1 161 LEU 161 411 411 LEU LEU A . n A 1 162 CYS 162 412 412 CYS CYS A . n A 1 163 VAL 163 413 413 VAL VAL A . n A 1 164 ALA 164 414 414 ALA ALA A . n A 1 165 CYS 165 415 415 CYS CYS A . n A 1 166 GLY 166 416 416 GLY GLY A . n A 1 167 SER 167 417 417 SER SER A . n A 1 168 TYR 168 418 418 TYR TYR A . n A 1 169 ARG 169 419 419 ARG ARG A . n A 1 170 ARG 170 420 420 ARG ARG A . n A 1 171 GLY 171 421 421 GLY GLY A . n A 1 172 LYS 172 422 422 LYS LYS A . n A 1 173 ALA 173 423 423 ALA ALA A . n A 1 174 THR 174 424 424 THR THR A . n A 1 175 CYS 175 425 425 CYS CYS A . n A 1 176 GLY 176 426 426 GLY GLY A . n A 1 177 ASP 177 427 427 ASP ASP A . n A 1 178 VAL 178 428 428 VAL VAL A . n A 1 179 ASP 179 429 429 ASP ASP A . n A 1 180 VAL 180 430 430 VAL VAL A . n A 1 181 LEU 181 431 431 LEU LEU A . n A 1 182 ILE 182 432 432 ILE ILE A . n A 1 183 THR 183 433 433 THR THR A . n A 1 184 HIS 184 434 434 HIS HIS A . n A 1 185 PRO 185 435 435 PRO PRO A . n A 1 186 ASP 186 436 436 ASP ASP A . n A 1 187 GLY 187 437 437 GLY GLY A . n A 1 188 ARG 188 438 438 ARG ALA A . n A 1 189 SER 189 439 439 SER SER A . n A 1 190 HIS 190 440 440 HIS HIS A . n A 1 191 ARG 191 441 441 ARG ARG A . n A 1 192 GLY 192 442 442 GLY GLY A . n A 1 193 ILE 193 443 443 ILE ILE A . n A 1 194 PHE 194 444 444 PHE PHE A . n A 1 195 SER 195 445 445 SER SER A . n A 1 196 ARG 196 446 446 ARG ARG A . n A 1 197 LEU 197 447 447 LEU LEU A . n A 1 198 LEU 198 448 448 LEU LEU A . n A 1 199 ASP 199 449 449 ASP ASP A . n A 1 200 SER 200 450 450 SER SER A . n A 1 201 LEU 201 451 451 LEU LEU A . n A 1 202 ARG 202 452 452 ARG ARG A . n A 1 203 GLN 203 453 453 GLN GLN A . n A 1 204 GLU 204 454 454 GLU GLU A . n A 1 205 GLY 205 455 455 GLY GLY A . n A 1 206 PHE 206 456 456 PHE PHE A . n A 1 207 LEU 207 457 457 LEU LEU A . n A 1 208 THR 208 458 458 THR THR A . n A 1 209 ASP 209 459 459 ASP ASP A . n A 1 210 ASP 210 460 460 ASP ASP A . n A 1 211 LEU 211 461 461 LEU LEU A . n A 1 212 VAL 212 462 462 VAL VAL A . n A 1 213 SER 213 463 463 SER SER A . n A 1 214 GLN 214 464 464 GLN GLN A . n A 1 215 GLU 215 465 465 GLU GLU A . n A 1 216 GLU 216 466 466 GLU GLU A . n A 1 217 ASN 217 467 467 ASN ASN A . n A 1 218 GLY 218 468 468 GLY GLY A . n A 1 219 GLN 219 469 469 GLN GLN A . n A 1 220 GLN 220 470 470 GLN GLN A . n A 1 221 GLN 221 471 471 GLN GLN A . n A 1 222 LYS 222 472 472 LYS LYS A . n A 1 223 TYR 223 473 473 TYR TYR A . n A 1 224 LEU 224 474 474 LEU LEU A . n A 1 225 GLY 225 475 475 GLY GLY A . n A 1 226 VAL 226 476 476 VAL VAL A . n A 1 227 CYS 227 477 477 CYS CYS A . n A 1 228 ARG 228 478 478 ARG ARG A . n A 1 229 LEU 229 479 479 LEU LEU A . n A 1 230 PRO 230 480 480 PRO PRO A . n A 1 231 GLY 231 481 481 GLY GLY A . n A 1 232 PRO 232 482 482 PRO PRO A . n A 1 233 GLY 233 483 483 GLY GLY A . n A 1 234 ARG 234 484 484 ARG ARG A . n A 1 235 ARG 235 485 485 ARG ARG A . n A 1 236 HIS 236 486 486 HIS HIS A . n A 1 237 ARG 237 487 487 ARG ARG A . n A 1 238 ARG 238 488 488 ARG ARG A . n A 1 239 LEU 239 489 489 LEU LEU A . n A 1 240 ASP 240 490 490 ASP ASP A . n A 1 241 ILE 241 491 491 ILE ILE A . n A 1 242 ILE 242 492 492 ILE ILE A . n A 1 243 VAL 243 493 493 VAL VAL A . n A 1 244 VAL 244 494 494 VAL VAL A . n A 1 245 PRO 245 495 495 PRO PRO A . n A 1 246 TYR 246 496 496 TYR TYR A . n A 1 247 SER 247 497 497 SER SER A . n A 1 248 GLU 248 498 498 GLU GLU A . n A 1 249 PHE 249 499 499 PHE PHE A . n A 1 250 ALA 250 500 500 ALA ALA A . n A 1 251 CYS 251 501 501 CYS CYS A . n A 1 252 ALA 252 502 502 ALA ALA A . n A 1 253 LEU 253 503 503 LEU LEU A . n A 1 254 LEU 254 504 504 LEU LEU A . n A 1 255 TYR 255 505 505 TYR TYR A . n A 1 256 PHE 256 506 506 PHE PHE A . n A 1 257 THR 257 507 507 THR THR A . n A 1 258 GLY 258 508 508 GLY GLY A . n A 1 259 SER 259 509 509 SER SER A . n A 1 260 ALA 260 510 510 ALA ALA A . n A 1 261 HIS 261 511 511 HIS HIS A . n A 1 262 PHE 262 512 512 PHE PHE A . n A 1 263 ASN 263 513 513 ASN ASN A . n A 1 264 ARG 264 514 514 ARG ARG A . n A 1 265 SER 265 515 515 SER SER A . n A 1 266 MET 266 516 516 MET MET A . n A 1 267 ARG 267 517 517 ARG ARG A . n A 1 268 ALA 268 518 518 ALA ALA A . n A 1 269 LEU 269 519 519 LEU LEU A . n A 1 270 ALA 270 520 520 ALA ALA A . n A 1 271 LYS 271 521 521 LYS LYS A . n A 1 272 THR 272 522 522 THR THR A . n A 1 273 LYS 273 523 523 LYS LYS A . n A 1 274 GLY 274 524 524 GLY GLY A . n A 1 275 MET 275 525 525 MET MET A . n A 1 276 SER 276 526 526 SER SER A . n A 1 277 LEU 277 527 527 LEU LEU A . n A 1 278 SER 278 528 528 SER SER A . n A 1 279 GLU 279 529 529 GLU GLU A . n A 1 280 HIS 280 530 530 HIS HIS A . n A 1 281 ALA 281 531 531 ALA ALA A . n A 1 282 LEU 282 532 532 LEU LEU A . n A 1 283 SER 283 533 533 SER SER A . n A 1 284 THR 284 534 534 THR THR A . n A 1 285 ALA 285 535 535 ALA ALA A . n A 1 286 VAL 286 536 536 VAL VAL A . n A 1 287 VAL 287 537 537 VAL VAL A . n A 1 288 ARG 288 538 538 ARG ARG A . n A 1 289 ASN 289 539 539 ASN ASN A . n A 1 290 THR 290 540 540 THR THR A . n A 1 291 HIS 291 541 541 HIS HIS A . n A 1 292 GLY 292 542 542 GLY GLY A . n A 1 293 CYS 293 543 543 CYS ALA A . n A 1 294 LYS 294 544 544 LYS LYS A . n A 1 295 VAL 295 545 545 VAL ALA A . n A 1 296 GLY 296 546 546 GLY GLY A . n A 1 297 PRO 297 547 547 PRO PRO A . n A 1 298 GLY 298 548 548 GLY GLY A . n A 1 299 ARG 299 549 549 ARG ARG A . n A 1 300 VAL 300 550 550 VAL VAL A . n A 1 301 LEU 301 551 551 LEU LEU A . n A 1 302 PRO 302 552 552 PRO PRO A . n A 1 303 THR 303 553 553 THR THR A . n A 1 304 PRO 304 554 554 PRO PRO A . n A 1 305 THR 305 555 555 THR THR A . n A 1 306 GLU 306 556 556 GLU GLU A . n A 1 307 LYS 307 557 557 LYS LYS A . n A 1 308 ASP 308 558 558 ASP ASP A . n A 1 309 VAL 309 559 559 VAL VAL A . n A 1 310 PHE 310 560 560 PHE PHE A . n A 1 311 ARG 311 561 561 ARG ARG A . n A 1 312 LEU 312 562 562 LEU LEU A . n A 1 313 LEU 313 563 563 LEU LEU A . n A 1 314 GLY 314 564 564 GLY GLY A . n A 1 315 LEU 315 565 565 LEU LEU A . n A 1 316 PRO 316 566 566 PRO PRO A . n A 1 317 TYR 317 567 567 TYR TYR A . n A 1 318 ARG 318 568 568 ARG ARG A . n A 1 319 GLU 319 569 569 GLU GLU A . n A 1 320 PRO 320 570 570 PRO PRO A . n A 1 321 ALA 321 571 571 ALA ALA A . n A 1 322 GLU 322 572 572 GLU GLU A . n A 1 323 ARG 323 573 573 ARG ARG A . n A 1 324 ASP 324 574 574 ASP ASP A . n A 1 325 TRP 325 575 575 TRP TRP A . n B 2 1 DC 1 1 1 DC DC T . n B 2 2 DG 2 2 2 DG DG T . n B 2 3 DG 3 3 3 DG DG T . n B 2 4 DC 4 4 4 DC DC T . n B 2 5 DG 5 5 5 DG DG T . n B 2 6 DG 6 6 6 DG DG T . n B 2 7 DT 7 7 7 DT DT T . n B 2 8 DA 8 8 8 DA DA T . n B 2 9 DC 9 9 9 DC DC T . n B 2 10 DT 10 10 10 DT DT T . n B 2 11 DG 11 11 11 DG DG T . n C 3 1 DC 1 1 1 DC DC P . n C 3 2 DA 2 2 2 DA DA P . n C 3 3 DG 3 3 3 DG DG P . n C 3 4 DT 4 4 4 DT DT P . n C 3 5 DA 5 5 5 DA DA P . n C 3 6 DC 6 6 6 DC DC P . n C 3 7 CAR 7 7 7 CAR CAR P . n D 4 1 DG 1 1 1 DG DG D . n D 4 2 DC 2 2 2 DC DC D . n D 4 3 DC 3 3 3 DC DC D . n D 4 4 DG 4 4 4 DG DG D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 PPV 1 576 400 PPV PPV A . F 6 NA 1 1 1 NA NA A . G 6 NA 1 4 4 NA NA A . H 7 MG 1 577 1 MG MG A . I 8 HOH 1 2 2 HOH HOH A . I 8 HOH 2 3 3 HOH HOH A . I 8 HOH 3 5 5 HOH HOH A . I 8 HOH 4 8 8 HOH HOH A . I 8 HOH 5 11 11 HOH HOH A . I 8 HOH 6 12 12 HOH HOH A . I 8 HOH 7 13 13 HOH HOH A . I 8 HOH 8 15 15 HOH HOH A . I 8 HOH 9 18 18 HOH HOH A . I 8 HOH 10 19 19 HOH HOH A . I 8 HOH 11 20 20 HOH HOH A . I 8 HOH 12 21 21 HOH HOH A . I 8 HOH 13 22 22 HOH HOH A . I 8 HOH 14 23 23 HOH HOH A . I 8 HOH 15 25 25 HOH HOH A . I 8 HOH 16 27 27 HOH HOH A . I 8 HOH 17 29 29 HOH HOH A . I 8 HOH 18 30 30 HOH HOH A . I 8 HOH 19 31 31 HOH HOH A . I 8 HOH 20 32 32 HOH HOH A . I 8 HOH 21 36 36 HOH HOH A . I 8 HOH 22 37 37 HOH HOH A . I 8 HOH 23 38 38 HOH HOH A . I 8 HOH 24 39 39 HOH HOH A . I 8 HOH 25 40 40 HOH HOH A . I 8 HOH 26 43 43 HOH HOH A . I 8 HOH 27 47 47 HOH HOH A . I 8 HOH 28 48 48 HOH HOH A . I 8 HOH 29 51 51 HOH HOH A . I 8 HOH 30 52 52 HOH HOH A . I 8 HOH 31 54 54 HOH HOH A . I 8 HOH 32 55 55 HOH HOH A . I 8 HOH 33 57 57 HOH HOH A . I 8 HOH 34 58 58 HOH HOH A . I 8 HOH 35 59 59 HOH HOH A . I 8 HOH 36 62 62 HOH HOH A . I 8 HOH 37 63 63 HOH HOH A . I 8 HOH 38 64 64 HOH HOH A . I 8 HOH 39 66 66 HOH HOH A . I 8 HOH 40 67 67 HOH HOH A . I 8 HOH 41 69 69 HOH HOH A . I 8 HOH 42 70 70 HOH HOH A . I 8 HOH 43 71 71 HOH HOH A . I 8 HOH 44 72 72 HOH HOH A . I 8 HOH 45 73 73 HOH HOH A . I 8 HOH 46 77 77 HOH HOH A . I 8 HOH 47 78 78 HOH HOH A . I 8 HOH 48 79 79 HOH HOH A . I 8 HOH 49 80 80 HOH HOH A . I 8 HOH 50 82 82 HOH HOH A . I 8 HOH 51 86 86 HOH HOH A . I 8 HOH 52 87 87 HOH HOH A . I 8 HOH 53 89 89 HOH HOH A . I 8 HOH 54 90 90 HOH HOH A . I 8 HOH 55 92 92 HOH HOH A . I 8 HOH 56 94 94 HOH HOH A . I 8 HOH 57 95 95 HOH HOH A . I 8 HOH 58 96 96 HOH HOH A . I 8 HOH 59 97 97 HOH HOH A . I 8 HOH 60 98 98 HOH HOH A . I 8 HOH 61 99 99 HOH HOH A . I 8 HOH 62 101 101 HOH HOH A . I 8 HOH 63 102 102 HOH HOH A . I 8 HOH 64 104 104 HOH HOH A . I 8 HOH 65 105 105 HOH HOH A . I 8 HOH 66 108 108 HOH HOH A . I 8 HOH 67 112 112 HOH HOH A . I 8 HOH 68 113 113 HOH HOH A . I 8 HOH 69 114 114 HOH HOH A . I 8 HOH 70 115 115 HOH HOH A . I 8 HOH 71 116 116 HOH HOH A . I 8 HOH 72 117 117 HOH HOH A . I 8 HOH 73 119 119 HOH HOH A . I 8 HOH 74 120 120 HOH HOH A . I 8 HOH 75 121 121 HOH HOH A . I 8 HOH 76 122 122 HOH HOH A . I 8 HOH 77 123 123 HOH HOH A . I 8 HOH 78 124 124 HOH HOH A . I 8 HOH 79 125 125 HOH HOH A . I 8 HOH 80 126 126 HOH HOH A . I 8 HOH 81 127 127 HOH HOH A . I 8 HOH 82 128 128 HOH HOH A . I 8 HOH 83 129 129 HOH HOH A . I 8 HOH 84 131 131 HOH HOH A . I 8 HOH 85 132 132 HOH HOH A . I 8 HOH 86 133 133 HOH HOH A . I 8 HOH 87 134 134 HOH HOH A . I 8 HOH 88 135 135 HOH HOH A . I 8 HOH 89 136 136 HOH HOH A . I 8 HOH 90 138 138 HOH HOH A . I 8 HOH 91 139 139 HOH HOH A . I 8 HOH 92 141 141 HOH HOH A . I 8 HOH 93 142 142 HOH HOH A . I 8 HOH 94 143 143 HOH HOH A . I 8 HOH 95 144 144 HOH HOH A . I 8 HOH 96 149 149 HOH HOH A . I 8 HOH 97 150 150 HOH HOH A . I 8 HOH 98 152 152 HOH HOH A . I 8 HOH 99 153 153 HOH HOH A . I 8 HOH 100 154 154 HOH HOH A . I 8 HOH 101 156 156 HOH HOH A . I 8 HOH 102 157 157 HOH HOH A . I 8 HOH 103 159 159 HOH HOH A . I 8 HOH 104 160 160 HOH HOH A . I 8 HOH 105 161 161 HOH HOH A . I 8 HOH 106 162 162 HOH HOH A . I 8 HOH 107 164 164 HOH HOH A . I 8 HOH 108 165 165 HOH HOH A . I 8 HOH 109 167 167 HOH HOH A . I 8 HOH 110 168 168 HOH HOH A . I 8 HOH 111 169 169 HOH HOH A . I 8 HOH 112 170 170 HOH HOH A . I 8 HOH 113 171 171 HOH HOH A . I 8 HOH 114 172 172 HOH HOH A . I 8 HOH 115 173 173 HOH HOH A . I 8 HOH 116 174 174 HOH HOH A . I 8 HOH 117 175 175 HOH HOH A . I 8 HOH 118 176 176 HOH HOH A . I 8 HOH 119 177 177 HOH HOH A . I 8 HOH 120 178 178 HOH HOH A . I 8 HOH 121 179 179 HOH HOH A . I 8 HOH 122 181 181 HOH HOH A . I 8 HOH 123 182 182 HOH HOH A . I 8 HOH 124 183 183 HOH HOH A . I 8 HOH 125 184 184 HOH HOH A . I 8 HOH 126 185 185 HOH HOH A . I 8 HOH 127 186 186 HOH HOH A . I 8 HOH 128 187 187 HOH HOH A . I 8 HOH 129 190 190 HOH HOH A . I 8 HOH 130 191 191 HOH HOH A . I 8 HOH 131 192 192 HOH HOH A . I 8 HOH 132 194 194 HOH HOH A . I 8 HOH 133 195 195 HOH HOH A . I 8 HOH 134 196 196 HOH HOH A . I 8 HOH 135 197 197 HOH HOH A . I 8 HOH 136 198 198 HOH HOH A . I 8 HOH 137 200 200 HOH HOH A . I 8 HOH 138 201 201 HOH HOH A . I 8 HOH 139 202 202 HOH HOH A . I 8 HOH 140 206 206 HOH HOH A . I 8 HOH 141 207 207 HOH HOH A . I 8 HOH 142 208 208 HOH HOH A . I 8 HOH 143 210 210 HOH HOH A . I 8 HOH 144 213 213 HOH HOH A . I 8 HOH 145 214 214 HOH HOH A . I 8 HOH 146 217 217 HOH HOH A . I 8 HOH 147 218 218 HOH HOH A . I 8 HOH 148 220 220 HOH HOH A . I 8 HOH 149 222 222 HOH HOH A . I 8 HOH 150 223 223 HOH HOH A . I 8 HOH 151 226 226 HOH HOH A . I 8 HOH 152 229 229 HOH HOH A . I 8 HOH 153 230 230 HOH HOH A . I 8 HOH 154 231 231 HOH HOH A . I 8 HOH 155 232 232 HOH HOH A . I 8 HOH 156 233 233 HOH HOH A . I 8 HOH 157 234 234 HOH HOH A . I 8 HOH 158 235 235 HOH HOH A . I 8 HOH 159 236 236 HOH HOH A . I 8 HOH 160 237 237 HOH HOH A . I 8 HOH 161 238 238 HOH HOH A . I 8 HOH 162 239 239 HOH HOH A . I 8 HOH 163 240 240 HOH HOH A . I 8 HOH 164 242 242 HOH HOH A . I 8 HOH 165 244 244 HOH HOH A . I 8 HOH 166 245 245 HOH HOH A . I 8 HOH 167 246 246 HOH HOH A . I 8 HOH 168 249 249 HOH HOH A . I 8 HOH 169 250 250 HOH HOH A . I 8 HOH 170 578 1 HOH HOH A . I 8 HOH 171 579 4 HOH HOH A . I 8 HOH 172 580 251 HOH HOH A . I 8 HOH 173 581 252 HOH HOH A . I 8 HOH 174 582 253 HOH HOH A . I 8 HOH 175 583 254 HOH HOH A . I 8 HOH 176 584 255 HOH HOH A . I 8 HOH 177 585 256 HOH HOH A . I 8 HOH 178 586 257 HOH HOH A . I 8 HOH 179 587 258 HOH HOH A . I 8 HOH 180 588 259 HOH HOH A . I 8 HOH 181 589 260 HOH HOH A . I 8 HOH 182 590 261 HOH HOH A . I 8 HOH 183 591 262 HOH HOH A . I 8 HOH 184 592 264 HOH HOH A . I 8 HOH 185 593 265 HOH HOH A . I 8 HOH 186 594 266 HOH HOH A . I 8 HOH 187 595 267 HOH HOH A . I 8 HOH 188 596 268 HOH HOH A . I 8 HOH 189 597 270 HOH HOH A . I 8 HOH 190 598 272 HOH HOH A . I 8 HOH 191 599 273 HOH HOH A . I 8 HOH 192 600 276 HOH HOH A . I 8 HOH 193 601 277 HOH HOH A . I 8 HOH 194 602 279 HOH HOH A . I 8 HOH 195 603 280 HOH HOH A . I 8 HOH 196 604 282 HOH HOH A . I 8 HOH 197 605 285 HOH HOH A . I 8 HOH 198 606 286 HOH HOH A . I 8 HOH 199 607 287 HOH HOH A . I 8 HOH 200 608 289 HOH HOH A . I 8 HOH 201 609 290 HOH HOH A . I 8 HOH 202 610 291 HOH HOH A . I 8 HOH 203 611 292 HOH HOH A . I 8 HOH 204 612 293 HOH HOH A . I 8 HOH 205 613 294 HOH HOH A . I 8 HOH 206 614 295 HOH HOH A . I 8 HOH 207 615 296 HOH HOH A . I 8 HOH 208 616 298 HOH HOH A . J 8 HOH 1 12 10 HOH HOH T . J 8 HOH 2 14 14 HOH HOH T . J 8 HOH 3 17 17 HOH HOH T . J 8 HOH 4 24 24 HOH HOH T . J 8 HOH 5 28 28 HOH HOH T . J 8 HOH 6 41 41 HOH HOH T . J 8 HOH 7 42 42 HOH HOH T . J 8 HOH 8 44 44 HOH HOH T . J 8 HOH 9 45 45 HOH HOH T . J 8 HOH 10 49 49 HOH HOH T . J 8 HOH 11 50 50 HOH HOH T . J 8 HOH 12 56 56 HOH HOH T . J 8 HOH 13 60 60 HOH HOH T . J 8 HOH 14 61 61 HOH HOH T . J 8 HOH 15 74 74 HOH HOH T . J 8 HOH 16 76 76 HOH HOH T . J 8 HOH 17 81 81 HOH HOH T . J 8 HOH 18 84 84 HOH HOH T . J 8 HOH 19 88 88 HOH HOH T . J 8 HOH 20 103 103 HOH HOH T . J 8 HOH 21 110 110 HOH HOH T . J 8 HOH 22 118 118 HOH HOH T . J 8 HOH 23 130 130 HOH HOH T . J 8 HOH 24 140 140 HOH HOH T . J 8 HOH 25 145 145 HOH HOH T . J 8 HOH 26 148 148 HOH HOH T . J 8 HOH 27 155 155 HOH HOH T . J 8 HOH 28 166 166 HOH HOH T . J 8 HOH 29 188 188 HOH HOH T . J 8 HOH 30 193 193 HOH HOH T . J 8 HOH 31 204 204 HOH HOH T . J 8 HOH 32 211 211 HOH HOH T . J 8 HOH 33 227 227 HOH HOH T . J 8 HOH 34 228 228 HOH HOH T . J 8 HOH 35 269 269 HOH HOH T . J 8 HOH 36 281 281 HOH HOH T . J 8 HOH 37 283 283 HOH HOH T . J 8 HOH 38 297 297 HOH HOH T . K 8 HOH 1 8 6 HOH HOH P . K 8 HOH 2 9 7 HOH HOH P . K 8 HOH 3 16 16 HOH HOH P . K 8 HOH 4 26 26 HOH HOH P . K 8 HOH 5 33 33 HOH HOH P . K 8 HOH 6 34 34 HOH HOH P . K 8 HOH 7 35 35 HOH HOH P . K 8 HOH 8 53 53 HOH HOH P . K 8 HOH 9 65 65 HOH HOH P . K 8 HOH 10 68 68 HOH HOH P . K 8 HOH 11 75 75 HOH HOH P . K 8 HOH 12 85 85 HOH HOH P . K 8 HOH 13 93 93 HOH HOH P . K 8 HOH 14 100 100 HOH HOH P . K 8 HOH 15 107 107 HOH HOH P . K 8 HOH 16 109 109 HOH HOH P . K 8 HOH 17 146 146 HOH HOH P . K 8 HOH 18 147 147 HOH HOH P . K 8 HOH 19 151 151 HOH HOH P . K 8 HOH 20 158 158 HOH HOH P . K 8 HOH 21 163 163 HOH HOH P . K 8 HOH 22 180 180 HOH HOH P . K 8 HOH 23 189 189 HOH HOH P . K 8 HOH 24 203 203 HOH HOH P . K 8 HOH 25 209 209 HOH HOH P . K 8 HOH 26 212 212 HOH HOH P . K 8 HOH 27 215 215 HOH HOH P . K 8 HOH 28 216 216 HOH HOH P . K 8 HOH 29 219 219 HOH HOH P . K 8 HOH 30 225 225 HOH HOH P . K 8 HOH 31 241 241 HOH HOH P . K 8 HOH 32 263 263 HOH HOH P . K 8 HOH 33 275 275 HOH HOH P . L 8 HOH 1 83 83 HOH HOH D . L 8 HOH 2 91 91 HOH HOH D . L 8 HOH 3 106 106 HOH HOH D . L 8 HOH 4 199 199 HOH HOH D . L 8 HOH 5 221 221 HOH HOH D . L 8 HOH 6 224 224 HOH HOH D . L 8 HOH 7 243 243 HOH HOH D . L 8 HOH 8 271 271 HOH HOH D . L 8 HOH 9 274 274 HOH HOH D . L 8 HOH 10 284 284 HOH HOH D . L 8 HOH 11 288 288 HOH HOH D . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A HIS 252 ? CG ? A HIS 2 CG 2 1 Y 1 A HIS 252 ? ND1 ? A HIS 2 ND1 3 1 Y 1 A HIS 252 ? CD2 ? A HIS 2 CD2 4 1 Y 1 A HIS 252 ? CE1 ? A HIS 2 CE1 5 1 Y 1 A HIS 252 ? NE2 ? A HIS 2 NE2 6 1 Y 1 A GLU 258 ? CG ? A GLU 8 CG 7 1 Y 1 A GLU 258 ? CD ? A GLU 8 CD 8 1 Y 1 A GLU 258 ? OE1 ? A GLU 8 OE1 9 1 Y 1 A GLU 258 ? OE2 ? A GLU 8 OE2 10 1 Y 1 A VAL 293 ? CG1 ? A VAL 43 CG1 11 1 Y 1 A VAL 293 ? CG2 ? A VAL 43 CG2 12 1 Y 1 A THR 294 ? OG1 ? A THR 44 OG1 13 1 Y 1 A THR 294 ? CG2 ? A THR 44 CG2 14 1 Y 1 A GLN 297 ? CG ? A GLN 47 CG 15 1 Y 1 A GLN 297 ? CD ? A GLN 47 CD 16 1 Y 1 A GLN 297 ? OE1 ? A GLN 47 OE1 17 1 Y 1 A GLN 297 ? NE2 ? A GLN 47 NE2 18 1 Y 1 A LYS 307 ? CG ? A LYS 57 CG 19 1 Y 1 A LYS 307 ? CD ? A LYS 57 CD 20 1 Y 1 A LYS 307 ? CE ? A LYS 57 CE 21 1 Y 1 A LYS 307 ? NZ ? A LYS 57 NZ 22 1 Y 1 A ARG 438 ? CG ? A ARG 188 CG 23 1 Y 1 A ARG 438 ? CD ? A ARG 188 CD 24 1 Y 1 A ARG 438 ? NE ? A ARG 188 NE 25 1 Y 1 A ARG 438 ? CZ ? A ARG 188 CZ 26 1 Y 1 A ARG 438 ? NH1 ? A ARG 188 NH1 27 1 Y 1 A ARG 438 ? NH2 ? A ARG 188 NH2 28 1 Y 1 A CYS 543 ? SG ? A CYS 293 SG 29 1 Y 1 A VAL 545 ? CG1 ? A VAL 295 CG1 30 1 Y 1 A VAL 545 ? CG2 ? A VAL 295 CG2 # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 MOLREP . ? program 'Alexei Vaguine' alexei@ysbl.york.ac.uk phasing http://www.ccp4.ac.uk/dist/html/molrep.html Fortran_77 ? 4 PHENIX . ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 5 PDB_EXTRACT 3.100 'Jan. 22, 2010' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? # _cell.length_a 56.068 _cell.length_b 62.637 _cell.length_c 140.163 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3MDA _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 3MDA _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 19 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 3MDA _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.86 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 56.93 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'hanging drop' _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '2-propanol, pH 5.5, hanging drop, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type RIGAKU _diffrn_detector.pdbx_collection_date 2006-07-14 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.504 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.pdbx_wavelength_list 1.504 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 3MDA _reflns.observed_criterion_sigma_F 2 _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 2.03 _reflns.d_resolution_low 50 _reflns.number_all ? _reflns.number_obs 52786 _reflns.percent_possible_obs 91.5 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 3MDA _refine.ls_d_res_high 2.031 _refine.ls_d_res_low 30.565 _refine.pdbx_ls_sigma_F 0.03 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 86.970 _refine.ls_number_reflns_obs 28398 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details ? _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.200 _refine.ls_R_factor_R_work 0.197 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.259 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.960 _refine.ls_number_reflns_R_free 1408 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 39.796 _refine.solvent_model_param_bsol 51.230 _refine.solvent_model_param_ksol 0.340 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -8.510 _refine.aniso_B[2][2] 9.965 _refine.aniso_B[3][3] -1.455 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] -0.000 _refine.aniso_B[2][3] -0.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 1.230 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.110 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.900 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.810 _refine.B_iso_max 87.70 _refine.B_iso_min 17.56 _refine.occupancy_max 1.00 _refine.occupancy_min 1.00 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2528 _refine_hist.pdbx_number_atoms_nucleic_acid 447 _refine_hist.pdbx_number_atoms_ligand 12 _refine_hist.number_atoms_solvent 290 _refine_hist.number_atoms_total 3277 _refine_hist.d_res_high 2.031 _refine_hist.d_res_low 30.565 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 3087 0.006 ? ? 'X-RAY DIFFRACTION' ? f_angle_d 4260 1.111 ? ? 'X-RAY DIFFRACTION' ? f_chiral_restr 463 0.062 ? ? 'X-RAY DIFFRACTION' ? f_plane_restr 476 0.004 ? ? 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 1181 19.236 ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 2.031 2.104 10 66.000 2021 . 0.274 0.298 . 123 . 2144 . . 'X-RAY DIFFRACTION' 2.104 2.188 10 77.000 2362 . 0.238 0.275 . 111 . 2473 . . 'X-RAY DIFFRACTION' 2.188 2.287 10 80.000 2408 . 0.223 0.276 . 133 . 2541 . . 'X-RAY DIFFRACTION' 2.287 2.408 10 83.000 2551 . 0.214 0.289 . 144 . 2695 . . 'X-RAY DIFFRACTION' 2.408 2.559 10 85.000 2597 . 0.210 0.277 . 162 . 2759 . . 'X-RAY DIFFRACTION' 2.559 2.756 10 90.000 2742 . 0.215 0.288 . 147 . 2889 . . 'X-RAY DIFFRACTION' 2.756 3.033 10 92.000 2874 . 0.207 0.266 . 131 . 3005 . . 'X-RAY DIFFRACTION' 3.033 3.472 10 96.000 3026 . 0.188 0.241 . 137 . 3163 . . 'X-RAY DIFFRACTION' 3.472 4.372 10 99.000 3121 . 0.165 0.216 . 173 . 3294 . . 'X-RAY DIFFRACTION' 4.372 30.568 10 99.000 3288 . 0.182 0.254 . 147 . 3435 . . 'X-RAY DIFFRACTION' # _struct.entry_id 3MDA _struct.title 'DNA polymerase lambda in complex with araC' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3MDA _struct_keywords.text 'protein-DNA complex, Lyase, Transferase-DNA complex' _struct_keywords.pdbx_keywords Lyase,Transferase/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 7 ? I N N 8 ? J N N 8 ? K N N 8 ? L N N 8 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP DPOLL_HUMAN Q9UGP5 1 ;HNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISES VPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLL CVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDI IVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYREPA ERDW ; 252 ? 2 PDB 3MDA 3MDA 2 ? ? ? 3 PDB 3MDA 3MDA 3 ? ? ? 4 PDB 3MDA 3MDA 4 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3MDA A 2 ? 325 ? Q9UGP5 252 ? 575 ? 252 575 2 2 3MDA T 1 ? 11 ? 3MDA 1 ? 11 ? 1 11 3 3 3MDA P 1 ? 7 ? 3MDA 1 ? 7 ? 1 7 4 4 3MDA D 1 ? 4 ? 3MDA 1 ? 4 ? 1 4 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3MDA _struct_ref_seq_dif.mon_id ALA _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q9UGP5 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 251 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5820 ? 1 MORE -68 ? 1 'SSA (A^2)' 17260 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 3 ? GLN A 20 ? ASN A 253 GLN A 270 1 ? 18 HELX_P HELX_P2 2 ASP A 22 ? PHE A 39 ? ASP A 272 PHE A 289 1 ? 18 HELX_P HELX_P3 3 SER A 45 ? ILE A 52 ? SER A 295 ILE A 302 1 ? 8 HELX_P HELX_P4 4 GLY A 56 ? SER A 69 ? GLY A 306 SER A 319 1 ? 14 HELX_P HELX_P5 5 LEU A 72 ? HIS A 77 ? LEU A 322 HIS A 327 5 ? 6 HELX_P HELX_P6 6 SER A 81 ? ASN A 90 ? SER A 331 ASN A 340 1 ? 10 HELX_P HELX_P7 7 GLY A 95 ? GLN A 105 ? GLY A 345 GLN A 355 1 ? 11 HELX_P HELX_P8 8 SER A 109 ? ALA A 117 ? SER A 359 ALA A 367 1 ? 9 HELX_P HELX_P9 9 THR A 120 ? HIS A 129 ? THR A 370 HIS A 379 1 ? 10 HELX_P HELX_P10 10 SER A 131 ? GLU A 135 ? SER A 381 GLU A 385 5 ? 5 HELX_P HELX_P11 11 ARG A 139 ? ALA A 155 ? ARG A 389 ALA A 405 1 ? 17 HELX_P HELX_P12 12 CYS A 165 ? ARG A 170 ? CYS A 415 ARG A 420 1 ? 6 HELX_P HELX_P13 13 ILE A 193 ? GLU A 204 ? ILE A 443 GLU A 454 1 ? 12 HELX_P HELX_P14 14 PRO A 245 ? SER A 247 ? PRO A 495 SER A 497 5 ? 3 HELX_P HELX_P15 15 GLU A 248 ? GLY A 258 ? GLU A 498 GLY A 508 1 ? 11 HELX_P HELX_P16 16 SER A 259 ? LYS A 273 ? SER A 509 LYS A 523 1 ? 15 HELX_P HELX_P17 17 THR A 305 ? LEU A 313 ? THR A 555 LEU A 563 1 ? 9 HELX_P HELX_P18 18 GLU A 319 ? ARG A 323 ? GLU A 569 ARG A 573 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? C DC 6 "O3'" ? ? ? 1_555 C CAR 7 P ? ? P DC 6 P CAR 7 1_555 ? ? ? ? ? ? ? 1.616 ? ? metalc1 metalc ? ? F NA . NA ? ? ? 1_555 A SER 89 O ? ? A NA 1 A SER 339 1_555 ? ? ? ? ? ? ? 2.562 ? ? metalc2 metalc ? ? F NA . NA ? ? ? 1_555 A ILE 91 O ? ? A NA 1 A ILE 341 1_555 ? ? ? ? ? ? ? 2.496 ? ? metalc3 metalc ? ? F NA . NA ? ? ? 1_555 A ALA 94 O ? ? A NA 1 A ALA 344 1_555 ? ? ? ? ? ? ? 2.451 ? ? metalc4 metalc ? ? F NA . NA ? ? ? 1_555 I HOH . O ? ? A NA 1 A HOH 579 1_555 ? ? ? ? ? ? ? 2.622 ? ? metalc5 metalc ? ? F NA . NA ? ? ? 1_555 C DA 5 OP1 ? ? A NA 1 P DA 5 1_555 ? ? ? ? ? ? ? 2.453 ? ? metalc6 metalc ? ? F NA . NA ? ? ? 1_555 K HOH . O ? ? A NA 1 P HOH 8 1_555 ? ? ? ? ? ? ? 2.795 ? ? metalc7 metalc ? ? G NA . NA ? ? ? 1_555 I HOH . O ? ? A NA 4 A HOH 66 1_555 ? ? ? ? ? ? ? 2.819 ? ? metalc8 metalc ? ? G NA . NA ? ? ? 1_555 A SER 213 O ? ? A NA 4 A SER 463 1_555 ? ? ? ? ? ? ? 2.620 ? ? metalc9 metalc ? ? G NA . NA ? ? ? 1_555 I HOH . O ? ? A NA 4 A HOH 599 1_555 ? ? ? ? ? ? ? 2.944 ? ? metalc10 metalc ? ? G NA . NA ? ? ? 1_555 J HOH . O ? ? A NA 4 T HOH 76 1_555 ? ? ? ? ? ? ? 2.913 ? ? metalc11 metalc ? ? G NA . NA ? ? ? 1_555 J HOH . O ? ? A NA 4 T HOH 145 1_555 ? ? ? ? ? ? ? 2.888 ? ? metalc12 metalc ? ? A ASP 177 OD1 ? ? ? 1_555 H MG . MG ? ? A ASP 427 A MG 577 1_555 ? ? ? ? ? ? ? 2.212 ? ? metalc13 metalc ? ? A ASP 179 OD2 ? ? ? 1_555 H MG . MG ? ? A ASP 429 A MG 577 1_555 ? ? ? ? ? ? ? 2.248 ? ? metalc14 metalc ? ? E PPV . O31 ? ? ? 1_555 H MG . MG ? ? A PPV 576 A MG 577 1_555 ? ? ? ? ? ? ? 2.263 ? ? metalc15 metalc ? ? E PPV . O22 ? ? ? 1_555 H MG . MG ? ? A PPV 576 A MG 577 1_555 ? ? ? ? ? ? ? 2.326 ? ? metalc16 metalc ? ? H MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 577 A HOH 585 1_555 ? ? ? ? ? ? ? 2.383 ? ? metalc17 metalc ? ? H MG . MG ? ? ? 1_555 C CAR 7 OP1 ? ? A MG 577 P CAR 7 1_555 ? ? ? ? ? ? ? 2.891 ? ? hydrog1 hydrog ? ? B DC 1 N3 ? ? ? 1_555 D DG 4 N1 ? ? T DC 1 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DC 1 N4 ? ? ? 1_555 D DG 4 O6 ? ? T DC 1 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DC 1 O2 ? ? ? 1_555 D DG 4 N2 ? ? T DC 1 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DG 2 N1 ? ? ? 1_555 D DC 3 N3 ? ? T DG 2 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DG 2 N2 ? ? ? 1_555 D DC 3 O2 ? ? T DG 2 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DG 2 O6 ? ? ? 1_555 D DC 3 N4 ? ? T DG 2 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DG 3 N1 ? ? ? 1_555 D DC 2 N3 ? ? T DG 3 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 3 N2 ? ? ? 1_555 D DC 2 O2 ? ? T DG 3 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 3 O6 ? ? ? 1_555 D DC 2 N4 ? ? T DG 3 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DC 4 N3 ? ? ? 1_555 D DG 1 N1 ? ? T DC 4 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DC 4 N4 ? ? ? 1_555 D DG 1 O6 ? ? T DC 4 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 4 O2 ? ? ? 1_555 D DG 1 N2 ? ? T DC 4 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DG 5 N1 ? ? ? 1_555 C CAR 7 N3 ? ? T DG 5 P CAR 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DG 5 N2 ? ? ? 1_555 C CAR 7 O2 ? ? T DG 5 P CAR 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DG 5 O6 ? ? ? 1_555 C CAR 7 N4 ? ? T DG 5 P CAR 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DG 6 N1 ? ? ? 1_555 C DC 6 N3 ? ? T DG 6 P DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DG 6 N2 ? ? ? 1_555 C DC 6 O2 ? ? T DG 6 P DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DG 6 O6 ? ? ? 1_555 C DC 6 N4 ? ? T DG 6 P DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DT 7 N3 ? ? ? 1_555 C DA 5 N1 ? ? T DT 7 P DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DT 7 O4 ? ? ? 1_555 C DA 5 N6 ? ? T DT 7 P DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DA 8 N1 ? ? ? 1_555 C DT 4 N3 ? ? T DA 8 P DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DA 8 N6 ? ? ? 1_555 C DT 4 O4 ? ? T DA 8 P DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DC 9 N3 ? ? ? 1_555 C DG 3 N1 ? ? T DC 9 P DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DC 9 N4 ? ? ? 1_555 C DG 3 O6 ? ? T DC 9 P DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DC 9 O2 ? ? ? 1_555 C DG 3 N2 ? ? T DC 9 P DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DT 10 N3 ? ? ? 1_555 C DA 2 N1 ? ? T DT 10 P DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DT 10 O4 ? ? ? 1_555 C DA 2 N6 ? ? T DT 10 P DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DG 11 N1 ? ? ? 1_555 C DC 1 N3 ? ? T DG 11 P DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DG 11 N2 ? ? ? 1_555 C DC 1 O2 ? ? T DG 11 P DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DG 11 O6 ? ? ? 1_555 C DC 1 N4 ? ? T DG 11 P DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A SER 89 ? A SER 339 ? 1_555 NA ? F NA . ? A NA 1 ? 1_555 O ? A ILE 91 ? A ILE 341 ? 1_555 97.6 ? 2 O ? A SER 89 ? A SER 339 ? 1_555 NA ? F NA . ? A NA 1 ? 1_555 O ? A ALA 94 ? A ALA 344 ? 1_555 86.3 ? 3 O ? A ILE 91 ? A ILE 341 ? 1_555 NA ? F NA . ? A NA 1 ? 1_555 O ? A ALA 94 ? A ALA 344 ? 1_555 88.5 ? 4 O ? A SER 89 ? A SER 339 ? 1_555 NA ? F NA . ? A NA 1 ? 1_555 O ? I HOH . ? A HOH 579 ? 1_555 90.6 ? 5 O ? A ILE 91 ? A ILE 341 ? 1_555 NA ? F NA . ? A NA 1 ? 1_555 O ? I HOH . ? A HOH 579 ? 1_555 91.0 ? 6 O ? A ALA 94 ? A ALA 344 ? 1_555 NA ? F NA . ? A NA 1 ? 1_555 O ? I HOH . ? A HOH 579 ? 1_555 176.8 ? 7 O ? A SER 89 ? A SER 339 ? 1_555 NA ? F NA . ? A NA 1 ? 1_555 OP1 ? C DA 5 ? P DA 5 ? 1_555 161.5 ? 8 O ? A ILE 91 ? A ILE 341 ? 1_555 NA ? F NA . ? A NA 1 ? 1_555 OP1 ? C DA 5 ? P DA 5 ? 1_555 100.8 ? 9 O ? A ALA 94 ? A ALA 344 ? 1_555 NA ? F NA . ? A NA 1 ? 1_555 OP1 ? C DA 5 ? P DA 5 ? 1_555 95.7 ? 10 O ? I HOH . ? A HOH 579 ? 1_555 NA ? F NA . ? A NA 1 ? 1_555 OP1 ? C DA 5 ? P DA 5 ? 1_555 87.5 ? 11 O ? A SER 89 ? A SER 339 ? 1_555 NA ? F NA . ? A NA 1 ? 1_555 O ? K HOH . ? P HOH 8 ? 1_555 71.7 ? 12 O ? A ILE 91 ? A ILE 341 ? 1_555 NA ? F NA . ? A NA 1 ? 1_555 O ? K HOH . ? P HOH 8 ? 1_555 168.3 ? 13 O ? A ALA 94 ? A ALA 344 ? 1_555 NA ? F NA . ? A NA 1 ? 1_555 O ? K HOH . ? P HOH 8 ? 1_555 85.9 ? 14 O ? I HOH . ? A HOH 579 ? 1_555 NA ? F NA . ? A NA 1 ? 1_555 O ? K HOH . ? P HOH 8 ? 1_555 94.0 ? 15 OP1 ? C DA 5 ? P DA 5 ? 1_555 NA ? F NA . ? A NA 1 ? 1_555 O ? K HOH . ? P HOH 8 ? 1_555 90.0 ? 16 O ? I HOH . ? A HOH 66 ? 1_555 NA ? G NA . ? A NA 4 ? 1_555 O ? A SER 213 ? A SER 463 ? 1_555 83.7 ? 17 O ? I HOH . ? A HOH 66 ? 1_555 NA ? G NA . ? A NA 4 ? 1_555 O ? I HOH . ? A HOH 599 ? 1_555 93.2 ? 18 O ? A SER 213 ? A SER 463 ? 1_555 NA ? G NA . ? A NA 4 ? 1_555 O ? I HOH . ? A HOH 599 ? 1_555 159.7 ? 19 O ? I HOH . ? A HOH 66 ? 1_555 NA ? G NA . ? A NA 4 ? 1_555 O ? J HOH . ? T HOH 76 ? 1_555 101.9 ? 20 O ? A SER 213 ? A SER 463 ? 1_555 NA ? G NA . ? A NA 4 ? 1_555 O ? J HOH . ? T HOH 76 ? 1_555 96.4 ? 21 O ? I HOH . ? A HOH 599 ? 1_555 NA ? G NA . ? A NA 4 ? 1_555 O ? J HOH . ? T HOH 76 ? 1_555 103.9 ? 22 O ? I HOH . ? A HOH 66 ? 1_555 NA ? G NA . ? A NA 4 ? 1_555 O ? J HOH . ? T HOH 145 ? 1_555 157.8 ? 23 O ? A SER 213 ? A SER 463 ? 1_555 NA ? G NA . ? A NA 4 ? 1_555 O ? J HOH . ? T HOH 145 ? 1_555 82.9 ? 24 O ? I HOH . ? A HOH 599 ? 1_555 NA ? G NA . ? A NA 4 ? 1_555 O ? J HOH . ? T HOH 145 ? 1_555 93.2 ? 25 O ? J HOH . ? T HOH 76 ? 1_555 NA ? G NA . ? A NA 4 ? 1_555 O ? J HOH . ? T HOH 145 ? 1_555 97.1 ? 26 OD1 ? A ASP 177 ? A ASP 427 ? 1_555 MG ? H MG . ? A MG 577 ? 1_555 OD2 ? A ASP 179 ? A ASP 429 ? 1_555 96.9 ? 27 OD1 ? A ASP 177 ? A ASP 427 ? 1_555 MG ? H MG . ? A MG 577 ? 1_555 O31 ? E PPV . ? A PPV 576 ? 1_555 163.1 ? 28 OD2 ? A ASP 179 ? A ASP 429 ? 1_555 MG ? H MG . ? A MG 577 ? 1_555 O31 ? E PPV . ? A PPV 576 ? 1_555 97.3 ? 29 OD1 ? A ASP 177 ? A ASP 427 ? 1_555 MG ? H MG . ? A MG 577 ? 1_555 O22 ? E PPV . ? A PPV 576 ? 1_555 83.6 ? 30 OD2 ? A ASP 179 ? A ASP 429 ? 1_555 MG ? H MG . ? A MG 577 ? 1_555 O22 ? E PPV . ? A PPV 576 ? 1_555 164.5 ? 31 O31 ? E PPV . ? A PPV 576 ? 1_555 MG ? H MG . ? A MG 577 ? 1_555 O22 ? E PPV . ? A PPV 576 ? 1_555 85.1 ? 32 OD1 ? A ASP 177 ? A ASP 427 ? 1_555 MG ? H MG . ? A MG 577 ? 1_555 O ? I HOH . ? A HOH 585 ? 1_555 91.5 ? 33 OD2 ? A ASP 179 ? A ASP 429 ? 1_555 MG ? H MG . ? A MG 577 ? 1_555 O ? I HOH . ? A HOH 585 ? 1_555 88.4 ? 34 O31 ? E PPV . ? A PPV 576 ? 1_555 MG ? H MG . ? A MG 577 ? 1_555 O ? I HOH . ? A HOH 585 ? 1_555 79.9 ? 35 O22 ? E PPV . ? A PPV 576 ? 1_555 MG ? H MG . ? A MG 577 ? 1_555 O ? I HOH . ? A HOH 585 ? 1_555 107.1 ? 36 OD1 ? A ASP 177 ? A ASP 427 ? 1_555 MG ? H MG . ? A MG 577 ? 1_555 OP1 ? C CAR 7 ? P CAR 7 ? 1_555 76.1 ? 37 OD2 ? A ASP 179 ? A ASP 429 ? 1_555 MG ? H MG . ? A MG 577 ? 1_555 OP1 ? C CAR 7 ? P CAR 7 ? 1_555 76.5 ? 38 O31 ? E PPV . ? A PPV 576 ? 1_555 MG ? H MG . ? A MG 577 ? 1_555 OP1 ? C CAR 7 ? P CAR 7 ? 1_555 116.2 ? 39 O22 ? E PPV . ? A PPV 576 ? 1_555 MG ? H MG . ? A MG 577 ? 1_555 OP1 ? C CAR 7 ? P CAR 7 ? 1_555 88.7 ? 40 O ? I HOH . ? A HOH 585 ? 1_555 MG ? H MG . ? A MG 577 ? 1_555 OP1 ? C CAR 7 ? P CAR 7 ? 1_555 158.9 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 258 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 508 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 259 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 509 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.86 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 5 ? C ? 3 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 MET A 137 ? PRO A 138 ? MET A 387 PRO A 388 A 2 THR A 174 ? CYS A 175 ? THR A 424 CYS A 425 B 1 LEU A 161 ? ALA A 164 ? LEU A 411 ALA A 414 B 2 VAL A 178 ? THR A 183 ? VAL A 428 THR A 433 B 3 ARG A 237 ? VAL A 243 ? ARG A 487 VAL A 493 B 4 LYS A 222 ? CYS A 227 ? LYS A 472 CYS A 477 B 5 LEU A 207 ? VAL A 212 ? LEU A 457 VAL A 462 C 1 SER A 276 ? LEU A 277 ? SER A 526 LEU A 527 C 2 LEU A 282 ? THR A 284 ? LEU A 532 THR A 534 C 3 ARG A 299 ? LEU A 301 ? ARG A 549 LEU A 551 D 1 VAL A 287 ? ARG A 288 ? VAL A 537 ARG A 538 D 2 LYS A 294 ? GLY A 296 ? LYS A 544 GLY A 546 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N MET A 137 ? N MET A 387 O CYS A 175 ? O CYS A 425 B 1 2 N VAL A 163 ? N VAL A 413 O LEU A 181 ? O LEU A 431 B 2 3 N VAL A 180 ? N VAL A 430 O ASP A 240 ? O ASP A 490 B 3 4 O ARG A 237 ? O ARG A 487 N CYS A 227 ? N CYS A 477 B 4 5 O VAL A 226 ? O VAL A 476 N THR A 208 ? N THR A 458 C 1 2 N SER A 276 ? N SER A 526 O SER A 283 ? O SER A 533 C 2 3 N LEU A 282 ? N LEU A 532 O LEU A 301 ? O LEU A 551 D 1 2 N VAL A 287 ? N VAL A 537 O GLY A 296 ? O GLY A 546 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A PPV 576 ? 13 'BINDING SITE FOR RESIDUE PPV A 576' AC2 Software A NA 1 ? 6 'BINDING SITE FOR RESIDUE NA A 1' AC3 Software A NA 4 ? 5 'BINDING SITE FOR RESIDUE NA A 4' AC4 Software A MG 577 ? 5 'BINDING SITE FOR RESIDUE MG A 577' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 13 HOH I . ? HOH A 77 . ? 1_555 ? 2 AC1 13 HOH I . ? HOH A 132 . ? 1_555 ? 3 AC1 13 HOH I . ? HOH A 210 . ? 1_555 ? 4 AC1 13 ARG A 136 ? ARG A 386 . ? 1_555 ? 5 AC1 13 GLY A 166 ? GLY A 416 . ? 1_555 ? 6 AC1 13 SER A 167 ? SER A 417 . ? 1_555 ? 7 AC1 13 ARG A 170 ? ARG A 420 . ? 1_555 ? 8 AC1 13 GLY A 176 ? GLY A 426 . ? 1_555 ? 9 AC1 13 ASP A 177 ? ASP A 427 . ? 1_555 ? 10 AC1 13 ASP A 179 ? ASP A 429 . ? 1_555 ? 11 AC1 13 MG H . ? MG A 577 . ? 1_555 ? 12 AC1 13 HOH I . ? HOH A 585 . ? 1_555 ? 13 AC1 13 CAR C 7 ? CAR P 7 . ? 1_555 ? 14 AC2 6 SER A 89 ? SER A 339 . ? 1_555 ? 15 AC2 6 ILE A 91 ? ILE A 341 . ? 1_555 ? 16 AC2 6 ALA A 94 ? ALA A 344 . ? 1_555 ? 17 AC2 6 HOH I . ? HOH A 579 . ? 1_555 ? 18 AC2 6 DA C 5 ? DA P 5 . ? 1_555 ? 19 AC2 6 HOH K . ? HOH P 8 . ? 1_555 ? 20 AC3 5 HOH I . ? HOH A 66 . ? 1_555 ? 21 AC3 5 SER A 213 ? SER A 463 . ? 1_555 ? 22 AC3 5 HOH I . ? HOH A 599 . ? 1_555 ? 23 AC3 5 HOH J . ? HOH T 76 . ? 1_555 ? 24 AC3 5 HOH J . ? HOH T 145 . ? 1_555 ? 25 AC4 5 ASP A 177 ? ASP A 427 . ? 1_555 ? 26 AC4 5 ASP A 179 ? ASP A 429 . ? 1_555 ? 27 AC4 5 PPV E . ? PPV A 576 . ? 1_555 ? 28 AC4 5 HOH I . ? HOH A 585 . ? 1_555 ? 29 AC4 5 CAR C 7 ? CAR P 7 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 234 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 P _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 209 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 D _pdbx_validate_rmsd_bond.auth_comp_id_1 DG _pdbx_validate_rmsd_bond.auth_seq_id_1 1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 D _pdbx_validate_rmsd_bond.auth_comp_id_2 DG _pdbx_validate_rmsd_bond.auth_seq_id_2 1 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.481 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.126 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" T DC 1 ? ? "C1'" T DC 1 ? ? N1 T DC 1 ? ? 103.40 108.00 -4.60 0.70 N 2 1 "C3'" T DG 2 ? ? "C2'" T DG 2 ? ? "C1'" T DG 2 ? ? 97.31 102.40 -5.09 0.80 N 3 1 "O4'" T DG 2 ? ? "C1'" T DG 2 ? ? N9 T DG 2 ? ? 113.38 108.30 5.08 0.30 N 4 1 "O4'" T DG 5 ? ? "C1'" T DG 5 ? ? N9 T DG 5 ? ? 101.58 108.00 -6.42 0.70 N 5 1 "O4'" T DT 10 ? ? "C1'" T DT 10 ? ? N1 T DT 10 ? ? 100.45 108.00 -7.55 0.70 N 6 1 "O3'" P DC 6 ? ? P P CAR 7 ? ? OP2 P CAR 7 ? ? 133.90 110.50 23.40 1.10 Y 7 1 "O5'" D DG 4 ? ? "C5'" D DG 4 ? ? "C4'" D DG 4 ? ? 104.53 109.40 -4.87 0.80 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 292 ? ? -56.70 106.93 2 1 CYS A 415 ? ? -114.95 -137.38 3 1 ARG A 438 ? ? -140.37 -23.89 4 1 SER A 463 ? ? -172.01 89.75 5 1 SER A 509 ? ? -69.21 -177.54 6 1 ASN A 539 ? ? -79.88 -168.67 # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id C _pdbx_struct_mod_residue.label_comp_id CAR _pdbx_struct_mod_residue.label_seq_id 7 _pdbx_struct_mod_residue.auth_asym_id P _pdbx_struct_mod_residue.auth_comp_id CAR _pdbx_struct_mod_residue.auth_seq_id 7 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id DC _pdbx_struct_mod_residue.details ;CYTOSINE ARABINOSE-5'-PHOSPHATE ; # _phasing.method MR # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CAR P P N N 74 CAR OP1 O N N 75 CAR OP2 O N N 76 CAR OP3 O N N 77 CAR "O5'" O N N 78 CAR "C5'" C N N 79 CAR "C4'" C N R 80 CAR "O4'" O N N 81 CAR "C3'" C N S 82 CAR "O3'" O N N 83 CAR "C2'" C N S 84 CAR "O2'" O N N 85 CAR "C1'" C N R 86 CAR N1 N N N 87 CAR C2 C N N 88 CAR O2 O N N 89 CAR N3 N N N 90 CAR C4 C N N 91 CAR N4 N N N 92 CAR C5 C N N 93 CAR C6 C N N 94 CAR HOP2 H N N 95 CAR HOP3 H N N 96 CAR "H5'" H N N 97 CAR "H5''" H N N 98 CAR "H4'" H N N 99 CAR "H3'" H N N 100 CAR "HO3'" H N N 101 CAR "H2'" H N N 102 CAR "HO2'" H N N 103 CAR "H1'" H N N 104 CAR HN41 H N N 105 CAR HN42 H N N 106 CAR H5 H N N 107 CAR H6 H N N 108 CYS N N N N 109 CYS CA C N R 110 CYS C C N N 111 CYS O O N N 112 CYS CB C N N 113 CYS SG S N N 114 CYS OXT O N N 115 CYS H H N N 116 CYS H2 H N N 117 CYS HA H N N 118 CYS HB2 H N N 119 CYS HB3 H N N 120 CYS HG H N N 121 CYS HXT H N N 122 DA OP3 O N N 123 DA P P N N 124 DA OP1 O N N 125 DA OP2 O N N 126 DA "O5'" O N N 127 DA "C5'" C N N 128 DA "C4'" C N R 129 DA "O4'" O N N 130 DA "C3'" C N S 131 DA "O3'" O N N 132 DA "C2'" C N N 133 DA "C1'" C N R 134 DA N9 N Y N 135 DA C8 C Y N 136 DA N7 N Y N 137 DA C5 C Y N 138 DA C6 C Y N 139 DA N6 N N N 140 DA N1 N Y N 141 DA C2 C Y N 142 DA N3 N Y N 143 DA C4 C Y N 144 DA HOP3 H N N 145 DA HOP2 H N N 146 DA "H5'" H N N 147 DA "H5''" H N N 148 DA "H4'" H N N 149 DA "H3'" H N N 150 DA "HO3'" H N N 151 DA "H2'" H N N 152 DA "H2''" H N N 153 DA "H1'" H N N 154 DA H8 H N N 155 DA H61 H N N 156 DA H62 H N N 157 DA H2 H N N 158 DC OP3 O N N 159 DC P P N N 160 DC OP1 O N N 161 DC OP2 O N N 162 DC "O5'" O N N 163 DC "C5'" C N N 164 DC "C4'" C N R 165 DC "O4'" O N N 166 DC "C3'" C N S 167 DC "O3'" O N N 168 DC "C2'" C N N 169 DC "C1'" C N R 170 DC N1 N N N 171 DC C2 C N N 172 DC O2 O N N 173 DC N3 N N N 174 DC C4 C N N 175 DC N4 N N N 176 DC C5 C N N 177 DC C6 C N N 178 DC HOP3 H N N 179 DC HOP2 H N N 180 DC "H5'" H N N 181 DC "H5''" H N N 182 DC "H4'" H N N 183 DC "H3'" H N N 184 DC "HO3'" H N N 185 DC "H2'" H N N 186 DC "H2''" H N N 187 DC "H1'" H N N 188 DC H41 H N N 189 DC H42 H N N 190 DC H5 H N N 191 DC H6 H N N 192 DG OP3 O N N 193 DG P P N N 194 DG OP1 O N N 195 DG OP2 O N N 196 DG "O5'" O N N 197 DG "C5'" C N N 198 DG "C4'" C N R 199 DG "O4'" O N N 200 DG "C3'" C N S 201 DG "O3'" O N N 202 DG "C2'" C N N 203 DG "C1'" C N R 204 DG N9 N Y N 205 DG C8 C Y N 206 DG N7 N Y N 207 DG C5 C Y N 208 DG C6 C N N 209 DG O6 O N N 210 DG N1 N N N 211 DG C2 C N N 212 DG N2 N N N 213 DG N3 N N N 214 DG C4 C Y N 215 DG HOP3 H N N 216 DG HOP2 H N N 217 DG "H5'" H N N 218 DG "H5''" H N N 219 DG "H4'" H N N 220 DG "H3'" H N N 221 DG "HO3'" H N N 222 DG "H2'" H N N 223 DG "H2''" H N N 224 DG "H1'" H N N 225 DG H8 H N N 226 DG H1 H N N 227 DG H21 H N N 228 DG H22 H N N 229 DT OP3 O N N 230 DT P P N N 231 DT OP1 O N N 232 DT OP2 O N N 233 DT "O5'" O N N 234 DT "C5'" C N N 235 DT "C4'" C N R 236 DT "O4'" O N N 237 DT "C3'" C N S 238 DT "O3'" O N N 239 DT "C2'" C N N 240 DT "C1'" C N R 241 DT N1 N N N 242 DT C2 C N N 243 DT O2 O N N 244 DT N3 N N N 245 DT C4 C N N 246 DT O4 O N N 247 DT C5 C N N 248 DT C7 C N N 249 DT C6 C N N 250 DT HOP3 H N N 251 DT HOP2 H N N 252 DT "H5'" H N N 253 DT "H5''" H N N 254 DT "H4'" H N N 255 DT "H3'" H N N 256 DT "HO3'" H N N 257 DT "H2'" H N N 258 DT "H2''" H N N 259 DT "H1'" H N N 260 DT H3 H N N 261 DT H71 H N N 262 DT H72 H N N 263 DT H73 H N N 264 DT H6 H N N 265 GLN N N N N 266 GLN CA C N S 267 GLN C C N N 268 GLN O O N N 269 GLN CB C N N 270 GLN CG C N N 271 GLN CD C N N 272 GLN OE1 O N N 273 GLN NE2 N N N 274 GLN OXT O N N 275 GLN H H N N 276 GLN H2 H N N 277 GLN HA H N N 278 GLN HB2 H N N 279 GLN HB3 H N N 280 GLN HG2 H N N 281 GLN HG3 H N N 282 GLN HE21 H N N 283 GLN HE22 H N N 284 GLN HXT H N N 285 GLU N N N N 286 GLU CA C N S 287 GLU C C N N 288 GLU O O N N 289 GLU CB C N N 290 GLU CG C N N 291 GLU CD C N N 292 GLU OE1 O N N 293 GLU OE2 O N N 294 GLU OXT O N N 295 GLU H H N N 296 GLU H2 H N N 297 GLU HA H N N 298 GLU HB2 H N N 299 GLU HB3 H N N 300 GLU HG2 H N N 301 GLU HG3 H N N 302 GLU HE2 H N N 303 GLU HXT H N N 304 GLY N N N N 305 GLY CA C N N 306 GLY C C N N 307 GLY O O N N 308 GLY OXT O N N 309 GLY H H N N 310 GLY H2 H N N 311 GLY HA2 H N N 312 GLY HA3 H N N 313 GLY HXT H N N 314 HIS N N N N 315 HIS CA C N S 316 HIS C C N N 317 HIS O O N N 318 HIS CB C N N 319 HIS CG C Y N 320 HIS ND1 N Y N 321 HIS CD2 C Y N 322 HIS CE1 C Y N 323 HIS NE2 N Y N 324 HIS OXT O N N 325 HIS H H N N 326 HIS H2 H N N 327 HIS HA H N N 328 HIS HB2 H N N 329 HIS HB3 H N N 330 HIS HD1 H N N 331 HIS HD2 H N N 332 HIS HE1 H N N 333 HIS HE2 H N N 334 HIS HXT H N N 335 HOH O O N N 336 HOH H1 H N N 337 HOH H2 H N N 338 ILE N N N N 339 ILE CA C N S 340 ILE C C N N 341 ILE O O N N 342 ILE CB C N S 343 ILE CG1 C N N 344 ILE CG2 C N N 345 ILE CD1 C N N 346 ILE OXT O N N 347 ILE H H N N 348 ILE H2 H N N 349 ILE HA H N N 350 ILE HB H N N 351 ILE HG12 H N N 352 ILE HG13 H N N 353 ILE HG21 H N N 354 ILE HG22 H N N 355 ILE HG23 H N N 356 ILE HD11 H N N 357 ILE HD12 H N N 358 ILE HD13 H N N 359 ILE HXT H N N 360 LEU N N N N 361 LEU CA C N S 362 LEU C C N N 363 LEU O O N N 364 LEU CB C N N 365 LEU CG C N N 366 LEU CD1 C N N 367 LEU CD2 C N N 368 LEU OXT O N N 369 LEU H H N N 370 LEU H2 H N N 371 LEU HA H N N 372 LEU HB2 H N N 373 LEU HB3 H N N 374 LEU HG H N N 375 LEU HD11 H N N 376 LEU HD12 H N N 377 LEU HD13 H N N 378 LEU HD21 H N N 379 LEU HD22 H N N 380 LEU HD23 H N N 381 LEU HXT H N N 382 LYS N N N N 383 LYS CA C N S 384 LYS C C N N 385 LYS O O N N 386 LYS CB C N N 387 LYS CG C N N 388 LYS CD C N N 389 LYS CE C N N 390 LYS NZ N N N 391 LYS OXT O N N 392 LYS H H N N 393 LYS H2 H N N 394 LYS HA H N N 395 LYS HB2 H N N 396 LYS HB3 H N N 397 LYS HG2 H N N 398 LYS HG3 H N N 399 LYS HD2 H N N 400 LYS HD3 H N N 401 LYS HE2 H N N 402 LYS HE3 H N N 403 LYS HZ1 H N N 404 LYS HZ2 H N N 405 LYS HZ3 H N N 406 LYS HXT H N N 407 MET N N N N 408 MET CA C N S 409 MET C C N N 410 MET O O N N 411 MET CB C N N 412 MET CG C N N 413 MET SD S N N 414 MET CE C N N 415 MET OXT O N N 416 MET H H N N 417 MET H2 H N N 418 MET HA H N N 419 MET HB2 H N N 420 MET HB3 H N N 421 MET HG2 H N N 422 MET HG3 H N N 423 MET HE1 H N N 424 MET HE2 H N N 425 MET HE3 H N N 426 MET HXT H N N 427 MG MG MG N N 428 NA NA NA N N 429 PHE N N N N 430 PHE CA C N S 431 PHE C C N N 432 PHE O O N N 433 PHE CB C N N 434 PHE CG C Y N 435 PHE CD1 C Y N 436 PHE CD2 C Y N 437 PHE CE1 C Y N 438 PHE CE2 C Y N 439 PHE CZ C Y N 440 PHE OXT O N N 441 PHE H H N N 442 PHE H2 H N N 443 PHE HA H N N 444 PHE HB2 H N N 445 PHE HB3 H N N 446 PHE HD1 H N N 447 PHE HD2 H N N 448 PHE HE1 H N N 449 PHE HE2 H N N 450 PHE HZ H N N 451 PHE HXT H N N 452 PPV O11 O N N 453 PPV P1 P N N 454 PPV O21 O N N 455 PPV O31 O N N 456 PPV OPP O N N 457 PPV P2 P N N 458 PPV O12 O N N 459 PPV O22 O N N 460 PPV O32 O N N 461 PPV H11 H N N 462 PPV H21 H N N 463 PPV H12 H N N 464 PPV H32 H N N 465 PRO N N N N 466 PRO CA C N S 467 PRO C C N N 468 PRO O O N N 469 PRO CB C N N 470 PRO CG C N N 471 PRO CD C N N 472 PRO OXT O N N 473 PRO H H N N 474 PRO HA H N N 475 PRO HB2 H N N 476 PRO HB3 H N N 477 PRO HG2 H N N 478 PRO HG3 H N N 479 PRO HD2 H N N 480 PRO HD3 H N N 481 PRO HXT H N N 482 SER N N N N 483 SER CA C N S 484 SER C C N N 485 SER O O N N 486 SER CB C N N 487 SER OG O N N 488 SER OXT O N N 489 SER H H N N 490 SER H2 H N N 491 SER HA H N N 492 SER HB2 H N N 493 SER HB3 H N N 494 SER HG H N N 495 SER HXT H N N 496 THR N N N N 497 THR CA C N S 498 THR C C N N 499 THR O O N N 500 THR CB C N R 501 THR OG1 O N N 502 THR CG2 C N N 503 THR OXT O N N 504 THR H H N N 505 THR H2 H N N 506 THR HA H N N 507 THR HB H N N 508 THR HG1 H N N 509 THR HG21 H N N 510 THR HG22 H N N 511 THR HG23 H N N 512 THR HXT H N N 513 TRP N N N N 514 TRP CA C N S 515 TRP C C N N 516 TRP O O N N 517 TRP CB C N N 518 TRP CG C Y N 519 TRP CD1 C Y N 520 TRP CD2 C Y N 521 TRP NE1 N Y N 522 TRP CE2 C Y N 523 TRP CE3 C Y N 524 TRP CZ2 C Y N 525 TRP CZ3 C Y N 526 TRP CH2 C Y N 527 TRP OXT O N N 528 TRP H H N N 529 TRP H2 H N N 530 TRP HA H N N 531 TRP HB2 H N N 532 TRP HB3 H N N 533 TRP HD1 H N N 534 TRP HE1 H N N 535 TRP HE3 H N N 536 TRP HZ2 H N N 537 TRP HZ3 H N N 538 TRP HH2 H N N 539 TRP HXT H N N 540 TYR N N N N 541 TYR CA C N S 542 TYR C C N N 543 TYR O O N N 544 TYR CB C N N 545 TYR CG C Y N 546 TYR CD1 C Y N 547 TYR CD2 C Y N 548 TYR CE1 C Y N 549 TYR CE2 C Y N 550 TYR CZ C Y N 551 TYR OH O N N 552 TYR OXT O N N 553 TYR H H N N 554 TYR H2 H N N 555 TYR HA H N N 556 TYR HB2 H N N 557 TYR HB3 H N N 558 TYR HD1 H N N 559 TYR HD2 H N N 560 TYR HE1 H N N 561 TYR HE2 H N N 562 TYR HH H N N 563 TYR HXT H N N 564 VAL N N N N 565 VAL CA C N S 566 VAL C C N N 567 VAL O O N N 568 VAL CB C N N 569 VAL CG1 C N N 570 VAL CG2 C N N 571 VAL OXT O N N 572 VAL H H N N 573 VAL H2 H N N 574 VAL HA H N N 575 VAL HB H N N 576 VAL HG11 H N N 577 VAL HG12 H N N 578 VAL HG13 H N N 579 VAL HG21 H N N 580 VAL HG22 H N N 581 VAL HG23 H N N 582 VAL HXT H N N 583 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CAR P OP1 doub N N 70 CAR P OP2 sing N N 71 CAR P OP3 sing N N 72 CAR P "O5'" sing N N 73 CAR OP2 HOP2 sing N N 74 CAR OP3 HOP3 sing N N 75 CAR "O5'" "C5'" sing N N 76 CAR "C5'" "C4'" sing N N 77 CAR "C5'" "H5'" sing N N 78 CAR "C5'" "H5''" sing N N 79 CAR "C4'" "O4'" sing N N 80 CAR "C4'" "C3'" sing N N 81 CAR "C4'" "H4'" sing N N 82 CAR "O4'" "C1'" sing N N 83 CAR "C3'" "O3'" sing N N 84 CAR "C3'" "C2'" sing N N 85 CAR "C3'" "H3'" sing N N 86 CAR "O3'" "HO3'" sing N N 87 CAR "C2'" "O2'" sing N N 88 CAR "C2'" "C1'" sing N N 89 CAR "C2'" "H2'" sing N N 90 CAR "O2'" "HO2'" sing N N 91 CAR "C1'" N1 sing N N 92 CAR "C1'" "H1'" sing N N 93 CAR N1 C2 sing N N 94 CAR N1 C6 sing N N 95 CAR C2 O2 doub N N 96 CAR C2 N3 sing N N 97 CAR N3 C4 doub N N 98 CAR C4 N4 sing N N 99 CAR C4 C5 sing N N 100 CAR N4 HN41 sing N N 101 CAR N4 HN42 sing N N 102 CAR C5 C6 doub N N 103 CAR C5 H5 sing N N 104 CAR C6 H6 sing N N 105 CYS N CA sing N N 106 CYS N H sing N N 107 CYS N H2 sing N N 108 CYS CA C sing N N 109 CYS CA CB sing N N 110 CYS CA HA sing N N 111 CYS C O doub N N 112 CYS C OXT sing N N 113 CYS CB SG sing N N 114 CYS CB HB2 sing N N 115 CYS CB HB3 sing N N 116 CYS SG HG sing N N 117 CYS OXT HXT sing N N 118 DA OP3 P sing N N 119 DA OP3 HOP3 sing N N 120 DA P OP1 doub N N 121 DA P OP2 sing N N 122 DA P "O5'" sing N N 123 DA OP2 HOP2 sing N N 124 DA "O5'" "C5'" sing N N 125 DA "C5'" "C4'" sing N N 126 DA "C5'" "H5'" sing N N 127 DA "C5'" "H5''" sing N N 128 DA "C4'" "O4'" sing N N 129 DA "C4'" "C3'" sing N N 130 DA "C4'" "H4'" sing N N 131 DA "O4'" "C1'" sing N N 132 DA "C3'" "O3'" sing N N 133 DA "C3'" "C2'" sing N N 134 DA "C3'" "H3'" sing N N 135 DA "O3'" "HO3'" sing N N 136 DA "C2'" "C1'" sing N N 137 DA "C2'" "H2'" sing N N 138 DA "C2'" "H2''" sing N N 139 DA "C1'" N9 sing N N 140 DA "C1'" "H1'" sing N N 141 DA N9 C8 sing Y N 142 DA N9 C4 sing Y N 143 DA C8 N7 doub Y N 144 DA C8 H8 sing N N 145 DA N7 C5 sing Y N 146 DA C5 C6 sing Y N 147 DA C5 C4 doub Y N 148 DA C6 N6 sing N N 149 DA C6 N1 doub Y N 150 DA N6 H61 sing N N 151 DA N6 H62 sing N N 152 DA N1 C2 sing Y N 153 DA C2 N3 doub Y N 154 DA C2 H2 sing N N 155 DA N3 C4 sing Y N 156 DC OP3 P sing N N 157 DC OP3 HOP3 sing N N 158 DC P OP1 doub N N 159 DC P OP2 sing N N 160 DC P "O5'" sing N N 161 DC OP2 HOP2 sing N N 162 DC "O5'" "C5'" sing N N 163 DC "C5'" "C4'" sing N N 164 DC "C5'" "H5'" sing N N 165 DC "C5'" "H5''" sing N N 166 DC "C4'" "O4'" sing N N 167 DC "C4'" "C3'" sing N N 168 DC "C4'" "H4'" sing N N 169 DC "O4'" "C1'" sing N N 170 DC "C3'" "O3'" sing N N 171 DC "C3'" "C2'" sing N N 172 DC "C3'" "H3'" sing N N 173 DC "O3'" "HO3'" sing N N 174 DC "C2'" "C1'" sing N N 175 DC "C2'" "H2'" sing N N 176 DC "C2'" "H2''" sing N N 177 DC "C1'" N1 sing N N 178 DC "C1'" "H1'" sing N N 179 DC N1 C2 sing N N 180 DC N1 C6 sing N N 181 DC C2 O2 doub N N 182 DC C2 N3 sing N N 183 DC N3 C4 doub N N 184 DC C4 N4 sing N N 185 DC C4 C5 sing N N 186 DC N4 H41 sing N N 187 DC N4 H42 sing N N 188 DC C5 C6 doub N N 189 DC C5 H5 sing N N 190 DC C6 H6 sing N N 191 DG OP3 P sing N N 192 DG OP3 HOP3 sing N N 193 DG P OP1 doub N N 194 DG P OP2 sing N N 195 DG P "O5'" sing N N 196 DG OP2 HOP2 sing N N 197 DG "O5'" "C5'" sing N N 198 DG "C5'" "C4'" sing N N 199 DG "C5'" "H5'" sing N N 200 DG "C5'" "H5''" sing N N 201 DG "C4'" "O4'" sing N N 202 DG "C4'" "C3'" sing N N 203 DG "C4'" "H4'" sing N N 204 DG "O4'" "C1'" sing N N 205 DG "C3'" "O3'" sing N N 206 DG "C3'" "C2'" sing N N 207 DG "C3'" "H3'" sing N N 208 DG "O3'" "HO3'" sing N N 209 DG "C2'" "C1'" sing N N 210 DG "C2'" "H2'" sing N N 211 DG "C2'" "H2''" sing N N 212 DG "C1'" N9 sing N N 213 DG "C1'" "H1'" sing N N 214 DG N9 C8 sing Y N 215 DG N9 C4 sing Y N 216 DG C8 N7 doub Y N 217 DG C8 H8 sing N N 218 DG N7 C5 sing Y N 219 DG C5 C6 sing N N 220 DG C5 C4 doub Y N 221 DG C6 O6 doub N N 222 DG C6 N1 sing N N 223 DG N1 C2 sing N N 224 DG N1 H1 sing N N 225 DG C2 N2 sing N N 226 DG C2 N3 doub N N 227 DG N2 H21 sing N N 228 DG N2 H22 sing N N 229 DG N3 C4 sing N N 230 DT OP3 P sing N N 231 DT OP3 HOP3 sing N N 232 DT P OP1 doub N N 233 DT P OP2 sing N N 234 DT P "O5'" sing N N 235 DT OP2 HOP2 sing N N 236 DT "O5'" "C5'" sing N N 237 DT "C5'" "C4'" sing N N 238 DT "C5'" "H5'" sing N N 239 DT "C5'" "H5''" sing N N 240 DT "C4'" "O4'" sing N N 241 DT "C4'" "C3'" sing N N 242 DT "C4'" "H4'" sing N N 243 DT "O4'" "C1'" sing N N 244 DT "C3'" "O3'" sing N N 245 DT "C3'" "C2'" sing N N 246 DT "C3'" "H3'" sing N N 247 DT "O3'" "HO3'" sing N N 248 DT "C2'" "C1'" sing N N 249 DT "C2'" "H2'" sing N N 250 DT "C2'" "H2''" sing N N 251 DT "C1'" N1 sing N N 252 DT "C1'" "H1'" sing N N 253 DT N1 C2 sing N N 254 DT N1 C6 sing N N 255 DT C2 O2 doub N N 256 DT C2 N3 sing N N 257 DT N3 C4 sing N N 258 DT N3 H3 sing N N 259 DT C4 O4 doub N N 260 DT C4 C5 sing N N 261 DT C5 C7 sing N N 262 DT C5 C6 doub N N 263 DT C7 H71 sing N N 264 DT C7 H72 sing N N 265 DT C7 H73 sing N N 266 DT C6 H6 sing N N 267 GLN N CA sing N N 268 GLN N H sing N N 269 GLN N H2 sing N N 270 GLN CA C sing N N 271 GLN CA CB sing N N 272 GLN CA HA sing N N 273 GLN C O doub N N 274 GLN C OXT sing N N 275 GLN CB CG sing N N 276 GLN CB HB2 sing N N 277 GLN CB HB3 sing N N 278 GLN CG CD sing N N 279 GLN CG HG2 sing N N 280 GLN CG HG3 sing N N 281 GLN CD OE1 doub N N 282 GLN CD NE2 sing N N 283 GLN NE2 HE21 sing N N 284 GLN NE2 HE22 sing N N 285 GLN OXT HXT sing N N 286 GLU N CA sing N N 287 GLU N H sing N N 288 GLU N H2 sing N N 289 GLU CA C sing N N 290 GLU CA CB sing N N 291 GLU CA HA sing N N 292 GLU C O doub N N 293 GLU C OXT sing N N 294 GLU CB CG sing N N 295 GLU CB HB2 sing N N 296 GLU CB HB3 sing N N 297 GLU CG CD sing N N 298 GLU CG HG2 sing N N 299 GLU CG HG3 sing N N 300 GLU CD OE1 doub N N 301 GLU CD OE2 sing N N 302 GLU OE2 HE2 sing N N 303 GLU OXT HXT sing N N 304 GLY N CA sing N N 305 GLY N H sing N N 306 GLY N H2 sing N N 307 GLY CA C sing N N 308 GLY CA HA2 sing N N 309 GLY CA HA3 sing N N 310 GLY C O doub N N 311 GLY C OXT sing N N 312 GLY OXT HXT sing N N 313 HIS N CA sing N N 314 HIS N H sing N N 315 HIS N H2 sing N N 316 HIS CA C sing N N 317 HIS CA CB sing N N 318 HIS CA HA sing N N 319 HIS C O doub N N 320 HIS C OXT sing N N 321 HIS CB CG sing N N 322 HIS CB HB2 sing N N 323 HIS CB HB3 sing N N 324 HIS CG ND1 sing Y N 325 HIS CG CD2 doub Y N 326 HIS ND1 CE1 doub Y N 327 HIS ND1 HD1 sing N N 328 HIS CD2 NE2 sing Y N 329 HIS CD2 HD2 sing N N 330 HIS CE1 NE2 sing Y N 331 HIS CE1 HE1 sing N N 332 HIS NE2 HE2 sing N N 333 HIS OXT HXT sing N N 334 HOH O H1 sing N N 335 HOH O H2 sing N N 336 ILE N CA sing N N 337 ILE N H sing N N 338 ILE N H2 sing N N 339 ILE CA C sing N N 340 ILE CA CB sing N N 341 ILE CA HA sing N N 342 ILE C O doub N N 343 ILE C OXT sing N N 344 ILE CB CG1 sing N N 345 ILE CB CG2 sing N N 346 ILE CB HB sing N N 347 ILE CG1 CD1 sing N N 348 ILE CG1 HG12 sing N N 349 ILE CG1 HG13 sing N N 350 ILE CG2 HG21 sing N N 351 ILE CG2 HG22 sing N N 352 ILE CG2 HG23 sing N N 353 ILE CD1 HD11 sing N N 354 ILE CD1 HD12 sing N N 355 ILE CD1 HD13 sing N N 356 ILE OXT HXT sing N N 357 LEU N CA sing N N 358 LEU N H sing N N 359 LEU N H2 sing N N 360 LEU CA C sing N N 361 LEU CA CB sing N N 362 LEU CA HA sing N N 363 LEU C O doub N N 364 LEU C OXT sing N N 365 LEU CB CG sing N N 366 LEU CB HB2 sing N N 367 LEU CB HB3 sing N N 368 LEU CG CD1 sing N N 369 LEU CG CD2 sing N N 370 LEU CG HG sing N N 371 LEU CD1 HD11 sing N N 372 LEU CD1 HD12 sing N N 373 LEU CD1 HD13 sing N N 374 LEU CD2 HD21 sing N N 375 LEU CD2 HD22 sing N N 376 LEU CD2 HD23 sing N N 377 LEU OXT HXT sing N N 378 LYS N CA sing N N 379 LYS N H sing N N 380 LYS N H2 sing N N 381 LYS CA C sing N N 382 LYS CA CB sing N N 383 LYS CA HA sing N N 384 LYS C O doub N N 385 LYS C OXT sing N N 386 LYS CB CG sing N N 387 LYS CB HB2 sing N N 388 LYS CB HB3 sing N N 389 LYS CG CD sing N N 390 LYS CG HG2 sing N N 391 LYS CG HG3 sing N N 392 LYS CD CE sing N N 393 LYS CD HD2 sing N N 394 LYS CD HD3 sing N N 395 LYS CE NZ sing N N 396 LYS CE HE2 sing N N 397 LYS CE HE3 sing N N 398 LYS NZ HZ1 sing N N 399 LYS NZ HZ2 sing N N 400 LYS NZ HZ3 sing N N 401 LYS OXT HXT sing N N 402 MET N CA sing N N 403 MET N H sing N N 404 MET N H2 sing N N 405 MET CA C sing N N 406 MET CA CB sing N N 407 MET CA HA sing N N 408 MET C O doub N N 409 MET C OXT sing N N 410 MET CB CG sing N N 411 MET CB HB2 sing N N 412 MET CB HB3 sing N N 413 MET CG SD sing N N 414 MET CG HG2 sing N N 415 MET CG HG3 sing N N 416 MET SD CE sing N N 417 MET CE HE1 sing N N 418 MET CE HE2 sing N N 419 MET CE HE3 sing N N 420 MET OXT HXT sing N N 421 PHE N CA sing N N 422 PHE N H sing N N 423 PHE N H2 sing N N 424 PHE CA C sing N N 425 PHE CA CB sing N N 426 PHE CA HA sing N N 427 PHE C O doub N N 428 PHE C OXT sing N N 429 PHE CB CG sing N N 430 PHE CB HB2 sing N N 431 PHE CB HB3 sing N N 432 PHE CG CD1 doub Y N 433 PHE CG CD2 sing Y N 434 PHE CD1 CE1 sing Y N 435 PHE CD1 HD1 sing N N 436 PHE CD2 CE2 doub Y N 437 PHE CD2 HD2 sing N N 438 PHE CE1 CZ doub Y N 439 PHE CE1 HE1 sing N N 440 PHE CE2 CZ sing Y N 441 PHE CE2 HE2 sing N N 442 PHE CZ HZ sing N N 443 PHE OXT HXT sing N N 444 PPV O11 P1 sing N N 445 PPV O11 H11 sing N N 446 PPV P1 O21 sing N N 447 PPV P1 O31 doub N N 448 PPV P1 OPP sing N N 449 PPV O21 H21 sing N N 450 PPV OPP P2 sing N N 451 PPV P2 O12 sing N N 452 PPV P2 O22 doub N N 453 PPV P2 O32 sing N N 454 PPV O12 H12 sing N N 455 PPV O32 H32 sing N N 456 PRO N CA sing N N 457 PRO N CD sing N N 458 PRO N H sing N N 459 PRO CA C sing N N 460 PRO CA CB sing N N 461 PRO CA HA sing N N 462 PRO C O doub N N 463 PRO C OXT sing N N 464 PRO CB CG sing N N 465 PRO CB HB2 sing N N 466 PRO CB HB3 sing N N 467 PRO CG CD sing N N 468 PRO CG HG2 sing N N 469 PRO CG HG3 sing N N 470 PRO CD HD2 sing N N 471 PRO CD HD3 sing N N 472 PRO OXT HXT sing N N 473 SER N CA sing N N 474 SER N H sing N N 475 SER N H2 sing N N 476 SER CA C sing N N 477 SER CA CB sing N N 478 SER CA HA sing N N 479 SER C O doub N N 480 SER C OXT sing N N 481 SER CB OG sing N N 482 SER CB HB2 sing N N 483 SER CB HB3 sing N N 484 SER OG HG sing N N 485 SER OXT HXT sing N N 486 THR N CA sing N N 487 THR N H sing N N 488 THR N H2 sing N N 489 THR CA C sing N N 490 THR CA CB sing N N 491 THR CA HA sing N N 492 THR C O doub N N 493 THR C OXT sing N N 494 THR CB OG1 sing N N 495 THR CB CG2 sing N N 496 THR CB HB sing N N 497 THR OG1 HG1 sing N N 498 THR CG2 HG21 sing N N 499 THR CG2 HG22 sing N N 500 THR CG2 HG23 sing N N 501 THR OXT HXT sing N N 502 TRP N CA sing N N 503 TRP N H sing N N 504 TRP N H2 sing N N 505 TRP CA C sing N N 506 TRP CA CB sing N N 507 TRP CA HA sing N N 508 TRP C O doub N N 509 TRP C OXT sing N N 510 TRP CB CG sing N N 511 TRP CB HB2 sing N N 512 TRP CB HB3 sing N N 513 TRP CG CD1 doub Y N 514 TRP CG CD2 sing Y N 515 TRP CD1 NE1 sing Y N 516 TRP CD1 HD1 sing N N 517 TRP CD2 CE2 doub Y N 518 TRP CD2 CE3 sing Y N 519 TRP NE1 CE2 sing Y N 520 TRP NE1 HE1 sing N N 521 TRP CE2 CZ2 sing Y N 522 TRP CE3 CZ3 doub Y N 523 TRP CE3 HE3 sing N N 524 TRP CZ2 CH2 doub Y N 525 TRP CZ2 HZ2 sing N N 526 TRP CZ3 CH2 sing Y N 527 TRP CZ3 HZ3 sing N N 528 TRP CH2 HH2 sing N N 529 TRP OXT HXT sing N N 530 TYR N CA sing N N 531 TYR N H sing N N 532 TYR N H2 sing N N 533 TYR CA C sing N N 534 TYR CA CB sing N N 535 TYR CA HA sing N N 536 TYR C O doub N N 537 TYR C OXT sing N N 538 TYR CB CG sing N N 539 TYR CB HB2 sing N N 540 TYR CB HB3 sing N N 541 TYR CG CD1 doub Y N 542 TYR CG CD2 sing Y N 543 TYR CD1 CE1 sing Y N 544 TYR CD1 HD1 sing N N 545 TYR CD2 CE2 doub Y N 546 TYR CD2 HD2 sing N N 547 TYR CE1 CZ doub Y N 548 TYR CE1 HE1 sing N N 549 TYR CE2 CZ sing Y N 550 TYR CE2 HE2 sing N N 551 TYR CZ OH sing N N 552 TYR OH HH sing N N 553 TYR OXT HXT sing N N 554 VAL N CA sing N N 555 VAL N H sing N N 556 VAL N H2 sing N N 557 VAL CA C sing N N 558 VAL CA CB sing N N 559 VAL CA HA sing N N 560 VAL C O doub N N 561 VAL C OXT sing N N 562 VAL CB CG1 sing N N 563 VAL CB CG2 sing N N 564 VAL CB HB sing N N 565 VAL CG1 HG11 sing N N 566 VAL CG1 HG12 sing N N 567 VAL CG1 HG13 sing N N 568 VAL CG2 HG21 sing N N 569 VAL CG2 HG22 sing N N 570 VAL CG2 HG23 sing N N 571 VAL OXT HXT sing N N 572 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3MDA 'double helix' 3MDA 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DC 1 1_555 D DG 4 1_555 0.297 -0.267 0.273 -12.651 -4.705 -0.983 1 T_DC1:DG4_D T 1 ? D 4 ? 19 1 1 B DG 2 1_555 D DC 3 1_555 -0.247 -0.129 -0.200 -2.695 -0.175 2.160 2 T_DG2:DC3_D T 2 ? D 3 ? 19 1 1 B DG 3 1_555 D DC 2 1_555 -0.135 -0.126 -0.013 5.843 -1.022 -0.963 3 T_DG3:DC2_D T 3 ? D 2 ? 19 1 1 B DC 4 1_555 D DG 1 1_555 0.658 -0.221 0.221 13.031 -12.680 2.868 4 T_DC4:DG1_D T 4 ? D 1 ? 19 1 1 B DG 5 1_555 C CAR 7 1_555 -0.370 -0.140 0.173 -2.121 9.240 0.276 5 T_DG5:CAR7_P T 5 ? P 7 ? 19 1 1 B DG 6 1_555 C DC 6 1_555 -0.204 -0.166 0.169 5.195 -2.478 -2.633 6 T_DG6:DC6_P T 6 ? P 6 ? 19 1 1 B DT 7 1_555 C DA 5 1_555 -0.035 -0.184 0.197 -0.687 -19.064 3.986 7 T_DT7:DA5_P T 7 ? P 5 ? 20 1 1 B DA 8 1_555 C DT 4 1_555 -0.113 -0.141 -0.156 -4.427 -4.063 0.277 8 T_DA8:DT4_P T 8 ? P 4 ? 20 1 1 B DC 9 1_555 C DG 3 1_555 0.121 -0.074 0.172 0.142 -8.038 -2.838 9 T_DC9:DG3_P T 9 ? P 3 ? 19 1 1 B DT 10 1_555 C DA 2 1_555 -0.090 -0.225 -0.061 6.082 -8.049 0.547 10 T_DT10:DA2_P T 10 ? P 2 ? 20 1 1 B DG 11 1_555 C DC 1 1_555 -0.234 -0.123 0.697 25.634 -12.562 0.422 11 T_DG11:DC1_P T 11 ? P 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DC 1 1_555 D DG 4 1_555 B DG 2 1_555 D DC 3 1_555 1.067 0.292 3.159 4.020 5.112 27.880 -0.564 -1.250 3.278 10.431 -8.203 28.614 1 TT_DC1DG2:DC3DG4_DD T 1 ? D 4 ? T 2 ? D 3 ? 1 B DG 2 1_555 D DC 3 1_555 B DG 3 1_555 D DC 2 1_555 -0.886 0.134 3.106 -4.802 1.931 35.145 -0.054 0.773 3.198 3.176 7.900 35.512 2 TT_DG2DG3:DC2DC3_DD T 2 ? D 3 ? T 3 ? D 2 ? 1 B DG 3 1_555 D DC 2 1_555 B DC 4 1_555 D DG 1 1_555 0.626 -0.790 3.239 -4.403 3.704 37.114 -1.696 -1.530 3.057 5.777 6.866 37.541 3 TT_DG3DC4:DG1DC2_DD T 3 ? D 2 ? T 4 ? D 1 ? 1 B DG 5 1_555 C CAR 7 1_555 B DG 6 1_555 C DC 6 1_555 -0.486 0.150 3.395 -3.262 11.537 24.160 -2.811 0.158 3.172 25.642 7.251 26.931 4 TT_DG5DG6:DC6CAR7_PP T 5 ? P 7 ? T 6 ? P 6 ? 1 B DG 6 1_555 C DC 6 1_555 B DT 7 1_555 C DA 5 1_555 0.843 -0.676 3.483 -1.157 2.748 32.250 -1.721 -1.726 3.384 4.934 2.077 32.384 5 TT_DG6DT7:DA5DC6_PP T 6 ? P 6 ? T 7 ? P 5 ? 1 B DT 7 1_555 C DA 5 1_555 B DA 8 1_555 C DT 4 1_555 -0.939 -0.516 3.329 0.971 5.687 36.575 -1.579 1.610 3.191 8.993 -1.536 37.012 6 TT_DT7DA8:DT4DA5_PP T 7 ? P 5 ? T 8 ? P 4 ? 1 B DA 8 1_555 C DT 4 1_555 B DC 9 1_555 C DG 3 1_555 -0.845 -0.648 3.224 -2.069 3.030 31.867 -1.709 1.163 3.197 5.496 3.753 32.072 7 TT_DA8DC9:DG3DT4_PP T 8 ? P 4 ? T 9 ? P 3 ? 1 B DC 9 1_555 C DG 3 1_555 B DT 10 1_555 C DA 2 1_555 -0.155 -0.479 3.143 2.660 2.806 31.575 -1.362 0.747 3.067 5.132 -4.865 31.805 8 TT_DC9DT10:DA2DG3_PP T 9 ? P 3 ? T 10 ? P 2 ? 1 B DT 10 1_555 C DA 2 1_555 B DG 11 1_555 C DC 1 1_555 0.532 0.723 2.937 -4.957 10.104 30.966 -0.314 -1.719 2.907 18.188 8.922 32.901 9 TT_DT10DG11:DC1DA2_PP T 10 ? P 2 ? T 11 ? P 1 ? # _atom_sites.entry_id 3MDA _atom_sites.fract_transf_matrix[1][1] 0.017835 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015965 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007135 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C MG N NA O P S # loop_